HHsearch alignment for GI: 254780588 and conserved domain: PRK12553
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed.
Probab=98.14 E-value=3.2e-05 Score=58.06 Aligned_cols=129 Identities=19% Similarity=0.299 Sum_probs=85.0
Q ss_pred CCCCCHHHHHHH-HHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf 677683689999-999999997-199489999535324677843002799999998886237998899996167777542
Q gi|254780588|r 129 FGSPRPEGYRKA-VRLMEMADR-FKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAM 206 (317)
Q Consensus 129 ~G~~~p~g~rKa-~r~~~~A~~-f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~ 206 (317)
T Consensus 38 ~~~i~~~~a~~iia~ll~L~~~~~~kpI~lyINSpGG~v~-------~glaIy---D~m~~~~~~V~Ti~~G~aaS~asl 107 (204)
T PRK12553 38 GGQVDDASANDVMAQLLVLESIDPDRPITMYINSPGGSVT-------SGDAIY---DTIQFVRPDVQTVGTGQAASAGAV 107 (204)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH-------HHHHHH---HHHHHCCCCEEEEEEEEHHHHHHH
T ss_conf 8833889999999999997473959998999979985576-------899999---999956998499997475556889
Q ss_pred CCCCCC--CEEEECCCCEEEECHH------HHHH---HHCCC----------------CHHHHHHHHHC----CCCHHHH
Q ss_conf 113320--0022046740121554------4224---42156----------------01225655420----3884899
Q gi|254780588|r 207 GIAAAN--FVYMLEHAIYSVISPE------GAAS---ILWRD----------------SSRAAQAAIAM----KIIATDL 255 (317)
Q Consensus 207 a~~~~d--~v~m~~~s~ysvisPE------g~As---ILwkd----------------~~~a~eAAeal----klTa~DL 255 (317)
T Consensus 108 il~aG~kgkR~a~pns~iMiHqP~~~gg~~G~a~di~i~a~ei~~~~~~i~~iya~~Tg~~~e~i~~~~~rd~~msa~EA 187 (204)
T PRK12553 108 LLAAGTPGKRFALPNTRFLIHQPSLGGGIQGQASDLEIQAREILRMRERLERTLAEATGQPREKIRKDTDRDKWLTAEEA 187 (204)
T ss_pred HHHCCCCCCEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH
T ss_conf 99617746646368874677376534786555768999999999999999999998869799999987247851579999
Q ss_pred HHCCCCCEEECC
Q ss_conf 978996526228
Q gi|254780588|r 256 QDLSIIDGIIPE 267 (317)
Q Consensus 256 ~~lGiID~II~E 267 (317)
T Consensus 188 ~eyGliD~Ii~~ 199 (204)
T PRK12553 188 KDYGLVDQILTS 199 (204)
T ss_pred HHCCCCCEEECC
T ss_conf 981999787163