HHsearch alignment of GI: 254780586 and MMDB domain: 1ny8_A_
>1ny8_A (A:) Protein YRBA; structure, autoassign, autostructure, NESG, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli}
Probab=99.94 E-value=1.9e-27 Score=168.88 Aligned_cols=82 Identities=26% Similarity=0.408 Sum_probs=75.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCC-C
Q ss_conf 514199999999984199517999950656888777778998508999998203479988899999999999983378-2
Q gi|254780586|r 4 CHTSLINRITEKIRIALSPDDLQVINESHLHVGHQPQFNGLGETHIRIKIVSPTFTGISKTFRHRKIYDLLHKEIKEE-L 82 (101)
Q Consensus 4 ~~~~~~~~I~~kL~~~l~~~~i~V~D~S~~H~gH~~~~~~~~~sHf~i~IvS~~F~g~s~i~rHr~V~~~L~~e~~~~-i 82 (101)
.+|...++|+++|++.|++..++|+|+ ++||+|+|||+.|+|+++|+|||+||++|+++|+++ |
T Consensus 3 ~~~~~~~~I~~~L~~~l~~~~v~V~gd---------------~~hf~i~IvS~~F~Gks~v~RhrlVy~~L~~~i~~g~I 67 (97)
T 1ny8_A 3 EDPMENNEIQSVLMNALSLQEVHVSGD---------------GSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRI 67 (97)
T ss_dssp CCCCCCHHHHHHHHHHHCCSEEEEEES---------------SSEEEEEEESSTTSSSCHHHHHHHHHTTTHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEECC---------------CCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 375789999999995399818999689---------------84899999807768998899999999999998658972
Q ss_pred EEEEEECCCHHHHHHHHC
Q ss_conf 287776076899998533
Q gi|254780586|r 83 HALSIEAFSPDEKHTLKN 100 (101)
Q Consensus 83 HAlsik~~tp~E~~~~k~ 100 (101)
|||+|+||||+||++++.
T Consensus 68 HAlsi~t~tp~Ew~~~~~ 85 (97)
T 1ny8_A 68 HAVSIKAYTPAEWARDRK 85 (97)
T ss_dssp SEEEEEECCHHHHHHHHH
T ss_pred EEEEEEECCHHHHHHHCC
T ss_conf 433868389999998600