HHsearch alignment for GI: 254780588 and conserved domain: PRK08260

Probab=97.24  E-value=0.0043  Score=43.02  Aligned_cols=88  Identities=23%  Similarity=0.209  Sum_probs=63.9

Q ss_pred             HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHH-HCC--CCHHHHH-HHHHCC
Q ss_conf             998886237998899996167777542113320002204674012------155442244-215--6012256-554203
Q gi|254780588|r  180 RATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASI-LWR--DSSRAAQ-AAIAMK  249 (317)
Q Consensus       180 ~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsI-Lwk--d~~~a~e-AAealk  249 (317)
T Consensus       101 ~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~f~~~~~~~Gl~p~~g~~~~L~rlvG~~~A~el~ltG~~  180 (293)
T PRK08260        101 RVTLRIFDCLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGISTALEWVYSGRV  180 (293)
T ss_pred             HHHHHHHHCCCCEEEEECCEEEHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCC
T ss_conf             99999984899889998898512658987603600102478873666561568775399999999799999999975894


Q ss_pred             CCHHHHHHCCCCCEEECC
Q ss_conf             884899978996526228
Q gi|254780588|r  250 IIATDLQDLSIIDGIIPE  267 (317)
Q Consensus       250 lTa~DL~~lGiID~II~E  267 (317)
T Consensus       181 i~A~eA~~~GlV~~vv~~  198 (293)
T PRK08260        181 FDAQEALDGGLVRSVHPP  198 (293)
T ss_pred             CCHHHHHHCCCEEEECCH
T ss_conf             669999877954567581