HHSEARCH alignment of GI: 254780586 and SCOP domain: d1v9ja_

Alignment
>d1v9ja_ d.52.6.1 (A:) BolA-like protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95  E-value=2.5e-29  Score=176.95  Aligned_cols=86  Identities=22%  Similarity=0.381  Sum_probs=78.1

Q ss_pred             CCCH-HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             5141-999999999841995179999506568887777789985089999982034799888999999999999833782
Q gi|254780586|r    4 CHTS-LINRITEKIRIALSPDDLQVINESHLHVGHQPQFNGLGETHIRIKIVSPTFTGISKTFRHRKIYDLLHKEIKEEL   82 (101)
Q Consensus         4 ~~~~-~~~~I~~kL~~~l~~~~i~V~D~S~~H~gH~~~~~~~~~sHf~i~IvS~~F~g~s~i~rHr~V~~~L~~e~~~~i   82 (101)
                      ..|+ ..+.|+++|+++|+|.+++|+|+|+.|          +++||+|+|||+.|.|+++|+|||+||++|+++|+ +|
T Consensus        26 ~~m~~~~e~I~~kL~~~~~~~~leV~D~S~~h----------~G~Hf~i~IvS~~F~g~s~v~rHr~Vy~~L~~ei~-~i   94 (113)
T d1v9ja_          26 ATMELSADYLREKLRQDLEAEHVEVEDTTLNR----------CATSFRVLVVSAKFEGKPLLQRHRLVNECLAEELP-HI   94 (113)
T ss_dssp             SSSSSCHHHHHHHHHHHHTCSEEEEEECCSSS----------SCCCEEEEEECSHHHHSCHHHHHHHHHHHTTTTGG-GC
T ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC----------CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH-CC
T ss_conf             77763699999999844898379999667899----------87059999986021477440788947999999972-04


Q ss_pred             EEEEEECCCHHHHHHHHC
Q ss_conf             287776076899998533
Q gi|254780586|r   83 HALSIEAFSPDEKHTLKN  100 (101)
Q Consensus        83 HAlsik~~tp~E~~~~k~  100 (101)
                      |||+|+|+||+||++.+.
T Consensus        95 HAlsi~t~Tp~Ew~~~~~  112 (113)
T d1v9ja_          95 HAFEQKTLTPEQWTRQRR  112 (113)
T ss_dssp             SSEEEEEECHHHHHHSCC
T ss_pred             EEEEEEECCHHHHHHHHC
T ss_conf             204878189999987535


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: BolA-like
family: BolA-like
domain: BolA-like protein
species: Mouse (Mus musculus) [TaxId: 10090]