HHSEARCH alignment of GI: 254780586 and SCOP domain: d1ny8a_

Alignment
>d1ny8a_ d.52.6.1 (A:) Hypothetical protein YrbA {Escherichia coli [TaxId: 562]}
Probab=99.92  E-value=1.8e-25  Score=155.96  Aligned_cols=77  Identities=27%  Similarity=0.450  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCC-CCEEEEE
Q ss_conf             999999998419951799995065688877777899850899999820347998889999999999998337-8228777
Q gi|254780586|r    9 INRITEKIRIALSPDDLQVINESHLHVGHQPQFNGLGETHIRIKIVSPTFTGISKTFRHRKIYDLLHKEIKE-ELHALSI   87 (101)
Q Consensus         9 ~~~I~~kL~~~l~~~~i~V~D~S~~H~gH~~~~~~~~~sHf~i~IvS~~F~g~s~i~rHr~V~~~L~~e~~~-~iHAlsi   87 (101)
                      .++|+++|.++|+++.++|.+               +++||+|+|||+.|+|+|+|+|||+||++|+++|++ .||||+|
T Consensus         8 ~~eI~~~L~~~l~~~~v~V~g---------------~g~hf~i~IvS~~F~g~s~v~RHr~Vy~~L~~~i~~g~IHAlsi   72 (97)
T d1ny8a_           8 NNEIQSVLMNALSLQEVHVSG---------------DGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSI   72 (97)
T ss_dssp             CHHHHHHHHHHHCCSEEEEEE---------------SSSEEEEEEESSTTSSSCHHHHHHHHHTTTHHHHHHHTTSEEEE
T ss_pred             HHHHHHHHHHHCCCCEEEEEC---------------CCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             999999999539974899957---------------98579999983776899889999999999999874797331175


Q ss_pred             ECCCHHHHHHHHC
Q ss_conf             6076899998533
Q gi|254780586|r   88 EAFSPDEKHTLKN  100 (101)
Q Consensus        88 k~~tp~E~~~~k~  100 (101)
                      +|+||+||++.|.
T Consensus        73 kt~Tp~Ew~~~kk   85 (97)
T d1ny8a_          73 KAYTPAEWARDRK   85 (97)
T ss_dssp             EECCHHHHHHHHH
T ss_pred             EECCHHHHHHHHH
T ss_conf             7289999998610


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: BolA-like
family: BolA-like
domain: Hypothetical protein YrbA
species: Escherichia coli [TaxId: 562]