HHsearch alignment for GI: 254780588 and conserved domain: PRK08139

Probab=97.75  E-value=0.0064  Score=41.77  Aligned_cols=162  Identities=14%  Similarity=0.229  Sum_probs=97.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECCCCC-CCCCCCC----------HHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             7768368999999999999719-9489999535324-6778430----------02799999998886237998899996
Q gi|254780588|r  130 GSPRPEGYRKAVRLMEMADRFK-IPVISFIDTAGAY-PGVDAEA----------RGQGEAIARATEMCLKLQVPILSIII  197 (317)
Q Consensus       130 G~~~p~g~rKa~r~~~~A~~f~-lPiv~lvDtpGa~-~g~~aE~----------~G~~~aia~~l~~~~~~~vP~i~vv~  197 (317)
T Consensus        32 Nal~~~m~~el~~~l~~~~~d~~vr~vvltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIaav~  111 (265)
T PRK08139         32 NALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRADPGLAYFRALFARCSRVMQAIVALPQPVIARVH  111 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             89899999999999999975899359999679986427878689755567788999999999999999859998999977


Q ss_pred             CCCCCCCCCCCCCCCCEEEECCCCEEEECHHH-----HHHH---HCCC--CHHHHH-HHHHCCCCHHHHHHCCCCCEEEC
Q ss_conf             16777754211332000220467401215544-----2244---2156--012256-55420388489997899652622
Q gi|254780588|r  198 GEGGSGGAMGIAAANFVYMLEHAIYSVISPEG-----AASI---LWRD--SSRAAQ-AAIAMKIIATDLQDLSIIDGIIP  266 (317)
Q Consensus       198 geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg-----~AsI---Lwkd--~~~a~e-AAealklTa~DL~~lGiID~II~  266 (317)
T Consensus       112 G~a~GgG~~lal~~D~~ias~~a~f~~--pe~~~Gl~~~~~~~~L~r~ig~~~a~~l~ltg~~~~A~eA~~~Glv~~vv~  189 (265)
T PRK08139        112 GIATAAGCQLVASCDLAVAADTARFAV--PGVNIGLFCSTPMVALSRNVPRKQAMEMLLTGEFIDAATAREWGLVNRVVP  189 (265)
T ss_pred             CEEEEEECHHHCCCCEEEECCCCCCCC--CCCEECCCCCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEECC
T ss_conf             823541401100476645326522038--655366255762654401000888899986478406999998798047628


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf             8898444898999999999999999998589989999999
Q gi|254780588|r  267 EPIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIREHR  306 (317)
Q Consensus       267 EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~~R  306 (317)
T Consensus       190 ~-------------~~l~~~a~~~a~~la~~~p~a~~~~K  216 (265)
T PRK08139        190 A-------------DALDAAVARLAAVIAAKSPAAVRIGK  216 (265)
T ss_pred             H-------------HHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf             7-------------79999999999999807999999999