Query gi|254780585|ref|YP_003064998.1| molecular chaperone DnaJ family protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 191
No_of_seqs 180 out of 6459
Neff 6.0
Searched_HMMs 23785
Date Tue May 31 19:54:58 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780585.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 99.6 5.5E-17 2.3E-21 130.8 0.0 61 127-188 23-83 (329)
2 2ctq_A DNAJ homolog subfamily 99.4 1.1E-13 4.5E-18 109.2 6.2 57 131-187 19-75 (112)
3 1iur_A KIAA0730 protein; DNAJ 99.4 3.3E-13 1.4E-17 106.0 6.4 63 127-189 11-74 (88)
4 2yua_A Williams-beuren syndrom 99.4 3.7E-13 1.5E-17 105.7 6.0 57 131-187 16-72 (99)
5 1fpo_A HSC20, chaperone protei 99.4 4.5E-13 1.9E-17 105.1 6.3 56 133-188 2-64 (171)
6 1bq0_A DNAJ, HSP40; chaperone, 99.4 5.5E-14 2.3E-18 111.1 0.8 55 133-187 4-58 (103)
7 3hho_A CO-chaperone protein HS 99.4 6.1E-13 2.5E-17 104.3 6.1 59 130-188 2-67 (174)
8 2ctw_A DNAJ homolog subfamily 99.4 7.8E-13 3.3E-17 103.6 6.0 64 124-187 9-72 (109)
9 2guz_A Mitochondrial import in 99.3 2.2E-12 9E-17 100.7 6.9 59 128-190 10-69 (71)
10 2qsa_A DNAJ homolog DNJ-2; J-d 99.3 1.5E-12 6.3E-17 101.7 5.5 58 130-187 13-74 (109)
11 1gh6_A Large T antigen; tumor 99.3 8.6E-13 3.6E-17 103.3 4.2 54 130-187 6-61 (114)
12 2dn9_A DNAJ homolog subfamily 99.3 2.8E-12 1.2E-16 99.9 6.8 56 132-187 7-62 (79)
13 3bvo_A CO-chaperone protein HS 99.3 3.9E-12 1.6E-16 99.0 6.1 57 131-187 42-105 (207)
14 1faf_A Large T antigen; J doma 99.2 1.3E-11 5.6E-16 95.5 7.4 55 130-188 9-65 (79)
15 1wjz_A 1700030A21RIK protein; 99.2 5E-12 2.1E-16 98.3 3.8 56 132-187 16-77 (94)
16 2cug_A Mkiaa0962 protein; DNAJ 99.2 1.7E-11 7.2E-16 94.8 5.5 61 127-188 12-72 (88)
17 2ctr_A DNAJ homolog subfamily 99.2 4.6E-11 1.9E-15 92.0 7.2 54 133-187 8-61 (88)
18 2dmx_A DNAJ homolog subfamily 99.2 3E-11 1.3E-15 93.2 6.3 56 132-187 9-65 (92)
19 2o37_A Protein SIS1; HSP40, J- 99.2 2.5E-11 1E-15 93.7 5.7 55 130-187 6-60 (92)
20 2ej7_A HCG3 gene; HCG3 protein 99.2 2.4E-11 1E-15 93.9 5.4 56 132-187 9-65 (82)
21 3ag7_A Putative uncharacterize 99.1 1.1E-11 4.7E-16 96.0 1.9 57 133-189 41-104 (106)
22 1hdj_A Human HSP40, HDJ-1; mol 99.1 5.6E-11 2.3E-15 91.5 5.2 54 133-187 4-57 (77)
23 2ctp_A DNAJ homolog subfamily 99.1 8.7E-11 3.7E-15 90.2 6.0 55 132-187 7-61 (78)
24 2pf4_E Small T antigen; PP2A, 99.1 3.4E-11 1.4E-15 92.9 3.8 59 126-188 4-65 (174)
25 2qwo_B Putative tyrosine-prote 99.1 2.6E-11 1.1E-15 93.6 2.9 55 133-187 34-91 (92)
26 2och_A Hypothetical protein DN 99.0 3.7E-10 1.5E-14 86.1 5.6 53 132-187 8-60 (73)
27 2guz_B Mitochondrial import in 99.0 1E-09 4.4E-14 83.1 7.2 53 131-187 3-58 (65)
28 1n4c_A Auxilin; four helix bun 98.9 5.7E-10 2.4E-14 84.8 4.5 55 134-188 119-176 (182)
29 2ys8_A RAB-related GTP-binding 97.8 5.6E-05 2.4E-09 52.2 7.0 55 132-187 27-81 (90)
30 2pvb_A Protein (parvalbumin); 68.3 6.5 0.00027 19.0 5.9 104 69-180 2-107 (108)
31 2dzj_A Synaptic glycoprotein S 47.0 5.2 0.00022 19.7 1.0 31 135-165 24-55 (88)
32 1dvp_A HRS, hepatocyte growth 47.0 10 0.00042 17.8 2.5 44 142-190 95-138 (220)
33 1elk_A Target of MYB1; superhe 43.9 10 0.00043 17.8 2.1 43 143-190 111-153 (157)
34 1ug2_A 2610100B20RIK gene prod 34.9 20 0.00083 15.9 2.4 21 142-162 66-86 (95)
35 1xkg_A DER P I, major mite fec 33.8 24 0.00099 15.4 3.2 25 57-81 36-60 (312)
36 3ldz_A STAM-1, signal transduc 33.2 24 0.001 15.3 2.8 40 146-190 98-137 (140)
37 1x5b_A Signal transducing adap 29.0 24 0.001 15.3 2.0 42 144-190 107-148 (163)
38 2c0y_A Procathepsin S; proenzy 23.9 35 0.0015 14.3 3.0 27 57-83 40-77 (315)
39 2d8r_A THAP domain-containing 23.4 25 0.001 15.3 1.3 37 21-57 4-47 (99)
40 2co9_A Thymus high mobility gr 22.8 37 0.0015 14.1 3.6 37 41-82 16-52 (102)
41 1zfd_A SWI5; DNA binding motif 22.7 22 0.00093 15.6 0.9 11 27-37 4-14 (32)
42 1fi6_A EH domain protein REPS1 20.8 38 0.0016 14.0 1.8 16 134-153 34-49 (92)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein structure initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.60 E-value=5.5e-17 Score=130.76 Aligned_cols=61 Identities=25% Similarity=0.481 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 88889769986177732889999999999999965788997987999999999999999962
Q gi|254780585|r 127 VGSMQFNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKS 188 (191)
Q Consensus 127 ~~~~~~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~S 188 (191)
.+...++.|+||||+++||.+|||++||+|+++||||+|++ ..||++|++|++||++|...
T Consensus 23 ~~m~~kDyY~iLGV~~~AS~~EIKkAYRkLA~k~HPDkn~~-~~AeekFkeI~eAYevLsD~ 83 (329)
T 3lz8_A 23 NAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDE 83 (329)
T ss_dssp --------------------------------------------------------------
T ss_pred CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHHHHHHHCCH
T ss_conf 76664777898099999799999999999999868898979-46999999999999721034
No 2
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=1.1e-13 Score=109.23 Aligned_cols=57 Identities=28% Similarity=0.338 Sum_probs=53.2
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 976998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 131 QFNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 131 ~~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
..+.|+||||+++++.++||++|++|+++||||+|+++..++++|+.|++||++|.+
T Consensus 19 ~~dyY~iLgv~~~as~~eIk~AYr~l~~~~HPDkn~~~~~a~~~f~~i~~Ay~vLsd 75 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTN 75 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 888088709999959999999999999987849887848999999999999999789
No 3
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.40 E-value=3.3e-13 Score=106.02 Aligned_cols=63 Identities=21% Similarity=0.246 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH-HHHHHHHHHHHHHHHHHCC
Q ss_conf 88889769986177732889999999999999965788997987-9999999999999999628
Q gi|254780585|r 127 VGSMQFNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRG-SEERFQAVIQAYKILKKSG 189 (191)
Q Consensus 127 ~~~~~~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~-~ee~~~~I~~Ay~~Lk~Sg 189 (191)
.....+++|.||||..++|.++||++|++|+++||||+|+++.. ++++|+.|++||++|++-.
T Consensus 11 r~~~~~~~y~vLev~~~as~eeIkkAYrklal~~HPDkn~~~~~~a~~~F~~I~~AYe~L~~~~ 74 (88)
T 1iur_A 11 RGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA 74 (88)
T ss_dssp SSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7267899999929988999999999999999997966589866899999999999999980288
No 4
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=3.7e-13 Score=105.73 Aligned_cols=57 Identities=30% Similarity=0.525 Sum_probs=53.2
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 976998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 131 QFNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 131 ~~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
....|+||||+++++.++||++|++|+++||||+|.++..++++|+.|++||++|.+
T Consensus 16 ~~~~Y~iLgv~~~as~~eIk~aY~~la~~~HPDk~~~~~~~~~~f~~i~~Ay~iL~d 72 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGS 72 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 355998849999969999999999999997965356666899999999999999799
No 5
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.39 E-value=4.5e-13 Score=105.14 Aligned_cols=56 Identities=21% Similarity=0.440 Sum_probs=49.9
Q ss_pred HHHHHHCCCCCCC--HHHHHHHHHHHHHHHCCCCCCCCH-----HHHHHHHHHHHHHHHHHHC
Q ss_conf 6998617773288--999999999999996578899798-----7999999999999999962
Q gi|254780585|r 133 NAFEILGLLSDSS--PEEIRGRYKDLVKKHHPDANGGDR-----GSEERFQAVIQAYKILKKS 188 (191)
Q Consensus 133 ~Al~~Lgl~~~~~--~~~ik~~yk~lvk~~HPD~n~g~~-----~~ee~~~~I~~Ay~~Lk~S 188 (191)
+.|+||||+++++ ..+||++|++|+++||||+|+++. .++++|+.|+.||++|++.
T Consensus 2 dyy~iLgl~~~~~~d~~eIkkaYrkLa~~~HPDk~~~~~~~~~~~a~~~f~~In~AYevL~dp 64 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHP 64 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 758878999999999999999999999986988565520778999999999999999998881
No 6
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.37 E-value=5.5e-14 Score=111.11 Aligned_cols=55 Identities=40% Similarity=0.732 Sum_probs=51.9
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 133 NAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 133 ~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
+-|+||||++++|.++||++||+|+++||||+|.++..++++|++|++||++|.+
T Consensus 4 dyY~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~~F~~I~~Ay~vLsd 58 (103)
T 1bq0_A 4 DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTD 58 (103)
T ss_dssp CSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTC
T ss_pred CHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 7798809999989999999999998662356689988999999999999986189
No 7
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.37 E-value=6.1e-13 Score=104.30 Aligned_cols=59 Identities=24% Similarity=0.406 Sum_probs=50.5
Q ss_pred HHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCHHH-----HHHHHHHHHHHHHHHHC
Q ss_conf 8976998617773--28899999999999999657889979879-----99999999999999962
Q gi|254780585|r 130 MQFNAFEILGLLS--DSSPEEIRGRYKDLVKKHHPDANGGDRGS-----EERFQAVIQAYKILKKS 188 (191)
Q Consensus 130 ~~~~Al~~Lgl~~--~~~~~~ik~~yk~lvk~~HPD~n~g~~~~-----ee~~~~I~~Ay~~Lk~S 188 (191)
...+.|+||||++ +++.++||++|++|+++||||+++++..+ +++|+.|++||++|++.
T Consensus 2 ~~~nyy~iLgl~~~~~~d~~eIkkaYr~La~~~HPDk~~~~~~~ek~~~~~~f~~In~AY~vL~dp 67 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDP 67 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 986879983999889999999999999999984723343202889998999999999999997883
No 8
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.36 E-value=7.8e-13 Score=103.57 Aligned_cols=64 Identities=23% Similarity=0.484 Sum_probs=57.6
Q ss_pred HCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 0158888976998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 124 DHRVGSMQFNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 124 ~~~~~~~~~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+.++....+.|+||||+++|+.++||++|++|+++||||++.+...++++|++|++||++|.+
T Consensus 9 ~r~~~~~~~dyY~iLgV~~~As~~eIk~ay~~l~~~~HPDk~~~~~~~~~~~~~i~~AY~vLsd 72 (109)
T 2ctw_A 9 QRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTD 72 (109)
T ss_dssp CCCTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 5655577889888829899989999999999999980997577788999999989999999789
No 9
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.33 E-value=2.2e-12 Score=100.70 Aligned_cols=59 Identities=20% Similarity=0.340 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 88897699861777328-8999999999999996578899798799999999999999996289
Q gi|254780585|r 128 GSMQFNAFEILGLLSDS-SPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKSGF 190 (191)
Q Consensus 128 ~~~~~~Al~~Lgl~~~~-~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~Sg~ 190 (191)
.....+|+.||||++++ |.++||++|++|+++||||++| + .+.|++|++||++|++-|+
T Consensus 10 ~Mt~~eA~~iLgl~~~a~t~~~Ik~ayr~la~~~HPDk~g-s---~~~~~~i~~Aye~L~~~~~ 69 (71)
T 2guz_A 10 KMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGI 69 (71)
T ss_dssp SCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHCCCCC
T ss_conf 8699999998299999789999999999999987989898-9---9999999999999816143
No 10
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, protein structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.31 E-value=1.5e-12 Score=101.74 Aligned_cols=58 Identities=29% Similarity=0.541 Sum_probs=51.3
Q ss_pred HHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHHHHH
Q ss_conf 897699861777328-8999999999999996578899798---799999999999999996
Q gi|254780585|r 130 MQFNAFEILGLLSDS-SPEEIRGRYKDLVKKHHPDANGGDR---GSEERFQAVIQAYKILKK 187 (191)
Q Consensus 130 ~~~~Al~~Lgl~~~~-~~~~ik~~yk~lvk~~HPD~n~g~~---~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+.+.|+||||++++ |.++||++|++|+++||||+++++. .++++|+.|++||++|.+
T Consensus 13 g~~n~Y~vLgv~~~a~s~~eIk~AYrkla~~~HPDk~~~~~~~~~a~~kf~~I~~AyeiLsd 74 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKD 74 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89984876398999889999999999999998859799946888999999999999999589
No 11
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.31 E-value=8.6e-13 Score=103.30 Aligned_cols=54 Identities=26% Similarity=0.479 Sum_probs=48.1
Q ss_pred HHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 897699861777328--8999999999999996578899798799999999999999996
Q gi|254780585|r 130 MQFNAFEILGLLSDS--SPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 130 ~~~~Al~~Lgl~~~~--~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
...+.|+||||+.+| +..+||++|++|+++||||+|+. +++|++|++||.+|..
T Consensus 6 ~~~~~y~lLGl~~~a~~~~~~IKkAYrkla~~~HPDk~~~----~ekF~~I~eAYevLsd 61 (114)
T 1gh6_A 6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMED 61 (114)
T ss_dssp HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHCC
T ss_conf 7889999919998878899999999999999878674650----2899999999999789
No 12
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=2.8e-12 Score=99.94 Aligned_cols=56 Identities=36% Similarity=0.639 Sum_probs=53.3
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 76998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 132 FNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 132 ~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+.|+||||+++++.++||++|++|+++||||++.++..++++|+.|++||++|.+
T Consensus 7 ~d~Y~iLgv~~~as~~eIk~aYr~l~~~~hPDk~~~~~~a~~~~~~I~~Ay~vL~d 62 (79)
T 2dn9_A 7 GDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSD 62 (79)
T ss_dssp SCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 98698849999949999999999999765866579967999999999999999799
No 13
>3bvo_A CO-chaperone protein HSCB, mitochondrial precursor; structural genomics medical relevance, protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.28 E-value=3.9e-12 Score=99.04 Aligned_cols=57 Identities=25% Similarity=0.325 Sum_probs=49.0
Q ss_pred HHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHCCCCCCCCHH-----HHHHHHHHHHHHHHHHH
Q ss_conf 9769986177732--889999999999999965788997987-----99999999999999996
Q gi|254780585|r 131 QFNAFEILGLLSD--SSPEEIRGRYKDLVKKHHPDANGGDRG-----SEERFQAVIQAYKILKK 187 (191)
Q Consensus 131 ~~~Al~~Lgl~~~--~~~~~ik~~yk~lvk~~HPD~n~g~~~-----~ee~~~~I~~Ay~~Lk~ 187 (191)
..+.|+||||++. ++..+||++|++|+++||||+|.++.. ++++|+.|++||++|++
T Consensus 42 ~~dyy~iLgl~~~~~iD~~eIKkaYr~La~~~HPDk~~~~~~~ek~~a~~~f~~IneAY~~L~D 105 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLA 105 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8887998098988999999999999999998786878764278999899999999999999489
No 14
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.25 E-value=1.3e-11 Score=95.54 Aligned_cols=55 Identities=20% Similarity=0.250 Sum_probs=48.7
Q ss_pred HHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 897699861777328--89999999999999965788997987999999999999999962
Q gi|254780585|r 130 MQFNAFEILGLLSDS--SPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKS 188 (191)
Q Consensus 130 ~~~~Al~~Lgl~~~~--~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~S 188 (191)
...++|+||||++++ +..+||++|++|+++||||++ |+ +++|++|++||++|++.
T Consensus 9 ~~~~~y~iLgl~~~~~~~~~~Ik~aYr~l~~~~HPDk~-~d---~e~~~~i~~Ay~~L~d~ 65 (79)
T 1faf_A 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GS---HALMQELNSLWGTFKTE 65 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS-CC---HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CC---HHHHHHHHHHHHHHCCH
T ss_conf 89999999198988789999999999999998498768-87---99999999999997589
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.22 E-value=5e-12 Score=98.31 Aligned_cols=56 Identities=27% Similarity=0.488 Sum_probs=50.5
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC------HHHHHHHHHHHHHHHHHHH
Q ss_conf 7699861777328899999999999999657889979------8799999999999999996
Q gi|254780585|r 132 FNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGD------RGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 132 ~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~------~~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+.|+||||.++++.++||++|++|+++||||++.++ ..++++|+.|++||++|.+
T Consensus 16 kd~Y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~I~~Ay~vL~d 77 (94)
T 1wjz_A 16 KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGN 77 (94)
T ss_dssp SCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 58398849999959999999999999988867577750267788999999999999999699
No 16
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.19 E-value=1.7e-11 Score=94.79 Aligned_cols=61 Identities=34% Similarity=0.743 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 88889769986177732889999999999999965788997987999999999999999962
Q gi|254780585|r 127 VGSMQFNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKS 188 (191)
Q Consensus 127 ~~~~~~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~S 188 (191)
+.....+.|+||||+++++.++||++|++|+++||||++. +..++++|+.|++||++|.+.
T Consensus 12 ~~~~~~d~Y~iLgv~~~as~~eIkkaY~~l~~~~hPd~~~-~~~~~e~f~~i~~Ay~vLsd~ 72 (88)
T 2cug_A 12 LSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNE 72 (88)
T ss_dssp CCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHHHHHSH
T ss_pred HHCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHCCH
T ss_conf 7614898087779999939999999999999864964479-867999999999999996999
No 17
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=4.6e-11 Score=92.03 Aligned_cols=54 Identities=30% Similarity=0.596 Sum_probs=50.0
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 133 NAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 133 ~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
+-|+||||+++++.++||++|++|++++|||++.+ ..++++|+.|++||++|.+
T Consensus 8 dyY~vLgv~~~As~~eIk~aYr~l~~~~hPd~~~~-~~~~~~~~~i~~Ay~vLsd 61 (88)
T 2ctr_A 8 SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSD 61 (88)
T ss_dssp SHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-HHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-HHHHHHHHHHHHHHHHHCC
T ss_conf 88887499999599999999999970438986554-7699999999999999699
No 18
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=3e-11 Score=93.17 Aligned_cols=56 Identities=36% Similarity=0.733 Sum_probs=51.1
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHHHH
Q ss_conf 76998617773288999999999999996578899798-799999999999999996
Q gi|254780585|r 132 FNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDR-GSEERFQAVIQAYKILKK 187 (191)
Q Consensus 132 ~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~-~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+.|+||||+++++.++||++|++|+++||||++.++. ..+++|+.|++||++|.+
T Consensus 9 ~DyY~iLgv~~~as~~eIk~aYr~~~~~~hPd~~~~~~~~~~~~~~~i~~Ay~vL~d 65 (92)
T 2dmx_A 9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSD 65 (92)
T ss_dssp CCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 789998099999699999999999998848776888679999999999999999399
No 19
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.17 E-value=2.5e-11 Score=93.74 Aligned_cols=55 Identities=27% Similarity=0.615 Sum_probs=49.5
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 8976998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 130 MQFNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 130 ~~~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
++.+.|+||||++++|.++||++|++|++++|||+|.++ +++|+.|++||++|.+
T Consensus 6 ~d~~yY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~---~e~f~~i~~Ay~vLsD 60 (92)
T 2o37_A 6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILND 60 (92)
T ss_dssp SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTS
T ss_pred CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHCC
T ss_conf 534199994999995999999999998654188665899---9999999999999699
No 20
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=2.4e-11 Score=93.87 Aligned_cols=56 Identities=34% Similarity=0.648 Sum_probs=50.9
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHHHHH
Q ss_conf 76998617773288999999999999996578899798-799999999999999996
Q gi|254780585|r 132 FNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDR-GSEERFQAVIQAYKILKK 187 (191)
Q Consensus 132 ~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~-~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+.|+||||+++++.++||++|++|+++||||++.++. .++++|++|++||++|.+
T Consensus 9 ~dyY~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~I~~Ay~iL~d 65 (82)
T 2ej7_A 9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSD 65 (82)
T ss_dssp CCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSS
T ss_pred CCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 538998299999699999999999998768576845799999999999999999798
No 21
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.12 E-value=1.1e-11 Score=96.02 Aligned_cols=57 Identities=18% Similarity=0.289 Sum_probs=50.4
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-------HHHHHHHHHHHHHHHHHHHCC
Q ss_conf 699861777328899999999999999657889979-------879999999999999999628
Q gi|254780585|r 133 NAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGD-------RGSEERFQAVIQAYKILKKSG 189 (191)
Q Consensus 133 ~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~-------~~~ee~~~~I~~Ay~~Lk~Sg 189 (191)
..|++|||...++.++||++|++|+++||||++.+. ..++++|+.|++||++|+++|
T Consensus 41 ~~~~~Lgl~~~~~~~eIKkaYrkl~~~~HPDk~~~~~~~~e~~~~A~~~F~~I~eAYe~~~~~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGSCSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 5582078765589999999999999998957688986227889999999999999999986348
No 22
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.11 E-value=5.6e-11 Score=91.46 Aligned_cols=54 Identities=35% Similarity=0.672 Sum_probs=49.2
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 133 NAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 133 ~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
+-|+||||++++|.++|+++|++|++++|||++.. ..++++|+.|++||++|.+
T Consensus 4 d~Y~vLgv~~~as~~eIk~ay~~l~~~~hPD~~~~-~~~~~~~~~i~~Ay~vL~d 57 (77)
T 1hdj_A 4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSD 57 (77)
T ss_dssp CSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTC
T ss_pred CHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHHHCC
T ss_conf 75988599999599999999999998527102698-4099999999999999789
No 23
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=8.7e-11 Score=90.19 Aligned_cols=55 Identities=36% Similarity=0.628 Sum_probs=50.0
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 76998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 132 FNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 132 ~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+.|+||||+++++.++||++|++|+++||||++.+ ..++++|+.|++||++|..
T Consensus 7 ~dyY~vLgv~~~as~~eIk~aY~~l~~~~hPDk~~~-~~~~~~f~~i~~Ay~iL~d 61 (78)
T 2ctp_A 7 GDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSN 61 (78)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS-HHHHHHHHHHHHHHHHHTS
T ss_pred CCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHCC
T ss_conf 984887298999499999999999997508645798-6499999999999999089
No 24
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulator/viral protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.11 E-value=3.4e-11 Score=92.89 Aligned_cols=59 Identities=24% Similarity=0.441 Sum_probs=49.0
Q ss_pred CCCHH-HHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 58888-97699861777328--89999999999999965788997987999999999999999962
Q gi|254780585|r 126 RVGSM-QFNAFEILGLLSDS--SPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKS 188 (191)
Q Consensus 126 ~~~~~-~~~Al~~Lgl~~~~--~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~S 188 (191)
.++.. ..++|++|||+.++ +..+||++|++|+++||||++|. +++|++|++||++|++.
T Consensus 4 ~L~r~e~~~ly~lLgl~~~~~~~~~~Ik~ayr~l~~~~HPDk~~~----~e~f~~i~~Ay~~L~d~ 65 (174)
T 2pf4_E 4 VLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDG 65 (174)
T ss_dssp TSCHHHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHHHHCCH
T ss_conf 012347888999909998988899999999999999979885753----99999999999996999
No 25
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphorylation; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.09 E-value=2.6e-11 Score=93.62 Aligned_cols=55 Identities=18% Similarity=0.336 Sum_probs=50.2
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHHHHH
Q ss_conf 6998617773288999999999999996578899798---799999999999999996
Q gi|254780585|r 133 NAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDR---GSEERFQAVIQAYKILKK 187 (191)
Q Consensus 133 ~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~---~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+|.+|||...++.++||++|+++++.||||++.++. .+++.|+.|++||++|++
T Consensus 34 ~~~~~Lg~~~~~t~~eIKkaYrk~~~~~HPDk~~~~~~~~~A~~~f~~i~~Aye~~~~ 91 (92)
T 2qwo_B 34 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 7883578666699999999999999987977689977899999999999999999855
No 26
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, PSI-2, protein structure initiative; 1.86A {Caenorhabditis elegans}
Probab=99.00 E-value=3.7e-10 Score=86.09 Aligned_cols=53 Identities=32% Similarity=0.662 Sum_probs=47.6
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 76998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 132 FNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 132 ~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+-|+||||+++++.++|+++|++|++++|||++++ ++++|+.|++||++|.+
T Consensus 8 ~dyY~iLgv~~~as~~eIk~aYr~l~~~~hPD~~~~---~~~~~~~i~~Ay~vL~d 60 (73)
T 2och_A 8 TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD---GAEQFKQISQAYEVLSD 60 (73)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT---CHHHHHHHHHHHHHHTS
T ss_pred CCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHHCC
T ss_conf 779998198999599999999999989879699988---99999999999999699
No 27
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1e-09 Score=83.15 Aligned_cols=53 Identities=23% Similarity=0.247 Sum_probs=47.1
Q ss_pred HHHHHHHHCCCC---CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 976998617773---288999999999999996578899798799999999999999996
Q gi|254780585|r 131 QFNAFEILGLLS---DSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 131 ~~~Al~~Lgl~~---~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
..+|+.||||++ +++.++|+++|++|++++|||+ ||+. ..+++|++||++|.+
T Consensus 3 ~~EA~~ILgl~~~~~~~~~~~I~~ayr~L~~~~hPD~-GGs~---yl~~kI~~A~e~L~~ 58 (65)
T 2guz_B 3 LDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEK-GGSF---YLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGG-TCCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-CCCH---HHHHHHHHHHHHHHH
T ss_conf 9999999689866553899999999999999649877-9999---999999999999989
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.94 E-value=5.7e-10 Score=84.83 Aligned_cols=55 Identities=20% Similarity=0.382 Sum_probs=49.3
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHHHHHC
Q ss_conf 998617773288999999999999996578899798---7999999999999999962
Q gi|254780585|r 134 AFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDR---GSEERFQAVIQAYKILKKS 188 (191)
Q Consensus 134 Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~---~~ee~~~~I~~Ay~~Lk~S 188 (191)
.|++|||...++.++||++|++|++.+|||++.+.. .+++.|+.|++||++|++.
T Consensus 119 ~~~~l~~~~l~~~~~VK~aYrk~~~~~HPDk~~~~~~~~~a~~~F~~l~~Ay~~l~~~ 176 (182)
T 1n4c_A 119 KWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQ 176 (182)
T ss_dssp CCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 8855675666899999999999999869665899578999999999999999997899
No 29
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.79 E-value=5.6e-05 Score=52.16 Aligned_cols=55 Identities=33% Similarity=0.538 Sum_probs=47.7
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 76998617773288999999999999996578899798799999999999999996
Q gi|254780585|r 132 FNAFEILGLLSDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKK 187 (191)
Q Consensus 132 ~~Al~~Lgl~~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~ 187 (191)
.+.++.||+.|.++.++|.++|++|+.-+|||+.- -+.+|+.|+.|+.|-..|.+
T Consensus 27 kdswdmlgvkpgasrdevnkayrklavllhpdkcv-apgsedafkavvnartallk 81 (90)
T 2ys8_A 27 KDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLK 81 (90)
T ss_dssp SSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHHHH
T ss_conf 41188747788856889999999888750664345-88958899999999999998
No 30
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=68.27 E-value=6.5 Score=19.03 Aligned_cols=104 Identities=13% Similarity=0.202 Sum_probs=46.0
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH-HHHHHCCC-CCCCH
Q ss_conf 30159989999999631137765555654210121011000013333333321000158888976-99861777-32889
Q gi|254780585|r 69 YFLGLSDDEVGRYQKEGVTGERFTWTAHLYAERYPSNSSFFQDHRSSYGHFADRPDHRVGSMQFN-AFEILGLL-SDSSP 146 (191)
Q Consensus 69 yF~gms~~ei~~~~r~~~tw~RPTw~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-Al~~Lgl~-~~~~~ 146 (191)
-|.|||+++|.+.+...-....-... .--................|..+..-....++..+.. +|..|+.. ...+.
T Consensus 2 ~~~gls~~di~~~~~~~~~~~si~f~--eF~~~~~l~~~~~~el~~aF~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~ 79 (108)
T 2pvb_A 2 SFAGLKDADVAAALAACSAADSFKHK--EFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTD 79 (108)
T ss_dssp CCTTSCHHHHHHHHHHTCSTTCCCHH--HHHHHHTGGGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCH
T ss_pred CCCCCCHHHHHHHHHCCCCCCCCCHH--HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCH
T ss_conf 74689999999999704789986799--9999982447999999999998878999926099999999985425543013
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9999999999999657889979879999999999
Q gi|254780585|r 147 EEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQ 180 (191)
Q Consensus 147 ~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~ 180 (191)
.++. ++...+-+|.+| .-.-+.|..+..
T Consensus 80 ~e~~----~l~~~~D~d~dG--~I~~~EF~~~m~ 107 (108)
T 2pvb_A 80 AETK----AFLADGDKDGDG--MIGVDEFAAMIK 107 (108)
T ss_dssp HHHH----HHHHHHCTTCSS--SBCHHHHHHHHH
T ss_pred HHHH----HHHHHHCCCCCC--CEEHHHHHHHHC
T ss_conf 9999----999981999999--284999999972
No 31
>2dzj_A Synaptic glycoprotein SC2; ubiquitin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.04 E-value=5.2 Score=19.69 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=27.0
Q ss_pred HHHH-CCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9861-777328899999999999999657889
Q gi|254780585|r 135 FEIL-GLLSDSSPEEIRGRYKDLVKKHHPDAN 165 (191)
Q Consensus 135 l~~L-gl~~~~~~~~ik~~yk~lvk~~HPD~n 165 (191)
+-+| .|++++|..+||+.+.++-++|+|.+.
T Consensus 24 l~~ld~V~~~aTV~dlK~~~~k~~pk~yp~RQ 55 (88)
T 2dzj_A 24 LCFLDKVEPHATIAEIKNLFTKTHPQWYPARQ 55 (88)
T ss_dssp CEEEEEECSSCBHHHHHHHHHHHCSSSCTTTC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCCCCCEE
T ss_conf 89984579988099999999987789983316
No 32
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=46.96 E-value=10 Score=17.80 Aligned_cols=44 Identities=23% Similarity=0.379 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 3288999999999999996578899798799999999999999996289
Q gi|254780585|r 142 SDSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKSGF 190 (191)
Q Consensus 142 ~~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~Sg~ 190 (191)
.+.+..+||.+-.+|+..|-=+- .+++ .|..|.++|+.|+..|+
T Consensus 95 ~~~~~~~Vk~kil~li~~W~~~f-~~~~----~l~~i~~~Y~~Lk~~G~ 138 (220)
T 1dvp_A 95 ESTPHENVRQKMLELVQTWAYAF-RSSD----KYQAIKDTMTILKAKGH 138 (220)
T ss_dssp HHCSCHHHHHHHHHHHHHHHHHT-TTCS----SCCHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHC-CCCC----CCHHHHHHHHHHHHCCC
T ss_conf 48885589999999999999981-7874----33699999999997676
No 33
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=43.90 E-value=10 Score=17.76 Aligned_cols=43 Identities=14% Similarity=0.372 Sum_probs=32.5
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 288999999999999996578899798799999999999999996289
Q gi|254780585|r 143 DSSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKSGF 190 (191)
Q Consensus 143 ~~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~Sg~ 190 (191)
..+..+||.+-.+|+..|+=.- .+++ .+..|.++|+.|++.|+
T Consensus 111 ~~~~~~Vk~kil~li~~W~~~f-~~~~----~l~~i~~~Y~~L~~~G~ 153 (157)
T 1elk_A 111 NNPPTIVHDKVLNLIQSWADAF-RSSP----DLTGVVTIYEDLRRKGL 153 (157)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHH-TTCT----TCHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHH-CCCC----CCHHHHHHHHHHHHCCC
T ss_conf 8961999999999999999987-6687----66699999999998689
No 34
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=34.90 E-value=20 Score=15.89 Aligned_cols=21 Identities=24% Similarity=0.654 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHHHHHHHHHCC
Q ss_conf 328899999999999999657
Q gi|254780585|r 142 SDSSPEEIRGRYKDLVKKHHP 162 (191)
Q Consensus 142 ~~~~~~~ik~~yk~lvk~~HP 162 (191)
++=+..+||.+|+.|++.+|=
T Consensus 66 ~~Rt~~q~k~R~~~Llk~~~~ 86 (95)
T 1ug2_A 66 GNKTPVEVSHRFRELMQLFHT 86 (95)
T ss_dssp SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999998875
No 35
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, inactive mutant, Pro peptide; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=33.84 E-value=24 Score=15.37 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=22.1
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9999862024873015998999999
Q gi|254780585|r 57 LDHVKKYNKGYNYFLGLSDDEVGRY 81 (191)
Q Consensus 57 leHvreyNk~wnyF~gms~~ei~~~ 81 (191)
+.+|.++|+.=|=|++|+.+|+.+.
T Consensus 36 ~~~I~~~n~~iN~fsDlt~eEf~~~ 60 (312)
T 1xkg_A 36 VKYVQSNGGAINHLSDLSLDEFKNR 60 (312)
T ss_dssp HHHHHHHCCCCCTTTTSCHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 9999985237685768999999998
No 36
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens}
Probab=33.22 E-value=24 Score=15.31 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999996578899798799999999999999996289
Q gi|254780585|r 146 PEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKSGF 190 (191)
Q Consensus 146 ~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~Sg~ 190 (191)
..+||.+-..|+..|.=. .+++++ +..|..+|+.|+..|+
T Consensus 98 ~~~Vk~kil~li~~W~~~-f~~~p~----~~~i~~~Y~~Lk~~G~ 137 (140)
T 3ldz_A 98 HPKVCEKLKALMVEWTDE-FKNDPQ----LSLISAMIKNLKEQGV 137 (140)
T ss_dssp CHHHHHHHHHHHHHHHHH-HTTCGG----GTHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHH-HCCCCC----CHHHHHHHHHHHHCCC
T ss_conf 878999999999999998-288986----6699999999998789
No 37
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.96 E-value=24 Score=15.34 Aligned_cols=42 Identities=17% Similarity=0.302 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 88999999999999996578899798799999999999999996289
Q gi|254780585|r 144 SSPEEIRGRYKDLVKKHHPDANGGDRGSEERFQAVIQAYKILKKSGF 190 (191)
Q Consensus 144 ~~~~~ik~~yk~lvk~~HPD~n~g~~~~ee~~~~I~~Ay~~Lk~Sg~ 190 (191)
.+...|+.+-.+|+..|.=+- .++. .+..|..+|+.||..|+
T Consensus 107 ~~~~~Vk~kil~li~~W~~~f-~~~~----~~~~i~~~y~~Lk~~G~ 148 (163)
T 1x5b_A 107 KAHPKVCEKLKSLMVEWSEEF-QKDP----QFSLISATIKSMKEEGI 148 (163)
T ss_dssp TCCHHHHHHHHHHHHHHHHHT-TTCS----TTHHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHH-CCCC----CCHHHHHHHHHHHHHCC
T ss_conf 998689999999999999984-7897----65399999999998189
No 38
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=23.87 E-value=35 Score=14.25 Aligned_cols=27 Identities=26% Similarity=0.241 Sum_probs=20.6
Q ss_pred HHHHHHHHC-----------CCCCCCCCCHHHHHHHHH
Q ss_conf 999986202-----------487301599899999996
Q gi|254780585|r 57 LDHVKKYNK-----------GYNYFLGLSDDEVGRYQK 83 (191)
Q Consensus 57 leHvreyNk-----------~wnyF~gms~~ei~~~~r 83 (191)
+..|.+.|+ ..|-|++|+.+|+....-
T Consensus 40 ~~~I~~~N~~~~~~~~~~~~g~N~faDlt~eEf~~~~~ 77 (315)
T 2c0y_A 40 LKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMS 77 (315)
T ss_dssp HHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH
T ss_conf 99999998750046777686044423357477653210
No 39
>2d8r_A THAP domain-containing protein 2; NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.16
Probab=23.42 E-value=25 Score=15.26 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=25.1
Q ss_pred CCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCHHHHHHH
Q ss_conf 5334887678647576-------585217888887443589999
Q gi|254780585|r 21 APSPKSSICQWDNCQC-------IGEYRAPVGSGAEEQFFLFCL 57 (191)
Q Consensus 21 ~~~~~~r~C~~~gC~~-------~G~yrAPksr~~l~~y~wFCl 57 (191)
......+.|-.+||.. ..-|+-|+.+..+.+|..+|.
T Consensus 4 ~~~~M~~~C~v~~C~~~~~~~~~i~ff~FPkd~~~~~~W~~~~~ 47 (99)
T 2d8r_A 4 GSSGMPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVR 47 (99)
T ss_dssp CCCCCCCCCCSSSCCCSCCSSCCCCCEECCSSHHHHHHHHHHTT
T ss_pred CCCCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHC
T ss_conf 66899981584999898777999789879899899999999826
No 40
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.77 E-value=37 Score=14.12 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=23.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 178888874435899999998620248730159989999999
Q gi|254780585|r 41 RAPVGSGAEEQFFLFCLDHVKKYNKGYNYFLGLSDDEVGRYQ 82 (191)
Q Consensus 41 rAPksr~~l~~y~wFCleHvreyNk~wnyF~gms~~ei~~~~ 82 (191)
.+|+-+ +.-|+.||.+|-.++-.. +-+|+..||...+
T Consensus 16 ~~PKrP--~say~lF~~e~r~~~k~~---~P~~~~~ei~k~l 52 (102)
T 2co9_A 16 NEPQKP--VSAYALFFRDTQAAIKGQ---NPNATFGEVSKIV 52 (102)
T ss_dssp CSCCCC--CCHHHHTHHHHHHHHHHH---CTTSCHHHHHHHH
T ss_pred CCCCCC--CCHHHHHHHHHHHHHHHH---CCCCCHHHHHHHH
T ss_conf 999999--879999999999999864---8899999999999
No 41
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=22.66 E-value=22 Score=15.56 Aligned_cols=11 Identities=18% Similarity=0.498 Sum_probs=8.4
Q ss_pred CCCCCCCCCCC
Q ss_conf 76786475765
Q gi|254780585|r 27 SICQWDNCQCI 37 (191)
Q Consensus 27 r~C~~~gC~~~ 37 (191)
=.|+|+||.+.
T Consensus 4 f~C~~~gC~k~ 14 (32)
T 1zfd_A 4 YSCDHPGCDKA 14 (32)
T ss_dssp BCCCCTTCCCC
T ss_pred EECCCCCCCCE
T ss_conf 57978998977
No 42
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=20.80 E-value=38 Score=14.04 Aligned_cols=16 Identities=19% Similarity=0.046 Sum_probs=6.1
Q ss_pred HHHHHCCCCCCCHHHHHHHH
Q ss_conf 99861777328899999999
Q gi|254780585|r 134 AFEILGLLSDSSPEEIRGRY 153 (191)
Q Consensus 134 Al~~Lgl~~~~~~~~ik~~y 153 (191)
.|.-.||+ .++++.-+
T Consensus 34 ~l~~s~l~----~~~l~~iw 49 (92)
T 1fi6_A 34 FFTKSKLP----ILELSHIW 49 (92)
T ss_dssp HHHHHSSC----HHHHHHHH
T ss_pred HHHHHCCC----HHHHHHHH
T ss_conf 99883898----99999999
Done!