HHsearch results for GI: 254780588 and protein with PDBid: 1ef8_A
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.06 E-value=7e-05 Score=54.13 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=93.4
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC---CCCCCCC--------CCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 76836899999999999971994899995353---2467784--------300279999999888623799889999616
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRFKIPVISFIDTAG---AYPGVDA--------EARGQGEAIARATEMCLKLQVPILSIIIGE 199 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpG---a~~g~~a--------E~~G~~~aia~~l~~~~~~~vP~i~vv~ge 199 (317)
..+++-.+-..+.++.++.-..-+|-|..+.| |-.|.+- +.......+.+.+..+.++.+|+|+.|-|-
T Consensus 27 al~~~~~~~L~~al~~~~~~~~~~vVl~g~~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~ 106 (261)
T 1ef8_A 27 ALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGS 106 (261)
T ss_dssp CCCHHHHHHHHHHHHHTCSTTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEECSE
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCE
T ss_conf 99999999999999997379987999971489974766877113434674302466999999999997799889997748
Q ss_pred CCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHHHHH-HCCCCHHHHHHCCCCCEEECC
Q ss_conf 7777542113320002204674012------155442244215---6012256554-203884899978996526228
Q gi|254780588|r 200 GGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQAAI-AMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 200 g~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~eAAe-alklTa~DL~~lGiID~II~E 267 (317)
..+||..-...||.+++.+++.|.. +.|.+.++.++. ...++.+..= .-.++|++++++|+||+|+++
T Consensus 107 a~GgG~~lala~D~ria~~~a~f~~pe~~~G~~~~~g~~~~l~~~~G~~~a~~~~l~g~~~~a~eA~~~Glv~~v~~~ 184 (261)
T 1ef8_A 107 VWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEV 184 (261)
T ss_dssp EETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECH
T ss_pred EEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEECHHHHHHCCCCCEECCC
T ss_conf 864010244534440000001235840001235564203244677173678999980984459999975992275680