HHsearch alignment for GI: 254780588 and conserved domain: PRK12551

>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed.
Probab=98.08  E-value=4.5e-05  Score=57.06  Aligned_cols=126  Identities=15%  Similarity=0.172  Sum_probs=84.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHH--HCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf             67768368999999999999--7199489999535324677843002799999998886237998899996167777542
Q gi|254780588|r  129 FGSPRPEGYRKAVRLMEMAD--RFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAM  206 (317)
Q Consensus       129 ~G~~~p~g~rKa~r~~~~A~--~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~  206 (317)
T Consensus        31 ~~~i~~~~a~~ii~~ll~L~~e~~~k~I~lyINSpGG~v~~-------glaIy---D~m~~~~~~V~Ti~~G~aaS~as~  100 (196)
T PRK12551         31 GEPVTSDSANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYD-------GLGIF---DTMQHVKPDVHTVCVGLAASMGAF  100 (196)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH-------HHHHH---HHHHHCCCCEEEEEEEEEHHHHHH
T ss_conf             98127899999999999860729799979999799866655-------69999---999626999799996240225678


Q ss_pred             CCCCCC--CEEEECCCCEEEECHHHHHHHHCCCCHHH--------------------------HHHHHHC----CCCHHH
Q ss_conf             113320--00220467401215544224421560122--------------------------5655420----388489
Q gi|254780588|r  207 GIAAAN--FVYMLEHAIYSVISPEGAASILWRDSSRA--------------------------AQAAIAM----KIIATD  254 (317)
Q Consensus       207 a~~~~d--~v~m~~~s~ysvisPEg~AsILwkd~~~a--------------------------~eAAeal----klTa~D  254 (317)
T Consensus       101 il~aG~kgkR~~~pns~iMIHqp~~~~---~G~a~di~~~a~el~~~~~~i~~i~a~~Tg~~~~~I~~~~~rd~~msa~E  177 (196)
T PRK12551        101 LLCAGAKGKRSSLQHSRIMIHQPLGGA---RGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDRDFFMSPSE  177 (196)
T ss_pred             HHHCCCCCCCCCCCCCEEEECCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
T ss_conf             997488886012656024770567675---67587999999999999999999999987959999998735786067999


Q ss_pred             HHHCCCCCEEECC
Q ss_conf             9978996526228
Q gi|254780588|r  255 LQDLSIIDGIIPE  267 (317)
Q Consensus       255 L~~lGiID~II~E  267 (317)
T Consensus       178 A~~yGliD~Il~~  190 (196)
T PRK12551        178 AVEYGLIDLVIDK  190 (196)
T ss_pred             HHHCCCCCEEECC
T ss_conf             9982998786078