HHSEARCH alignment of GI: 254780585 and SCOP domain: d1fpoa1

Alignment

Probab=98.97  E-value=4.9e-10  Score=83.73  Aligned_cols=55  Identities=22%  Similarity=0.448  Sum_probs=46.9

Q ss_pred             HHHHHHCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCCH-----HHHHHHHHHHHHHHHHHH
Q ss_conf             699861777328--8999999999999996578899798-----799999999999999996
Q gi|254780585|r  133 NAFEILGLLSDS--SPEEIRGRYKDLVKKHHPDANGGDR-----GSEERFQAVIQAYKILKK  187 (191)
Q Consensus       133 ~Al~~Lgl~~~~--~~~~ik~~yk~lvk~~HPD~n~g~~-----~~ee~~~~I~~Ay~~Lk~  187 (191)
                      +.|++|||+.++  +.++||++|++|+++||||++.+..     .+++.|+.|++||++|++
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~d   63 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRH   63 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             86888799999998999999999999998482004421389999899999999999999199

SCOP domain information

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]