HHsearch alignment for GI: 254780588 and conserved domain: PRK11730

Probab=95.28  E-value=0.046  Score=35.72  Aligned_cols=89  Identities=19%  Similarity=0.242  Sum_probs=56.6

Q ss_pred             HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHC-C--CCHHHHH-HHHH
Q ss_conf             99998886237998899996167777542113320002204674012------15544224421-5--6012256-5542
Q gi|254780588|r  178 IARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILW-R--DSSRAAQ-AAIA  247 (317)
Q Consensus       178 ia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILw-k--d~~~a~e-AAea  247 (317)
T Consensus        91 ~~~~~~~ie~~~kPvIAAI~G~AlGgGlelALacd~Rias~~a~~g~pev~lGl~pg~Ggt~rLprliG~~~A~~l~l~G  170 (715)
T PRK11730         91 ANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPTARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAG  170 (715)
T ss_pred             HHHHHHHHHCCCCCEEEEECCEEEHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHC
T ss_conf             89999999719998899988884279899999689999639988978654757287984253754132699997354117


Q ss_pred             CCCCHHHHHHCCCCCEEEC
Q ss_conf             0388489997899652622
Q gi|254780588|r  248 MKIIATDLQDLSIIDGIIP  266 (317)
Q Consensus       248 lklTa~DL~~lGiID~II~  266 (317)
T Consensus       171 ~~~~a~~A~~~GLvd~vv~  189 (715)
T PRK11730        171 KDVRAEDALKVGAVDAVVA  189 (715)
T ss_pred             CCCCHHHHHHCCCCCEECC
T ss_conf             9788999986898646258