HHsearch results for GI: 254780588 and protein with PDBid: 1ef8_A

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.06  E-value=7e-05  Score=54.13  Aligned_cols=137  Identities=15%  Similarity=0.157  Sum_probs=93.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC---CCCCCCC--------CCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             76836899999999999971994899995353---2467784--------300279999999888623799889999616
Q gi|254780588|r  131 SPRPEGYRKAVRLMEMADRFKIPVISFIDTAG---AYPGVDA--------EARGQGEAIARATEMCLKLQVPILSIIIGE  199 (317)
Q Consensus       131 ~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpG---a~~g~~a--------E~~G~~~aia~~l~~~~~~~vP~i~vv~ge  199 (317)
                      ..+++-.+-..+.++.++.-..-+|-|..+.|   |-.|.+-        +.......+.+.+..+.++.+|+|+.|-|-
T Consensus        27 al~~~~~~~L~~al~~~~~~~~~~vVl~g~~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~  106 (261)
T 1ef8_A           27 ALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGS  106 (261)
T ss_dssp             CCCHHHHHHHHHHHHHTCSTTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEECSE
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCE
T ss_conf             99999999999999997379987999971489974766877113434674302466999999999997799889997748


Q ss_pred             CCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHHHHH-HCCCCHHHHHHCCCCCEEECC
Q ss_conf             7777542113320002204674012------155442244215---6012256554-203884899978996526228
Q gi|254780588|r  200 GGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQAAI-AMKIIATDLQDLSIIDGIIPE  267 (317)
Q Consensus       200 g~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~eAAe-alklTa~DL~~lGiID~II~E  267 (317)
                      ..+||..-...||.+++.+++.|..      +.|.+.++.++.   ...++.+..= .-.++|++++++|+||+|+++
T Consensus       107 a~GgG~~lala~D~ria~~~a~f~~pe~~~G~~~~~g~~~~l~~~~G~~~a~~~~l~g~~~~a~eA~~~Glv~~v~~~  184 (261)
T 1ef8_A          107 VWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEV  184 (261)
T ss_dssp             EETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECH
T ss_pred             EEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEECHHHHHHCCCCCEECCC
T ss_conf             864010244534440000001235840001235564203244677173678999980984459999975992275680