HHsearch results for GI: 254780584 and protein with PDBid: 2zjr_U
>2zjr_U 50S ribosomal protein L28; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.325.1.1 PDB: 2zjp_U 2zjq_U 3cf5_U* 3dll_U*
Probab=99.83 E-value=9.2e-23 Score=155.70 Aligned_cols=65 Identities=29% Similarity=0.358 Sum_probs=60.5
Q ss_pred CCCCCCCCCCCCCCCCCC-------------CHHHCCCCCEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHH--CCCH
Q ss_conf 985410117855367722-------------3323023742555248999985577868999997245302364--1887
Q gi|254780584|r 1 MSRVCELTKKTVMSGNKV-------------SHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVER--QGGL 65 (97)
Q Consensus 1 Msr~C~itGk~~~~Gn~v-------------shs~~kTkR~~~PNlq~~~~~s~~l~~~v~l~vst~~lrtI~K--~GGl 65 (97)
|||+||+|||+|++||+| |||+++|+|+|+||||++++|+| +++++++|||+|||||+| +.|+
T Consensus 1 Msr~C~i~GK~~~~Gn~v~~~Gkakk~Gg~~shs~~kTkR~f~PNlQ~~~~~~~--g~~v~~kvstk~Lrti~K~~~~~~ 78 (81)
T 2zjr_U 1 MSRECYLTGKKNLVVNSVIRRGKARADGGVGRKTTGITKRVQRANLHKKAIREN--GQVKTVWLSANALRTLSKGPYKGI 78 (81)
T ss_dssp -------CCSSSCCCCCCCCCCEESCCCTTTCSCCEECCCCCCCCCCCCCCCCS--SSCCCCCCCHHHHHHHHSSCCSSC
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEC--CEEEEEEEEHHHHHEECCCCCCCC
T ss_conf 975724368734338565103411114664130477025366467489999889--998999999578020500345671
Q ss_pred HH
Q ss_conf 79
Q gi|254780584|r 66 DR 67 (97)
Q Consensus 66 D~ 67 (97)
|.
T Consensus 79 ~~ 80 (81)
T 2zjr_U 79 EL 80 (81)
T ss_dssp C-
T ss_pred CC
T ss_conf 13