HHsearch results for GI: 254780588 and protein with PDBid: 1yg6_A
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 1yg8_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A*
Probab=98.17 E-value=5.5e-06 Score=62.01 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=85.4
Q ss_pred HHHCCCCCCHHHHHHHHHH-HHHHHH-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 4202677683689999999-999997-19948999953532467784300279999999888623799889999616777
Q gi|254780588|r 125 IKHNFGSPRPEGYRKAVRL-MEMADR-FKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGS 202 (317)
Q Consensus 125 ~~~n~G~~~p~g~rKa~r~-~~~A~~-f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~s 202 (317)
+-.-+|..+++-....... ..+..+ -.-||-.++++||-.. .+...-.-.|-..++|+.+|+.|-..|
T Consensus 28 iifl~~~I~~~~~~~~i~~l~~l~~~~~~~~I~l~InSpGG~v----------~~gl~i~D~i~~~~~~V~Tv~~G~aaS 97 (193)
T 1yg6_A 28 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVI----------TAGMSIYDTMQFIKPDVSTICMGQAAS 97 (193)
T ss_dssp EEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCH----------HHHHHHHHHHHHSSSCEEEEEEEEEET
T ss_pred EEEECCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH----------HHHHHHHHHHHHCCCCEEEEEEHHHHH
T ss_conf 8988988646889999999999980499999799997899627----------579999999842799999998249998
Q ss_pred CCCCCCCCCC--CEEEECCCCEEEECHH----HHHHHHCCCCH-------------------HHHHHHHHCC----CCHH
Q ss_conf 7542113320--0022046740121554----42244215601-------------------2256554203----8848
Q gi|254780588|r 203 GGAMGIAAAN--FVYMLEHAIYSVISPE----GAASILWRDSS-------------------RAAQAAIAMK----IIAT 253 (317)
Q Consensus 203 GGA~a~~~~d--~v~m~~~s~ysvisPE----g~AsILwkd~~-------------------~a~eAAealk----lTa~ 253 (317)
-|++-++.++ +-+|++||.+..=.|- |-++=++...+ ..++..+.|+ +||+
T Consensus 98 ~a~lIl~~G~~g~R~~~pns~iMiHq~s~~~~G~~~di~~~~~el~~~~~~i~~i~a~~tg~~~~~i~~~~~rd~~l~a~ 177 (193)
T 1yg6_A 98 MGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 177 (193)
T ss_dssp HHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHH
T ss_pred HHHHHHHCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
T ss_conf 99999975999974576653776225664657549999999999999999999999999793999999872478337799
Q ss_pred HHHHCCCCCEEECC
Q ss_conf 99978996526228
Q gi|254780588|r 254 DLQDLSIIDGIIPE 267 (317)
Q Consensus 254 DL~~lGiID~II~E 267 (317)
+.+++|+||+||..
T Consensus 178 EAl~~GiiD~Ii~~ 191 (193)
T 1yg6_A 178 EAVEYGLVDSILTH 191 (193)
T ss_dssp HHHHHTSSSEECCC
T ss_pred HHHHCCCCCEEECC
T ss_conf 99980998589356