HHSEARCH alignment of GI: 254780584 and SCOP domain: d2qamz1

Alignment

Probab=99.95  E-value=2.7e-29  Score=193.33  Aligned_cols=74  Identities=36%  Similarity=0.590  Sum_probs=71.4

Q ss_pred             CCCCCCCCCCCCCCCCCCHHHCCCCCEECCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHCCCHHHHHHHCCHHH
Q ss_conf             854101178553677223323023742555248999985577868999997245302364188779997298445
Q gi|254780584|r    2 SRVCELTKKTVMSGNKVSHANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGLDRFLSNSKKEN   76 (97)
Q Consensus         2 sr~C~itGk~~~~Gn~vshs~~kTkR~~~PNlq~~~~~s~~l~~~v~l~vst~~lrtI~K~GGlD~yLl~~~~~~   76 (97)
                      ||+||||||+|++||+||||+++|+|+|.||||++++|||+++++|+|+|||+|||||+| ||||+||++++++.
T Consensus         1 Sr~C~itGK~~~~Gn~vShs~~kTkR~~~pNlq~kr~~~~~~~~~v~lkvstk~LRtI~K-~Gld~~l~k~~~~g   74 (77)
T d2qamz1           1 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAELRARG   74 (77)
T ss_dssp             CCCCSSSCCCCCCCBCCBGGGBCCBCCCCCCCCCEECCCSTTCCCCEECCCTTHHHHHTT-SCHHHHHHTTTTTT
T ss_pred             CCCCCCCCCCCCCCCEEEECCCCCCCEECCCEEEEEEEECCCCEEEEEEEEHHHEEEEHH-CCHHHHHHHHHHCC
T ss_conf             988601898545686220036644756646438999998578979999998053324113-79999999999735

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: L28p-like
superfamily: L28p-like
family: Ribosomal protein L28
domain: Ribosomal protein L28 (L28p)
species: Escherichia coli [TaxId: 562]