Query gi|254780588|ref|YP_003065001.1| acetyl-CoA carboxylase carboxyltransferase subunit alpha [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 317
No_of_seqs 194 out of 1739
Neff 5.4
Searched_HMMs 23785
Date Tue May 31 19:54:54 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780588.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f9i_A Acetyl-coenzyme A carbo 100.0 0 0 892.5 28.5 316 1-317 11-326 (327)
2 2f9y_A Acetyl-COA carboxylase, 100.0 0 0 861.3 19.3 315 1-315 21-338 (339)
3 1vrg_A Propionyl-COA carboxyla 100.0 1.7E-43 0 328.1 15.8 210 63-297 286-513 (527)
4 1x0u_A Hypothetical methylmalo 100.0 6.6E-43 0 324.0 14.4 210 63-297 281-508 (522)
5 3iav_A Propionyl-COA carboxyla 100.0 3.4E-42 0 318.9 15.7 212 61-297 286-516 (530)
6 2bzr_A Propionyl-COA carboxyla 100.0 6.7E-42 0 316.8 16.2 213 61-298 302-535 (548)
7 3n6r_B Propionyl-COA carboxyla 100.0 9.8E-41 4.2E-45 308.6 16.0 212 62-298 293-518 (531)
8 1on3_A Methylmalonyl-COA carbo 100.0 1.6E-40 7E-45 307.0 15.9 210 63-297 282-509 (523)
9 3gf3_A Glutaconyl-COA decarbox 100.0 2.3E-39 9.8E-44 298.8 15.4 239 60-315 313-588 (588)
10 1pix_A Glutaconyl-COA decarbox 100.0 8.4E-38 3.5E-42 287.7 16.3 221 62-299 312-564 (587)
11 3ff6_A Acetyl-COA carboxylase 100.0 7.6E-37 3.2E-41 280.9 13.1 200 63-266 357-627 (760)
12 3k8x_A Acetyl-COA carboxylase; 100.0 6.4E-35 2.7E-39 267.3 16.6 212 68-288 363-656 (758)
13 1pix_A Glutaconyl-COA decarbox 100.0 1.8E-28 7.7E-33 221.5 10.1 236 33-287 27-283 (587)
14 1on3_A Methylmalonyl-COA carbo 99.9 4.7E-21 2E-25 168.9 23.0 216 32-266 11-239 (523)
15 3gf3_A Glutaconyl-COA decarbox 99.9 3.2E-22 1.3E-26 177.2 16.5 232 35-286 29-285 (588)
16 2bzr_A Propionyl-COA carboxyla 99.9 4.8E-20 2E-24 161.8 22.3 226 34-286 26-265 (548)
17 1vrg_A Propionyl-COA carboxyla 99.9 1.5E-19 6.5E-24 158.1 23.7 223 31-287 13-256 (527)
18 3iav_A Propionyl-COA carboxyla 99.9 9.7E-20 4.1E-24 159.6 22.6 227 34-287 15-255 (530)
19 3n6r_B Propionyl-COA carboxyla 99.9 2.6E-19 1.1E-23 156.5 21.1 203 54-286 38-262 (531)
20 1x0u_A Hypothetical methylmalo 99.9 8.2E-19 3.5E-23 153.0 22.6 207 59-287 29-250 (522)
21 2f9y_B Acetyl-coenzyme A carbo 99.8 4.8E-19 2E-23 154.6 17.0 207 64-298 49-281 (304)
22 2f9i_B Acetyl-coenzyme A carbo 99.8 2.5E-18 1E-22 149.6 17.2 208 63-298 54-284 (285)
23 3k8x_A Acetyl-COA carboxylase; 99.7 1.1E-15 4.4E-20 130.9 15.5 180 72-266 61-319 (758)
24 3ff6_A Acetyl-COA carboxylase 99.7 6.6E-15 2.8E-19 125.3 17.2 195 68-285 46-317 (760)
25 3bpp_A 1510-N membrane proteas 98.7 1.8E-07 7.4E-12 72.6 10.5 128 129-266 16-173 (230)
26 2j5g_A ALR4455 protein; enzyme 98.6 2.7E-06 1.1E-10 64.2 14.7 137 130-267 46-205 (263)
27 3hp0_A Putative polyketide bio 98.4 6.6E-06 2.8E-10 61.4 12.0 138 131-268 30-188 (267)
28 2fbm_A Y chromosome chromodoma 98.4 1.1E-05 4.8E-10 59.7 13.0 138 130-267 46-207 (291)
29 2gtr_A CDY-like, chromodomain 98.3 8E-06 3.4E-10 60.8 11.5 137 130-266 28-188 (261)
30 2f6q_A Peroxisomal 3,2-trans-e 98.3 5.9E-05 2.5E-09 54.7 15.4 138 130-267 48-209 (280)
31 2a7k_A CARB; crotonase, antibi 98.3 3.3E-05 1.4E-09 56.4 13.5 162 130-304 22-205 (250)
32 3ot6_A Enoyl-COA hydratase/iso 98.3 2.2E-05 9.3E-10 57.7 12.2 135 131-266 28-182 (232)
33 3p2l_A ATP-dependent CLP prote 98.2 3.6E-06 1.5E-10 63.3 7.6 129 129-267 36-195 (201)
34 3lke_A Enoyl-COA hydratase; ny 98.2 4.4E-05 1.9E-09 55.6 12.6 138 130-267 26-189 (263)
35 2f6i_A ATP-dependent CLP prote 98.2 8.9E-06 3.7E-10 60.5 8.9 132 129-270 45-206 (215)
36 1yg6_A ATP-dependent CLP prote 98.2 5.5E-06 2.3E-10 62.0 7.5 133 125-267 28-191 (193)
37 3isa_A Putative enoyl-COA hydr 98.1 6.1E-05 2.6E-09 54.6 12.3 159 131-304 30-207 (254)
38 2ej5_A Enoyl-COA hydratase sub 98.1 4.7E-05 2E-09 55.4 11.6 138 130-267 25-182 (257)
39 3gow_A PAAG, probable enoyl-CO 98.1 0.00014 5.8E-09 52.1 13.9 138 130-267 22-179 (254)
40 1szo_A 6-oxocamphor hydrolase; 98.1 0.00011 4.8E-09 52.6 13.4 160 131-304 39-220 (257)
41 3oc7_A Enoyl-COA hydratase; se 98.1 0.00018 7.7E-09 51.2 14.1 152 108-267 19-195 (267)
42 1pjh_A Enoyl-COA isomerase; EC 98.1 6E-05 2.5E-09 54.6 11.7 140 131-270 32-204 (280)
43 1tg6_A Putative ATP-dependent 98.1 1.6E-05 6.6E-10 58.8 8.7 141 123-273 82-253 (277)
44 2cby_A ATP-dependent CLP prote 98.1 1.4E-05 6E-10 59.0 8.1 130 128-267 32-192 (208)
45 3h0u_A Putative enoyl-COA hydr 98.1 4.5E-05 1.9E-09 55.5 10.5 165 125-304 26-216 (289)
46 1ef8_A Methylmalonyl COA decar 98.1 7E-05 3E-09 54.1 11.4 137 131-267 27-184 (261)
47 1y7o_A ATP-dependent CLP prote 98.1 2.2E-05 9E-10 57.8 8.6 136 123-268 45-213 (218)
48 1uiy_A Enoyl-COA hydratase; ly 98.0 0.00023 9.6E-09 50.5 13.5 138 131-268 22-182 (253)
49 3he2_A Enoyl-COA hydratase ECH 98.0 0.00012 4.9E-09 52.6 12.0 137 130-266 43-194 (264)
50 3kqf_A Enoyl-COA hydratase/iso 98.0 9E-05 3.8E-09 53.4 11.3 138 130-267 31-190 (265)
51 2iex_A Dihydroxynapthoic acid 98.0 3.8E-05 1.6E-09 56.0 9.3 137 131-267 35-194 (272)
52 1wz8_A Enoyl-COA hydratase; ly 98.0 7.6E-05 3.2E-09 53.9 10.4 137 131-267 33-192 (264)
53 2q35_A CURF; crotonase, lyase; 98.0 5E-05 2.1E-09 55.2 9.4 136 131-266 26-177 (243)
54 3i47_A Enoyl COA hydratase/iso 98.0 0.00019 8.1E-09 51.0 12.4 137 130-266 26-185 (268)
55 2vx2_A Enoyl-COA hydratase dom 98.0 0.00052 2.2E-08 48.0 14.2 154 104-267 39-213 (287)
56 1sg4_A 3,2-trans-enoyl-COA iso 98.0 0.00026 1.1E-08 50.1 12.7 137 131-267 27-187 (260)
57 3myb_A Enoyl-COA hydratase; ss 97.9 0.00036 1.5E-08 49.1 13.2 139 130-268 48-207 (286)
58 1nzy_A Dehalogenase, 4-chlorob 97.9 0.00044 1.8E-08 48.5 13.6 137 130-266 25-187 (269)
59 3l3s_A Enoyl-COA hydratase/iso 97.9 0.00036 1.5E-08 49.1 13.1 160 131-303 29-214 (263)
60 3h02_A Naphthoate synthase; ID 97.9 8.3E-05 3.5E-09 53.6 9.8 137 131-267 50-210 (288)
61 1dci_A Dienoyl-COA isomerase; 97.9 0.00033 1.4E-08 49.4 12.6 137 131-267 27-196 (275)
62 2pbp_A Enoyl-COA hydratase sub 97.9 0.00022 9.3E-09 50.6 11.7 137 131-267 28-183 (258)
63 3pea_A Enoyl-COA hydratase/iso 97.9 0.00029 1.2E-08 49.8 11.8 138 130-267 27-186 (261)
64 3p5m_A Enoyl-COA hydratase/iso 97.9 0.00044 1.8E-08 48.5 12.4 137 131-267 29-180 (255)
65 3fdu_A Putative enoyl-COA hydr 97.8 0.0011 4.7E-08 45.6 14.0 138 131-268 28-188 (266)
66 2j5i_A P-hydroxycinnamoyl COA 97.8 0.00039 1.6E-08 48.8 11.6 138 130-267 31-194 (276)
67 3moy_A Probable enoyl-COA hydr 97.8 0.00019 8.1E-09 51.0 9.9 137 131-267 33-188 (263)
68 3njd_A Enoyl-COA hydratase; ss 97.8 0.00085 3.6E-08 46.5 13.1 136 130-267 57-242 (333)
69 3h81_A Enoyl-COA hydratase ECH 97.8 0.00011 4.5E-09 52.8 8.5 139 130-268 47-204 (278)
70 3g64_A Putative enoyl-COA hydr 97.8 0.00064 2.7E-08 47.3 12.4 137 131-267 40-202 (279)
71 3ome_A Enoyl-COA hydratase; ss 97.8 0.00036 1.5E-08 49.1 11.1 136 131-266 46-205 (282)
72 3hin_A Putative 3-hydroxybutyr 97.7 4.3E-05 1.8E-09 55.6 5.8 136 131-267 39-194 (275)
73 3p85_A Enoyl-COA hydratase; ss 97.7 0.00016 6.5E-09 51.7 8.0 138 130-267 47-196 (270)
74 1mj3_A Enoyl-COA hydratase, mi 97.7 0.00016 6.8E-09 51.5 7.9 138 131-268 30-186 (260)
75 3gkb_A Putative enoyl-COA hydr 97.6 0.00063 2.6E-08 47.4 10.3 141 124-266 26-194 (287)
76 1q52_A MENB; lyase, structural 97.6 0.0015 6.2E-08 44.8 11.7 137 131-267 60-236 (314)
77 3ju1_A Enoyl-COA hydratase/iso 97.5 0.0076 3.2E-07 39.7 15.0 161 99-267 41-229 (407)
78 2ppy_A Enoyl-COA hydratase; be 97.5 0.002 8.4E-08 43.8 11.8 142 125-268 27-191 (265)
79 1hzd_A AUH, AU-binding protein 97.5 0.00058 2.4E-08 47.6 8.2 138 130-267 34-193 (272)
80 3lao_A Enoyl-COA hydratase/iso 97.4 0.0002 8.2E-09 51.0 5.3 163 131-306 35-219 (258)
81 3bpt_A 3-hydroxyisobutyryl-COA 97.4 0.0033 1.4E-07 42.2 11.1 138 130-267 28-189 (363)
82 1wdk_A Fatty oxidation complex 97.3 0.0045 1.9E-07 41.3 10.9 136 130-267 30-191 (715)
83 3m6n_A RPFF protein; enoyl-COA 97.2 0.00095 4E-08 46.1 6.8 86 182-267 133-228 (305)
84 2np9_A DPGC; protein inhibitor 97.1 0.0001 4.2E-09 53.0 1.4 136 131-266 190-370 (440)
85 3bf0_A Protease 4; bacterial, 97.1 0.0018 7.7E-08 44.1 7.5 123 136-265 323-502 (593)
86 2x58_A Peroxisomal bifunctiona 97.1 0.0041 1.7E-07 41.6 9.0 138 130-267 27-179 (727)
87 2wtb_A MFP2, fatty acid multif 96.9 0.0016 6.8E-08 44.5 5.8 137 131-267 30-190 (725)
88 2w3p_A Benzoyl-COA-dihydrodiol 96.3 0.013 5.5E-07 38.0 7.1 83 184-266 124-221 (556)
89 2w6a_A ARF GTPase-activating p 80.2 1.9 7.9E-05 22.7 4.2 45 1-50 12-56 (63)
90 1g7s_A Translation initiation 74.7 3.2 0.00013 21.1 4.1 62 83-164 74-138 (594)
91 2qag_C Septin-7; cell cycle, c 71.8 2.8 0.00012 21.5 3.3 32 149-182 83-115 (418)
92 3fq8_A Glutamate-1-semialdehyd 69.8 6 0.00025 19.2 7.4 93 125-235 208-312 (427)
93 3bch_A 40S ribosomal protein S 63.7 4.1 0.00017 20.3 2.8 19 143-161 166-184 (253)
94 3cf4_G Acetyl-COA decarbonylas 62.1 8.3 0.00035 18.2 4.3 44 106-166 34-77 (170)
95 3ofo_B 30S ribosomal protein S 60.4 3.9 0.00017 20.4 2.2 21 142-162 163-183 (218)
96 1vi6_A 30S ribosomal protein S 59.2 5.5 0.00023 19.4 2.8 16 182-197 131-146 (208)
97 2ywe_A GTP-binding protein LEP 57.0 7.1 0.0003 18.6 3.0 24 141-164 115-141 (600)
98 1h65_A Chloroplast outer envel 55.8 10 0.00042 17.6 3.6 12 155-166 89-100 (270)
99 3jyv_B 40S ribosomal protein S 55.3 7 0.0003 18.7 2.8 21 142-162 123-143 (193)
100 2zkq_b 40S ribosomal protein S 54.8 6.7 0.00028 18.8 2.6 22 141-162 131-152 (295)
101 1yd7_A 2-keto acid:ferredoxin 54.2 10 0.00044 17.4 3.5 55 106-160 112-187 (395)
102 2vqe_B 30S ribosomal protein S 53.4 3.8 0.00016 20.5 1.2 22 141-162 171-192 (256)
103 3bbn_B Ribosomal protein S2; s 52.6 4.4 0.00019 20.1 1.4 128 3-162 39-191 (231)
104 3cb4_D GTP-binding protein LEP 52.4 9.1 0.00038 17.9 2.9 26 140-165 112-140 (599)
105 1ytl_A Acetyl-COA decarbonylas 49.1 13 0.00056 16.7 3.8 35 106-159 35-69 (174)
106 3dzv_A 4-methyl-5-(beta-hydrox 47.9 14 0.00058 16.6 4.0 57 105-163 39-98 (273)
107 1yix_A Deoxyribonuclease YCFH; 46.8 14 0.0006 16.5 8.3 133 139-313 112-253 (265)
108 2qn6_A Translation initiation 45.5 14 0.0006 16.5 3.0 21 97-118 102-122 (414)
109 1eg7_A Formyltetrahydrofolate 43.5 16 0.00067 16.1 4.5 100 108-227 326-440 (557)
110 3ghg_A Fibrinogen alpha chain; 41.9 10 0.00043 17.5 1.9 11 37-47 147-157 (562)
111 2xtp_A GTPase IMAP family memb 41.8 17 0.00071 15.9 5.3 13 155-167 73-85 (260)
112 3d3j_A Enhancer of mRNA-decapp 39.7 4 0.00017 20.4 -0.5 64 141-214 86-155 (306)
113 2him_A L-asparaginase 1; hydro 39.3 18 0.00077 15.7 2.8 89 53-158 81-170 (358)
114 2qag_B Septin-6, protein NEDD5 39.2 8.6 0.00036 18.0 1.1 18 153-170 95-112 (427)
115 1j6o_A TATD-related deoxyribon 39.1 19 0.00078 15.7 8.0 131 140-312 122-261 (268)
116 1ekq_A Hydroxyethylthiazole ki 39.1 19 0.00078 15.7 3.9 35 126-162 63-97 (272)
117 2pnv_A Small conductance calci 38.0 17 0.00071 15.9 2.5 18 33-50 21-38 (43)
118 3p26_A Elongation factor 1 alp 37.1 20 0.00083 15.5 3.6 12 142-153 161-172 (483)
119 3def_A T7I23.11 protein; chlor 36.9 20 0.00084 15.4 3.3 17 98-114 74-90 (262)
120 1zun_B Sulfate adenylate trans 36.3 20 0.00086 15.4 3.3 56 83-158 108-164 (434)
121 2p0u_A Stilbenecarboxylate syn 35.4 16 0.00069 16.0 2.1 40 192-231 173-213 (413)
122 3llc_A Putative hydrolase; str 35.3 21 0.00089 15.3 4.7 47 106-167 35-81 (270)
123 1g57_A DHBP synthase, 3,4-dihy 34.9 21 0.0009 15.2 3.5 34 165-199 144-178 (217)
124 2c31_A Oxalyl-COA decarboxylas 34.9 15 0.00064 16.2 1.9 40 150-201 442-481 (568)
125 2vbi_A Pyruvate decarboxylase; 34.9 21 0.0009 15.2 2.9 14 186-199 450-463 (566)
126 1v8a_A Hydroxyethylthiazole ki 34.7 22 0.00091 15.2 3.8 37 126-164 61-97 (265)
127 1t3j_A Mitofusin 1; coiled coi 34.7 22 0.00091 15.2 4.7 34 6-48 51-84 (96)
128 2rdo_7 EF-G, elongation factor 34.7 22 0.00091 15.2 4.0 15 4-18 148-162 (704)
129 3mmp_A Elongation factor TU 2, 34.4 15 0.00064 16.3 1.8 45 154-199 360-421 (678)
130 1wls_A L-asparaginase; structu 34.3 22 0.00092 15.2 2.7 88 53-158 53-141 (328)
131 1snn_A DHBP synthase, 3,4-dihy 33.1 23 0.00096 15.0 3.8 34 165-199 155-189 (227)
132 1ueh_A Undecaprenyl pyrophosph 32.5 23 0.00098 15.0 3.4 27 133-159 43-69 (253)
133 3iee_A Putative exported prote 32.3 23 0.00099 14.9 4.1 74 1-74 94-174 (270)
134 2d2r_A Undecaprenyl pyrophosph 32.0 24 0.001 14.9 3.2 33 126-158 30-66 (245)
135 2b94_A Purine nucleoside phosp 31.4 24 0.001 14.8 8.2 78 61-165 42-119 (267)
136 1puj_A YLQF, conserved hypothe 31.1 24 0.001 14.8 2.7 20 155-174 167-187 (282)
137 1t9b_A Acetolactate synthase, 31.0 25 0.001 14.8 2.6 14 186-199 554-567 (677)
138 3d3k_A Enhancer of mRNA-decapp 30.3 7.2 0.0003 18.6 -0.4 20 182-201 180-199 (259)
139 3gaa_A Uncharacterized protein 30.2 25 0.0011 14.7 4.2 29 131-159 97-126 (252)
140 2zkr_6 60S ribosomal protein L 29.8 26 0.0011 14.7 4.3 36 108-161 43-78 (115)
141 1d2e_A Elongation factor TU (E 29.8 26 0.0011 14.7 3.1 19 97-115 219-241 (397)
142 1efv_A Electron transfer flavo 29.5 23 0.00097 15.0 2.0 31 129-161 66-96 (315)
143 2pan_A Glyoxylate carboligase; 29.3 14 0.0006 16.5 1.0 17 184-200 481-497 (616)
144 1ybe_A Naprtase, nicotinate ph 28.8 10 0.00043 17.5 0.1 19 145-163 275-294 (449)
145 2d3m_A Pentaketide chromone sy 28.5 27 0.0011 14.5 2.4 15 198-212 174-188 (406)
146 1fzc_B Fibrin; blood coagulati 28.3 27 0.0011 14.5 3.1 46 6-51 1-46 (328)
147 3fim_B ARYL-alcohol oxidase; A 28.2 14 0.00058 16.6 0.7 14 154-167 318-331 (566)
148 3ddo_A Urdpase, upase, uridine 28.1 27 0.0012 14.5 7.9 76 62-164 23-98 (253)
149 1k4i_A 3,4-dihydroxy-2-butanon 28.0 18 0.00075 15.8 1.2 38 164-202 143-181 (233)
150 3ble_A Citramalate synthase fr 26.7 29 0.0012 14.3 3.4 30 137-166 168-197 (337)
151 3cm0_A Adenylate kinase; ATP-b 26.7 20 0.00084 15.4 1.3 23 134-156 12-34 (186)
152 2wlt_A L-asparaginase; hydrola 26.4 23 0.00096 15.0 1.6 89 53-157 63-154 (332)
153 1t0k_B YL32, RP73, 60S ribosom 26.2 22 0.00094 15.1 1.5 23 139-161 52-74 (105)
154 2vg0_A Short-chain Z-isoprenyl 25.8 30 0.0013 14.2 4.3 28 134-161 30-57 (227)
155 2qpt_A EH domain-containing pr 25.7 23 0.00099 14.9 1.5 15 155-169 156-170 (550)
156 1jwy_B Dynamin A GTPase domain 25.7 30 0.0013 14.2 4.9 16 151-166 129-144 (315)
157 2iht_A Carboxyethylarginine sy 25.5 17 0.00072 15.9 0.8 10 214-223 485-494 (573)
158 3dfz_A SIRC, precorrin-2 dehyd 25.1 31 0.0013 14.1 2.6 28 102-146 26-53 (223)
159 2ve7_C Kinetochore protein NUF 24.6 8.1 0.00034 18.2 -1.0 29 74-104 190-218 (250)
160 1z7d_A Ornithine aminotransfer 24.6 32 0.0013 14.0 8.7 93 125-233 221-322 (433)
161 1vq8_F 50S ribosomal protein L 24.2 23 0.00098 15.0 1.3 26 1-27 1-26 (120)
162 3foz_A TRNA delta(2)-isopenten 23.7 33 0.0014 13.9 2.5 109 138-252 22-179 (316)
163 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 23.7 28 0.0012 14.4 1.6 64 194-258 118-184 (197)
164 2vg3_A Undecaprenyl pyrophosph 23.5 33 0.0014 13.9 3.3 35 124-158 68-106 (284)
165 3iqw_A Tail-anchored protein t 23.4 33 0.0014 13.9 6.3 27 132-158 231-257 (334)
166 2qvb_A Haloalkane dehalogenase 23.3 26 0.0011 14.6 1.4 73 133-211 40-117 (297)
167 1zbt_A RF-1, peptide chain rel 23.3 32 0.0014 14.0 1.9 23 2-24 10-32 (371)
168 2d1p_C TUSB, hypothetical prot 22.9 32 0.0013 14.0 1.8 61 210-281 23-84 (95)
169 1r48_A Proline/betaine transpo 22.4 35 0.0015 13.7 2.8 14 35-48 15-28 (33)
170 3nxk_A Cytoplasmic L-asparagin 22.1 24 0.001 14.8 1.0 80 53-148 67-146 (334)
171 2jf7_A Strictosidine-O-beta-D- 21.9 35 0.0015 13.7 3.5 63 132-197 391-464 (532)
172 1sfx_A Conserved hypothetical 21.9 35 0.0015 13.7 5.7 66 232-297 28-104 (109)
173 1j8m_F SRP54, signal recogniti 21.4 36 0.0015 13.6 10.3 26 140-166 169-194 (297)
174 2fek_A Low molecular weight pr 21.3 36 0.0015 13.6 2.9 33 265-297 133-165 (167)
175 4pga_A Glutaminase-asparaginas 21.0 21 0.00089 15.3 0.5 81 53-149 68-149 (337)
176 2uz1_A Benzaldehyde lyase; thi 21.0 37 0.0016 13.5 1.9 45 145-201 432-477 (563)
177 2aka_B Dynamin-1; fusion prote 20.9 37 0.0016 13.5 5.9 48 152-199 124-172 (299)
178 1o97_D Electron transferring f 20.8 37 0.0016 13.5 4.3 28 132-161 70-97 (320)
179 1zxa_A CGMP-dependent protein 20.8 37 0.0016 13.5 4.1 36 6-46 15-50 (67)
180 1wf3_A GTP-binding protein; GT 20.4 38 0.0016 13.5 4.2 10 155-164 57-66 (301)
181 1q1g_A Uridine phosphorylase p 20.2 38 0.0016 13.4 8.3 69 73-165 30-98 (276)
182 2w6k_A COBE; biosynthetic prot 20.2 38 0.0016 13.4 2.3 16 142-157 59-74 (145)
183 3ju2_A Uncharacterized protein 20.1 38 0.0016 13.4 6.6 31 135-167 81-111 (284)
No 1
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=100.00 E-value=0 Score=892.48 Aligned_cols=316 Identities=47% Similarity=0.786 Sum_probs=310.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCC
Q ss_conf 97531455789999999999997422366677699999999999999999742699999888763500223799986225
Q gi|254780588|r 1 MRHYLDFEEPISDLEAKIHELKKLSREDINEDFSEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINSLF 80 (317)
Q Consensus 1 M~~yLdFEkpI~eLe~kI~eL~~~~~~~~~~~~~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~ 80 (317)
|++||||||||+||++||++|++.+. .++.++++||.+|++++++++++||+||||||+||+||||+||+++|||+++|
T Consensus 11 ~~~~LdFEkpI~eLe~kI~eL~~~~~-~~~~d~~~ei~~Le~k~~~l~~~iy~~Ls~wq~Vq~ARhp~RP~~~DyI~~if 89 (327)
T 2f9i_A 11 RGSMLDFEKPLFEIRNKIESLKESQD-KNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPTTLDYIPYIF 89 (327)
T ss_dssp SSCCCGGGHHHHHHHHHHHCC------------CTTHHHHHHHHHHHHHHHHHSCCHHHHHHHHTBTTSCCHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHC
T ss_conf 66656742579999999999874550-56787799999999999999999870899999999974789997799998734
Q ss_pred CCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 45067227533478972999988753800899984587750234420267768368999999999999719948999953
Q gi|254780588|r 81 THFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDT 160 (317)
Q Consensus 81 ~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDt 160 (317)
|||+||||||.|+||+||++|+|+|+|+||+|||||||+++++|++|||||++|+|||||+|+|++|++|++||||||||
T Consensus 90 ddf~eLhGDR~~~dD~aii~g~a~~~g~~v~vig~~kg~~~~e~~~~nfGm~~pegyrKA~R~m~~Aekf~~Piit~IDT 169 (327)
T 2f9i_A 90 DSFMELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDT 169 (327)
T ss_dssp EEEEECCCCSSSCCCTTEEEEEEEETTEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 66478505655676622445435407805899975057665411032289999799999999999999749977998427
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCCHH
Q ss_conf 53246778430027999999988862379988999961677775421133200022046740121554422442156012
Q gi|254780588|r 161 AGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASILWRDSSR 240 (317)
Q Consensus 161 pGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsILwkd~~~ 240 (317)
||||||.+||++||+++||+|+++|++++||+||||+||||||||||+++||+|+||||||||||||||||||||||+++
T Consensus 170 pGA~pg~~aEe~Gqa~aIA~~l~~~~~l~vP~isvIiGEGgSGGAlal~~ad~v~mle~a~ysVisPEg~asIlwkd~~~ 249 (327)
T 2f9i_A 170 KGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSVISPEGAAALLWKDSNL 249 (327)
T ss_dssp SCSCCCHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTCCCSEEEEETTCBCBSSCHHHHHHHHSSCGGG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEEEECCEEEEEECHHHHHHHHCCCCHH
T ss_conf 98678877441489999999999985899997999975755531134533784887457189995667777885458125
Q ss_pred HHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 25655420388489997899652622889844489899999999999999999858998999999999999724869
Q gi|254780588|r 241 AAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIREHRRQKYLNIGRNL 317 (317)
Q Consensus 241 a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~~R~~Kf~~iG~~l 317 (317)
+++||++|||||+||+++||||+|||||+||||+||..++.+||++|.++|++|.+++.++|+++||+|||+||+|.
T Consensus 250 a~eAAe~lklTA~dLl~lGiID~II~EP~GgAh~d~~~~~~~lk~~i~~~L~~L~~~~~~~Ll~~R~~Kfr~iG~~~ 326 (327)
T 2f9i_A 250 AKIAAETMKITAHDIKQLGIIDDVISEPLGGAHKDIEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYI 326 (327)
T ss_dssp HHHHHHHHTCBHHHHHHTTSSSEEECCCTTCGGGCHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHTCCCEE
T ss_pred HHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 89999862079999997799728716999855359999999999999999999977999999999999999637731
No 2
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha chain; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=100.00 E-value=0 Score=861.26 Aligned_cols=315 Identities=49% Similarity=0.849 Sum_probs=308.7
Q ss_pred CC-CCCHHHHHHHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 97-53145578999999999999742236--6677699999999999999999742699999888763500223799986
Q gi|254780588|r 1 MR-HYLDFEEPISDLEAKIHELKKLSRED--INEDFSEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYIN 77 (317)
Q Consensus 1 M~-~yLdFEkpI~eLe~kI~eL~~~~~~~--~~~~~~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~ 77 (317)
|+ |||||||||+||++||++|+..+.++ .+.++++||.+|++++++++++||+||||||+||+||||+||+++|||+
T Consensus 21 M~~~yLdFEkpi~eLe~kI~eL~~~~~~~~~~~~d~~~ei~~Le~k~~~~~~~iy~~Lt~wq~Vq~ARhP~RP~~~DyI~ 100 (339)
T 2f9y_A 21 MSLNFLDFEQPIAELEAKIDSLTAGSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVR 100 (339)
T ss_dssp ---CCCSTTHHHHHTTTTTTC---------------CCGGGGTHHHHHTTTTHHHHTCCHHHHHHHHTCTTCCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHH
T ss_conf 57533572327999999999998665126534688899999999999999999873799999999971899965799997
Q ss_pred HCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 22545067227533478972999988753800899984587750234420267768368999999999999719948999
Q gi|254780588|r 78 SLFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISF 157 (317)
Q Consensus 78 ~l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~l 157 (317)
++|+||+||||||.|+||++|++|+|+++|+||+|||||||++|++|+.|||||++|+|||||+|+|++|++|++|||||
T Consensus 101 ~lf~df~eL~GDr~~~dD~aii~G~ar~~g~~v~vig~~kg~~~~~~~~~nfG~~~pegyrKA~R~m~laekf~iPIit~ 180 (339)
T 2f9y_A 101 LAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF 180 (339)
T ss_dssp HHCEEEEECCCCSSSCCCTTEEEEEEEETTEEEEEEEECCCSSTTHHHHTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HCCCCEEEECCCCCCCCCHHHHHHEEEEECCEEEEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 54674699315765565442431203650553799862267762321002688888799999999999999739966998
Q ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCCC
Q ss_conf 95353246778430027999999988862379988999961677775421133200022046740121554422442156
Q gi|254780588|r 158 IDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASILWRD 237 (317)
Q Consensus 158 vDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsILwkd 237 (317)
|||||||||.+||++||+++||+|+++|++++||+||||+||||||||||++++|+|+||||||||||||||||||||||
T Consensus 181 vDTpGa~pG~~aEerG~~~aiA~~l~~~~~l~VP~IsvVigeg~sGGAlam~~~D~vlmle~A~ySVisPEg~AsILwrd 260 (339)
T 2f9y_A 181 IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKS 260 (339)
T ss_dssp EEESCSCCSHHHHHTTHHHHHHHHHHHHHTCSSCEEEEEEEEEEHHHHHTTCCCSEEEECTTCEEESSCHHHHHHHHSSC
T ss_pred EECCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCHHHCCHHHHHEEECHHHCHHHCCCC
T ss_conf 52798688700022379999999999997699987999977644543211135214312302250362433210000477
Q ss_pred CHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf 012256554203884899978996526228898444898999999999999999998589989999999999997248
Q gi|254780588|r 238 SSRAAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIREHRRQKYLNIGR 315 (317)
Q Consensus 238 ~~~a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~~R~~Kf~~iG~ 315 (317)
++++++||++|++||+||+++||||+|||||+||||+|+..++.+++.+|.++|++|..++.++|+++||+||++||+
T Consensus 261 ~~~a~~AAe~lkita~dl~~~giID~II~EP~ggAhrd~~~~~~~l~~~i~~~L~~L~~~~~~~l~~~R~~kf~~~G~ 338 (339)
T 2f9y_A 261 ADKAPLAAEAMGIIRPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGY 338 (339)
T ss_dssp STTHHHHHHHHTCSHHHHHTTTSCSCCCCCSTTCGGGCHHHHHHHHHHHHHHHTTTTTTSCHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 124599999987379999977997187058998564699999999999999999999679999999999999997079
No 3
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.30A {Thermotoga maritima MSB8} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=1.7e-43 Score=328.08 Aligned_cols=210 Identities=25% Similarity=0.398 Sum_probs=184.5
Q ss_pred HHHCCHHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHH
Q ss_conf 763500223-79998622545--067227533478972999988753800899984587750234420267768368999
Q gi|254780588|r 63 VSRHPNRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRK 139 (317)
Q Consensus 63 ~aRh~~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rK 139 (317)
+++.+.+|| +.++|..++|+ |+|+.. .|+ +++||||||++|+||.||||+.+ +++|+++|++++|
T Consensus 286 vP~~~~~~yD~r~vi~~l~D~~~f~E~~~--~~g--~~vvtg~arl~G~pVgviAn~~~--------~~~G~~~~~~a~K 353 (527)
T 1vrg_A 286 LPDNPNKGYDVRDVIKRVVDHGEFFEVQP--YFA--KNIVIGFARIQGKTVGIVANQPS--------VLAGVLDIDSSDK 353 (527)
T ss_dssp SCSSTTSCCCTHHHHHHHSGGGCCEEEST--TSS--TTEEEEEEEETTEEEEEEEECTT--------SGGGCBCHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHCCCCCHHHHHC--CCC--CCEEEEEEEECCEEEEEEECCCC--------CCCCCCCCHHHHH
T ss_conf 78998988789999998468851200000--468--85799999999888889833663--------3378875047899
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC----CCCEE
Q ss_conf 99999999971994899995353246778430027999999988862379988999961677775421133----20002
Q gi|254780588|r 140 AVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA----ANFVY 215 (317)
Q Consensus 140 a~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~----~d~v~ 215 (317)
+.|||++|++|+||||||+|||||++|.++|++|+..++|+++.++++++||+|+||+|++++||+++++. +|+++
T Consensus 354 aarfi~lcd~~~lPlv~lvDtpGf~~G~~aE~~G~~~~gA~l~~a~a~~~vP~i~vi~gk~~Ggg~~am~~~~~~~d~~~ 433 (527)
T 1vrg_A 354 AARFIRFLDAFNIPILTFVDTPGYLPGVAQEHGGIIRHGAKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVL 433 (527)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEE
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCCCCEEE
T ss_conf 99999985145986699950688688789999749999999999998389987999868866587761067777888899
Q ss_pred EECCCCEEEECHHHHHHHHCCCCHHHHHHHHHC-----------CCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 204674012155442244215601225655420-----------388489997899652622889844489899999999
Q gi|254780588|r 216 MLEHAIYSVISPEGAASILWRDSSRAAQAAIAM-----------KIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVG 284 (317)
Q Consensus 216 m~~~s~ysvisPEg~AsILwkd~~~a~eAAeal-----------klTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk 284 (317)
+|++++++||+||||++|+||+...+.+.++.+ ..++....+.|.||+|| +| ..++
T Consensus 434 Awp~a~~~vm~pegaa~i~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~iD~VI-dP------------~~tR 500 (527)
T 1vrg_A 434 AWPSAEIAVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAASRGYVDMVI-DP------------RETR 500 (527)
T ss_dssp ECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHTSSHHHHHHTTSSSEEC-CG------------GGHH
T ss_pred ECCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEE-CH------------HHHH
T ss_conf 9787718616999999988431211557989999999999999857999998757888108-88------------9999
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999998589
Q gi|254780588|r 285 EIISQFLSETSTY 297 (317)
Q Consensus 285 ~~i~~~L~~L~~~ 297 (317)
+.|.+.|+.+...
T Consensus 501 ~~l~~~l~~~~~k 513 (527)
T 1vrg_A 501 KYIMRALEVCETK 513 (527)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999997606
No 4
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase alpha subunit; lyase; 2.20A {Sulfolobus tokodaii str}
Probab=100.00 E-value=6.6e-43 Score=323.96 Aligned_cols=210 Identities=26% Similarity=0.420 Sum_probs=182.2
Q ss_pred HHHCCHHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHH
Q ss_conf 763500223-79998622545--067227533478972999988753800899984587750234420267768368999
Q gi|254780588|r 63 VSRHPNRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRK 139 (317)
Q Consensus 63 ~aRh~~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rK 139 (317)
+.+.+.||+ +.+.|..++|+ |+|++++ |+ +++||||+|++|+||.|||++ +.+++|+++|++++|
T Consensus 281 vP~~~~~~yd~r~vi~~i~D~~~f~E~~~~--~g--~~vvtg~arl~G~~VGvvAn~--------p~~~~G~~~~~~a~K 348 (522)
T 1x0u_A 281 VPNDAAKPYNMREIIYKIVDNGEFLEVHKH--WA--QNIIVGFARIAGNVVGIVANN--------PEEFGGSIDIDAADK 348 (522)
T ss_dssp SCSSSSCCCCHHHHHHHHSGGGCCEEETTT--SC--TTEEEEEEEETTEEEEEEEEC--------TTTGGGCBCHHHHHH
T ss_pred CCCCCCCCCCCHHHEEEECCCCCEEEEECC--CC--CCEEEEEEEECCCEEEEECCC--------CCCCCCCCCHHHHHH
T ss_conf 577668777705420364157734776437--57--846788888869266897778--------644678777377999
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC----CCCEE
Q ss_conf 99999999971994899995353246778430027999999988862379988999961677775421133----20002
Q gi|254780588|r 140 AVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA----ANFVY 215 (317)
Q Consensus 140 a~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~----~d~v~ 215 (317)
+.|||++|++|+||||||+|||||++|.++|++|+.+++|+++.++++++||+|+||+|++++||+++++. +|+++
T Consensus 349 aarfi~lcd~~~iPlv~lvDtpGf~~G~~~E~~Gi~~~ga~~~~a~a~~~vP~isvi~~~~~Ggg~~am~~~~~~~d~~~ 428 (522)
T 1x0u_A 349 AARFIRFCDAFNIPLISLVDTPGYVPGTDQEYKGIIRHGAKMLYAFAEATVPKITVIVRKSYGGAHIAMSIKSLGADLVY 428 (522)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECCBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEE
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCEEE
T ss_conf 99999733002754799842787777679999729999999999998389987999867654667775426677888799
Q ss_pred EECCCCEEEECHHHHHHHHCCCC-HHHHHHHHHCC----------CCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 20467401215544224421560-12256554203----------88489997899652622889844489899999999
Q gi|254780588|r 216 MLEHAIYSVISPEGAASILWRDS-SRAAQAAIAMK----------IIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVG 284 (317)
Q Consensus 216 m~~~s~ysvisPEg~AsILwkd~-~~a~eAAealk----------lTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk 284 (317)
+|++++++||+|||+++|+||+. .++++..+.++ .++..+.+.|+||+|| +| ...+
T Consensus 429 awP~a~~~vm~pEgaa~i~~r~~l~~a~~~~~~~~~~~~~~~~~~~~~~~aa~~g~iD~VI-dP------------~~tR 495 (522)
T 1x0u_A 429 AWPTAEIAVTGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANPYWAAEKGLVDDVI-EP------------KDTR 495 (522)
T ss_dssp ECTTCEEESSCHHHHHHHHTSSSSSSSSSSSSSSHHHHHHHHHHHSSSHHHHHTTSSSEEC-CG------------GGHH
T ss_pred ECCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEE-CH------------HHHH
T ss_conf 9675779845999999998676564378989999999999998757999998668857328-87------------9999
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999998589
Q gi|254780588|r 285 EIISQFLSETSTY 297 (317)
Q Consensus 285 ~~i~~~L~~L~~~ 297 (317)
+.|.+.|+.|...
T Consensus 496 ~~l~~~L~~~~~k 508 (522)
T 1x0u_A 496 RVIVAGLEMLKTK 508 (522)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999997627
No 5
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 1xny_A* 1xnv_A* 1xo6_A
Probab=100.00 E-value=3.4e-42 Score=318.89 Aligned_cols=212 Identities=26% Similarity=0.390 Sum_probs=185.0
Q ss_pred HHHHHCCHHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHH
Q ss_conf 88763500223-79998622545--0672275334789729999887538008999845877502344202677683689
Q gi|254780588|r 61 TQVSRHPNRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGY 137 (317)
Q Consensus 61 v~~aRh~~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~ 137 (317)
.-+.+.+.||+ +.++|..++|+ |+|+. ..|+ +++||||||++|+||.|||++ +.+++|+++|+++
T Consensus 286 ~ivP~~~~~~yd~r~vi~~i~D~~~f~E~~--~~~g--~~ivtg~arl~G~~VGviAn~--------p~~~~G~~~~~~a 353 (530)
T 3iav_A 286 TIVPDSANQPYDMHSVIEHVLDDAEFFETQ--PLFA--PNILTGFGRVEGRPVGIVANQ--------PMQFAGCLDITAS 353 (530)
T ss_dssp GSSCSSTTCCCCHHHHHHTTSGGGCCEEES--TTSC--TTEEEEEEEETTEEEEEEEEC--------TTSGGGCBCHHHH
T ss_pred CCCCCCCCCCCCCHHHCEEEEECCCCEEEC--CCCC--CCEEEEEEEECCEEEEEECCC--------CCCCCCCCCCCHH
T ss_conf 037787899874040066777566322202--4558--852788999877589997557--------3223688785569
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC----CCC
Q ss_conf 9999999999971994899995353246778430027999999988862379988999961677775421133----200
Q gi|254780588|r 138 RKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA----ANF 213 (317)
Q Consensus 138 rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~----~d~ 213 (317)
+|+.|||++|++|+||||||+|||||++|.++|++|+..++|+++.++++++||+||||+|++++||+++++. +|+
T Consensus 354 ~Kaarfi~lcd~~~iPlv~lvDtpGf~~G~~~E~~G~~~~gA~l~~a~a~~~vP~isviigka~Ggg~~am~~~~~~~d~ 433 (530)
T 3iav_A 354 EKAARFVRTCDAFNVPVLTFVDVPGFLPGVDQEHDGIIRRGAKLIFAYAEATVPLITVITRKAFGGAYVVMGSKHLGADL 433 (530)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSE
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCE
T ss_conf 99999999986369965899744676788899997699999999999983899869999898540887874244568887
Q ss_pred EEEECCCCEEEECHHHHHHHHCCCCH-HHHHHHHHC-----------CCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHH
Q ss_conf 02204674012155442244215601-225655420-----------388489997899652622889844489899999
Q gi|254780588|r 214 VYMLEHAIYSVISPEGAASILWRDSS-RAAQAAIAM-----------KIIATDLQDLSIIDGIIPEPIGGAHRNPAQTIS 281 (317)
Q Consensus 214 v~m~~~s~ysvisPEg~AsILwkd~~-~a~eAAeal-----------klTa~DL~~lGiID~II~EP~GGAHrd~~~~~~ 281 (317)
+++|++++++||+||||++|+||+.. .+.+.++++ ..++....+.+.||+||+ | .
T Consensus 434 ~~AwP~a~~~vm~~egaa~i~~r~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~vD~vId-P------------~ 500 (530)
T 3iav_A 434 NLAWPTAQIAVMGAQGAVNILHRRTIADAGDDAEATRARLIQEYEDALLNPYTAAERGYVDAVIM-P------------S 500 (530)
T ss_dssp EEECTTCEEESSCHHHHHHHHTSTTTSTTCTTCHHHHHHHHHHHHHHHSSSHHHHHTTSSSEECC-G------------G
T ss_pred EEECCCCEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC-H------------H
T ss_conf 99968775971699999999976556427777899999999999988569899987478787478-9------------9
Q ss_pred HHHHHHHHHHHHHHCC
Q ss_conf 9999999999998589
Q gi|254780588|r 282 SVGEIISQFLSETSTY 297 (317)
Q Consensus 282 ~lk~~i~~~L~~L~~~ 297 (317)
.+|+.|.+.|+.|.+.
T Consensus 501 dtR~~L~~~L~~l~~k 516 (530)
T 3iav_A 501 DTRRHIVRGLRQLRTK 516 (530)
T ss_dssp GHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999998616
No 6
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=100.00 E-value=6.7e-42 Score=316.81 Aligned_cols=213 Identities=22% Similarity=0.350 Sum_probs=184.7
Q ss_pred HHHHHCCHHHH-HHHHHHHCCCC-EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHH
Q ss_conf 88763500223-79998622545-06722753347897299998875380089998458775023442026776836899
Q gi|254780588|r 61 TQVSRHPNRPH-YIDYINSLFTH-FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYR 138 (317)
Q Consensus 61 v~~aRh~~Rp~-~~dyi~~l~~d-f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~r 138 (317)
..+.+.+.||| ++++|..++|+ |+|++++ |+ +++||||||++|+||.||||+ +.+++|+++|++++
T Consensus 302 ~~iP~~~~~~yd~r~vi~~i~D~sf~E~~~~--~g--~~~vtg~aRl~G~~VGviAn~--------~~~~~G~l~~~aa~ 369 (548)
T 2bzr_A 302 TLIPDSPNQPYDMHEVITRLLDDEFLEIQAG--YA--QNIVVGFGRIDGRPVGIVANQ--------PTHFAGCLDINASE 369 (548)
T ss_dssp GTSCSSTTCCCCTHHHHHHHSSSCCEEESTT--SS--TTEEEEEEEETTEEEEEEEEC--------TTSGGGCBCHHHHH
T ss_pred HHCCCCCCCCCCHHHHHHHHHCCCCCEECCC--CC--CCEEEEEEEECCCEEEEEECC--------CCCCCCCCCCHHHH
T ss_conf 3067789986628766576616862110466--56--864589999769479998156--------41336787806789
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC----CCCCE
Q ss_conf 99999999997199489999535324677843002799999998886237998899996167777542113----32000
Q gi|254780588|r 139 KAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIA----AANFV 214 (317)
Q Consensus 139 Ka~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~----~~d~v 214 (317)
|+.|||++|++|+||||||+|||||++|.++|++|+..++|+++.++++++||+|+||+|++++||+++++ .+|.+
T Consensus 370 Kaarfi~lcd~f~iPlv~lvD~pGf~~G~~~E~~gi~~~ga~l~~A~a~a~vP~itvi~rka~G~g~~am~~~~~~~d~~ 449 (548)
T 2bzr_A 370 KAARFVRTCDCFNIPIVMLVDVPGFLPGTDQEYNGIIRRGAKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVN 449 (548)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEE
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCCCCEE
T ss_conf 99999999874389816997489878768999974999999999999828988699997886545766525766788879
Q ss_pred EEECCCCEEEECHHHHHHHHCCCCHHHHH-------H------HHH--CCCCHHHHHHCCCCCEEECCCCCCCCCCHHHH
Q ss_conf 22046740121554422442156012256-------5------542--03884899978996526228898444898999
Q gi|254780588|r 215 YMLEHAIYSVISPEGAASILWRDSSRAAQ-------A------AIA--MKIIATDLQDLSIIDGIIPEPIGGAHRNPAQT 279 (317)
Q Consensus 215 ~m~~~s~ysvisPEg~AsILwkd~~~a~e-------A------Aea--lklTa~DL~~lGiID~II~EP~GGAHrd~~~~ 279 (317)
++|+++.++||+|||+++|+||+.....+ + ++. ...++....+.+.||+||+ |
T Consensus 450 ~AwP~a~~~vm~~egaa~i~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~iD~VId-P----------- 517 (548)
T 2bzr_A 450 LAWPTAQIAVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDTLVNPYVAAERGYVGAVIP-P----------- 517 (548)
T ss_dssp EECTTCEEESSCHHHHHHHHTCCC----------CHHHHHHHHHHHHHHHSBSHHHHHTTSSSEECC-G-----------
T ss_pred EECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEC-H-----------
T ss_conf 9857654850799999999989998751116658789999999999986479999987288780377-8-----------
Q ss_pred HHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999985899
Q gi|254780588|r 280 ISSVGEIISQFLSETSTYS 298 (317)
Q Consensus 280 ~~~lk~~i~~~L~~L~~~~ 298 (317)
..+|..|...|+.+.+..
T Consensus 518 -~dTR~~L~~~l~~~~~k~ 535 (548)
T 2bzr_A 518 -SHTRGYIGTALRLLERKI 535 (548)
T ss_dssp -GGHHHHHHHHHHHTTTC-
T ss_pred -HHHHHHHHHHHHHHHCCC
T ss_conf -999999999999986156
No 7
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=9.8e-41 Score=308.57 Aligned_cols=212 Identities=22% Similarity=0.352 Sum_probs=183.5
Q ss_pred HHHHCCHHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHH
Q ss_conf 8763500223-79998622545--06722753347897299998875380089998458775023442026776836899
Q gi|254780588|r 62 QVSRHPNRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYR 138 (317)
Q Consensus 62 ~~aRh~~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~r 138 (317)
.+.+.+.+|| +.+.|..++|+ |+|+.. .|+ +++|||||||+|+||.||||+. .+++|+++|++++
T Consensus 293 ~vP~d~~~~yd~r~ii~~~~D~~~f~E~~~--~~g--~~ivtg~aRi~G~~VGivAn~~--------~~~~G~~~~~~a~ 360 (531)
T 3n6r_B 293 LVPDNPNTPYDMKELIHKLADEGDFYEIQE--EFA--KNIITGFIRLEGRTVGVVANQP--------LVLAGCLDIDSSR 360 (531)
T ss_dssp TSCSSTTCCCCHHHHHHHHSTTSCCEEEST--TSS--TTEEEEEEEETTEEEEEEEECT--------TTGGGCBCHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHCCCCCCCEEEEC--CCC--CCCEEEEEEECCCEEEEECCCC--------HHCCCCCCHHHHH
T ss_conf 478999886536765221256751023130--417--7614688898696799982451--------1026873046899
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC----CCCE
Q ss_conf 999999999971994899995353246778430027999999988862379988999961677775421133----2000
Q gi|254780588|r 139 KAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA----ANFV 214 (317)
Q Consensus 139 Ka~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~----~d~v 214 (317)
|+.|||++|++|+||||||+|||||++|.++|++|+..++|+++.++++++||+||||+|++++||+++++. +|.+
T Consensus 361 Kaarfi~lcd~f~iPlv~lvD~pGf~~G~~aE~~Giir~ga~l~~A~a~a~vP~itvi~rka~Gga~~am~~~~~~~d~~ 440 (531)
T 3n6r_B 361 KAARFVRFCDAFEIPLLTLIDVPGFLPGTSQEYGGVIKHGAKLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFN 440 (531)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECSBCCSHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEE
T ss_conf 99999997875288369994488878898999986999999999999718999899997986419889742666788879
Q ss_pred EEECCCCEEEECHHHHHHHHCCCCHHHHHHHHH-----C--CCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 220467401215544224421560122565542-----0--388489997899652622889844489899999999999
Q gi|254780588|r 215 YMLEHAIYSVISPEGAASILWRDSSRAAQAAIA-----M--KIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVGEII 287 (317)
Q Consensus 215 ~m~~~s~ysvisPEg~AsILwkd~~~a~eAAea-----l--klTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i 287 (317)
++|+++.++||+|||+++|+||+....+|..+. . .-++....+.++||+||+ | ..+++.|
T Consensus 441 ~AwP~a~~~vm~~ega~~i~~~~e~~~~e~~~~~~~e~~~~~~~p~~aa~~~~iD~vId-P------------~dTR~~l 507 (531)
T 3n6r_B 441 YAWPTAEVAVMGAKGATEIIHRGDLGDPEKIAQHTADYEERFANPFVASERGFVDEVIQ-P------------RSTRKRV 507 (531)
T ss_dssp EECTTCEEESSCHHHHHHHHCCTTTTSTTHHHHHHHHHHHHHSSSHHHHHHTSSSEECC-G------------GGHHHHH
T ss_pred EECCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEC-H------------HHHHHHH
T ss_conf 99786658736999999987434347967899999999998549899986588671078-6------------9999999
Q ss_pred HHHHHHHHCCC
Q ss_conf 99999985899
Q gi|254780588|r 288 SQFLSETSTYS 298 (317)
Q Consensus 288 ~~~L~~L~~~~ 298 (317)
...|+.|....
T Consensus 508 ~~~l~~l~~~~ 518 (531)
T 3n6r_B 508 ARAFASLRNKS 518 (531)
T ss_dssp HHHHHTTTTCC
T ss_pred HHHHHHHHCCC
T ss_conf 99999864687
No 8
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=100.00 E-value=1.6e-40 Score=306.98 Aligned_cols=210 Identities=22% Similarity=0.335 Sum_probs=183.9
Q ss_pred HHHCCHHHH-HHHHHHHCCC--CEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHH
Q ss_conf 763500223-7999862254--5067227533478972999988753800899984587750234420267768368999
Q gi|254780588|r 63 VSRHPNRPH-YIDYINSLFT--HFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRK 139 (317)
Q Consensus 63 ~aRh~~Rp~-~~dyi~~l~~--df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rK 139 (317)
+.+.+.+|| .++.|..++| +|+|++. .|+ +++||||+|++|+||.|||++.. ++.|.++|++++|
T Consensus 282 vp~~~~~~yd~r~vi~~v~D~~~f~E~~~--~~g--~~~vtg~aRl~G~~VGviAn~p~--------~~~G~l~~~~a~K 349 (523)
T 1on3_A 282 VPIDGKKGYDVRDVIAKIVDWGDYLEVKA--GYA--TNLVTAFARVNGRSVGIVANQPS--------VMSGCLDINASDK 349 (523)
T ss_dssp SCSSTTCCCCTHHHHHHHSGGGCEEEEST--TSS--TTEEEEEEEETTEEEEEEEECTT--------SGGGCBCHHHHHH
T ss_pred HHHHCCCCCCHHHHEEECCCCCCEEEEEC--CCC--CCHHHHHHHHCCCEEEEEECCCC--------CCCCCCCCHHHHH
T ss_conf 76404678563672020455675311464--536--61887877645955899924763--------2368887067899
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC----CCCEE
Q ss_conf 99999999971994899995353246778430027999999988862379988999961677775421133----20002
Q gi|254780588|r 140 AVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA----ANFVY 215 (317)
Q Consensus 140 a~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~----~d~v~ 215 (317)
+.|||++|+.|+||||+|+|||||++|.++|++|+..++|+++.++++++||+|+||+|++++||+++++. +|.++
T Consensus 350 aarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Gi~~~gA~~~~A~a~a~vP~isvi~~k~~G~g~~am~~~~~~~d~~~ 429 (523)
T 1on3_A 350 AAEFVNFCDSFNIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVY 429 (523)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCCCCCCCCEEE
T ss_conf 99999988742877899942787677789999769999999999853679987999857744502312467778878799
Q ss_pred EECCCCEEEECHHHHHHHHCCCCHHHHHHHHHC-----------CCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 204674012155442244215601225655420-----------388489997899652622889844489899999999
Q gi|254780588|r 216 MLEHAIYSVISPEGAASILWRDSSRAAQAAIAM-----------KIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVG 284 (317)
Q Consensus 216 m~~~s~ysvisPEg~AsILwkd~~~a~eAAeal-----------klTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk 284 (317)
+|++++++||+|||+++|+||+..++.+.++++ .-++....+.|.||+||+ | ..++
T Consensus 430 AwP~a~~~vm~pegaa~i~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~aa~~g~iD~VId-P------------~~TR 496 (523)
T 1on3_A 430 AWPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVID-P------------ADTR 496 (523)
T ss_dssp ECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECC-G------------GGHH
T ss_pred ECCCCEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEC-H------------HHHH
T ss_conf 86755598459999999874121017679899999999999987579999986678884288-7------------9999
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999998589
Q gi|254780588|r 285 EIISQFLSETSTY 297 (317)
Q Consensus 285 ~~i~~~L~~L~~~ 297 (317)
..|.+.|+.+...
T Consensus 497 ~~l~~~l~~~~~k 509 (523)
T 1on3_A 497 RKIASALEMYATK 509 (523)
T ss_dssp HHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999997517
No 9
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=100.00 E-value=2.3e-39 Score=298.77 Aligned_cols=239 Identities=21% Similarity=0.278 Sum_probs=192.8
Q ss_pred HHHHHHCCHHHH-HHHHHHHCCC--CEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCC-----CHHHHHHCCCC
Q ss_conf 888763500223-7999862254--506722753347897299998875380089998458775-----02344202677
Q gi|254780588|r 60 KTQVSRHPNRPH-YIDYINSLFT--HFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSD-----TKSRIKHNFGS 131 (317)
Q Consensus 60 ~v~~aRh~~Rp~-~~dyi~~l~~--df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~-----~~~~~~~n~G~ 131 (317)
...+.+.+.+|| +++.|..++| +|+|++++ |+ +++||||||++|+||.|||+|++.. .+.++.+++|+
T Consensus 313 ~~~vp~~~~~~yD~r~vi~~i~D~~sf~E~~~~--~g--~~vvtG~aRl~G~pVGviAn~~~~~~~~p~~~~~~~~~~G~ 388 (588)
T 3gf3_A 313 YSIIPMNQKRPYDIYEVIARLFDNSEFSEYKKG--YG--PEMVTGLAKVNGLLVGVIANVQGLLMNYPEYKQNSVGIGGK 388 (588)
T ss_dssp HHHSCSSTTCCCCHHHHHHHHSGGGBCEESSTT--SS--TTEEEEEEEETTEEEEEEEECCSEEETCCTTSSSCEEETTE
T ss_pred HHHHHCCCCCCCCHHHHHHHCCCCCCEEEECCC--CC--CCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 765430467777499999864555532320355--57--76326677648947999951455344565433562003786
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC-
Q ss_conf 6836899999999999971994899995353246778430027999999988862379988999961677775421133-
Q gi|254780588|r 132 PRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA- 210 (317)
Q Consensus 132 ~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~- 210 (317)
++|++++|+.|||++|++|+||||||+|||||++|.++|++|+..++|+++.++++++||+||||+|++++||+++++.
T Consensus 389 l~~~aa~Kaarfi~lcd~f~lPlv~lvD~pGf~~G~~~E~~Gii~~gA~~~~A~a~a~vP~isvi~rka~Ggg~~am~~~ 468 (588)
T 3gf3_A 389 LYRQGLIKMNEFVTLCARDRIPLIWLQDTTGIDVGDEAEKAELLGLGQSLIYSIENSKLPSLEITIRKASAAAHYVLGGP 468 (588)
T ss_dssp ECHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHHHCSCEEEEESSEEETTHHHHTTCT
T ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCC
T ss_conf 67778999999998515479876999357887787688871499999999999871799979999787531456652475
Q ss_pred ---CCCEEEECC--CCEEEECHHHHHHHHCCCCH-HHHHHHH-------HC---------CCCHHHHHHCCCCCEEECCC
Q ss_conf ---200022046--74012155442244215601-2256554-------20---------38848999789965262288
Q gi|254780588|r 211 ---ANFVYMLEH--AIYSVISPEGAASILWRDSS-RAAQAAI-------AM---------KIIATDLQDLSIIDGIIPEP 268 (317)
Q Consensus 211 ---~d~v~m~~~--s~ysvisPEg~AsILwkd~~-~a~eAAe-------al---------klTa~DL~~lGiID~II~EP 268 (317)
+|.++||++ +-++||.|||++.|+||... +++++.+ .+ ..++...-+.+.||+||+
T Consensus 469 ~~~~d~~~a~~~p~a~~~vm~~ega~~i~~~~e~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~aa~~~~vD~vId-- 546 (588)
T 3gf3_A 469 QGNNTNVFSIGTGACEYYVMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMIQMYTDKSRPKYCTEKGMVDEIVD-- 546 (588)
T ss_dssp TCTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHTTSHHHHHHTTSSSEECC--
T ss_pred CCCCCEEEECCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEC--
T ss_conf 568864687678876284258999999999999975316771445899999999999998469999986578781278--
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH------HHHHHHHHHHHHHHCC
Q ss_conf 9844489899999999999999999858998------9999999999997248
Q gi|254780588|r 269 IGGAHRNPAQTISSVGEIISQFLSETSTYSE------TEIREHRRQKYLNIGR 315 (317)
Q Consensus 269 ~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~------~~Li~~R~~Kf~~iG~ 315 (317)
| ...|..|...|+.+..... ..++-++..+|..+|+
T Consensus 547 -------P----~~TR~~l~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 588 (588)
T 3gf3_A 547 -------M----TEVRPYIQAFTEAAYQNPQSICPMHQMLTPRSTREFETFGK 588 (588)
T ss_dssp -------G----GGHHHHHHHHHHHHTTSCSCCCCGGGCSHHHHHHHHHHHC-
T ss_pred -------H----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf -------3----99999999999999858766687546788431100024469
No 10
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=100.00 E-value=8.4e-38 Score=287.74 Aligned_cols=221 Identities=19% Similarity=0.238 Sum_probs=182.9
Q ss_pred HHHHCCHHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCH------HHHHHCCCCC
Q ss_conf 8763500223-79998622545--0672275334789729999887538008999845877502------3442026776
Q gi|254780588|r 62 QVSRHPNRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTK------SRIKHNFGSP 132 (317)
Q Consensus 62 ~~aRh~~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~------~~~~~n~G~~ 132 (317)
.+.+.+.+|| +++.|..++|+ |+|+..+ |+ +++||||||++|+||+|||+|++.... .++.+++|.+
T Consensus 312 ~vp~d~~~~yd~r~vi~~i~D~~~f~E~~~~--~g--~~iVtG~aRl~G~pVGVIAn~~~~~~~~~~~~a~~~~~~gG~l 387 (587)
T 1pix_A 312 MVPLNDKRAYDIYNVIARLFDNSELHEYKKG--YG--PEMVTGLAKVNGLLVGVVANVQGLLMNYPEYKAAGSVGIGGKL 387 (587)
T ss_dssp HSCSSTTSCCCHHHHHHTTSGGGBCEESSTT--SS--TTEEEEEEEETTEEEEEEEECCSEETTCCTTSCTTCCEETTEE
T ss_pred CCCCCCCCCCCCEECCCCCCCCHHHHCCCCC--CC--CCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 1444555676630000002332011013566--78--8537899986796799995255434455432223333568966
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC--
Q ss_conf 836899999999999971994899995353246778430027999999988862379988999961677775421133--
Q gi|254780588|r 133 RPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAA-- 210 (317)
Q Consensus 133 ~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~-- 210 (317)
+|++++|+.|||++|++|+||||+|+|||||++|.++|+.|+..++|+++.++++++||+||||+|++++||+++++.
T Consensus 388 ~~~sa~Kaarfi~lcd~~~iPlv~lvD~pGf~~G~~~E~~Giir~gA~l~~A~a~a~vP~itvi~rkayGga~~am~~~~ 467 (587)
T 1pix_A 388 YRQGLVKMNEFVTLCARDRLPIVWIQDTTGIDVGNDAEKAELLGLGQSLIYSIQTSHIPQFEITLRKGTAAAHYVLGGPQ 467 (587)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEECCCEECCSHHHHHTTHHHHHHHHHHHHHTCCCCEEEEECSEEETTHHHHTTCTT
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCC
T ss_conf 87899999999998764299668971588878876999988999999999888737999799997985316778734765
Q ss_pred --CCCEE--EECCCCEEEECHHHHHHHHCCCCHHH-HHHH-------HHC---------CCCHHHHHHCCCCCEEECCCC
Q ss_conf --20002--20467401215544224421560122-5655-------420---------388489997899652622889
Q gi|254780588|r 211 --ANFVY--MLEHAIYSVISPEGAASILWRDSSRA-AQAA-------IAM---------KIIATDLQDLSIIDGIIPEPI 269 (317)
Q Consensus 211 --~d~v~--m~~~s~ysvisPEg~AsILwkd~~~a-~eAA-------eal---------klTa~DL~~lGiID~II~EP~ 269 (317)
+|.++ .|+.+.++|++|||++.|+|++...+ ++++ +.+ ..++....+.|.||+||+ |
T Consensus 468 ~~~~~~~~~a~p~a~i~vm~~e~av~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~aa~~g~vD~iId-P- 545 (587)
T 1pix_A 468 GNDTNAFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVD-M- 545 (587)
T ss_dssp CTTTEEEEEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTSHHHHHHHTSSSEECC-T-
T ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEC-H-
T ss_conf 68861377218876261579999999998887652214452445899999999999987369999997288681288-3-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 844489899999999999999999858998
Q gi|254780588|r 270 GGAHRNPAQTISSVGEIISQFLSETSTYSE 299 (317)
Q Consensus 270 GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~ 299 (317)
...|+.|...|+.+.+.+.
T Consensus 546 -----------~~TR~~l~~~l~~~~~~~~ 564 (587)
T 1pix_A 546 -----------NKIRGYVEAFTEAAYQNPE 564 (587)
T ss_dssp -----------TTHHHHHHHHHHHHTTSCS
T ss_pred -----------HHHHHHHHHHHHHHHHCCC
T ss_conf -----------9999999999999985866
No 11
>3ff6_A Acetyl-COA carboxylase 2; ACC2, ACC, metabolic disorder, fatty acid metabolism, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis; HET: RCP; 3.19A {Homo sapiens}
Probab=100.00 E-value=7.6e-37 Score=280.94 Aligned_cols=200 Identities=18% Similarity=0.205 Sum_probs=165.9
Q ss_pred HHHCCHHHH-HHHHHHHCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCC-------------CHHHHH
Q ss_conf 763500223-79998622545--06722753347897299998875380089998458775-------------023442
Q gi|254780588|r 63 VSRHPNRPH-YIDYINSLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSD-------------TKSRIK 126 (317)
Q Consensus 63 ~aRh~~Rp~-~~dyi~~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~-------------~~~~~~ 126 (317)
+.....+|+ ..+++..+||+ |+|++++ |+ +++|||+||++|+||.|||++++.. ....+.
T Consensus 357 ~~~~~~~~~d~~~~i~~i~D~gsf~E~~~~--~a--~~vVtG~ARLgG~pVGVIAne~~~~~~~~padpa~~~s~~~~~~ 432 (760)
T 3ff6_A 357 MLAGRPHPTLKGTWQSGFFDHGSFKEIMAP--WA--QTVVTGRARLGGIPVGVIAVETRTVEVAVPADPANLDSEAKIIQ 432 (760)
T ss_dssp HHHCEECTTSSSCEECCSSCTTCCEEESTT--SS--TTEEEEEEEETTEEEEEEEECCSCEEEEECCCTTCSSCCCEEEE
T ss_pred CCCCCCCCCHHHHHHHEEEECCCCEECCCC--CC--CCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 124677663024331001115740101146--64--76588999999988999975675344556778555312566665
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf 02677683689999999999997199489999535324677843002799999998886237998899996167777542
Q gi|254780588|r 127 HNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAM 206 (317)
Q Consensus 127 ~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~ 206 (317)
+++|++.|+|++|+.|+|++|++|+||||+|+|||||++|.++|+.|+..++|+.+.++++++||+|+||+|+|++||+.
T Consensus 433 ~~GGv~~pdsa~KaArfI~lcd~~~lPLv~LvD~pGF~~G~~~E~~Gilk~GA~iv~Ala~~~vP~itvI~~~g~~~GGa 512 (760)
T 3ff6_A 433 QAGQVWFPDSAYKTAQAIKDFNREKLPLMIFANWRGFSGGMKDMYDQVLKFGAYIVDGLRQYKQPILIYIPPYAELRGGS 512 (760)
T ss_dssp ECTTCBCHHHHHHHHHHHHHHHHTTCCEEEECCCCCBCCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECTTCEEEHHH
T ss_pred HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCC
T ss_conf 31782557999999999998454699859995488766668999848999999999999708998799995873533644
Q ss_pred CCCC-------CCCEEEECCCCEEEECHHHHHHHHCCCCHHHHHHH----------------------------------
Q ss_conf 1133-------20002204674012155442244215601225655----------------------------------
Q gi|254780588|r 207 GIAA-------ANFVYMLEHAIYSVISPEGAASILWRDSSRAAQAA---------------------------------- 245 (317)
Q Consensus 207 a~~~-------~d~v~m~~~s~ysvisPEg~AsILwkd~~~a~eAA---------------------------------- 245 (317)
.+.+ .+.++++++|.++|++|||++.|++|+...++..+
T Consensus 513 ~vv~~~~~~~~~~~vyAwp~A~~gVl~pegav~I~fr~~~~~~~~~r~d~~~~~l~~~l~~~~~~~~~~~~~~~~~~~re 592 (760)
T 3ff6_A 513 WVVIDATINPLCIEMYADKESRGGVLEPEGTVEIKFRKKDLIKSMRRIDPAYKKLMEQLGEPDLSDKDRKDLEGRLKARE 592 (760)
T ss_dssp HHTTCGGGSTTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHHCGGGGHHHHHHTSCCCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 46416655776655888662006347899987867501544433310005677888874144433567888999999999
Q ss_pred --------------HHCCCCHHHHHHCCCCCEEEC
Q ss_conf --------------420388489997899652622
Q gi|254780588|r 246 --------------IAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 246 --------------ealklTa~DL~~lGiID~II~ 266 (317)
+.+.-|+..+.+.|+||+||+
T Consensus 593 ~~l~~~y~~va~~fadlhd~~~raa~~G~Id~vI~ 627 (760)
T 3ff6_A 593 DLLLPIYHQVAVQFADFHDTPGRMLEKGVISDILE 627 (760)
T ss_dssp HHHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEEEC
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
T ss_conf 88778889999999985168999996581773058
No 12
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, cytoplasm, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=100.00 E-value=6.4e-35 Score=267.27 Aligned_cols=212 Identities=16% Similarity=0.195 Sum_probs=166.9
Q ss_pred HHHH-HHHHHH----------HCCCC--EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCC-------------CC
Q ss_conf 0223-799986----------22545--0672275334789729999887538008999845877-------------50
Q gi|254780588|r 68 NRPH-YIDYIN----------SLFTH--FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGS-------------DT 121 (317)
Q Consensus 68 ~Rp~-~~dyi~----------~l~~d--f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~-------------~~ 121 (317)
.+|| .++.|. .+||+ |+|++++ |+ +++||||||++|+||+|||+|... +.
T Consensus 363 ~~pyD~r~vI~~~~~~~~~~~~i~D~~sF~E~~~~--~a--~~vVtG~ARLgG~pVGVIAn~~~~~~g~~~aDpa~~~s~ 438 (758)
T 3k8x_A 363 DETYDVRWMIEGRETESGFEYGLFDKGSFFETLSG--WA--KGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSA 438 (758)
T ss_dssp SSCCCHHHHHHCEEETTEEECCSSCTTCCEEESTT--SC--TTEEEEEEEETTEEEEEEEECCSCEEEEECCCTTSTTCC
T ss_pred CCCCCCEEEECCCCCCCCCCEEEEECCCEEECCCC--CC--CCEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCH
T ss_conf 88986405640567765444057726642422466--65--754899999999789999756652335456874454203
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHH-HHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 23442026776836899999999-99997199489999535324677843002799999998886237998899996167
Q gi|254780588|r 122 KSRIKHNFGSPRPEGYRKAVRLM-EMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEG 200 (317)
Q Consensus 122 ~~~~~~n~G~~~p~g~rKa~r~~-~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg 200 (317)
.....+++|++.|+++.|+.|++ ++|++|+||||+|+|||||++|.++|++|+..++|+++.++++++||+|+||+|.|
T Consensus 439 ~~~~~~aGgv~~p~sa~K~ArfI~~lcd~~~LPLv~LvDtpGF~~G~~aE~~Giik~GA~iv~Ala~a~vP~itvI~~~g 518 (758)
T 3k8x_A 439 ETLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQPIIIYIPPTG 518 (758)
T ss_dssp CEEEEECTTEECHHHHHHHHHHHHHHHHTSCCCEEECCCCCEECCSHHHHHTTHHHHHHHHHHHHHTCCSCEEEEECTTC
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 34443057856706899999999999861288669997188877678999833999999999999758998799994774
Q ss_pred -CCCCCCCCCCC----C--CEEEECCCCEEEECHHHHHHHHCCCCHHHHH--------------------HHH-------
Q ss_conf -77754211332----0--0022046740121554422442156012256--------------------554-------
Q gi|254780588|r 201 -GSGGAMGIAAA----N--FVYMLEHAIYSVISPEGAASILWRDSSRAAQ--------------------AAI------- 246 (317)
Q Consensus 201 -~sGGA~a~~~~----d--~v~m~~~s~ysvisPEg~AsILwkd~~~a~e--------------------AAe------- 246 (317)
..|||++...+ + .+++|++|.++|++|||++.|+||+....+. ||+
T Consensus 519 ~~~GGayvv~~~~~~~~~~~vyAwp~A~~gVm~pEgav~I~fR~e~~~~~~~r~d~~~~el~~~l~~~~~aae~~~~~~~ 598 (758)
T 3k8x_A 519 ELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYRELRSQLSNKSLAPEVHQQISK 598 (758)
T ss_dssp EEETHHHHTTCGGGSTTTEEEEEETTCEEESSCHHHHHHHHSCHHHHHHHHHHHCSCCCCC-------------------
T ss_pred EECCHHHHHCCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 45121254237654776553778672038817899998978164110035221699999999986394326566888999
Q ss_pred ---------------------HCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf ---------------------203884899978996526228898444898999999999999
Q gi|254780588|r 247 ---------------------AMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVGEIIS 288 (317)
Q Consensus 247 ---------------------alklTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i~ 288 (317)
.|.-|+..+++.|+||+||+ |- ....-++..|+.-|.
T Consensus 599 ~~~~re~~l~~~y~~va~~fa~lhd~~~rm~a~G~I~~vi~-~~----~tR~~~~~~l~r~l~ 656 (758)
T 3k8x_A 599 QLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELE-WT----EARRFFFWRLRRRLN 656 (758)
T ss_dssp ---------HHHHHHHHHHHHHTTSBHHHHHHHTCSSEEEC-GG----GHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC-HH----HHHHHHHHHHHHHHH
T ss_conf 99999998778899999999983085877875283773328-78----879999999999986
No 13
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=99.95 E-value=1.8e-28 Score=221.47 Aligned_cols=236 Identities=14% Similarity=0.149 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC--EEEECCCCCCCCC----CEEEEEEEEEC
Q ss_conf 69999999999999999974269999988876350022379998622545--0672275334789----72999988753
Q gi|254780588|r 33 FSEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINSLFTH--FISLAGDRLFGDD----PAMQIGLARFH 106 (317)
Q Consensus 33 ~~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~GDr~~~dD----~aii~G~a~i~ 106 (317)
..+++.+++++++++.++.+....++++.. + ..|.+.++.|+.|+|+ |.|++......+| -++|+|+|+|+
T Consensus 27 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~--rGkltaReRI~~L~D~gSF~E~~~l~~~~~~~~~~~~vV~G~G~I~ 103 (587)
T 1pix_A 27 NEEQLKKIEEEIHQLIKEAQEAGKADADVN-K--RGELTALQRIEKLVEPGSWRPLNTLFNPQGNKNGSVAIVKGLGRVN 103 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSCHHHHH-H--TTCCCHHHHHHHHSCTTCCEEESTTCCTTCCTTSCCSEEEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-H--HCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEC
T ss_conf 799999999999999999986488578798-6--0899999999985499963023144530368899975999999999
Q ss_pred CCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHH---HHHHHHHHH
Q ss_conf 80089998458775023442026776836899999999999971994899995353246778430027---999999988
Q gi|254780588|r 107 GQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQ---GEAIARATE 183 (317)
Q Consensus 107 g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~---~~aia~~l~ 183 (317)
|++|+|++||.. ..+|+++|.+++|..|++++|.++++|+|+|+|++||.++.+.+..++ +..+..++.
T Consensus 104 Gr~v~v~a~D~t--------v~gGs~g~~~~~K~~r~~~lA~~~~lP~I~l~ds~Garl~e~~~~~~~~~~~g~~~~~~~ 175 (587)
T 1pix_A 104 GKWCVVVASDNK--------KLAGAWVPGQAECLLRASDTAKTLHVPLVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNA 175 (587)
T ss_dssp TEEEEEEEECTT--------TTTTEECTTHHHHHHHHHHHHHHHTCCEEEEECCCEECGGGHHHHSSSTTSTTHHHHHHH
T ss_pred CEEEEEEEECCC--------CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999998682--------115087878989999999999982999899955788766651344100545649999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCC---CCHHHHHHHHH-------CCCCHH
Q ss_conf 86237998899996167777542113320002204674012155442244215---60122565542-------038848
Q gi|254780588|r 184 MCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASILWR---DSSRAAQAAIA-------MKIIAT 253 (317)
Q Consensus 184 ~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsILwk---d~~~a~eAAea-------lklTa~ 253 (317)
.++...||+|++|+|++++|||+..+.+|.++|.++|...+.+|.--...--+ +...+.+...+ --|-..
T Consensus 176 ~~s~~~vP~Isvv~G~~~gGgA~~~~s~~~ii~~~~s~i~laGP~vi~~~~~~~~~~~~~~~~v~~~~g~~~~~e~LGGa 255 (587)
T 1pix_A 176 ELNQLGIPVIVGIYGTNPAGGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDRTGKTEPPGAV 255 (587)
T ss_dssp HHHHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHHHHHTTCCCCCSSBH
T ss_pred HHHCCCCCEEEECCCCCCCCCCHHHHHCEEEEEECCEEEEECCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCH
T ss_conf 98469985675035786764201100021688724437995070564203443322323442011000443441025624
Q ss_pred HH--HHCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99--97899652622889844489899999999999
Q gi|254780588|r 254 DL--QDLSIIDGIIPEPIGGAHRNPAQTISSVGEII 287 (317)
Q Consensus 254 DL--~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i 287 (317)
++ .+.|++|.+.+ |-.+.+..++..+
T Consensus 256 ~iH~~~sGv~d~va~--------de~~a~~~ir~~l 283 (587)
T 1pix_A 256 DIHYTETGFMREVYA--------SEEGVLEGIKKYV 283 (587)
T ss_dssp HHHTTTSCCSCEEES--------SHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCEEEC--------CHHHHHHHHHHHH
T ss_conf 343310487641224--------6799999999998
No 14
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=99.90 E-value=4.7e-21 Score=168.91 Aligned_cols=216 Identities=19% Similarity=0.173 Sum_probs=164.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC--EEEECC-----CCCCCC------CCEE
Q ss_conf 769999999999999999974269999988876350022379998622545--067227-----533478------9729
Q gi|254780588|r 32 DFSEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINSLFTH--FISLAG-----DRLFGD------DPAM 98 (317)
Q Consensus 32 ~~~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~G-----Dr~~~d------D~ai 98 (317)
....++++|+++.+.. .+...-++|+.-+..+|...++.|+.|+|+ |+|+.. +..++. .-++
T Consensus 11 ~~~~~~~~l~~~~~~~-----~~~gg~~~v~r~~~~GkltaReRI~~LlD~gSF~E~g~~~~~~~~~~~~~~~~~~~dgv 85 (523)
T 1on3_A 11 TMEGRVEQLAEQRQVI-----EAGGGERRVEKQHSQGKQTARERLNNLLDPHSFDEVGAFRKHRTTLFGMDKAVVPADGV 85 (523)
T ss_dssp SHHHHHHHHHHHHHHH-----HTTTCHHHHHHHHHTTCCCHHHHHHHHSCTTCCEEECTTCCCCCCTTTTTTCCCGGGGE
T ss_pred HHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCCCCEE
T ss_conf 9999999999999999-----86589999999997399989999999639997557401227576521234564788749
Q ss_pred EEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHH
Q ss_conf 99988753800899984587750234420267768368999999999999719948999953532467784300279999
Q gi|254780588|r 99 QIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAI 178 (317)
Q Consensus 99 i~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~ai 178 (317)
|+|+|+|+|++|+|++++.. ..+|.+.+...+|..|++++|.+.++|+|.|+|+.|+....+.+.-.+...+
T Consensus 86 v~G~G~I~Gr~v~v~a~D~t--------v~gGs~g~~~~~K~~~~~~~A~~~~~P~V~l~dsgG~rl~e~~~~l~~~~~~ 157 (523)
T 1on3_A 86 VTGRGTILGRPVHAASQDFT--------VMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGGARIQEGIDSLSGYGKM 157 (523)
T ss_dssp EEEEEEETTEEEEEEEECTT--------TGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHHH
T ss_pred EEEEEEECCEEEEEEEECCC--------EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCHH
T ss_conf 99999999999999997586--------7363778888778988999998668988999806898665442203212599
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHC
Q ss_conf 99988862379988999961677775421133200022046740121554422442156012256554203884899978
Q gi|254780588|r 179 ARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDL 258 (317)
Q Consensus 179 a~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~l 258 (317)
..++..++.. ||+|++|+|.+.+|+|+.++++|.++|.++|...+-+|.--....-.+.+ ++.+.=....+...
T Consensus 158 ~~~~~~~sg~-vP~Isvv~G~~~gG~a~~~~~~d~vIm~~~a~l~l~GP~vV~~~~ge~v~-----~eelGGa~~h~~~s 231 (523)
T 1on3_A 158 FFANVKLSGV-VPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFITGPQVIKSVTGEDVT-----ADELGGAEAHMAIS 231 (523)
T ss_dssp HHHHHHHTTT-SCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESSCHHHHHHHHCCCCC-----HHHHHSHHHHHHTT
T ss_pred HHHHHHHCCC-CCEEEEEECCCCCCCEECCCCCCEEEEECCEEEEECCCHHHHHHCCCCCC-----HHHCCCHHHHHHHC
T ss_conf 9999985077-97799970788634020012383899815604884280877875078679-----68802587887612
Q ss_pred CCCCEEEC
Q ss_conf 99652622
Q gi|254780588|r 259 SIIDGIIP 266 (317)
Q Consensus 259 GiID~II~ 266 (317)
|++|.+.+
T Consensus 232 G~~d~v~~ 239 (523)
T 1on3_A 232 GNIHFVAE 239 (523)
T ss_dssp CCCSEEES
T ss_pred CCCCEEEC
T ss_conf 76633413
No 15
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=99.90 E-value=3.2e-22 Score=177.18 Aligned_cols=232 Identities=16% Similarity=0.231 Sum_probs=154.2
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC--EEEECC-----CCCCCCCCEEEEEEEEECC
Q ss_conf 999999999999999974269999988876350022379998622545--067227-----5334789729999887538
Q gi|254780588|r 35 EEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINSLFTH--FISLAG-----DRLFGDDPAMQIGLARFHG 107 (317)
Q Consensus 35 ~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~G-----Dr~~~dD~aii~G~a~i~g 107 (317)
+++.++.+++.+..++....- .+.++..+...|...++.|+.|+|+ |+|++. +..+..| ++|+|+|+|+|
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~g--~~~~~k~h~rGkltaRERI~~LlD~gSF~E~~~l~~~~~~~~~~~-gvV~G~G~I~G 105 (588)
T 3gf3_A 29 QEIKAVESDIHESIKKALDAG--ITSEEKLNERGQLSAMQRINALIDPGTWCPLNSLFNPENNKFGTT-NIVNGLGRVDG 105 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHHCS--SSCHHHHHHTTCCCHHHHHHHHSCTTCCEEESTTCCTTCCTTSSC-SEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC-CEEEEEEEECC
T ss_conf 999999999999999987367--767998997199999999999658997501266672046888998-68999999999
Q ss_pred CEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC----HHHHHHHHHHHH
Q ss_conf 0089998458775023442026776836899999999999971994899995353246778430----027999999988
Q gi|254780588|r 108 QPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEA----RGQGEAIARATE 183 (317)
Q Consensus 108 ~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~----~G~~~aia~~l~ 183 (317)
++|+|++||-. ..+|++++.+.+|.+|++++|.++++|+|+|+|++|+..+.+.+. .+ ...+..+..
T Consensus 106 r~V~V~a~D~t--------v~gGS~g~~~~~K~~r~~e~A~~~~lP~V~l~dsgGaRl~e~~~~~~~~~~-~g~~~~~~~ 176 (588)
T 3gf3_A 106 KWVYIVASDNK--------KMAGAWVPGQAENLIRCSDAAKMMHLPLIYLLNCSGVEFPNQDKVYPNRRG-GGTPFFRNS 176 (588)
T ss_dssp EEEEEEEECTT--------SGGGCBCTTHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGHHHHSSSTTS-TTHHHHHHH
T ss_pred EEEEEEEECCC--------CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHH-HHHHHHHHH
T ss_conf 99999999782--------115697878989999999999985989799944787666654223530444-438999999
Q ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCC---CCHHHHHHH------HHC---CCC
Q ss_conf 86237998899996167777542113320002204674012155442244215---601225655------420---388
Q gi|254780588|r 184 MCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASILWR---DSSRAAQAA------IAM---KII 251 (317)
Q Consensus 184 ~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsILwk---d~~~a~eAA------eal---klT 251 (317)
+++...||+|++|+|.+.+|||+..+.+|.++|.+++...+..|.--..-.-+ +..-.++.. +.+ .+-
T Consensus 177 ~~s~~~iP~Isvv~G~~~gG~a~~a~s~~~ii~~~~a~i~l~GP~vv~~~~g~~~~~~~~g~~~~~~~~~~e~l~~~~lg 256 (588)
T 3gf3_A 177 ELNQLGIPVIVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKGYIDDEAAEQIIAAQIENSKLKVPAPG 256 (588)
T ss_dssp HHHHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC---------------CHHHHHHHHHHHHTTCCCTT
T ss_pred HHHCCCCCEEEEECCCCCCCCCEEECCCCCCEEECCEEEEECCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 98569997799945776666530120465323524347997282353035774334311245554300222210234577
Q ss_pred HHHH--HHCCCCCEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf 4899--9789965262288984448989999999999
Q gi|254780588|r 252 ATDL--QDLSIIDGIIPEPIGGAHRNPAQTISSVGEI 286 (317)
Q Consensus 252 a~DL--~~lGiID~II~EP~GGAHrd~~~~~~~lk~~ 286 (317)
..++ .+.|++|.+.+ |-......+++.
T Consensus 257 ga~~h~~~sGv~d~va~--------de~~a~~~~r~~ 285 (588)
T 3gf3_A 257 SVPIHYDETGFFREVYQ--------NDLGVIDGIKKY 285 (588)
T ss_dssp BHHHHTTTSCCSCEEES--------SHHHHHHHHHHH
T ss_pred CHHHHHHCCCCCCCCCC--------CHHHHHHHHHHH
T ss_conf 43544202465410247--------879999988889
No 16
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=99.88 E-value=4.8e-20 Score=161.76 Aligned_cols=226 Identities=18% Similarity=0.189 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC--EEEECC---CCCC--C------CCCEEEE
Q ss_conf 9999999999999999974269999988876350022379998622545--067227---5334--7------8972999
Q gi|254780588|r 34 SEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINSLFTH--FISLAG---DRLF--G------DDPAMQI 100 (317)
Q Consensus 34 ~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~G---Dr~~--~------dD~aii~ 100 (317)
..+|.+|+++.+... ....-++|...+..+|...++.|+.|+|+ |+|+.. .+.+ . -+-++|+
T Consensus 26 ~~~l~~l~~r~~~~~-----~~gg~~~v~~~~~~GkltaRERI~~LlD~gSF~E~g~la~~~~~~~~~~~~~~~~dgvV~ 100 (548)
T 2bzr_A 26 AGKLAELHKRREESL-----HPVGEDAVEKVHAKGKLTARERIYALLDEDSFVELDALAKHRSTNFNLGEKRPLGDGVVT 100 (548)
T ss_dssp HHHHHHHHHHHHHHT-----STTCHHHHHHHHHTTCCCHHHHHHHHSCTTCCEEESTTCCCCCCSTTGGGCCCTTTTEEE
T ss_pred HHHHHHHHHHHHHHH-----HCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECHHHCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 999999999999998-----627999999999739999999999860899864841010756666464445688875999
Q ss_pred EEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98875380089998458775023442026776836899999999999971994899995353246778430027999999
Q gi|254780588|r 101 GLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIAR 180 (317)
Q Consensus 101 G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~ 180 (317)
|+|+|+|++|+|+++|.. ..+|.+.+...+|..|++++|.+.++|+|+|+|+.|+....+.....+...++.
T Consensus 101 G~G~I~Gr~vvv~a~D~t--------v~gGS~g~~~~~Ki~r~~elA~~~~lP~V~l~dSgGarlqeg~~~l~~~~~~~~ 172 (548)
T 2bzr_A 101 GYGTIDGRDVCIFSQDAT--------VFGGSLGEVYGEKIVKVQELAIKTGRPLIGINDGAGARIQEGVVSLGLYSRIFR 172 (548)
T ss_dssp EEEEETTEEEEEEEECTT--------SGGGCCCHHHHHHHHHHHHHHHHHTCCEEEEECCCSCCGGGTTHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEEECCC--------CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCHHHHHH
T ss_conf 999999999999998787--------706684788999999999999971998799961577556654001432058999
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE-CCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCC
Q ss_conf 9888623799889999616777754211332000220-467401215544224421560122565542038848999789
Q gi|254780588|r 181 ATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYML-EHAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDLS 259 (317)
Q Consensus 181 ~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~-~~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~lG 259 (317)
+. ..+...||+|++|+|.+++|||+.++++|.++|. +.|...+.+|.--..-.-.+.+ ++.+.=....+...|
T Consensus 173 ~~-~~~s~~iP~Isvv~Gp~~gG~a~~~a~~d~vIm~~~~a~i~~aGP~vv~~atge~~~-----~eelGga~~h~~~sG 246 (548)
T 2bzr_A 173 NN-ILASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFITGPDVIKTVTGEEVT-----MEELGGAHTHMAKSG 246 (548)
T ss_dssp HH-HHTTTTSCEEEEECSEEESGGGHHHHHSSEEEEETTTCEEESSCHHHHHHHHCCCCC-----HHHHHBHHHHHHTSS
T ss_pred HH-HHHCCCCCEEEEECCCCCCCCEEEHHHCCEEEEEECCCEEEECCHHHHHHHHCCCCC-----HHHHCCHHEEEECCC
T ss_conf 99-997589977999627876441322333864899714633650478899997478768-----566067102640466
Q ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf 965262288984448989999999999
Q gi|254780588|r 260 IIDGIIPEPIGGAHRNPAQTISSVGEI 286 (317)
Q Consensus 260 iID~II~EP~GGAHrd~~~~~~~lk~~ 286 (317)
++|.+.+ |-.+.++.++..
T Consensus 247 ~~d~~~~--------de~~a~~~~r~~ 265 (548)
T 2bzr_A 247 TAHYAAS--------GEQDAFDYVREL 265 (548)
T ss_dssp CCSEEES--------SHHHHHHHHHHH
T ss_pred CCCCCCC--------CHHHHHHHHHHH
T ss_conf 5568779--------999999999999
No 17
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.30A {Thermotoga maritima MSB8} SCOP: c.14.1.4 c.14.1.4
Probab=99.87 E-value=1.5e-19 Score=158.15 Aligned_cols=223 Identities=22% Similarity=0.278 Sum_probs=160.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC--EEEECC---CCC--CC-C-----CCE
Q ss_conf 7769999999999999999974269999988876350022379998622545--067227---533--47-8-----972
Q gi|254780588|r 31 EDFSEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINSLFTH--FISLAG---DRL--FG-D-----DPA 97 (317)
Q Consensus 31 ~~~~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~G---Dr~--~~-d-----D~a 97 (317)
....+++++|+++..... +..--++|..-+..+|.+.++.|+.|+|+ |+|+.- .+. +. + ..+
T Consensus 13 m~~~~~i~el~~r~~~~~-----~~Gg~~~v~k~~~~GkltaRERi~~LlD~gSF~E~g~l~~~~~~~~~~~~~~~~~dg 87 (527)
T 1vrg_A 13 MSLRDKIEELKKIEKEIE-----QGGGPEKVEKQHRAGKLTAWERLELLLDPGTFVEIDKFVEHRNTYFGLDKVKLPRDG 87 (527)
T ss_dssp CCHHHHHHHHHHHHHHHH-----TTTCHHHHHHHHHTTCCCHHHHHHHHSCTTCCEEECTTCCCCCCGGGGGGCCCGGGG
T ss_pred CCHHHHHHHHHHHHHHHH-----HCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 668999999999999999-----748999999999729999999999965799874775431547755453345588871
Q ss_pred EEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 99998875380089998458775023442026776836899999999999971994899995353246778430027999
Q gi|254780588|r 98 MQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEA 177 (317)
Q Consensus 98 ii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~a 177 (317)
+|+|+|+|+|++|+|++++.. ..+|.+.+...+|..|.+++|.+.++|+|.|+|+.|+....+.+--.+...
T Consensus 88 vV~G~G~I~Gr~v~v~a~D~t--------v~gGS~g~~~~~k~~~~~~~A~~~~lPlV~l~~sgGar~~eg~~~l~~~g~ 159 (527)
T 1vrg_A 88 VITGVGEINGRKVAVFSQDFT--------VMGGSLGEMHAKKIVKLLDLALKMGIPVIGINDSGGARIQEGVDALAGYGE 159 (527)
T ss_dssp EEEEEEEETTEEEEEEEECTT--------TGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECSBCGGGTHHHHHHHHH
T ss_pred EEEEEEEECCEEEEEEEECCC--------EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 899999999999999998787--------704077889999999999999965998899855788776555421244069
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEE-CCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHH-
Q ss_conf 9999888623799889999616777754211332000220-46740121554422442156012256554203884899-
Q gi|254780588|r 178 IARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYML-EHAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDL- 255 (317)
Q Consensus 178 ia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~-~~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL- 255 (317)
+......++ ..||+|++|+|.+.+|+|+.++++|.++|. +.|...+.+|--- +++-.-.+++.+|
T Consensus 160 i~~~~~~~s-g~vP~Isvv~Gp~~GG~A~~~~~~d~vim~~~~a~i~~aGP~vV------------~~~tGe~v~~eelG 226 (527)
T 1vrg_A 160 IFLRNTLAS-GVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMFITGPNVI------------KAVTGEEISQEDLG 226 (527)
T ss_dssp HHHHHHHHT-TTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCBCBSSCHHHH------------HHHHCCCCCHHHHH
T ss_pred HHHHHHHHC-CCCCEEEEECCCCCCHHHHHHHHCCEEEEECCCCEEEECCHHHH------------HHHCCCCCCHHHCC
T ss_conf 999999966-99988999417876078777886885899617745871477889------------88607625856557
Q ss_pred ------HHCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf ------97899652622889844489899999999999
Q gi|254780588|r 256 ------QDLSIIDGIIPEPIGGAHRNPAQTISSVGEII 287 (317)
Q Consensus 256 ------~~lGiID~II~EP~GGAHrd~~~~~~~lk~~i 287 (317)
...|++|.+.+ +-...+..+++.+
T Consensus 227 G~~~h~~~sG~~~~~~~--------~e~~a~~~~r~~l 256 (527)
T 1vrg_A 227 GAMVHNQKSGNAHFLAD--------NDEKAMSLVRTLL 256 (527)
T ss_dssp BHHHHHHTSCCCSEEES--------SHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCEEEC--------CHHHHHHHHHHHH
T ss_conf 60476422555305421--------1477999999999
No 18
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 1xny_A* 1xnv_A* 1xo6_A
Probab=99.87 E-value=9.7e-20 Score=159.56 Aligned_cols=227 Identities=15% Similarity=0.200 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCC--EEEECCCCCCC-----------CCCEEEE
Q ss_conf 9999999999999999974269999988876350022379998622545--06722753347-----------8972999
Q gi|254780588|r 34 SEEIRELEAMVCKTLSEIYSKLTPWQKTQVSRHPNRPHYIDYINSLFTH--FISLAGDRLFG-----------DDPAMQI 100 (317)
Q Consensus 34 ~~ei~~Le~k~~~~~~~iy~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~GDr~~~-----------dD~aii~ 100 (317)
..++.+|+++.... .....-+++...+..+|...++.|+.|||+ |+|+...-.+. -..++|+
T Consensus 15 ~~~l~el~~r~~~~-----~~~g~~~~~~~~~~~gkltaReRi~~LlD~gSF~E~g~~a~~~~~~~~~~~~~~~~dgvV~ 89 (530)
T 3iav_A 15 AGKLADLRRRIEEA-----THAGSARAVEKQHAKGKLTARERIDLLLDEGSFVELDEFARHRSTNFGLDANRPYGDGVVT 89 (530)
T ss_dssp HHHHHHHHHHHHHH-----TTCSCHHHHHHHHHTTCCCHHHHHHHHSCTTCCEEESTTCCCCCCGGGGGGCCCTTTTEEE
T ss_pred HHHHHHHHHHHHHH-----HHCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99999999999999-----8718999999999759999999999962899875875332757643220016688975999
Q ss_pred EEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98875380089998458775023442026776836899999999999971994899995353246778430027999999
Q gi|254780588|r 101 GLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIAR 180 (317)
Q Consensus 101 G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~ 180 (317)
|+|+|+|++|+|++++.. ..+|.+.+.+.+|..|++++|.+.++|+|.|+|+.|+....+....++...+.+
T Consensus 90 G~G~I~Gr~v~v~a~Dft--------v~gGS~g~~~~~K~~r~~~~A~~~~lP~V~l~~sgGar~~e~~~~~~~~~~~~~ 161 (530)
T 3iav_A 90 GYGTVDGRPVAVFSQDFT--------VFGGALGEVYGQKIVKVMDFALKTGCPVVGINDSGGARIQEGVASLGAYGEIFR 161 (530)
T ss_dssp EEEEETTEEEEEEEECTT--------SGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEEECCC--------CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHH
T ss_conf 999999999999998686--------424087888989998999999865999899952688776656444555307999
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEC-CCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCC
Q ss_conf 98886237998899996167777542113320002204-67401215544224421560122565542038848999789
Q gi|254780588|r 181 ATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLE-HAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDLS 259 (317)
Q Consensus 181 ~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~-~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~lG 259 (317)
.+..++ ..||+|++|+|.+.+|||+.++++|.++|.+ .|.+.+.+|.-.-.-.-.+- ..+.+.=........|
T Consensus 162 ~~~~~s-~~iP~isvv~G~~~gG~A~~~~~~d~~im~~~~a~i~~aGP~vV~~atge~~-----~~eelGg~~~h~~~sG 235 (530)
T 3iav_A 162 RNTHAS-GVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDV-----GFEELGGARTHNSTSG 235 (530)
T ss_dssp HHHHTT-TTSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESSCHHHHHHHHCCCC-----CHHHHHBHHHHHHTSC
T ss_pred HHHHHC-CCCCEEEEEECCCCCCHHHHHHHCCEEEEECCCCEEEECCHHHHHHHCCCCC-----CHHHCCCHHHEEECCC
T ss_conf 999865-8998899962687624544045377169851675087237488897527888-----8122155122121367
Q ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9652622889844489899999999999
Q gi|254780588|r 260 IIDGIIPEPIGGAHRNPAQTISSVGEII 287 (317)
Q Consensus 260 iID~II~EP~GGAHrd~~~~~~~lk~~i 287 (317)
++|-+.+ |-...+..++..+
T Consensus 236 ~~d~~~~--------de~~a~~~~r~~l 255 (530)
T 3iav_A 236 VAHHMAG--------DEKDAVEYVKQLL 255 (530)
T ss_dssp CCSEEES--------SHHHHHHHHHHHH
T ss_pred CCCCCCC--------CHHHHHHHHHHHH
T ss_conf 4320157--------6788999999999
No 19
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans och 114}
Probab=99.86 E-value=2.6e-19 Score=156.50 Aligned_cols=203 Identities=18% Similarity=0.238 Sum_probs=150.0
Q ss_pred CCCHHHHHHHHHCCHHHHHHHHHHHCCCC--EEEECC---CCC---------CCCCCEEEEEEEEECCCEEEEEEECCCC
Q ss_conf 69999988876350022379998622545--067227---533---------4789729999887538008999845877
Q gi|254780588|r 54 KLTPWQKTQVSRHPNRPHYIDYINSLFTH--FISLAG---DRL---------FGDDPAMQIGLARFHGQPVAIIGQEKGS 119 (317)
Q Consensus 54 ~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~G---Dr~---------~~dD~aii~G~a~i~g~~v~vig~~kG~ 119 (317)
+...-++|...+..+|...++.|+.|||+ |.|+.- .+. ...| ++|+|+|+|+|++|+|++++..
T Consensus 38 ~~Gg~~~v~r~h~~GkltaRERI~~LlD~gSF~E~g~l~~~~~~d~~~~~~~~~~d-gvV~G~G~I~Gr~v~v~a~Dft- 115 (531)
T 3n6r_B 38 LGGGQKRIDAQHGRGKLTARERVDLLLDEGSFEEFDMFVTHRCTDFNMQDQKPAGD-GVVTGWGTINGRVVYVFSQDFT- 115 (531)
T ss_dssp TTTCHHHHHHHHHTTCCCHHHHHHHHSSSSCCEEECTTCCCCCCGGGGGGCCCTTT-TEEEEEEEETTEEEEEEEECTT-
T ss_pred HCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCCCC-EEEEEEEEECCEEEEEEEECCC-
T ss_conf 73899999999975999999999997189987035134354666655334677897-3999999999999999998687-
Q ss_pred CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 50234420267768368999999999999719948999953532467784300279999999888623799889999616
Q gi|254780588|r 120 DTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGE 199 (317)
Q Consensus 120 ~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~ge 199 (317)
..+|.+.+...+|..|++++|.+.++|+|.|+|+.|+....+.+...+...+.+... ..+..||+||+|+|.
T Consensus 116 -------v~GGS~g~~~~~K~~ra~e~A~~~~lPlV~l~dsgGarl~eg~~~l~~~~~~~~~~~-~~s~~iP~Isvv~Gp 187 (531)
T 3n6r_B 116 -------VLGGSVSETHSKKICKIMDMAMQNGAPVIGINDSGGARIQEGVDSLAGYGEVFQRNI-MASGVVPQISMIMGP 187 (531)
T ss_dssp -------SGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCCBCGGGTHHHHHHHHHHHHHHH-HTTTTSCEEEEECSC
T ss_pred -------EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHH-HHCCCCCEEEEEECC
T ss_conf -------633078877889999999999984998799614788775545222344248999999-866899889998168
Q ss_pred CCCCCCCCCCCCCCEEEECC-CCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHH-------HHHCCCCCEEECCCCCC
Q ss_conf 77775421133200022046-74012155442244215601225655420388489-------99789965262288984
Q gi|254780588|r 200 GGSGGAMGIAAANFVYMLEH-AIYSVISPEGAASILWRDSSRAAQAAIAMKIIATD-------LQDLSIIDGIIPEPIGG 271 (317)
Q Consensus 200 g~sGGA~a~~~~d~v~m~~~-s~ysvisPEg~AsILwkd~~~a~eAAealklTa~D-------L~~lGiID~II~EP~GG 271 (317)
+++|||+.++++|.++|.++ +...+.+|---. ++---.+|+.+ ....|++|-+.+
T Consensus 188 ~~Gg~A~~~a~sd~vim~~~~a~if~aGP~vV~------------~a~ge~~~~eelGGa~~h~~~sGv~d~~~~----- 250 (531)
T 3n6r_B 188 CAGGAVYSPAMTDFIFMVKDSSYMFVTGPDVVK------------TVTNEQVSAEELGGATTHTRKSSVADAAFE----- 250 (531)
T ss_dssp CBGGGGHHHHHSSEEEEETTTCBCBSSCHHHHH------------HHHCCCCCHHHHHBHHHHHHTTSCCSEEES-----
T ss_pred CCHHHHHHHHHCCEEEEEECCEEEEECCHHHHH------------HCCCCCCCHHHCCCHHHHHCCCCCCEEEEC-----
T ss_conf 750887337668758997166048833606653------------000256694771447664202464236626-----
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 448989999999999
Q gi|254780588|r 272 AHRNPAQTISSVGEI 286 (317)
Q Consensus 272 AHrd~~~~~~~lk~~ 286 (317)
|-.+.+..++..
T Consensus 251 ---de~ea~~~~r~~ 262 (531)
T 3n6r_B 251 ---NDVEALAEVRRL 262 (531)
T ss_dssp ---SHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHH
T ss_conf ---728999999998
No 20
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase alpha subunit; lyase; 2.20A {Sulfolobus tokodaii str}
Probab=99.85 E-value=8.2e-19 Score=152.99 Aligned_cols=207 Identities=17% Similarity=0.197 Sum_probs=147.7
Q ss_pred HHHHHHHCCHHHHHHHHHHHCCCC--EEEECC---CCCC--------CCCCEEEEEEEEECCCEEEEEEECCCCCCHHHH
Q ss_conf 988876350022379998622545--067227---5334--------789729999887538008999845877502344
Q gi|254780588|r 59 QKTQVSRHPNRPHYIDYINSLFTH--FISLAG---DRLF--------GDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRI 125 (317)
Q Consensus 59 ~~v~~aRh~~Rp~~~dyi~~l~~d--f~el~G---Dr~~--------~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~ 125 (317)
++|+.-+..+|.+.++.|+.|||+ |.|+.. .+.+ ..+-++|+|+|+|+|++|+|++++..
T Consensus 29 ~~v~~~~~~gkltaRERi~~LlD~gSF~E~~~~~~~~~~~~~~~~~~~~~dgvv~G~G~I~Gr~v~v~a~D~t------- 101 (522)
T 1x0u_A 29 ERIQFQHSKGKLTARERLALLFDDGKFNEIMTFATTRATEFGLDKQRFYGDGVVTGWGKVDGRTVFAYAQDFT------- 101 (522)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHSSSSCCEESSSSCCCCCCGGGTTTCCCTTTTEEEEEEEETTEEEEEEEECTT-------
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCCCCEECHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCC-------
T ss_conf 9999999749999999999965899755835221646553354345688985999999999999999998785-------
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 20267768368999999999999719948999953532467784300279999999888623799889999616777754
Q gi|254780588|r 126 KHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGA 205 (317)
Q Consensus 126 ~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA 205 (317)
..+|.+.+.+.+|..|.+++|.+.++|+|.|+|+.|+....+.....+...+.... .+++..+|+|++|+|.+.+|||
T Consensus 102 -v~gGS~g~~~~~K~~~a~e~A~~~~lPlV~l~~SgGar~~eg~~~l~~~~~~~~~~-~~~s~~iP~Isvv~G~~~gG~a 179 (522)
T 1x0u_A 102 -VLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGAVFKMN-VMASGVIPQITIMAGPAAGGAV 179 (522)
T ss_dssp -TGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCSBCGGGTHHHHHHHHHHHHHH-HHHTTTSCEEEEECSEEEGGGG
T ss_pred -EECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHH-HHHCCCCCEEEEECCCCCCCHH
T ss_conf -50427787785786799999985599989996788877776520023421789999-9975899779981478871052
Q ss_pred CCCCCCCCEEEECCCC--EEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHH
Q ss_conf 2113320002204674--01215544224421560122565542038848999789965262288984448989999999
Q gi|254780588|r 206 MGIAAANFVYMLEHAI--YSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSV 283 (317)
Q Consensus 206 ~a~~~~d~v~m~~~s~--ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~l 283 (317)
+.++++|.++|.+++- ..+.+|.--.+..-.+.+ .+.+.=..-...+.|++|-+.+ |-.+.+..+
T Consensus 180 ~~~~~~d~vim~~~~~~~~flaGP~vv~~~~ge~~~-----~~elGga~~h~~~sG~~d~v~~--------de~~a~~~~ 246 (522)
T 1x0u_A 180 YSPALTDFIIMIKGDAYYMFVTGPEITKVVLGEEVS-----FQDLGGAVVHATKSGVVHFMVD--------SEQEAINLT 246 (522)
T ss_dssp HHHHHSSEEEEECSTTCEEESSCHHHHHHTTCCCCC-----HHHHHBHHHHHHTTCCCSEEES--------CHHHHHHHH
T ss_pred HHHHHCCCEEEECCCCEEEEECCCCEEEEECCCCCC-----CCCCCCHHHHHHCCCCCCCCCC--------CHHHHHHHH
T ss_conf 326646721220476237874164101320255446-----1013443354421686410045--------368999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780588|r 284 GEII 287 (317)
Q Consensus 284 k~~i 287 (317)
+..+
T Consensus 247 r~~l 250 (522)
T 1x0u_A 247 KRLL 250 (522)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 21
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.83 E-value=4.8e-19 Score=154.65 Aligned_cols=207 Identities=17% Similarity=0.155 Sum_probs=163.3
Q ss_pred HHCCHHHHHHHHHHHCCCC--EEEECCCC------------CC-----------CCCCEEEEEEEEECCCEEEEEEECCC
Q ss_conf 6350022379998622545--06722753------------34-----------78972999988753800899984587
Q gi|254780588|r 64 SRHPNRPHYIDYINSLFTH--FISLAGDR------------LF-----------GDDPAMQIGLARFHGQPVAIIGQEKG 118 (317)
Q Consensus 64 aRh~~Rp~~~dyi~~l~~d--f~el~GDr------------~~-----------~dD~aii~G~a~i~g~~v~vig~~kG 118 (317)
+-|..|-...++|+.|||+ |.|+.-+- .| +.+.++++|+|+|+|++|+|++++..
T Consensus 49 C~~H~ri~areRi~~l~D~gsf~E~~~~~~~~dpl~f~d~~~y~~~l~~~~~~tg~~d~vv~g~G~I~g~~v~v~a~Dft 128 (304)
T 2f9y_B 49 CDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFA 128 (304)
T ss_dssp TCCBCCCCHHHHHHHHSCSSCCEECSCSCCCCCSSCCSSGGGTC------CCSSCCSSSEEEEECEETTEECBEEEECTT
T ss_pred CCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEEECCH
T ss_conf 98987549999998762498378767876777854565455550668765314488772499999999988899997362
Q ss_pred CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 75023442026776836899999999999971994899995353246778430027999999988862379988999961
Q gi|254780588|r 119 SDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIG 198 (317)
Q Consensus 119 ~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~g 198 (317)
..+|.+++...+|..|++++|.+.++|+|.|+|++|+....+.....|...+...+..+....+|+|+|++|
T Consensus 129 --------~~GGS~g~~~geKi~ra~e~A~~~~lPlI~l~~SgGaRm~eg~~sl~~~~~~~~~~~~~~~~~iP~I~v~~g 200 (304)
T 2f9y_B 129 --------FMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTD 200 (304)
T ss_dssp --------STTTCBCTHHHHHHHHHHHHHHHHTCCEEEEEEESSBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred --------HHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf --------322433244445633599999972997699845888035555520002467999999998189977999668
Q ss_pred CCCCCCCCCCCC-CCCEEEECCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHH
Q ss_conf 677775421133-2000220467401215544224421560122565542038848999789965262288984448989
Q gi|254780588|r 199 EGGSGGAMGIAA-ANFVYMLEHAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPA 277 (317)
Q Consensus 199 eg~sGGA~a~~~-~d~v~m~~~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~ 277 (317)
.+++|+++.+++ +|.++|.++|...+.+|.=-....-.+- + +-+. ++.-+.+.|+||.|++-
T Consensus 201 p~~GG~~as~a~~~d~ii~~~~a~i~~aGP~Vv~~~~ge~l---~---e~~g-~a~~~~~~G~vD~vv~~---------- 263 (304)
T 2f9y_B 201 PTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKL---P---PGFQ-RSEFLIEKGAIDMIVRR---------- 263 (304)
T ss_dssp EEEHHHHTTGGGCCSEEEECTTCBEESSCHHHHHHHHTSCC---C---TTTT-BHHHHGGGTCCSEECCH----------
T ss_pred CCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCC---C---HHHC-CHHHHHHCCCCEEEECC----------
T ss_conf 96613412636477489995540003658666654307738---8---2210-37999867671089798----------
Q ss_pred HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999985899
Q gi|254780588|r 278 QTISSVGEIISQFLSETSTYS 298 (317)
Q Consensus 278 ~~~~~lk~~i~~~L~~L~~~~ 298 (317)
+.++..|.+-+..|..++
T Consensus 264 ---~e~a~~l~~~l~~L~~lP 281 (304)
T 2f9y_B 264 ---PEMRLKLASILAKLMNLP 281 (304)
T ss_dssp ---HHHHHHHHHHHHHHTTCC
T ss_pred ---HHHHHHHHHHHHHHCCCC
T ss_conf ---899999999999972489
No 22
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.81 E-value=2.5e-18 Score=149.57 Aligned_cols=208 Identities=13% Similarity=0.112 Sum_probs=161.8
Q ss_pred HHHCCHHHHHHHHHHHCCCC--EEEECCCCCC--------------------CCCCEEEEEEEEECCCEEEEEEECCCCC
Q ss_conf 76350022379998622545--0672275334--------------------7897299998875380089998458775
Q gi|254780588|r 63 VSRHPNRPHYIDYINSLFTH--FISLAGDRLF--------------------GDDPAMQIGLARFHGQPVAIIGQEKGSD 120 (317)
Q Consensus 63 ~aRh~~Rp~~~dyi~~l~~d--f~el~GDr~~--------------------~dD~aii~G~a~i~g~~v~vig~~kG~~ 120 (317)
-+-|..|-.++++|+.|||+ |.|+..+... +.+-++++|.|+++|++|++.+++.
T Consensus 54 ~C~~H~rl~areRi~~L~D~gsf~Ei~~~~~~~DpL~f~~Y~~rl~~a~~ktg~~d~vi~g~G~i~g~~v~v~~~Df--- 130 (285)
T 2f9i_B 54 NCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDS--- 130 (285)
T ss_dssp TTCCBCCCCHHHHHHHTSCTTCCEEESTTCEECCTTCCTTHHHHHHHHHHHHCCSSSEEEEEEEETTEEEEEEEECT---
T ss_pred CCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEECCEEEEEEEEHH---
T ss_conf 99799865999999998089964981476567885554331232277885249886499999999999988653024---
Q ss_pred CHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 02344202677683689999999999997199489999535324677843002799999998886237998899996167
Q gi|254780588|r 121 TKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEG 200 (317)
Q Consensus 121 ~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg 200 (317)
...+|++.+..-+|..|++++|.+.++|+|.|.|++||....+..-..|...+...+..++...+|+|++++|..
T Consensus 131 -----~f~GGS~g~~~geki~ra~e~A~~~~lP~I~~~~SGGaRmqeg~~sl~~~~~~~~a~~~~~~~gip~I~v~~~p~ 205 (285)
T 2f9i_B 131 -----RFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPT 205 (285)
T ss_dssp -----TTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEECSCCGGGHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred -----HCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf -----415781788898999999999985189769981587818476331045552999999999868997699983884
Q ss_pred CCCCCCCCCC-CCCEEEECCCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHH
Q ss_conf 7775421133-200022046740121554422442156012256554203884899978996526228898444898999
Q gi|254780588|r 201 GSGGAMGIAA-ANFVYMLEHAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQT 279 (317)
Q Consensus 201 ~sGGA~a~~~-~d~v~m~~~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~~~ 279 (317)
++|+++.+++ +|.+++-++|...+.+|.=-...+-. +.-+-. -||.-+.+.|.||.|++-
T Consensus 206 ~GG~~as~a~~~diii~e~~a~i~faGPrVi~~~~ge------~~pe~f-~~a~~~~~~G~iD~vv~r------------ 266 (285)
T 2f9i_B 206 TGGVSASFASVGDINLSEPKALIGFAGRRVIEQTINE------KLPDDF-QTAEFLLEHGQLDKVVHR------------ 266 (285)
T ss_dssp EHHHHTTGGGCCSEEEECTTCBEESSCHHHHHHHHTS------CCCTTT-TBHHHHHHTTCCSEECCG------------
T ss_pred CHHHHHHHHHCCCEEEEECCEEEEEECHHHHHHHHCC------CCCCCC-CCHHHHHHCCCCCEEECH------------
T ss_conf 5003212231774899857718998787578786189------898232-345889966786768767------------
Q ss_pred HHHHHHHHHHHHHHHHCCC
Q ss_conf 9999999999999985899
Q gi|254780588|r 280 ISSVGEIISQFLSETSTYS 298 (317)
Q Consensus 280 ~~~lk~~i~~~L~~L~~~~ 298 (317)
+.+++.|.+-|.-+...+
T Consensus 267 -~e~r~~l~~ll~~~~~~~ 284 (285)
T 2f9i_B 267 -NDMRQTLSEILKIHQEVT 284 (285)
T ss_dssp -GGHHHHHHHHHHHTCCSC
T ss_pred -HHHHHHHHHHHHHHHHCC
T ss_conf -999999999999665536
No 23
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, cytoplasm, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=99.70 E-value=1.1e-15 Score=130.94 Aligned_cols=180 Identities=14% Similarity=0.098 Sum_probs=138.1
Q ss_pred HHHHHHHCCCC---EEEECCCCCCCCC-CEEEEEEEEE------CCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHH
Q ss_conf 79998622545---0672275334789-7299998875------380089998458775023442026776836899999
Q gi|254780588|r 72 YIDYINSLFTH---FISLAGDRLFGDD-PAMQIGLARF------HGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAV 141 (317)
Q Consensus 72 ~~dyi~~l~~d---f~el~GDr~~~dD-~aii~G~a~i------~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~ 141 (317)
..++-+.++|+ ++|+ +|..|++ -+||+|++++ +|++|+|+++|-. ..+|+..|...+|..
T Consensus 61 ~~~~~el~~d~~~~l~~~--~r~~g~n~~g~V~~~~~~~tpe~p~GR~vvVianD~T--------~~gGS~G~~~~~ki~ 130 (758)
T 3k8x_A 61 FFISNELIEDENGELTEV--EREPGANAIGMVAFKITVKTPEYPRGRQFVVVANDIT--------FKIGSFGPQEDEFFN 130 (758)
T ss_dssp GEEEEEEEECTTSCEEEE--CCCTTCCSSSEEEEEEEECCSSCTTCEEEEEEEECTT--------SGGGCBCHHHHHHHH
T ss_pred EEEEEEEEECCCCCCCCC--CCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--------CCCCCCCHHHHHHHH
T ss_conf 125666665478871123--5578988612697798968986889968999988476--------206578889999999
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCC---------------------------------------------------
Q ss_conf 99999997199489999535324677843---------------------------------------------------
Q gi|254780588|r 142 RLMEMADRFKIPVISFIDTAGAYPGVDAE--------------------------------------------------- 170 (317)
Q Consensus 142 r~~~~A~~f~lPiv~lvDtpGa~~g~~aE--------------------------------------------------- 170 (317)
|..++|.+.++|+|+|+|+.||..|...|
T Consensus 131 ~a~elA~~~glP~I~l~~sgGARi~~~eev~~~~~va~~~~~~p~~G~~ylyl~~e~~~~l~~~~~~~~v~~~~~~~~Ge 210 (758)
T 3k8x_A 131 KVTEYARKRGIPRIYLAANSGARIGMAEEIVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGE 210 (758)
T ss_dssp HHHHHHHHHTCCEEEEECCCCBCCCCCGGGTTTCEEEESSTTCGGGCEEEEEECHHHHHHHHHTTCGGGEEEEEEEETTE
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCC
T ss_conf 99999998399989996588868643201023321134676673347552013667776664203456202210135776
Q ss_pred ------------------CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHH
Q ss_conf ------------------00279999999888623799889999616777754211332000220467401215544224
Q gi|254780588|r 171 ------------------ARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAAS 232 (317)
Q Consensus 171 ------------------~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~As 232 (317)
--..++.|+.....++. .+|+||+|+|.+.+||||.++++|+++|.+++-+-...|-.--.
T Consensus 211 ~~~~i~~iiG~~~~~GVe~L~g~G~I~~~~s~as~-~iP~Is~V~G~~~GggAy~~~l~D~vImv~~~~i~ltGp~av~k 289 (758)
T 3k8x_A 211 ERFVIKTIIGSEDGLGVECLRGSGLIAGATSRAYH-DIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINK 289 (758)
T ss_dssp EEEEEEEECCSSSCSSHHHHHHHHHHHHHHHHHHT-TSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEESSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCHHHHHHHCCCCEEEECCCEEEEECCHHHHH
T ss_conf 42000344465455552000455799999876612-57679997067652356532205602663685389978578888
Q ss_pred HHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 4215601225655420388489997899652622
Q gi|254780588|r 233 ILWRDSSRAAQAAIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 233 ILwkd~~~a~eAAealklTa~DL~~lGiID~II~ 266 (317)
.+-++....++-.- .+.-+.+.|++|-+.+
T Consensus 290 ~~G~ev~~~~~~~G----~~~~~~~nGv~d~~a~ 319 (758)
T 3k8x_A 290 MLGREVYTSNLQLG----GTQIMYNNGVSHLTAV 319 (758)
T ss_dssp HHTSCCCSCTHHHH----SHHHHTTTTSSSEEES
T ss_pred HHCCCCCCCCCCCC----HHHHHHCCCCEEEEEC
T ss_conf 74572556654542----5767634664058644
No 24
>3ff6_A Acetyl-COA carboxylase 2; ACC2, ACC, metabolic disorder, fatty acid metabolism, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis; HET: RCP; 3.19A {Homo sapiens}
Probab=99.67 E-value=6.6e-15 Score=125.27 Aligned_cols=195 Identities=19% Similarity=0.216 Sum_probs=143.7
Q ss_pred HHHH-HHHHHHHCCCC---EEEECCCCCCCC-CCEEEEEEEEE------CCCEEEEEEECCCCCCHHHHHHCCCCCCHHH
Q ss_conf 0223-79998622545---067227533478-97299998875------3800899984587750234420267768368
Q gi|254780588|r 68 NRPH-YIDYINSLFTH---FISLAGDRLFGD-DPAMQIGLARF------HGQPVAIIGQEKGSDTKSRIKHNFGSPRPEG 136 (317)
Q Consensus 68 ~Rp~-~~dyi~~l~~d---f~el~GDr~~~d-D~aii~G~a~i------~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g 136 (317)
..|. ..++.+.++|+ ++|. +|.-|. +-+||+|++++ +|++|+|+++|-. ...|...|..
T Consensus 46 ~~~~~~~~~~el~ld~~~~l~~~--~r~~g~n~~gmV~~~~~~~t~~~~~GR~vvvianD~T--------~~~GS~g~~~ 115 (760)
T 3ff6_A 46 KYPKDILTYTELVLDSQGQLVEM--NRLPGGNEVGMVAFKMRFKTQEYPEGRDVIVIGNDIT--------FRIGSFGPGE 115 (760)
T ss_dssp TCCSCSEEEEEEEECTTSCEEEE--CCCSSCCSSSEEEEEEEECCSSCTTCEEEEEEEECTT--------SGGGCBCHHH
T ss_pred CCCCCCEEEEEEEECCCCCEEEC--CCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCC--------EECCCCCHHH
T ss_conf 79875225678888599975654--5578888613596899867987869808999998476--------4054787899
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC----------------------------------------------
Q ss_conf 9999999999997199489999535324677843----------------------------------------------
Q gi|254780588|r 137 YRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAE---------------------------------------------- 170 (317)
Q Consensus 137 ~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE---------------------------------------------- 170 (317)
.+|..|..++|.+.++|+|+|+|+.||.+|.+.|
T Consensus 116 ~~k~~~a~elA~~~~lP~I~l~~ssGARi~~~e~~~~~~~va~~~~~~~~~G~~yly~t~~~~~~~~~~~~v~~~~~~~~ 195 (760)
T 3ff6_A 116 DLLYLRASEMARAEGIPKIYVAANSGARIGMAEEIKHMFHVAWVDPEDPHKGFKYLYLTPQDYTRISSLNSVHCKHIEEG 195 (760)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCCBCCCCCHHHHTTCEEEESCTTCTTSCEEEEEECHHHHHHHHTTTCEEEEEECGG
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCEEEEECCC
T ss_conf 99999999999984998899954788686432211112321345777744562122057788876541364201100247
Q ss_pred --------------------CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHH
Q ss_conf --------------------002799999998886237998899996167777542113320002204674012155442
Q gi|254780588|r 171 --------------------ARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGA 230 (317)
Q Consensus 171 --------------------~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~ 230 (317)
--+.+..|+... .++...+|+||+|+|.+.+|||+..+++|+++|.+++...+.+|..-
T Consensus 196 ge~~~~i~~iig~~~~~GVe~L~g~g~i~~~~-s~a~~~Iptis~V~G~~~GggAyl~~L~d~~I~~~~s~i~LtGp~vl 274 (760)
T 3ff6_A 196 GESRYMITDIIGKDDGLGVENLRGSGMIAGES-SLAYEEIVTISLVTCRAIGIGAYLVRLGQRVIQVENSHIILTGASAL 274 (760)
T ss_dssp GCCEEEEEEECCSSSSSSHHHHHHHHHHHHHH-HHHHHHSCEEEEESSCEETHHHHHHHHHCEEEEETTCBEESSCHHHH
T ss_pred CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHH-HHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCEEEEECCHHH
T ss_conf 76421002333665565500267779999999-97547898899971686515664321064378757835885184777
Q ss_pred HHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 2442156012256554203884899978996526228898444898999999999
Q gi|254780588|r 231 ASILWRDSSRAAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQTISSVGE 285 (317)
Q Consensus 231 AsILwkd~~~a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~~~~~~lk~ 285 (317)
-..+-+.....+ +.++ .+.-+...|++|.+.+ |-.+.+..++.
T Consensus 275 ~~~~G~ev~~s~---e~~G-g~~~~~~nGvad~~a~--------dd~eai~~ir~ 317 (760)
T 3ff6_A 275 NKVLGREVYTSN---NQLG-GVQIMHYNGVSHITVP--------DDFEGVYTILE 317 (760)
T ss_dssp HHHHSSCCCCCH---HHHH-BHHHHTTTTSSSEEES--------SHHHHHHHHHH
T ss_pred HHHCCCCCCCCC---HHCC-HHHHHCCCCCCCEEEC--------CHHHHHHHHHH
T ss_conf 653586304780---3217-0555334777660116--------88999999999
No 25
>3bpp_A 1510-N membrane protease; specific for A stomatin homolog, archaea, thermostable, catalytic DYAD, hydrolase; 2.30A {Pyrococcus horikoshii} PDB: 2deo_A
Probab=98.69 E-value=1.8e-07 Score=72.57 Aligned_cols=128 Identities=14% Similarity=0.177 Sum_probs=93.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE---CCCCCCC
Q ss_conf 6776836899999999999971994-89999535324677843002799999998886237998899996---1677775
Q gi|254780588|r 129 FGSPRPEGYRKAVRLMEMADRFKIP-VISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIII---GEGGSGG 204 (317)
Q Consensus 129 ~G~~~p~g~rKa~r~~~~A~~f~lP-iv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~---geg~sGG 204 (317)
.|+.+|..++...|.++.|+.-+.. ||-.|||||-.+ -++..|++. +..++.|++++|. |..+|||
T Consensus 16 ~G~I~~~~~~~i~~~l~~a~~~~~kaivL~IdSPGG~v-------~~~~~I~~~---i~~~~~~v~~~v~~~~~~AaS~g 85 (230)
T 3bpp_A 16 KGQITSYTYDQFDRYITIAEQDNAEAIIIELDTPGGRA-------DAMMNIVQR---IQQSKIPVIIYVYPPGASAASAG 85 (230)
T ss_dssp ESSBCHHHHHHHHHHHHHHHHTTCSEEEEEEEBSCBCH-------HHHHHHHHH---HHTCSSCEEEEECSTTCEEETHH
T ss_pred EEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCH-------HHHHHHHHH---HHHCCCCCCEEEEECCHHHHHHH
T ss_conf 76888699999999999997689986999985988189-------999999999---86046788579997344677778
Q ss_pred CCCCCCCCCEEEECCCCEEEECHHHHHHHHC-------------------------CCCHHHHH-HHHHCCCCHHHHHHC
Q ss_conf 4211332000220467401215544224421-------------------------56012256-554203884899978
Q gi|254780588|r 205 AMGIAAANFVYMLEHAIYSVISPEGAASILW-------------------------RDSSRAAQ-AAIAMKIIATDLQDL 258 (317)
Q Consensus 205 A~a~~~~d~v~m~~~s~ysvisPEg~AsILw-------------------------kd~~~a~e-AAealklTa~DL~~l 258 (317)
++....||+++|.++|....+.|=+...-.+ ++.+.+++ ..+..-+|+++.+++
T Consensus 86 ~~ia~a~d~i~~~p~s~iGs~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~v~~~~~~~~~eA~~~ 165 (230)
T 3bpp_A 86 TYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKY 165 (230)
T ss_dssp HHHHHTSSEEEECTTCEEECCCCEEECCSSSCCEECCHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCCEECHHHHHHT
T ss_pred HHHHHCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHC
T ss_conf 99885089899789981756454235788502677788889999999999999939499999988766878649999981
Q ss_pred CCCCEEEC
Q ss_conf 99652622
Q gi|254780588|r 259 SIIDGIIP 266 (317)
Q Consensus 259 GiID~II~ 266 (317)
|++|.|..
T Consensus 166 GlvD~i~~ 173 (230)
T 3bpp_A 166 GVIEVVAR 173 (230)
T ss_dssp TSCSEECS
T ss_pred CCCCEECC
T ss_conf 97300238
No 26
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=98.61 E-value=2.7e-06 Score=64.15 Aligned_cols=137 Identities=15% Similarity=0.203 Sum_probs=95.2
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCC---------C-HHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 77683689999999999997-199489999535324-677843---------0-02799999998886237998899996
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAE---------A-RGQGEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE---------~-~G~~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
...+++-++.....++.+++ -++-+|-|.-.++++ .|.+-. + ........+.+..+..+.+|+|++|-
T Consensus 46 Nal~~~~~~eL~~al~~~~~d~~i~vvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~PvIa~v~ 125 (263)
T 2j5g_A 46 LVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVN 125 (263)
T ss_dssp CEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHHHHHHHHHHHHHTCCSCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 88899999999999999975999859999788997528872313344455310146678999999999966997587618
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEE-------EECHHHHHHHHCCCC---HHHHHH-HHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 16777754211332000220467401-------215544224421560---122565-5420388489997899652622
Q gi|254780588|r 198 GEGGSGGAMGIAAANFVYMLEHAIYS-------VISPEGAASILWRDS---SRAAQA-AIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 198 geg~sGGA~a~~~~d~v~m~~~s~ys-------visPEg~AsILwkd~---~~a~eA-AealklTa~DL~~lGiID~II~ 266 (317)
|-..+||.++++ ||.+++.+++.|. -+.|.+.++.+|... .++.+. -..-.++|++++++|+||+|+|
T Consensus 126 G~a~GGg~lal~-cD~~ia~~~a~f~~~pe~~~G~~p~~g~~~~l~~~iG~~~a~~llltg~~i~a~eA~~~Glv~~vv~ 204 (263)
T 2j5g_A 126 GAALLHSEYILT-TDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLP 204 (263)
T ss_dssp SEECSCGGGGGG-CSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHTTCCEEHHHHHHTTSCSEEEC
T ss_pred CCEEEEEEECCC-CCEEEECCCCEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEC
T ss_conf 854788774255-6347864786687641111166767560778898846999976561398012999977799309878
Q ss_pred C
Q ss_conf 8
Q gi|254780588|r 267 E 267 (317)
Q Consensus 267 E 267 (317)
.
T Consensus 205 ~ 205 (263)
T 2j5g_A 205 Q 205 (263)
T ss_dssp G
T ss_pred H
T ss_conf 7
No 27
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=98.39 E-value=6.6e-06 Score=61.41 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCCCC-----------CHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 7683689999999999997199489999535324-677843-----------0027999999988862379988999961
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAY-PGVDAE-----------ARGQGEAIARATEMCLKLQVPILSIIIG 198 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~-~g~~aE-----------~~G~~~aia~~l~~~~~~~vP~i~vv~g 198 (317)
.++++-++-..+.++-++.-.+=+|-|.-.+.++ .|.+-. ..-....+.+.+..+..+.+|+|+.|-|
T Consensus 30 al~~~~~~el~~~l~~~~~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIaav~G 109 (267)
T 3hp0_A 30 TINDTLIEECLQVLNQCETSTVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASSQEPLYDLWMKLQTGPYVTISHVRG 109 (267)
T ss_dssp CBCSHHHHHHHHHHHHHHHSSCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCCCHHHHHHHHHHHHSSSEEEEEECS
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 99999999999999997469955999978998734799732252002210022232168999999997389888999656
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC--CHHHHHH-HHHCCCCHHHHHHCCCCCEEECCC
Q ss_conf 67777542113320002204674012------1554422442156--0122565-542038848999789965262288
Q gi|254780588|r 199 EGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD--SSRAAQA-AIAMKIIATDLQDLSIIDGIIPEP 268 (317)
Q Consensus 199 eg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd--~~~a~eA-AealklTa~DL~~lGiID~II~EP 268 (317)
...+||+--...||.+++.+++.|+. +.|-+..+.|.|- ..++.+. -..-.++|++++++|+||+|++++
T Consensus 110 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~r~iG~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~ 188 (267)
T 3hp0_A 110 KVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACVLPFLIRRIGRQKAHYMTLMTKPISVQEASEWGLIDAFDAES 188 (267)
T ss_dssp EEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTSSSCBCSCT
T ss_pred CEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHCCCCCEECCCH
T ss_conf 3231306877764766665401114741250678870243587772969999998628978899998889946766955
No 28
>2fbm_A Y chromosome chromodomain protein 1, telomeric isoform B; acetyltransferase, structural genomics, structural genomics consortium, SGC; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=98.38 E-value=1.1e-05 Score=59.74 Aligned_cols=138 Identities=17% Similarity=0.253 Sum_probs=97.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCCCCC--------H-----HHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 77683689999999999997199489999535324-6778430--------0-----27999999988862379988999
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAY-PGVDAEA--------R-----GQGEAIARATEMCLKLQVPILSI 195 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~-~g~~aE~--------~-----G~~~aia~~l~~~~~~~vP~i~v 195 (317)
...+++-++...+.++.++.-..-+|-|.-.++++ .|.+-.+ . -....+.+.+..+..+..|+|+.
T Consensus 46 Nal~~~~~~eL~~al~~~~~d~~~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAa 125 (291)
T 2fbm_A 46 NALNTEVIKEIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVS 125 (291)
T ss_dssp TCBCHHHHHHHHHHHHHHHHSSCSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 79899999999999999873998799997889956748875545322223210237999999999999998679989999
Q ss_pred EECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC---CHHHHHH-HHHCCCCHHHHHHCCCCCEEE
Q ss_conf 96167777542113320002204674012------1554422442156---0122565-542038848999789965262
Q gi|254780588|r 196 IIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD---SSRAAQA-AIAMKIIATDLQDLSIIDGII 265 (317)
Q Consensus 196 v~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd---~~~a~eA-AealklTa~DL~~lGiID~II 265 (317)
|-|-+.+||..-...||.+++.++++|+. +.|.++++.++.. ..++.+. -..-.++|.+++++|+||+|+
T Consensus 126 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gi~p~~~~~~~l~r~iG~~~a~~llltg~~~~a~eA~~~Glv~~vv 205 (291)
T 2fbm_A 126 VNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVF 205 (291)
T ss_dssp ECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTSCCEEEHHHHHHTTSCSEEE
T ss_pred ECCEECCCCCCEEECCCEECCCHHHHHHHHHCEECCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEE
T ss_conf 79910318873002356530144333231120006534654431004550456887999808724599999849930870
Q ss_pred CC
Q ss_conf 28
Q gi|254780588|r 266 PE 267 (317)
Q Consensus 266 ~E 267 (317)
|.
T Consensus 206 ~~ 207 (291)
T 2fbm_A 206 LT 207 (291)
T ss_dssp CS
T ss_pred CH
T ss_conf 82
No 29
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=98.35 E-value=8e-06 Score=60.82 Aligned_cols=137 Identities=18% Similarity=0.253 Sum_probs=96.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 77683689999999999997199489999535324-6778430-------------027999999988862379988999
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAY-PGVDAEA-------------RGQGEAIARATEMCLKLQVPILSI 195 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~-~g~~aE~-------------~G~~~aia~~l~~~~~~~vP~i~v 195 (317)
..++++-++-....++.++.-..-+|-+--.++++ .|.+-.+ ......+.+.+..+..+.+|+|+.
T Consensus 28 Nal~~~~~~el~~al~~~~~d~~~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaa 107 (261)
T 2gtr_A 28 NSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVA 107 (261)
T ss_dssp TEECHHHHHHHHHHHHHHHHSSCSCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 58899999999999999862997699997899864668887354221123320247899999988767875099989999
Q ss_pred EECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC---CHHHHH-HHHHCCCCHHHHHHCCCCCEEE
Q ss_conf 96167777542113320002204674012------1554422442156---012256-5542038848999789965262
Q gi|254780588|r 196 IIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD---SSRAAQ-AAIAMKIIATDLQDLSIIDGII 265 (317)
Q Consensus 196 v~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd---~~~a~e-AAealklTa~DL~~lGiID~II 265 (317)
|-|.+.+||+.-...||.++|.++++|+. +.|.++++-++.. ..++.+ +-..-.++|++++++|+||+|+
T Consensus 108 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~~G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv 187 (261)
T 2gtr_A 108 VNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVF 187 (261)
T ss_dssp ECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEE
T ss_pred ECCEEEECCCHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEE
T ss_conf 87814662117530001412335456553210147778843477899981952224542356767788997679736870
Q ss_pred C
Q ss_conf 2
Q gi|254780588|r 266 P 266 (317)
Q Consensus 266 ~ 266 (317)
|
T Consensus 188 ~ 188 (261)
T 2gtr_A 188 W 188 (261)
T ss_dssp C
T ss_pred C
T ss_conf 8
No 30
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, structural genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=98.32 E-value=5.9e-05 Score=54.69 Aligned_cols=138 Identities=15% Similarity=0.296 Sum_probs=94.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCCCCC-------------HHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 77683689999999999997199489999535324-6778430-------------027999999988862379988999
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAY-PGVDAEA-------------RGQGEAIARATEMCLKLQVPILSI 195 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~-~g~~aE~-------------~G~~~aia~~l~~~~~~~vP~i~v 195 (317)
..++++-.+.....++.+++-.--+|-+.-.++++ .|.+-.+ +.....+.+.+..+..+..|+|+.
T Consensus 48 Nals~~~~~el~~~l~~~~~d~~v~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaa 127 (280)
T 2f6q_A 48 NAINTEMYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAV 127 (280)
T ss_dssp TCBCHHHHHHHHHHHHHHHHSSCSEEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHHSCCSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 89899999999999998744999899996899877689867887413223320145778999999999999689988999
Q ss_pred EECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHC-C--CCHHHHHHH-HHCCCCHHHHHHCCCCCEEE
Q ss_conf 96167777542113320002204674012------15544224421-5--601225655-42038848999789965262
Q gi|254780588|r 196 IIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILW-R--DSSRAAQAA-IAMKIIATDLQDLSIIDGII 265 (317)
Q Consensus 196 v~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILw-k--d~~~a~eAA-ealklTa~DL~~lGiID~II 265 (317)
|-|...+||..-...||.+++.+++.|.. +.|.+.++..+ | -..++.+.. ..-.++|++++++|+||+|+
T Consensus 128 v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~g~~~~l~~~vG~~~a~~lll~g~~~~a~eA~~~Glv~~vv 207 (280)
T 2f6q_A 128 VNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVF 207 (280)
T ss_dssp ECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEE
T ss_pred ECCEEEECCCCCCCCCCCCCCCCCCEEECHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHCCCEEEEE
T ss_conf 76868755541003445322056858976143258584516689977761867779998727989899998779935880
Q ss_pred CC
Q ss_conf 28
Q gi|254780588|r 266 PE 267 (317)
Q Consensus 266 ~E 267 (317)
|.
T Consensus 208 ~~ 209 (280)
T 2f6q_A 208 PD 209 (280)
T ss_dssp CT
T ss_pred CH
T ss_conf 85
No 31
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=98.28 E-value=3.3e-05 Score=56.43 Aligned_cols=162 Identities=12% Similarity=0.057 Sum_probs=103.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECC-CCC-CCCCCC----------CHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 776836899999999999971-99489999535-324-677843----------00279999999888623799889999
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDTA-GAY-PGVDAE----------ARGQGEAIARATEMCLKLQVPILSII 196 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtp-Ga~-~g~~aE----------~~G~~~aia~~l~~~~~~~vP~i~vv 196 (317)
...+++-++.....++.++.- .+-+|-|.-.. .++ .|.+-. .......+.+.+..+.++.+|+|+.|
T Consensus 22 Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIaai 101 (250)
T 2a7k_A 22 NPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAV 101 (250)
T ss_dssp CBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 99999999999999999963999649999828999665887633333223305689999889999999996798748866
Q ss_pred ECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC--CCHHHHH-HHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 6167777542113320002204674012------155442244215--6012256-554203884899978996526228
Q gi|254780588|r 197 IGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR--DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 197 ~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk--d~~~a~e-AAealklTa~DL~~lGiID~II~E 267 (317)
-|...+||.--...||.+++.+++.|+. +.|.+.++.|.| ...++.+ .-..-.++|+++++.|+||+|+|.
T Consensus 102 ~G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~l~~~iG~~~a~~lll~g~~~~a~eA~~~Glv~~v~~~ 181 (250)
T 2a7k_A 102 DGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAAILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQVVES 181 (250)
T ss_dssp CSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHHHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTCCSEEECH
T ss_pred CCEEECCCCHHHHCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEECH
T ss_conf 76274264432322454523414277640355525576168789887339999999983990068999980997777684
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 8984448989999999999999999985899899999
Q gi|254780588|r 268 PIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIRE 304 (317)
Q Consensus 268 P~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~ 304 (317)
+.+.+...+....+.+.++..+..
T Consensus 182 -------------~~l~~~a~~~a~~la~~~~~a~~~ 205 (250)
T 2a7k_A 182 -------------SALLDAAITQAHVMASYPASAFIN 205 (250)
T ss_dssp -------------HHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred -------------HHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf -------------799999999999998589999999
No 32
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=98.26 E-value=2.2e-05 Score=57.71 Aligned_cols=135 Identities=11% Similarity=0.117 Sum_probs=91.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC-CCCCCC--------HHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 76836899999999999971994899995353246-778430--------027999999988862379988999961677
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYP-GVDAEA--------RGQGEAIARATEMCLKLQVPILSIIIGEGG 201 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~-g~~aE~--------~G~~~aia~~l~~~~~~~vP~i~vv~geg~ 201 (317)
..+++-.+-....++.++.-. -||-+-.+|+++. |.+-++ .-....+.+.+..+....+|+|+.|-|.+.
T Consensus 28 al~~~~~~~l~~~l~~~~~d~-~Vvi~s~~~~~Fs~G~dl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~p~Ia~v~G~~~ 106 (232)
T 3ot6_A 28 AISPDVIIAFNAALDQAEKDR-AIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGSTLARRMLSHPFPIIVACPGHAV 106 (232)
T ss_dssp CBCHHHHHHHHHHHHHHHHTT-CEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSCEEEECCEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCC-EEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEE
T ss_conf 899999999999999855498-2999977999676432243111111246677678999999997089977999806350
Q ss_pred CCCCCCCCCCCCEEEECCCC-E-------EEECHHHHHHHHCC--CCHHHHHH-HHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 77542113320002204674-0-------12155442244215--60122565-5420388489997899652622
Q gi|254780588|r 202 SGGAMGIAAANFVYMLEHAI-Y-------SVISPEGAASILWR--DSSRAAQA-AIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 202 sGGA~a~~~~d~v~m~~~s~-y-------svisPEg~AsILwk--d~~~a~eA-AealklTa~DL~~lGiID~II~ 266 (317)
+||..-...||.+++.+++. | .+..|-|.+..+.+ ...++.+. -..-.+||+++++.|+||+|++
T Consensus 107 GgG~~lal~~D~ria~~~~~~~~~pe~~~Gi~p~~~~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~ 182 (232)
T 3ot6_A 107 AKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAEMFDPEGAMAAGFLDKVVS 182 (232)
T ss_dssp THHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHHHTSCCEECHHHHHHHTSCSEEEC
T ss_pred CCCCHHHHHCCCHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEEC
T ss_conf 6621445514613453055433230015666567634457777727257778987089898999997799758708
No 33
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp}
Probab=98.23 E-value=3.6e-06 Score=63.30 Aligned_cols=129 Identities=16% Similarity=0.167 Sum_probs=83.6
Q ss_pred CCCCCHHHHHHHHHHHHHHH-H-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
Q ss_conf 67768368999999999999-7-199489999535324677843002799999998886237998899996167777542
Q gi|254780588|r 129 FGSPRPEGYRKAVRLMEMAD-R-FKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAM 206 (317)
Q Consensus 129 ~G~~~p~g~rKa~r~~~~A~-~-f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~ 206 (317)
+|..+++-.......+...+ + -.-||..++++||-.. .+.....-.|...+.|+.+++.|-..|.|++
T Consensus 36 ~g~I~~~~~~~~i~~l~~l~~~~~~~~I~l~INSpGG~v----------~~g~ai~d~i~~~~~~V~Tv~~G~aaS~a~l 105 (201)
T 3p2l_A 36 NGEVNDHSANLVIAQLLFLESEDPDKDIYFYINSPGGMV----------TAGMGVYDTMQFIKPDVSTICIGLAASMGSL 105 (201)
T ss_dssp ESCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCH----------HHHHHHHHHHHHSSSCEEEEEEEEEETHHHH
T ss_pred CCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH----------HHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
T ss_conf 986868999999999999873368898699981899878----------8999999999847999899994528767999
Q ss_pred CCCCC--CCEEEECCCCEEEECHH----HHHHHHCCCC-------------------HHHHHHHHHC----CCCHHHHHH
Q ss_conf 11332--00022046740121554----4224421560-------------------1225655420----388489997
Q gi|254780588|r 207 GIAAA--NFVYMLEHAIYSVISPE----GAASILWRDS-------------------SRAAQAAIAM----KIIATDLQD 257 (317)
Q Consensus 207 a~~~~--d~v~m~~~s~ysvisPE----g~AsILwkd~-------------------~~a~eAAeal----klTa~DL~~ 257 (317)
-++.+ +.-.|++||.+..=.|- |-++=++... ...++..+.+ -+||++.++
T Consensus 106 il~aG~k~~R~~~pns~iMiHq~~~~~~G~~~di~~~~~el~~~~~~i~~i~a~~tg~~~~~i~~~~~rd~~lta~EAle 185 (201)
T 3p2l_A 106 LLAGGAKGKRYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKA 185 (201)
T ss_dssp HHHTSSTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHHHH
T ss_pred HHHCCCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHH
T ss_conf 99679988687574704677156778885799999999999999999999999997959999998614784357999998
Q ss_pred CCCCCEEECC
Q ss_conf 8996526228
Q gi|254780588|r 258 LSIIDGIIPE 267 (317)
Q Consensus 258 lGiID~II~E 267 (317)
+|+||+||+.
T Consensus 186 yGliD~Ii~~ 195 (201)
T 3p2l_A 186 YGLIDHVIES 195 (201)
T ss_dssp HTSCSEECCC
T ss_pred CCCCCEEECC
T ss_conf 4998497055
No 34
>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=98.20 E-value=4.4e-05 Score=55.55 Aligned_cols=138 Identities=16% Similarity=0.112 Sum_probs=92.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEC-CCCC-CCCCCC-------------CHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 776836899999999999971-9948999953-5324-677843-------------00279999999888623799889
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDT-AGAY-PGVDAE-------------ARGQGEAIARATEMCLKLQVPIL 193 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDt-pGa~-~g~~aE-------------~~G~~~aia~~l~~~~~~~vP~i 193 (317)
...+++-++.....++.+++- .+-+|-|.=+ ++++ .|.+-. .+.....+.+.+..+..+..|+|
T Consensus 26 Nals~~~~~el~~~l~~~~~d~~v~~vVl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvI 105 (263)
T 3lke_A 26 NGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVTV 105 (263)
T ss_dssp TBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHTCSSEEE
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 89899999999999999850999579999638986416886210232001111157788889999999999983999899
Q ss_pred EEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHH-HHHCC--CCHHHHHHH-HHCCCCHHHHHHCCCCCE
Q ss_conf 9996167777542113320002204674012------1554422-44215--601225655-420388489997899652
Q gi|254780588|r 194 SIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAA-SILWR--DSSRAAQAA-IAMKIIATDLQDLSIIDG 263 (317)
Q Consensus 194 ~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~A-sILwk--d~~~a~eAA-ealklTa~DL~~lGiID~ 263 (317)
++|-|-+.+||..-...||.+++.++++|+. +.|.++. ..|-| ...++.+.. ..-+++|+++++.|+||+
T Consensus 106 aav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~G~~~~~g~~~~l~r~~G~~~a~~l~l~g~~~~a~eA~~~Glv~~ 185 (263)
T 3lke_A 106 ALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRLGLIQE 185 (263)
T ss_dssp EEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSE
T ss_pred EEECCCCCCCCHHHHHHCCEEEECCCCEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEE
T ss_conf 99768356065488740201022466614263114653778207899999976899999996599743314887797248
Q ss_pred EECC
Q ss_conf 6228
Q gi|254780588|r 264 IIPE 267 (317)
Q Consensus 264 II~E 267 (317)
|++.
T Consensus 186 vv~~ 189 (263)
T 3lke_A 186 ICEN 189 (263)
T ss_dssp EESS
T ss_pred EECC
T ss_conf 7399
No 35
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.19 E-value=8.9e-06 Score=60.51 Aligned_cols=132 Identities=14% Similarity=0.147 Sum_probs=84.8
Q ss_pred CCCCCHHHHHHHHH-HHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
Q ss_conf 67768368999999-99999971994899995353246778430027999999988862379988999961677775421
Q gi|254780588|r 129 FGSPRPEGYRKAVR-LMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMG 207 (317)
Q Consensus 129 ~G~~~p~g~rKa~r-~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a 207 (317)
+|..+++-....+. +.-+...-.-||.-+|++||-... .+-+| .-.|..++.|+.+|+.|-.+|-|++.
T Consensus 45 ~g~Id~~~a~~ii~~Ll~L~~~~~~~I~l~INS~GG~v~-------~g~aI---yd~i~~~~~~V~Tv~~G~aaS~as~I 114 (215)
T 2f6i_A 45 TDEINKKTADELISQLLYLDNINHNDIKIYINSPGGSIN-------EGLAI---LDIFNYIKSDIQTISFGLVASMASVI 114 (215)
T ss_dssp CSCBCHHHHHHHHHHHHHHHHHCCSCEEEEEEECCBCHH-------HHHHH---HHHHHHSSSCEEEEEEEEECHHHHHH
T ss_pred CCEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHH-------HHHHH---HHHHHHCCCCEEEEEECCCHHHHHHH
T ss_conf 981278999999999999755899785999989997688-------99999---99998669985999978850456888
Q ss_pred CCCCCC--EEEECCCCEEEECHHH----HHHHH---CC-------------------CCHHHHHHHH-HCCCCHHHHHHC
Q ss_conf 133200--0220467401215544----22442---15-------------------6012256554-203884899978
Q gi|254780588|r 208 IAAANF--VYMLEHAIYSVISPEG----AASIL---WR-------------------DSSRAAQAAI-AMKIIATDLQDL 258 (317)
Q Consensus 208 ~~~~d~--v~m~~~s~ysvisPEg----~AsIL---wk-------------------d~~~a~eAAe-alklTa~DL~~l 258 (317)
++.+++ ..|++||.+..=.|-+ -++=+ ++ +.++.++..+ -.-+||++.+++
T Consensus 115 l~aG~kg~R~~~pns~iMiHq~s~~~~G~~~di~~~~~el~~~~~~i~~~~a~~tg~~~e~I~~~~~~d~~lsa~EA~e~ 194 (215)
T 2f6i_A 115 LASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQY 194 (215)
T ss_dssp HHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEECHHHHHHH
T ss_pred HHCCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHC
T ss_conf 86078884683477569973687677887579999999999999999999998829999999987158815049999983
Q ss_pred CCCCEEECCCCC
Q ss_conf 996526228898
Q gi|254780588|r 259 SIIDGIIPEPIG 270 (317)
Q Consensus 259 GiID~II~EP~G 270 (317)
|+||+||+-...
T Consensus 195 GliD~Ii~~k~~ 206 (215)
T 2f6i_A 195 GIIDEVIETKLP 206 (215)
T ss_dssp TSCSEECCCSSC
T ss_pred CCCCEECCCCCC
T ss_conf 998698216999
No 36
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 1yg8_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A*
Probab=98.17 E-value=5.5e-06 Score=62.01 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=85.4
Q ss_pred HHHCCCCCCHHHHHHHHHH-HHHHHH-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 4202677683689999999-999997-19948999953532467784300279999999888623799889999616777
Q gi|254780588|r 125 IKHNFGSPRPEGYRKAVRL-MEMADR-FKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGS 202 (317)
Q Consensus 125 ~~~n~G~~~p~g~rKa~r~-~~~A~~-f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~s 202 (317)
+-.-+|..+++-....... ..+..+ -.-||-.++++||-.. .+...-.-.|-..++|+.+|+.|-..|
T Consensus 28 iifl~~~I~~~~~~~~i~~l~~l~~~~~~~~I~l~InSpGG~v----------~~gl~i~D~i~~~~~~V~Tv~~G~aaS 97 (193)
T 1yg6_A 28 VIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVI----------TAGMSIYDTMQFIKPDVSTICMGQAAS 97 (193)
T ss_dssp EEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCH----------HHHHHHHHHHHHSSSCEEEEEEEEEET
T ss_pred EEEECCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH----------HHHHHHHHHHHHCCCCEEEEEEHHHHH
T ss_conf 8988988646889999999999980499999799997899627----------579999999842799999998249998
Q ss_pred CCCCCCCCCC--CEEEECCCCEEEECHH----HHHHHHCCCCH-------------------HHHHHHHHCC----CCHH
Q ss_conf 7542113320--0022046740121554----42244215601-------------------2256554203----8848
Q gi|254780588|r 203 GGAMGIAAAN--FVYMLEHAIYSVISPE----GAASILWRDSS-------------------RAAQAAIAMK----IIAT 253 (317)
Q Consensus 203 GGA~a~~~~d--~v~m~~~s~ysvisPE----g~AsILwkd~~-------------------~a~eAAealk----lTa~ 253 (317)
-|++-++.++ +-+|++||.+..=.|- |-++=++...+ ..++..+.|+ +||+
T Consensus 98 ~a~lIl~~G~~g~R~~~pns~iMiHq~s~~~~G~~~di~~~~~el~~~~~~i~~i~a~~tg~~~~~i~~~~~rd~~l~a~ 177 (193)
T 1yg6_A 98 MGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAP 177 (193)
T ss_dssp HHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHH
T ss_pred HHHHHHHCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHH
T ss_conf 99999975999974576653776225664657549999999999999999999999999793999999872478337799
Q ss_pred HHHHCCCCCEEECC
Q ss_conf 99978996526228
Q gi|254780588|r 254 DLQDLSIIDGIIPE 267 (317)
Q Consensus 254 DL~~lGiID~II~E 267 (317)
+.+++|+||+||..
T Consensus 178 EAl~~GiiD~Ii~~ 191 (193)
T 1yg6_A 178 EAVEYGLVDSILTH 191 (193)
T ss_dssp HHHHHTSSSEECCC
T ss_pred HHHHCCCCCEEECC
T ss_conf 99980998589356
No 37
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative; 1.76A {Bordetella parapertussis}
Probab=98.14 E-value=6.1e-05 Score=54.57 Aligned_cols=159 Identities=13% Similarity=0.116 Sum_probs=101.6
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCCCCC---------HHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 7683689999999999997199489999535324-6778430---------02799999998886237998899996167
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAY-PGVDAEA---------RGQGEAIARATEMCLKLQVPILSIIIGEG 200 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~-~g~~aE~---------~G~~~aia~~l~~~~~~~vP~i~vv~geg 200 (317)
.++++-++-....++.++.-.+-+|-|--.+.+| .|.+-.+ .-....+.+.+..+.++.+|+|+.|-|..
T Consensus 30 al~~~m~~el~~al~~~~~~~v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav~G~a 109 (254)
T 3isa_A 30 ALSAELVEALIDGVDAAHREQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRN 109 (254)
T ss_dssp CBCHHHHHHHHHHHHHHHHTTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCE
T ss_conf 99999999999999997579954999978899711698704310110012456678999999999858998999679718
Q ss_pred CCCCCCCCCCCCCEEEECCCCEEEECHHHH------HHHHCC--CCHHHHHHH-HHCCCCHHHHHHCCCCCEEECCCCCC
Q ss_conf 777542113320002204674012155442------244215--601225655-42038848999789965262288984
Q gi|254780588|r 201 GSGGAMGIAAANFVYMLEHAIYSVISPEGA------ASILWR--DSSRAAQAA-IAMKIIATDLQDLSIIDGIIPEPIGG 271 (317)
Q Consensus 201 ~sGGA~a~~~~d~v~m~~~s~ysvisPEg~------AsILwk--d~~~a~eAA-ealklTa~DL~~lGiID~II~EP~GG 271 (317)
.+||+--...||.+++.+++.|+. ||.- +..|.+ ...++.+.. ..-.++|+++++.|+||+|++..
T Consensus 110 ~GgG~~lal~~D~ria~~~a~f~~--pe~~~Gl~pg~~~l~r~iG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~--- 184 (254)
T 3isa_A 110 FGAGVDLFAACKWRYCTPEAGFRM--PGLKFGLVLGTRRFRDIVGADQALSILGSARAFDADEARRIGFVRDCAAQA--- 184 (254)
T ss_dssp ETHHHHHHHHSSEEEECTTCEEEC--CGGGGTCCCSHHHHHHHHCHHHHHHHHTTTCEEEHHHHHHTTSSSEECCGG---
T ss_pred EECCCCCCCCCCEEEECCCCCCCC--CCEEEEECCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHCCCHHEECCHH---
T ss_conf 764762355577689765435557--510250057765434441699999998606776778999769731562887---
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 448989999999999999999985899899999
Q gi|254780588|r 272 AHRNPAQTISSVGEIISQFLSETSTYSETEIRE 304 (317)
Q Consensus 272 AHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~ 304 (317)
.+...+......+...++..+..
T Consensus 185 ----------~l~~~~~~~a~~l~~~~p~a~~~ 207 (254)
T 3isa_A 185 ----------QWPALIDAAAEAATALDPATRAT 207 (254)
T ss_dssp ----------GHHHHHHHHHHHHTTSCHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHCCCHHHHHH
T ss_conf ----------99999999999998399999999
No 38
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on protein structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=98.13 E-value=4.7e-05 Score=55.38 Aligned_cols=138 Identities=17% Similarity=0.249 Sum_probs=94.9
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCC--------CHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 77683689999999999997-199489999535324-677843--------00279999999888623799889999616
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAE--------ARGQGEAIARATEMCLKLQVPILSIIIGE 199 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE--------~~G~~~aia~~l~~~~~~~vP~i~vv~ge 199 (317)
..++++-.+-..+.++.+++ -.+-+|.+--.++++ .|.+-. .......+.+.+..+..+.+|+|+.|-|-
T Consensus 25 Nal~~~~~~~l~~~l~~~~~d~~v~vvvl~g~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~l~~~~kP~Iaav~G~ 104 (257)
T 2ej5_A 25 NAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVNGA 104 (257)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTHHHHHHHHHHCCSCEEEEECSE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCE
T ss_conf 89999999999999999964989089999789988657776798642000135677666789998753699599997884
Q ss_pred CCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHH-HHCC--CCHHHHHHH-HHCCCCHHHHHHCCCCCEEECC
Q ss_conf 7777542113320002204674012------15544224-4215--601225655-4203884899978996526228
Q gi|254780588|r 200 GGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAAS-ILWR--DSSRAAQAA-IAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 200 g~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~As-ILwk--d~~~a~eAA-ealklTa~DL~~lGiID~II~E 267 (317)
+.+||..-...||.+++.+++.|+. +.|.+.++ .|-+ ...++.+.. ..-.++|.++++.|+||+|++.
T Consensus 105 a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~ 182 (257)
T 2ej5_A 105 AAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAAALGLATKVIPL 182 (257)
T ss_dssp EETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTCCSEEECG
T ss_pred EEHHHHHHHHHCCEEEECCCCEEECHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECH
T ss_conf 646889999850689836887898343261868860399999999574026678641798988899878963897287
No 39
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=98.12 E-value=0.00014 Score=52.08 Aligned_cols=138 Identities=14% Similarity=0.215 Sum_probs=94.1
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCC--------CHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 77683689999999999997-199489999535324-677843--------00279999999888623799889999616
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAE--------ARGQGEAIARATEMCLKLQVPILSIIIGE 199 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE--------~~G~~~aia~~l~~~~~~~vP~i~vv~ge 199 (317)
..++++=.+-....++.+++ -.+-+|-+--.++.+ .|.+-. ...........+..+..+..|+|+.|-|-
T Consensus 22 Nals~~~~~~l~~al~~~~~d~~v~~vvl~~~g~~f~~g~dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa~v~G~ 101 (254)
T 3gow_A 22 NAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGV 101 (254)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECSE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCE
T ss_conf 89999999999999999976889389999678987565630565214523578999999999999971999899998784
Q ss_pred CCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHH-HHCC--CCHHHHH-HHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 7777542113320002204674012------15544224-4215--6012256-554203884899978996526228
Q gi|254780588|r 200 GGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAAS-ILWR--DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 200 g~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~As-ILwk--d~~~a~e-AAealklTa~DL~~lGiID~II~E 267 (317)
+.+||..-...||.++|.+++.|+. +.|.++.+ +|.+ ...++.+ .-..-.++++++++.|+||+|++.
T Consensus 102 a~GgG~~la~~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~~~ltg~~~~a~eA~~~Glv~~vv~~ 179 (254)
T 3gow_A 102 AAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVPA 179 (254)
T ss_dssp EETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred EEHHHHHHHHCCCEEEECCCCEEECHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCEECHHHHHHCCCEEEEECC
T ss_conf 212548877525515873887898611075768752499999998676679999863953259999987997998273
No 40
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=98.12 E-value=0.00011 Score=52.62 Aligned_cols=160 Identities=13% Similarity=0.124 Sum_probs=94.5
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCCC-CCCC---------CCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 7683689999999999997-1994899995353246-7784---------300279999999888623799889999616
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAYP-GVDA---------EARGQGEAIARATEMCLKLQVPILSIIIGE 199 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~~-g~~a---------E~~G~~~aia~~l~~~~~~~vP~i~vv~ge 199 (317)
..+++-++-....++.++. -.+-+|-|--.+++|. |.+- +..-......+.+..+.....|+|++|-|-
T Consensus 39 al~~~~~~el~~~l~~~~~d~~v~~vvltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIa~v~g~ 118 (257)
T 1szo_A 39 VWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGP 118 (257)
T ss_dssp EECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 99999999999999999749995499996688762157644332344411477889999999999870897189997135
Q ss_pred CCCCCCCCCCCCCCEEEECCCCEEE-------ECHHHHHHHHCC---CCHHHHHHH-HHCCCCHHHHHHCCCCCEEECCC
Q ss_conf 7777542113320002204674012-------155442244215---601225655-42038848999789965262288
Q gi|254780588|r 200 GGSGGAMGIAAANFVYMLEHAIYSV-------ISPEGAASILWR---DSSRAAQAA-IAMKIIATDLQDLSIIDGIIPEP 268 (317)
Q Consensus 200 g~sGGA~a~~~~d~v~m~~~s~ysv-------isPEg~AsILwk---d~~~a~eAA-ealklTa~DL~~lGiID~II~EP 268 (317)
.++|+.+++ .||.+++.+++.|.. +.|.+.++-+|. ...++.+.. ..-.++++++++.|+||+|++.
T Consensus 119 ~~GG~~lal-~~D~ria~~~a~f~~~pe~~~g~~p~~g~~~~l~r~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~- 196 (257)
T 1szo_A 119 VTNAPEIPV-MSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLSE- 196 (257)
T ss_dssp BCSSTHHHH-TSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHHHHHHHTSCSEEECH-
T ss_pred CCEEEEEEC-CCCEEEECCCCEEECCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEECH-
T ss_conf 550577505-776489858886753773244647765421110776089999989863981639999856998877676-
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 984448989999999999999999985899899999
Q gi|254780588|r 269 IGGAHRNPAQTISSVGEIISQFLSETSTYSETEIRE 304 (317)
Q Consensus 269 ~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~ 304 (317)
+.+.....+-...+.+.++..+..
T Consensus 197 ------------~~l~~~a~~~a~~l~~~~~~a~~~ 220 (257)
T 1szo_A 197 ------------QELLPRAWELARGIAEKPLLARRY 220 (257)
T ss_dssp ------------HHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred ------------HHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf ------------899999999999998489999999
No 41
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium 104}
Probab=98.10 E-value=0.00018 Score=51.18 Aligned_cols=152 Identities=14% Similarity=0.182 Sum_probs=100.0
Q ss_pred CEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCCC----------HH--
Q ss_conf 0089998458775023442026776836899999999999971-99489999535324-6778430----------02--
Q gi|254780588|r 108 QPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAEA----------RG-- 173 (317)
Q Consensus 108 ~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE~----------~G-- 173 (317)
-+|++|-=+ |+.+ -..++++-++-....++.+++- .+-+|-+--++.++ .|.+-.+ ..
T Consensus 19 G~Va~itln-------rP~~-~Nal~~~~~~~l~~~l~~~~~d~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 90 (267)
T 3oc7_A 19 GPVARLTLN-------SPHN-RNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMA 90 (267)
T ss_dssp SSEEEEEEC-------CGGG-TSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHH
T ss_pred CCEEEEEEC-------CCCC-CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCHHHHHH
T ss_conf 878999973-------8886-79989999999999999996599955999978899774898779875324430246778
Q ss_pred --HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC---CHHHH
Q ss_conf --799999998886237998899996167777542113320002204674012------1554422442156---01225
Q gi|254780588|r 174 --QGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD---SSRAA 242 (317)
Q Consensus 174 --~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd---~~~a~ 242 (317)
......+.+..+..+.+|+|+.|-|...+||+.-...||.+++.+++.|+. +.|.+.++.++.- ...++
T Consensus 91 ~~~~~~~~~~~~~l~~~~kPvIa~v~G~a~GgG~~la~~~D~ria~~~a~f~~~~~~~Gl~p~~g~~~~~~~~~~~~~~~ 170 (267)
T 3oc7_A 91 VERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLPKLSARAAAR 170 (267)
T ss_dssp HHHHHHHHHHHHHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECEECCCCHHHHHHCCCCEECCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999977998899982766115337765123011177543112530207787301889999988999999
Q ss_pred HHHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 6554203884899978996526228
Q gi|254780588|r 243 QAAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 243 eAAealklTa~DL~~lGiID~II~E 267 (317)
-.-..-.++++++++.|+||++.+|
T Consensus 171 llltg~~~~a~eA~~~Glv~~v~e~ 195 (267)
T 3oc7_A 171 YYLTGEKFDARRAEEIGLITMAAED 195 (267)
T ss_dssp HHHHCCCBCHHHHHHHTSSSEECSS
T ss_pred HHHCCCCCCHHHHHHCCCEEEECHH
T ss_conf 9985897787999988985887604
No 42
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=98.10 E-value=6e-05 Score=54.62 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=93.1
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCC---------------CC-----HHHHHHHHHHHHHHHCC
Q ss_conf 76836899999999999971-99489999535324-67784---------------30-----02799999998886237
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDA---------------EA-----RGQGEAIARATEMCLKL 188 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~a---------------E~-----~G~~~aia~~l~~~~~~ 188 (317)
.++++-+.-....++.+++- .+=+|-+--++.+| .|.+- ++ ..........+..+...
T Consensus 32 al~~~~~~~l~~al~~~~~d~~v~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (280)
T 1pjh_A 32 ALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAFIKH 111 (280)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 98999999999999999749997699996699874388726888722345421110134789999999999999999968
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCEEEECCCC-EEE------ECHHHHHHHHCCC---CHHHHHHH-HHCCCCHHHHHH
Q ss_conf 998899996167777542113320002204674-012------1554422442156---01225655-420388489997
Q gi|254780588|r 189 QVPILSIIIGEGGSGGAMGIAAANFVYMLEHAI-YSV------ISPEGAASILWRD---SSRAAQAA-IAMKIIATDLQD 257 (317)
Q Consensus 189 ~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~-ysv------isPEg~AsILwkd---~~~a~eAA-ealklTa~DL~~ 257 (317)
..|+|+.|-|.+.+||..-...||.+++.+++. ++. +.|.++++..|.. ..++.+.. ..-.++|+++++
T Consensus 112 ~kPvIaav~G~a~GgG~~lal~~D~ria~~d~~~~~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~llltg~~~~a~eA~~ 191 (280)
T 1pjh_A 112 SKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCE 191 (280)
T ss_dssp CSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHTTCCEEHHHHHH
T ss_pred CCCEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99989997781014664233221057764442342362016783887323211477735999999998399577999998
Q ss_pred CCCCCEEECCCCC
Q ss_conf 8996526228898
Q gi|254780588|r 258 LSIIDGIIPEPIG 270 (317)
Q Consensus 258 lGiID~II~EP~G 270 (317)
+|+||+|++.|..
T Consensus 192 ~Glv~~vv~~~~~ 204 (280)
T 1pjh_A 192 NGFISKNFNMPSS 204 (280)
T ss_dssp TTCCSEECCCCTT
T ss_pred CCCEEEEECCCHH
T ss_conf 7994487487124
No 43
>1tg6_A Putative ATP-dependent CLP protease proteolytic subunit; mitochondrial CLPP, CLP/HSP 100, X-RAY crystallography, ATP- dependent protease; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.10 E-value=1.6e-05 Score=58.76 Aligned_cols=141 Identities=19% Similarity=0.250 Sum_probs=90.7
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHH-HH-HHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 34420267768368999999999-99-97199489999535324677843002799999998886237998899996167
Q gi|254780588|r 123 SRIKHNFGSPRPEGYRKAVRLME-MA-DRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEG 200 (317)
Q Consensus 123 ~~~~~n~G~~~p~g~rKa~r~~~-~A-~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg 200 (317)
+|+-.-+|..+.+-....+.-+- |. +.-.-||-.+|++||-.. -.+-+|- -+|-..+.|+.++++|..
T Consensus 82 ~RIIfl~g~Idd~~a~~iiaqLl~Le~ed~~k~I~lyINSpGGsv-------~~GlaIy---D~m~~i~~~V~Tv~~G~A 151 (277)
T 1tg6_A 82 ERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVV-------TAGLAIY---DTMQYILNPICTWCVGQA 151 (277)
T ss_dssp TTEEEEESSBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCH-------HHHHHHH---HHHHHSCSCEEEEEEEEE
T ss_pred CCEEEECCEECHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHH-------HHHHHHH---HHHHHCCCCCEEEEEEEE
T ss_conf 688998987758999999999999866599987899997999568-------7899999---999854888569986322
Q ss_pred CCCCCCCCCCCCC--EEEECCCCEEEECHHHHH----HHHCCC-------------------CHHHHHHHHHCC----CC
Q ss_conf 7775421133200--022046740121554422----442156-------------------012256554203----88
Q gi|254780588|r 201 GSGGAMGIAAANF--VYMLEHAIYSVISPEGAA----SILWRD-------------------SSRAAQAAIAMK----II 251 (317)
Q Consensus 201 ~sGGA~a~~~~d~--v~m~~~s~ysvisPEg~A----sILwkd-------------------~~~a~eAAealk----lT 251 (317)
+|=|++-++.++. -.|++||.+.+=.|.+.+ +=+... ....++..+.|. +|
T Consensus 152 aSmaslIlaaG~kgkR~a~pns~iMIHqp~~~~~G~a~di~~~a~el~~~~~~l~~iya~~TG~~~e~I~~~m~rD~~ms 231 (277)
T 1tg6_A 152 ASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMS 231 (277)
T ss_dssp ETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEEC
T ss_pred CCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
T ss_conf 30567898726777103389987887258657775899999999999999999999999987939999998750684065
Q ss_pred HHHHHHCCCCCEEECCCCCCCC
Q ss_conf 4899978996526228898444
Q gi|254780588|r 252 ATDLQDLSIIDGIIPEPIGGAH 273 (317)
Q Consensus 252 a~DL~~lGiID~II~EP~GGAH 273 (317)
|++.+++|+||+||..+.-.+.
T Consensus 232 a~EA~eyGliD~Ii~~~~~~~~ 253 (277)
T 1tg6_A 232 PMEAQEFGILDKVLVHPPQDGE 253 (277)
T ss_dssp HHHHHHHTSCSEECSSCC----
T ss_pred HHHHHHCCCCCEEECCCCCCCC
T ss_conf 9999983998789337876676
No 44
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopeptidase, ATP-dependent protease, hydrolase; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.08 E-value=1.4e-05 Score=59.04 Aligned_cols=130 Identities=18% Similarity=0.178 Sum_probs=86.0
Q ss_pred CCCCCCHHHHHHHHHHHH-H-HHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 267768368999999999-9-99719948999953532467784300279999999888623799889999616777754
Q gi|254780588|r 128 NFGSPRPEGYRKAVRLME-M-ADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGA 205 (317)
Q Consensus 128 n~G~~~p~g~rKa~r~~~-~-A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA 205 (317)
-+|..+++-..+.+..+- + .+.-.-||-.++++||-.+- .+-+| .-.|-..+.|+.+++.|..+|-|+
T Consensus 32 l~~~Id~~~a~~ii~~L~~L~~~~~~k~I~l~InS~GG~v~-------~glaI---~d~i~~~~~~V~ti~~G~aaS~as 101 (208)
T 2cby_A 32 LGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSIS-------AGMAI---YDTMVLAPCDIATYAMGMAASMGE 101 (208)
T ss_dssp ECSCBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHH-------HHHHH---HHHHHHCSSCEEEEEEEEEETHHH
T ss_pred ECCEECHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH-------HHHHH---HHHHHHCCCCEEEEECCCCCCHHH
T ss_conf 89836789999999999997451889980788679988787-------89999---999986599879996363543899
Q ss_pred CCCCCCC--CEEEECCCCEEEECHH----HHHHHHCCCC-------------------HHHHHHHHHC----CCCHHHHH
Q ss_conf 2113320--0022046740121554----4224421560-------------------1225655420----38848999
Q gi|254780588|r 206 MGIAAAN--FVYMLEHAIYSVISPE----GAASILWRDS-------------------SRAAQAAIAM----KIIATDLQ 256 (317)
Q Consensus 206 ~a~~~~d--~v~m~~~s~ysvisPE----g~AsILwkd~-------------------~~a~eAAeal----klTa~DL~ 256 (317)
+-++.++ .-+|++||.+..=.|. |.++=+...+ ...++..+.| -+||++.+
T Consensus 102 lIl~aG~kg~R~~~pns~iMiHq~~~~~~G~~~di~~~a~el~~~~~~i~~iya~~Tg~~~e~I~~~~~rd~~lsa~EAl 181 (208)
T 2cby_A 102 FLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEAL 181 (208)
T ss_dssp HHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEEHHHHH
T ss_pred HHHHCCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
T ss_conf 99867898956887986278888873667777689999999999999999999999795999999860688434599999
Q ss_pred HCCCCCEEECC
Q ss_conf 78996526228
Q gi|254780588|r 257 DLSIIDGIIPE 267 (317)
Q Consensus 257 ~lGiID~II~E 267 (317)
++|+||+||..
T Consensus 182 ~yGliD~Ii~~ 192 (208)
T 2cby_A 182 EYGFVDHIITR 192 (208)
T ss_dssp HHTSCSEECSC
T ss_pred HCCCCCEEECC
T ss_conf 84998798357
No 45
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=98.07 E-value=4.5e-05 Score=55.51 Aligned_cols=165 Identities=16% Similarity=0.192 Sum_probs=97.7
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCC-CC-CCCCCCCHH------------HHHHHHHHHHHHHCCC
Q ss_conf 42026776836899999999999971-994899995353-24-677843002------------7999999988862379
Q gi|254780588|r 125 IKHNFGSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAG-AY-PGVDAEARG------------QGEAIARATEMCLKLQ 189 (317)
Q Consensus 125 ~~~n~G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpG-a~-~g~~aE~~G------------~~~aia~~l~~~~~~~ 189 (317)
+.+| .++++-++...+.++.++.- .+-+|-|.-..| ++ .|.+-.+-. ....+.+.+..+.++.
T Consensus 26 p~~N--al~~~m~~eL~~al~~~~~d~~v~vvVl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 103 (289)
T 3h0u_A 26 PPMN--LIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQLP 103 (289)
T ss_dssp TTTC--CBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCSHHHHHHHHHTCS
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9868--89999999999999998539895699992789980114015454443201013433456789999999999689
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCEEEE-CCCCEEE------ECHHHHHHHHCC---CCHHHHH-HHHHCCCCHHHHHHC
Q ss_conf 9889999616777754211332000220-4674012------155442244215---6012256-554203884899978
Q gi|254780588|r 190 VPILSIIIGEGGSGGAMGIAAANFVYML-EHAIYSV------ISPEGAASILWR---DSSRAAQ-AAIAMKIIATDLQDL 258 (317)
Q Consensus 190 vP~i~vv~geg~sGGA~a~~~~d~v~m~-~~s~ysv------isPEg~AsILwk---d~~~a~e-AAealklTa~DL~~l 258 (317)
+|+|+.|-|...+||..-...||.+++. ++++|+. +.|.+.++.++. ...++.+ .-..-+++|+++++.
T Consensus 104 kPvIaav~G~a~GgG~~lal~cD~~iaa~e~a~f~~pe~~~Gl~p~~g~~~~l~r~iG~~~a~~llltg~~~~a~eA~~~ 183 (289)
T 3h0u_A 104 AVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSDFDADLAERY 183 (289)
T ss_dssp SEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHH
T ss_pred CCEEEECCCCCCCCHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
T ss_conf 98998059952463037877177135635886153664465258886425777765109999999983994769999987
Q ss_pred CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 9965262288984448989999999999999999985899899999
Q gi|254780588|r 259 SIIDGIIPEPIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIRE 304 (317)
Q Consensus 259 GiID~II~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~ 304 (317)
|+||+|+|. +.+.+...+....+.+.++..+..
T Consensus 184 Glv~~vv~~-------------~~l~~~a~~~a~~la~~~~~a~~~ 216 (289)
T 3h0u_A 184 GWVNRAVPD-------------AELDEFVAGIAARMSGFPRDALIA 216 (289)
T ss_dssp TSSSEEECH-------------HHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCCCEEECH-------------HHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 997187188-------------799999999999998679999999
No 46
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=98.06 E-value=7e-05 Score=54.13 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=93.4
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC---CCCCCCC--------CCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 76836899999999999971994899995353---2467784--------300279999999888623799889999616
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRFKIPVISFIDTAG---AYPGVDA--------EARGQGEAIARATEMCLKLQVPILSIIIGE 199 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpG---a~~g~~a--------E~~G~~~aia~~l~~~~~~~vP~i~vv~ge 199 (317)
..+++-.+-..+.++.++.-..-+|-|..+.| |-.|.+- +.......+.+.+..+.++.+|+|+.|-|-
T Consensus 27 al~~~~~~~L~~al~~~~~~~~~~vVl~g~~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~ 106 (261)
T 1ef8_A 27 ALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGS 106 (261)
T ss_dssp CCCHHHHHHHHHHHHHTCSTTCCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEECSE
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCE
T ss_conf 99999999999999997379987999971489974766877113434674302466999999999997799889997748
Q ss_pred CCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHHHHH-HCCCCHHHHHHCCCCCEEECC
Q ss_conf 7777542113320002204674012------155442244215---6012256554-203884899978996526228
Q gi|254780588|r 200 GGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQAAI-AMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 200 g~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~eAAe-alklTa~DL~~lGiID~II~E 267 (317)
..+||..-...||.+++.+++.|.. +.|.+.++.++. ...++.+..= .-.++|++++++|+||+|+++
T Consensus 107 a~GgG~~lala~D~ria~~~a~f~~pe~~~G~~~~~g~~~~l~~~~G~~~a~~~~l~g~~~~a~eA~~~Glv~~v~~~ 184 (261)
T 1ef8_A 107 VWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEV 184 (261)
T ss_dssp EETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECH
T ss_pred EEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCEECHHHHHHCCCCCEECCC
T ss_conf 864010244534440000001235840001235564203244677173678999980984459999975992275680
No 47
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=98.05 E-value=2.2e-05 Score=57.78 Aligned_cols=136 Identities=15% Similarity=0.176 Sum_probs=88.5
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHH-H-HHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 344202677683689999999999-9-97199489999535324677843002799999998886237998899996167
Q gi|254780588|r 123 SRIKHNFGSPRPEGYRKAVRLMEM-A-DRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEG 200 (317)
Q Consensus 123 ~~~~~n~G~~~p~g~rKa~r~~~~-A-~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg 200 (317)
+|+-.-+|..+.+-..+....+-. . +.-.-||..+|++||-.. .+.....-.|-.++.|+.+++.|-.
T Consensus 45 ~RiIfL~g~Id~~~a~~iia~Ll~l~~~d~~k~I~l~INS~GG~v----------~~glaI~D~m~~~~~~V~Ti~~G~A 114 (218)
T 1y7o_A 45 DRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSV----------SAGLAIVDTMNFIKADVQTIVMGMA 114 (218)
T ss_dssp TTEEEEESCBCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCH----------HHHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred CCEEEECCEECHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCH----------HHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 688998989868999999999998885199987899982897868----------7899999999856998799996255
Q ss_pred CCCCCCCCCCC--CCEEEECCCCEEEECHHH----HHH--HHCCCCHHH-------------------HHHHH----HCC
Q ss_conf 77754211332--000220467401215544----224--421560122-------------------56554----203
Q gi|254780588|r 201 GSGGAMGIAAA--NFVYMLEHAIYSVISPEG----AAS--ILWRDSSRA-------------------AQAAI----AMK 249 (317)
Q Consensus 201 ~sGGA~a~~~~--d~v~m~~~s~ysvisPEg----~As--ILwkd~~~a-------------------~eAAe----alk 249 (317)
+|-|++-++.+ ++.+|++||.+..-.|-+ -+. -.+...... ++..+ -.-
T Consensus 115 aS~aslIl~aG~kg~R~~~pns~iMiHqp~~~~~G~~~~~~~~~~~~el~~~~~~i~~i~a~~Tg~~~~~I~~~~~rd~~ 194 (218)
T 1y7o_A 115 ASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDNW 194 (218)
T ss_dssp ETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCCC
T ss_pred CCHHHHHHHCCCCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEE
T ss_conf 44356898716888468745588883788556555531779999999999999999999998879799999986217906
Q ss_pred CCHHHHHHCCCCCEEECCC
Q ss_conf 8848999789965262288
Q gi|254780588|r 250 IIATDLQDLSIIDGIIPEP 268 (317)
Q Consensus 250 lTa~DL~~lGiID~II~EP 268 (317)
+||++.++.|+||+||.+.
T Consensus 195 lsa~EAleyGliD~Ii~~~ 213 (218)
T 1y7o_A 195 MSAQETLEYGFIDEIMANN 213 (218)
T ss_dssp BCHHHHHHHTSCSEECCCC
T ss_pred ECHHHHHHCCCCCEECCCC
T ss_conf 5399999859986982468
No 48
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=98.03 E-value=0.00023 Score=50.51 Aligned_cols=138 Identities=17% Similarity=0.197 Sum_probs=92.6
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCC------------CHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 76836899999999999971-99489999535324-677843------------00279999999888623799889999
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAE------------ARGQGEAIARATEMCLKLQVPILSII 196 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE------------~~G~~~aia~~l~~~~~~~vP~i~vv 196 (317)
..+++-++-..+.++.+++- ++-+|-+--+++.+ .|.+-. .......+.+.+..+..+..|+|++|
T Consensus 22 al~~~~~~el~~~l~~~~~d~~v~~vvi~g~g~~f~~g~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaai 101 (253)
T 1uiy_A 22 PLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAV 101 (253)
T ss_dssp CCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 98999999999999999739996599997888664456406766412345530122321236689999996899889999
Q ss_pred ECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC--CCHHHHHH-HHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 6167777542113320002204674012------155442244215--60122565-54203884899978996526228
Q gi|254780588|r 197 IGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR--DSSRAAQA-AIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 197 ~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk--d~~~a~eA-AealklTa~DL~~lGiID~II~E 267 (317)
-|-..+||..-...||.+++.+++.|+. +.|.+..+.|-+ ...++.+. -..-.++|+++++.|+||+|++.
T Consensus 102 ~G~a~GgG~~lal~cD~ria~~~a~~~~pe~~~g~~~~~g~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~ 181 (253)
T 1uiy_A 102 NGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIAPP 181 (253)
T ss_dssp CSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECT
T ss_pred CCEEEHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHCCCCCEECCH
T ss_conf 38576288999973478895455511574000622674599999998789999998732985779999867996386576
Q ss_pred C
Q ss_conf 8
Q gi|254780588|r 268 P 268 (317)
Q Consensus 268 P 268 (317)
.
T Consensus 182 ~ 182 (253)
T 1uiy_A 182 G 182 (253)
T ss_dssp T
T ss_pred H
T ss_conf 8
No 49
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=98.03 E-value=0.00012 Score=52.57 Aligned_cols=137 Identities=14% Similarity=0.114 Sum_probs=92.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCC----CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 77683689999999999997199489999535324-6778----430027999999988862379988999961677775
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAY-PGVD----AEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGG 204 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~-~g~~----aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGG 204 (317)
...+++-++.....++.++.-.+-+|-|--.++++ .|.+ .+..............+..+..|+|+.|-|-+.+||
T Consensus 43 Nal~~~m~~eL~~~l~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~i~~~~kpvIaav~G~a~GgG 122 (264)
T 3he2_A 43 NALNSQLVEELTQAIRKAGDGSARAIVLTGQGTAFCAGADLSGDAFAADYPDRLIELHKAMDASPMPVVGAINGPAIGAG 122 (264)
T ss_dssp TCBCHHHHHHHHHHHHCC---CCSEEEEEESSSCSBCCBCCTTCTTGGGHHHHHHHHHHHHHHCSSCEEEEECSCEETHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCEEEHHH
T ss_conf 89899999999999997018995599996899851345454344430103589999999998589989999778564488
Q ss_pred CCCCCCCCCEEEECCCCEEE------ECHHH-HHHHHCC--CCHHHHHHH-HHCCCCHHHHHHCCCCCEEEC
Q ss_conf 42113320002204674012------15544-2244215--601225655-420388489997899652622
Q gi|254780588|r 205 AMGIAAANFVYMLEHAIYSV------ISPEG-AASILWR--DSSRAAQAA-IAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 205 A~a~~~~d~v~m~~~s~ysv------isPEg-~AsILwk--d~~~a~eAA-ealklTa~DL~~lGiID~II~ 266 (317)
..-...||.+++.+++.|.. +.|.+ ....|+| ...++.+.. ..-+++|+++++.|+||+|.+
T Consensus 123 ~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~eA~~~GLv~~v~~ 194 (264)
T 3he2_A 123 LQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGT 194 (264)
T ss_dssp HHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEECC
T ss_pred HHHHHHCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCEECC
T ss_conf 999984466652034445474012300677168889999819167789998389788899976894638546
No 50
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomics, center for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=98.02 E-value=9e-05 Score=53.35 Aligned_cols=138 Identities=19% Similarity=0.225 Sum_probs=95.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEC-CCCCCCCCC----------CCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 776836899999999999971-9948999953-532467784----------3002799999998886237998899996
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDT-AGAYPGVDA----------EARGQGEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDt-pGa~~g~~a----------E~~G~~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
..++++-++-....++.+++- ++-+|-|.-. ++++.+-.- +.........+.+..+..+..|+|+.|-
T Consensus 31 Nal~~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaaV~ 110 (265)
T 3kqf_A 31 NSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAIN 110 (265)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 99999999999999999864899569999658996132431255542000011000013565799999968988899996
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHH-HHCC--CCHHHHHH-HHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 167777542113320002204674012------15544224-4215--60122565-54203884899978996526228
Q gi|254780588|r 198 GEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAAS-ILWR--DSSRAAQA-AIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 198 geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~As-ILwk--d~~~a~eA-AealklTa~DL~~lGiID~II~E 267 (317)
|...+||+.-...||.+++.+++.|+. +.|.+.++ .|.+ ...++.+. -..-.++|+++++.|+||+|++.
T Consensus 111 G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~llltg~~~~a~ea~~~Glv~~vv~~ 190 (265)
T 3kqf_A 111 GIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVPV 190 (265)
T ss_dssp SEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred EEEEEHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCH
T ss_conf 68951788998737889976998898864487208884288870887329999999984886788999974997676687
No 51
>2iex_A Dihydroxynapthoic acid synthetase; crotonase-like family, beta-BETA-alpha, coenzyme biosyntheses, naphthoate synthase; 2.20A {Geobacillus kaustophilus HTA426} PDB: 2uzf_A*
Probab=98.02 E-value=3.8e-05 Score=56.03 Aligned_cols=137 Identities=15% Similarity=0.259 Sum_probs=92.0
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCC-CCCCCCCCC-HHH----------HHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 76836899999999999971-994899995353-246778430-027----------99999998886237998899996
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAG-AYPGVDAEA-RGQ----------GEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpG-a~~g~~aE~-~G~----------~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
.++++-++.....++.+++- .+-+|-+.-..+ +..|-+-.+ ... .......+..+.++..|+|+.|-
T Consensus 35 als~~m~~~l~~al~~~~~d~~v~~vvl~g~g~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~ 114 (272)
T 2iex_A 35 AFRPKTVNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVGEDEIPRLNVLDLQRLIRVIPKPVIAMVA 114 (272)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBC---------------CCCTHHHHHHHHHHSSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 98999999999999998619995599984378654003771877603564202456777777899999839998999988
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHHH-HHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 167777542113320002204674012------155442244215---60122565-54203884899978996526228
Q gi|254780588|r 198 GEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQA-AIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 198 geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~eA-AealklTa~DL~~lGiID~II~E 267 (317)
|-..+||.--...||.+++.++++|+. +.|.++.+.++. ...++.+. -..-.+++++++++|+||+|.+.
T Consensus 115 G~a~GgG~~lal~~D~ria~~~a~f~~pe~~lGl~p~~~~~~~l~r~vg~~~a~~lll~g~~i~a~eA~~~Glv~~v~~~ 194 (272)
T 2iex_A 115 GYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGAGYLARIVGHKKAREIWYLCRQYTAQEALEMGLVNKVVPL 194 (272)
T ss_dssp SEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSSSEEECG
T ss_pred CEEEHHHHHHHHCCCCCEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEECH
T ss_conf 98437899998603644566887898750013407660157899999729999999970886569999767997698077
No 52
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus HB8} SCOP: c.14.1.3
Probab=97.99 E-value=7.6e-05 Score=53.89 Aligned_cols=137 Identities=11% Similarity=0.093 Sum_probs=96.7
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCCC-----------HHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 76836899999999999971-99489999535324-6778430-----------02799999998886237998899996
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAEA-----------RGQGEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE~-----------~G~~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
.++++-++-..+.++.++.- ++-+|-|--+++++ .|.+-.+ ....+.+.+.+..+.++..|+|+.|-
T Consensus 33 al~~~~~~el~~~l~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~ 112 (264)
T 1wz8_A 33 AMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAAVE 112 (264)
T ss_dssp CBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 88999999999999998668998699997899984389975202554334778888899999999999978998999974
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC---CHHHHH-HHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 167777542113320002204674012------1554422442156---012256-554203884899978996526228
Q gi|254780588|r 198 GEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD---SSRAAQ-AAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 198 geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd---~~~a~e-AAealklTa~DL~~lGiID~II~E 267 (317)
|-..+||..-...||.+++.+++.|.. +.|.+..+.+|.. ..++.+ .-..-.+||+++++.|+||+|++.
T Consensus 113 G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~ 192 (264)
T 1wz8_A 113 KVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVED 192 (264)
T ss_dssp SEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCEEHHHHHHHTSSSEEECG
T ss_pred CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEECCH
T ss_conf 84052888999864403011555432532111778884278999999988899999980996269999984996475287
No 53
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula 19L} PDB: 2q34_A 2q2x_A
Probab=97.99 E-value=5e-05 Score=55.21 Aligned_cols=136 Identities=17% Similarity=0.251 Sum_probs=89.5
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCCCHHHHH----HHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 76836899999999999971-99489999535324-677843002799----9999988862379988999961677775
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAEARGQGE----AIARATEMCLKLQVPILSIIIGEGGSGG 204 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE~~G~~~----aia~~l~~~~~~~vP~i~vv~geg~sGG 204 (317)
..+++-++-..+.++.+++- .+-+|-|--.++++ .|.+-++-.... .+.+.+..+.++..|+|+.|-|-..+||
T Consensus 26 al~~~~~~el~~~~~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG 105 (243)
T 2q35_A 26 GFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVEVLDLSGLILDCEIPIIAAMQGHSFGGG 105 (243)
T ss_dssp BSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCCCCCCCHHHHHTCCSCEEEEECSEEETHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEECC
T ss_conf 98999999999999999769896799997889844798844544202211378999999998489989999688577166
Q ss_pred CCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHHH-HHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 42113320002204674012------155442244215---60122565-5420388489997899652622
Q gi|254780588|r 205 AMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQA-AIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 205 A~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~eA-AealklTa~DL~~lGiID~II~ 266 (317)
..-...||.+++.++++|+. +.|.+..+.++. ...++.+. -..-.++|++++++|+||+|+|
T Consensus 106 ~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~ 177 (243)
T 2q35_A 106 LLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVS 177 (243)
T ss_dssp HHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTCSSCEEC
T ss_pred CHHCCCCCEEEECCCCEECCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCEECCC
T ss_conf 620204667875243433165003145556764112122345388877650389898999997799407088
No 54
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics, protein structure initiative; 1.58A {Legionella pneumophila subsp}
Probab=97.98 E-value=0.00019 Score=51.03 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=90.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCC-CCCCCCCCC------------HHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 776836899999999999971-994899995353-246778430------------027999999988862379988999
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAG-AYPGVDAEA------------RGQGEAIARATEMCLKLQVPILSI 195 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpG-a~~g~~aE~------------~G~~~aia~~l~~~~~~~vP~i~v 195 (317)
...+++-.+-..+.++.+++- .+=+|-+--.+. |..|.+-.+ ........+.+..+..+..|+|+.
T Consensus 26 Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaa 105 (268)
T 3i47_A 26 NAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAM 105 (268)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999999999999974999069999167776335641554311122210000246788999999998489878999
Q ss_pred EECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC--CHHHHH-HHHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 96167777542113320002204674012------1554422442156--012256-55420388489997899652622
Q gi|254780588|r 196 IIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD--SSRAAQ-AAIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 196 v~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd--~~~a~e-AAealklTa~DL~~lGiID~II~ 266 (317)
|-|-..+||..-...||.+++.+++.|+. +.|.+..+.+.+- ..++.+ .-..-+++|+++++.|+||+|+|
T Consensus 106 v~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~ 185 (268)
T 3i47_A 106 VQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISPYVVRAIGERAAKMLFMSAEVFDATRAYSLNLVQHCVP 185 (268)
T ss_dssp ECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHHHHHHHHCHHHHHHHHHHCCEEEHHHHHHTTSCSEEEC
T ss_pred ECCEEEECCCHHHCCCCEEECCCCCEEECCEEEEEECCCCCHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEC
T ss_conf 67858505521110442456279979987424566457642132220345667899876089788899977798108608
No 55
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, alternative splicing, fatty acid metabolism, enoyl coenzyme A hydratase; 2.3A {Homo sapiens}
Probab=97.96 E-value=0.00052 Score=47.99 Aligned_cols=154 Identities=13% Similarity=0.134 Sum_probs=95.2
Q ss_pred EECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCC----------C
Q ss_conf 75380089998458775023442026776836899999999999971-99489999535324-677843----------0
Q gi|254780588|r 104 RFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAE----------A 171 (317)
Q Consensus 104 ~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE----------~ 171 (317)
.+|| |+.|-- +|+.+ ...++++-++-....++-+++- .+-+|-+-=+++++ .|.+-. .
T Consensus 39 ~~DG--Va~Itl-------nrP~~-~Nals~~~~~~l~~~l~~~~~d~~v~vvvltg~g~~F~aG~Dl~~~~~~~~~~~~ 108 (287)
T 2vx2_A 39 QLDG--IRNIVL-------SNPKK-RNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYH 108 (287)
T ss_dssp EETT--EEEEEE-------CCGGG-TTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHH
T ss_pred EECC--EEEEEE-------CCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHCCCHHHHH
T ss_conf 3088--899997-------48887-7999999999999999998508996699997889986477541222000012466
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC--CCHHHHH
Q ss_conf 02799999998886237998899996167777542113320002204674012------155442244215--6012256
Q gi|254780588|r 172 RGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR--DSSRAAQ 243 (317)
Q Consensus 172 ~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk--d~~~a~e 243 (317)
.-....+...+..+..+.+|+|+.|-|...+||..-...||.+++.+++.|+. +.|-.-.+-|+| ...++.+
T Consensus 109 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~l~r~lg~~~a~~ 188 (287)
T 2vx2_A 109 AEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVALARAVPRKVALE 188 (287)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCEEEHHHHHHHHHCCCCEECCCCEEECHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 77776799999999728987799968866166788876056453778868987111527078722788999999999999
Q ss_pred H-HHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 5-54203884899978996526228
Q gi|254780588|r 244 A-AIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 244 A-AealklTa~DL~~lGiID~II~E 267 (317)
. -..-.++|+++++.|+||+|+|.
T Consensus 189 llltg~~~~a~eA~~~GLv~~vv~~ 213 (287)
T 2vx2_A 189 MLFTGEPISAQEALLHGLLSKVVPE 213 (287)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred HHHCCCCCCHHHHHHCCCEEEECCH
T ss_conf 9983994788999878770261786
No 56
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=97.96 E-value=0.00026 Score=50.10 Aligned_cols=137 Identities=15% Similarity=0.190 Sum_probs=88.7
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEE-CCCCC-CCCCC---------CCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 76836899999999999971-994899995-35324-67784---------30027999999988862379988999961
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFID-TAGAY-PGVDA---------EARGQGEAIARATEMCLKLQVPILSIIIG 198 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvD-tpGa~-~g~~a---------E~~G~~~aia~~l~~~~~~~vP~i~vv~g 198 (317)
.++++-++.....++.+++- .+-+|-|.= -+++| .|.+- +.......+.+.+..+..+..|+|+.|-|
T Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIa~v~G 106 (260)
T 1sg4_A 27 SLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAING 106 (260)
T ss_dssp EECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 89999999999999999858995599998289994528997655421010012221256789999975589978998567
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCEEEE--------CHHHHHH-HHCC--CCHHHHH-HHHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 677775421133200022046740121--------5544224-4215--6012256-55420388489997899652622
Q gi|254780588|r 199 EGGSGGAMGIAAANFVYMLEHAIYSVI--------SPEGAAS-ILWR--DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 199 eg~sGGA~a~~~~d~v~m~~~s~ysvi--------sPEg~As-ILwk--d~~~a~e-AAealklTa~DL~~lGiID~II~ 266 (317)
...+||.--...||.+++.+++-|..- .|.+.++ .|-+ -..++.+ .-..-.++|.+++++|+||+|+|
T Consensus 107 ~a~GgG~~la~~~D~ria~~~ak~~~~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~ 186 (260)
T 1sg4_A 107 ACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVP 186 (260)
T ss_dssp EBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBCHHHHHHHTSSSEEEC
T ss_pred CEECCCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCEEECC
T ss_conf 31056311110233234222232211132234486788104555777608999999998289887067754784046488
Q ss_pred C
Q ss_conf 8
Q gi|254780588|r 267 E 267 (317)
Q Consensus 267 E 267 (317)
.
T Consensus 187 ~ 187 (260)
T 1sg4_A 187 E 187 (260)
T ss_dssp G
T ss_pred H
T ss_conf 6
No 57
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=97.94 E-value=0.00036 Score=49.07 Aligned_cols=139 Identities=12% Similarity=0.152 Sum_probs=93.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECCCCC-CCCCCCC------H----HHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 7768368999999999999719-9489999535324-6778430------0----2799999998886237998899996
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRFK-IPVISFIDTAGAY-PGVDAEA------R----GQGEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f~-lPiv~lvDtpGa~-~g~~aE~------~----G~~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
..++++-++-..+.++.++.-. +-+|-+--.++++ .|.+-.+ . .......+.+..+..+..|+|+.|-
T Consensus 48 Nals~~~~~eL~~al~~~~~d~~vrvvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~ 127 (286)
T 3myb_A 48 NALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVH 127 (286)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 89899999999999999974899569999569997137878899834676778888887778999999849998899988
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC--CHHHHH-HHHHCCCCHHHHHHCCCCCEEECCC
Q ss_conf 167777542113320002204674012------1554422442156--012256-5542038848999789965262288
Q gi|254780588|r 198 GEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD--SSRAAQ-AAIAMKIIATDLQDLSIIDGIIPEP 268 (317)
Q Consensus 198 geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd--~~~a~e-AAealklTa~DL~~lGiID~II~EP 268 (317)
|-+.+||.--...||.+++.+++.|+. +.|-.....|.+- ..++.+ .-..-.++|++++++|+||+|++..
T Consensus 128 G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~l~~~vG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~ 207 (286)
T 3myb_A 128 GIATAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVALSRNVGRKAAFEMLVTGEFVSADDAKGLGLVNRVVAPK 207 (286)
T ss_dssp SCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCHHHHHHHTTTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred CEEEHHHHHHHHHCCEEEECCCCEEECCCEEECCCCCCCCCCHHHHHCHHHHHHHHHCCCEECHHHHHHCCCCEECCCHH
T ss_conf 98752668898716668976998898863015506787654147671899999995569755778998779974517867
No 58
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=97.94 E-value=0.00044 Score=48.50 Aligned_cols=137 Identities=14% Similarity=0.219 Sum_probs=90.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCCC----HH----------HHHHHHHHHHHHHCCCCCEE
Q ss_conf 776836899999999999971-99489999535324-6778430----02----------79999999888623799889
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAEA----RG----------QGEAIARATEMCLKLQVPIL 193 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE~----~G----------~~~aia~~l~~~~~~~vP~i 193 (317)
..++++-++.....++.++.- ++-+|-|--.++++ .|.+-.+ .+ ......+.+..+..+..|+|
T Consensus 25 Nal~~~~~~el~~~l~~~~~d~~v~vvvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp~I 104 (269)
T 1nzy_A 25 NALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVL 104 (269)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 89899999999999999985889169999799986357864887641345431156788888889999999996899999
Q ss_pred EEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC---CHHH-HHHHHHCCCCHHHHHHCCCCCE
Q ss_conf 9996167777542113320002204674012------1554422442156---0122-5655420388489997899652
Q gi|254780588|r 194 SIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD---SSRA-AQAAIAMKIIATDLQDLSIIDG 263 (317)
Q Consensus 194 ~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd---~~~a-~eAAealklTa~DL~~lGiID~ 263 (317)
+.|-|...+||..-...||.+++.+++.|.. +.|.+..+..+.. ..++ +-.-..-.++|++++++|+||+
T Consensus 105 aav~G~a~GgG~~lal~~D~ria~~~a~f~~~~~~~g~~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~ 184 (269)
T 1nzy_A 105 AAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSR 184 (269)
T ss_dssp EEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCBCHHHHHHHTSCSC
T ss_pred EEEHHHHCCCCHHHHHCCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHCCCCE
T ss_conf 97330205640565541214456453011476542621578238999999809465312023489887999998099887
Q ss_pred EEC
Q ss_conf 622
Q gi|254780588|r 264 IIP 266 (317)
Q Consensus 264 II~ 266 (317)
|++
T Consensus 185 vv~ 187 (269)
T 1nzy_A 185 VYP 187 (269)
T ss_dssp EEC
T ss_pred ECC
T ss_conf 548
No 59
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=97.94 E-value=0.00036 Score=49.12 Aligned_cols=160 Identities=14% Similarity=0.120 Sum_probs=97.8
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCCC---------------HHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 7683689999999999997-199489999535324-6778430---------------0279999999888623799889
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAEA---------------RGQGEAIARATEMCLKLQVPIL 193 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE~---------------~G~~~aia~~l~~~~~~~vP~i 193 (317)
.++++-++-....++.++. -.+-+|-|--.+++| .|.+-.+ .-........+..+..+..|+|
T Consensus 29 al~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpvI 108 (263)
T 3l3s_A 29 PLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPTI 108 (263)
T ss_dssp CCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHHHHHHTCSSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999999999999999758895699997899985867520213344445420024678999999999999986799889
Q ss_pred EEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC--CCHHHHH-HHHHCCCCHHHHHHCCCCCEE
Q ss_conf 9996167777542113320002204674012------155442244215--6012256-554203884899978996526
Q gi|254780588|r 194 SIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR--DSSRAAQ-AAIAMKIIATDLQDLSIIDGI 264 (317)
Q Consensus 194 ~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk--d~~~a~e-AAealklTa~DL~~lGiID~I 264 (317)
+.|-|-+.+||.--...||.+++.+++.|.. +.|-+....+.| -..++.+ +-..-.++|+++++.|+||+|
T Consensus 109 aav~G~a~GgG~~lal~~D~ria~~~a~~~~p~~~~g~~~~~~~~~l~r~ig~~~a~~l~ltg~~i~a~eA~~~Glv~~v 188 (263)
T 3l3s_A 109 ALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGFCTTPAVAVSRVIGRRAVTEMALTGATYDADWALAAGLINRI 188 (263)
T ss_dssp EEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSCCHHHHHHHHTTSCHHHHHHHHHHCCEEEHHHHHHHTSSSEE
T ss_pred EEECCCEECCCHHHHHCCCCCEECCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEE
T ss_conf 98458076141634542233222102412164220611510133102334546666542265886689999986996386
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 228898444898999999999999999998589989999
Q gi|254780588|r 265 IPEPIGGAHRNPAQTISSVGEIISQFLSETSTYSETEIR 303 (317)
Q Consensus 265 I~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li 303 (317)
+|. +.+.....+-...+.+.++..+.
T Consensus 189 v~~-------------~~l~~~a~~~a~~la~~~~~ai~ 214 (263)
T 3l3s_A 189 LPE-------------AALATHVADLAGALAARNQAPLR 214 (263)
T ss_dssp CCH-------------HHHHHHHHHHHHHHHSSCHHHHH
T ss_pred CCH-------------HHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 288-------------89999999999999868999999
No 60
>3h02_A Naphthoate synthase; IDP00995, lyase, structural genomics, center for structural genomics of infectious diseases, csgid; 2.15A {Salmonella typhimurium}
Probab=97.93 E-value=8.3e-05 Score=53.60 Aligned_cols=137 Identities=15% Similarity=0.180 Sum_probs=89.1
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCC-EEEEEECC-CCC-CCCCCCC-----------HHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 76836899999999999971994-89999535-324-6778430-----------0279999999888623799889999
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRFKIP-VISFIDTA-GAY-PGVDAEA-----------RGQGEAIARATEMCLKLQVPILSII 196 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f~lP-iv~lvDtp-Ga~-~g~~aE~-----------~G~~~aia~~l~~~~~~~vP~i~vv 196 (317)
..+++-++-....++.++.-.-. +|-|.-.. .++ .|..-.+ ......+...+..+..+..|+|+.|
T Consensus 50 als~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~d~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIaav 129 (288)
T 3h02_A 50 AFRPLTVKEMIQALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAMV 129 (288)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCC---------------CCCTHHHHHHHHHHCSSCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 99999999999999999739996689998799974234630776643254420145655323689999970999899998
Q ss_pred ECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHH-HHHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 6167777542113320002204674012------155442244215---6012256-55420388489997899652622
Q gi|254780588|r 197 IGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 197 ~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~e-AAealklTa~DL~~lGiID~II~ 266 (317)
-|-+.+||+.-...||.+++.+++.|+. +.|.++.+.+|. ...++.+ +...-.++|+++++.|+||+|++
T Consensus 130 ~G~a~GgG~~la~~cD~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~ 209 (288)
T 3h02_A 130 AGYSIGGGHVLHMMCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAQQALDMGLVNTVVP 209 (288)
T ss_dssp CSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSHHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSSSEEEC
T ss_pred CCEEEEHHHHHHHHCCEEECCCCCEEECHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHCCCEEEECC
T ss_conf 89875063899873571041698589872442176786658999999848999999997598415999998899878546
Q ss_pred C
Q ss_conf 8
Q gi|254780588|r 267 E 267 (317)
Q Consensus 267 E 267 (317)
.
T Consensus 210 ~ 210 (288)
T 3h02_A 210 L 210 (288)
T ss_dssp G
T ss_pred H
T ss_conf 3
No 61
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=97.92 E-value=0.00033 Score=49.37 Aligned_cols=137 Identities=16% Similarity=0.234 Sum_probs=90.2
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCCCHHH--------------------HHHHHHHHHHHHCC
Q ss_conf 7683689999999999997-199489999535324-6778430027--------------------99999998886237
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAEARGQ--------------------GEAIARATEMCLKL 188 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE~~G~--------------------~~aia~~l~~~~~~ 188 (317)
.++++-.+-..+.++.++. -.+-+|-|--.++++ .|.+-.+.+. .....+.+..+..+
T Consensus 27 als~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 106 (275)
T 1dci_A 27 AMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKC 106 (275)
T ss_dssp CBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999758996799996789874166438887401134542100025677888899999999999738
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHH-HHCCC---CHHHHHHH-HHCCCCHHHHHH
Q ss_conf 998899996167777542113320002204674012------15544224-42156---01225655-420388489997
Q gi|254780588|r 189 QVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAAS-ILWRD---SSRAAQAA-IAMKIIATDLQD 257 (317)
Q Consensus 189 ~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~As-ILwkd---~~~a~eAA-ealklTa~DL~~ 257 (317)
.+|+|+.|-|.+.+||..-...||.+++.+++.|+. +.|.+..+ .+++- ...+.+.. ..-.+||+++++
T Consensus 107 ~kPvIaav~G~a~GGG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~~~~~ll~~g~~~~a~eA~~ 186 (275)
T 1dci_A 107 PKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALD 186 (275)
T ss_dssp SSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHHCCEEEHHHHHH
T ss_pred CCCEEEEECCEEEHHHHHHHHCCCEEEECCCCCEECCCEEECCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99899998896230648987544651104787223632146456465627789998520666566662156668778876
Q ss_pred CCCCCEEECC
Q ss_conf 8996526228
Q gi|254780588|r 258 LSIIDGIIPE 267 (317)
Q Consensus 258 lGiID~II~E 267 (317)
.|+||+|+|.
T Consensus 187 ~Glv~~vv~~ 196 (275)
T 1dci_A 187 SGLVSRVFPD 196 (275)
T ss_dssp HTSSSEEESS
T ss_pred CCCEEEEECC
T ss_conf 8953697185
No 62
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA; 1.80A {Geobacillus kaustophilus HTA426} PDB: 2qq3_A
Probab=97.91 E-value=0.00022 Score=50.60 Aligned_cols=137 Identities=17% Similarity=0.220 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCC-CCCCCCCCHH-----HHH--HHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 76836899999999999971-9948999953532-4677843002-----799--9999988862379988999961677
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGA-YPGVDAEARG-----QGE--AIARATEMCLKLQVPILSIIIGEGG 201 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa-~~g~~aE~~G-----~~~--aia~~l~~~~~~~vP~i~vv~geg~ 201 (317)
.++++-.+-....++.+++- .+=+|-|--..+. ..|.+-.+.. ... ........+..+.+|+|+.|-|-..
T Consensus 28 al~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~f~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Iaai~G~a~ 107 (258)
T 2pbp_A 28 ALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLAL 107 (258)
T ss_dssp CCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTTHHHHHHHTCCSCEEEEECSEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEE
T ss_conf 99999999999999998609985899990798640127538877313211467777767889985189988999806576
Q ss_pred CCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHH-HCC--CCHHHHH-HHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 77542113320002204674012------155442244-215--6012256-554203884899978996526228
Q gi|254780588|r 202 SGGAMGIAAANFVYMLEHAIYSV------ISPEGAASI-LWR--DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 202 sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsI-Lwk--d~~~a~e-AAealklTa~DL~~lGiID~II~E 267 (317)
+||..-...||.++|.+++.|+. +.|.+.++- |-| ...++.+ .-..-.+++++++++|+||+|+|.
T Consensus 108 GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 183 (258)
T 2pbp_A 108 GGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAEQLGIVNRVVSP 183 (258)
T ss_dssp THHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECG
T ss_pred EHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHCCCEEEEECH
T ss_conf 1668998627879987997898731156879872299999998689999999982997879999988990187257
No 63
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=97.88 E-value=0.00029 Score=49.79 Aligned_cols=138 Identities=15% Similarity=0.229 Sum_probs=90.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCCC----------HHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 776836899999999999971-99489999535324-6778430----------02799999998886237998899996
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAEA----------RGQGEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE~----------~G~~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
..++++-.+-....++.+++- .+-+|-+--.++++ .|.+-.+ ..........+..+..+.+|+|+.|-
T Consensus 27 Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvIaav~ 106 (261)
T 3pea_A 27 NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIH 106 (261)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 88999999999999999986889289999489997358874555410001110001222124677776624786899994
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHC-C--CCHHHHHH-HHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 167777542113320002204674012------15544224421-5--60122565-54203884899978996526228
Q gi|254780588|r 198 GEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILW-R--DSSRAAQA-AIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 198 geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILw-k--d~~~a~eA-AealklTa~DL~~lGiID~II~E 267 (317)
|-..+||..-...||.++|.+++.|+. +.|.++.+-.+ | ...++.+. -..-.++|++++++|+||+|++.
T Consensus 107 G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 186 (261)
T 3pea_A 107 GAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPITGAEALKWGLVNGVFAE 186 (261)
T ss_dssp SEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred EEEEHHHHHHHHCCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCH
T ss_conf 38862888877504559987999897873156768661399999999575523331221871449999864997767785
No 64
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=97.86 E-value=0.00044 Score=48.51 Aligned_cols=137 Identities=19% Similarity=0.241 Sum_probs=89.1
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCC-CCCCCCC---CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 7683689999999999997-19948999953532-4677843---00279999999888623799889999616777754
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGA-YPGVDAE---ARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGA 205 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa-~~g~~aE---~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA 205 (317)
.++++-.+.....++.+++ -.+.+|-+--++.. ..|..-. ..............+..+.+|+|+.|-|-+.+||+
T Consensus 29 al~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~f~~g~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~ 108 (255)
T 3p5m_A 29 AVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTAGAADAANRVVRAITSLPKPVIAGVHGAAVGFGC 108 (255)
T ss_dssp EECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEEHHH
T ss_conf 98999999999999999749992799996667653357743012223431257799999981999899997898873778
Q ss_pred CCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHHHHH-HCCCCHHHHHHCCCCCEEECC
Q ss_conf 2113320002204674012------155442244215---6012256554-203884899978996526228
Q gi|254780588|r 206 MGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQAAI-AMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 206 ~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~eAAe-alklTa~DL~~lGiID~II~E 267 (317)
.-...||.+++.+++.|+. +.|.+.++-+.+ ....+.+..- .-.++++++++.|+||+|++.
T Consensus 109 ~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~~~l~g~~~~a~ea~~~Glv~~vv~~ 180 (255)
T 3p5m_A 109 SLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSA 180 (255)
T ss_dssp HHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEECCT
T ss_pred HHHHHCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCEEECH
T ss_conf 998737889978998896772040646555763245544543100211113787889999876993488182
No 65
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative; 2.00A {Acinetobacter baumannii atcc 17978}
Probab=97.82 E-value=0.0011 Score=45.61 Aligned_cols=138 Identities=19% Similarity=0.267 Sum_probs=91.5
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCCC-----------HHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 7683689999999999997-199489999535324-6778430-----------02799999998886237998899996
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAEA-----------RGQGEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE~-----------~G~~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
.++++-++-....++-+++ -++-+|-|.-.++++ .|.+-.+ ..........+..+.++..|+|+.|-
T Consensus 28 al~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~ 107 (266)
T 3fdu_A 28 ALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVK 107 (266)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGGGSHHHHHHHHHHHCCSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99999999999999999758994699997898425157316665420013103444432589999999977998799863
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEE------ECHH-HHHHHHCC--CCHHHHHH-HHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 167777542113320002204674012------1554-42244215--60122565-54203884899978996526228
Q gi|254780588|r 198 GEGGSGGAMGIAAANFVYMLEHAIYSV------ISPE-GAASILWR--DSSRAAQA-AIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 198 geg~sGGA~a~~~~d~v~m~~~s~ysv------isPE-g~AsILwk--d~~~a~eA-AealklTa~DL~~lGiID~II~E 267 (317)
|-..+||.--...||.+++.+++.|+. +.|. |.+..|.+ -..++.+. -..-.++|++++++|+||+|+++
T Consensus 108 G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~ 187 (266)
T 3fdu_A 108 GVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIVED 187 (266)
T ss_dssp SEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCEECHHHHHHTTSCSEECSC
T ss_pred CEEEECCCEEECCCCCCEECCCCEEECCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEECHHHHHHCCCEEEECCC
T ss_conf 84746452322152311114797897862532888211078999999550265321105856228889778972277784
Q ss_pred C
Q ss_conf 8
Q gi|254780588|r 268 P 268 (317)
Q Consensus 268 P 268 (317)
+
T Consensus 188 ~ 188 (266)
T 3fdu_A 188 A 188 (266)
T ss_dssp H
T ss_pred H
T ss_conf 8
No 66
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=97.81 E-value=0.00039 Score=48.84 Aligned_cols=138 Identities=12% Similarity=0.185 Sum_probs=86.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCCCHHH---------HHH-----HHHHHHHHHCCCCCEE
Q ss_conf 776836899999999999971-99489999535324-6778430027---------999-----9999888623799889
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAEARGQ---------GEA-----IARATEMCLKLQVPIL 193 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE~~G~---------~~a-----ia~~l~~~~~~~vP~i 193 (317)
..++++-.+-....++.+++- .+-+|-+--.++++ .|.+-.+-.. ... ....+..+..+.+|+|
T Consensus 31 Nal~~~~~~~l~~al~~~~~d~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvI 110 (276)
T 2j5i_A 31 NAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTI 110 (276)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHHHHHHHHHHHTTTTTTCSSCEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 78899999999999999973999179999789886417887899864100221035666667778889999997899899
Q ss_pred EEEECCCCCCCCCCCCCCCCEEEECCCCEEEE------CHHHHH-HHHCC--CCHHHHHHH-HHCCCCHHHHHHCCCCCE
Q ss_conf 99961677775421133200022046740121------554422-44215--601225655-420388489997899652
Q gi|254780588|r 194 SIIIGEGGSGGAMGIAAANFVYMLEHAIYSVI------SPEGAA-SILWR--DSSRAAQAA-IAMKIIATDLQDLSIIDG 263 (317)
Q Consensus 194 ~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvi------sPEg~A-sILwk--d~~~a~eAA-ealklTa~DL~~lGiID~ 263 (317)
+.|-|...+||..-...||.++|.+++.|+.- .|.+.. ..|.+ ...++.+.. ..-++||.++++.|+||+
T Consensus 111 aav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~Glv~~ 190 (276)
T 2j5i_A 111 AMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNE 190 (276)
T ss_dssp EEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSSSE
T ss_pred EECCCCEEHHHHHHHHCCCHHEECCCCCEECCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHCCCCCE
T ss_conf 94699450043487753441006788840033232324886117999999828145545530588787468997299347
Q ss_pred EECC
Q ss_conf 6228
Q gi|254780588|r 264 IIPE 267 (317)
Q Consensus 264 II~E 267 (317)
|+|.
T Consensus 191 vv~~ 194 (276)
T 2j5i_A 191 SVPL 194 (276)
T ss_dssp EECH
T ss_pred ECCC
T ss_conf 6381
No 67
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=97.81 E-value=0.00019 Score=51.04 Aligned_cols=137 Identities=14% Similarity=0.201 Sum_probs=89.5
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCC-------CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 76836899999999999971-99489999535324-67784-------30027999999988862379988999961677
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDA-------EARGQGEAIARATEMCLKLQVPILSIIIGEGG 201 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~a-------E~~G~~~aia~~l~~~~~~~vP~i~vv~geg~ 201 (317)
.++++-++-..+.++.+++- .+-+|-|--.+..+ .|-.- ........+...+..+..+..|+|+.|-|...
T Consensus 33 al~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~f~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIa~i~G~a~ 112 (263)
T 3moy_A 33 ALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYAL 112 (263)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTTTTHHHHHHTTCCSCEEEEECBEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCHHHHHCCCCCEEEEECCCCH
T ss_conf 98999999999999987328981699986785454167633542035631022201210023430499979999886153
Q ss_pred CCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHH-HHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 77542113320002204674012------155442244215---6012256-554203884899978996526228
Q gi|254780588|r 202 SGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 202 sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~e-AAealklTa~DL~~lGiID~II~E 267 (317)
+||..-...||.+++.+++.|+. +.|.++.+-++. ...++.+ +-..-.+++++++++|+||+|++.
T Consensus 113 GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 188 (263)
T 3moy_A 113 GGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPA 188 (263)
T ss_dssp THHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECG
T ss_pred HHHHHHHHHCCEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECC
T ss_conf 9999999978999982998998964180658550289999998529999999982997889999987996795042
No 68
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=97.80 E-value=0.00085 Score=46.46 Aligned_cols=136 Identities=16% Similarity=0.078 Sum_probs=88.2
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCCC------------------------------------
Q ss_conf 77683689999999999997-199489999535324-6778430------------------------------------
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAEA------------------------------------ 171 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE~------------------------------------ 171 (317)
..++++-++-....++.++. -.+-+|-|-=.+.++ .|.+-.+
T Consensus 57 Nals~~m~~el~~~l~~~~~d~~vrviVltG~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (333)
T 3njd_A 57 NAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWDP 136 (333)
T ss_dssp TCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCTTSTTCHHHHHHTTCSSSCCCH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 89999999999999999972999459999789998558887688761232334554200011101455420354223452
Q ss_pred ---HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHH------HHCC--CCHH
Q ss_conf ---0279999999888623799889999616777754211332000220467401215544224------4215--6012
Q gi|254780588|r 172 ---RGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAAS------ILWR--DSSR 240 (317)
Q Consensus 172 ---~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~As------ILwk--d~~~ 240 (317)
.-......+.+..+..+.+|+|+.|-|-+.+||..-...||.++|.+++.|+. ||.--- .|++ -..+
T Consensus 137 ~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lal~~D~ria~~~a~f~~--pe~~~G~~p~~~~l~r~iG~~~ 214 (333)
T 3njd_A 137 MVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGY--PPMRVWGVPAAGLWAHRLGDQR 214 (333)
T ss_dssp HHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCEEEC--GGGGTTCCCTTCCHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCEECCCCCEEEECCCCEEEC--CCEEECCCCCCCHHHHHHCHHH
T ss_conf 67899999999999999958998899978878624331103577799879988988--7044126775205656515798
Q ss_pred HHHH-HHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 2565-54203884899978996526228
Q gi|254780588|r 241 AAQA-AIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 241 a~eA-AealklTa~DL~~lGiID~II~E 267 (317)
+.+. -..-.++|+++++.|+||+|+|.
T Consensus 215 A~~llltg~~i~A~eA~~~Glv~~vv~~ 242 (333)
T 3njd_A 215 AKRLLFTGDCITGAQAAEWGLAVEAPDP 242 (333)
T ss_dssp HHHHHTTCCEEEHHHHHHTTSSSBCCCG
T ss_pred HHHHHHHCCCCHHHHHHHCCCEEEECCH
T ss_conf 9999860883029999987990196287
No 69
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metabolism, lipid metabolism, lyase; 1.80A {Mycobacterium tuberculosis}
Probab=97.80 E-value=0.00011 Score=52.82 Aligned_cols=139 Identities=13% Similarity=0.150 Sum_probs=93.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHCC-CCEEEEEECCCC-CCCCCCCC-------HHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 7768368999999999999719-948999953532-46778430-------02799999998886237998899996167
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRFK-IPVISFIDTAGA-YPGVDAEA-------RGQGEAIARATEMCLKLQVPILSIIIGEG 200 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f~-lPiv~lvDtpGa-~~g~~aE~-------~G~~~aia~~l~~~~~~~vP~i~vv~geg 200 (317)
..++++-++.....++.+++-. +-+|-+--.+++ ..|.+-.+ ........+.+..+..+..|+|+.|-|..
T Consensus 47 Nal~~~~~~~l~~al~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvIa~v~G~a 126 (278)
T 3h81_A 47 NALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYA 126 (278)
T ss_dssp TCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHHHHHHTTTGGGHHHHTCCSCEEEEECBEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEE
T ss_conf 89999999999999999975888489999479874003675787652111121367888887775348998999980727
Q ss_pred CCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHC-C--CCHHHHH-HHHHCCCCHHHHHHCCCCCEEECCC
Q ss_conf 777542113320002204674012------15544224421-5--6012256-5542038848999789965262288
Q gi|254780588|r 201 GSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILW-R--DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIPEP 268 (317)
Q Consensus 201 ~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILw-k--d~~~a~e-AAealklTa~DL~~lGiID~II~EP 268 (317)
.+||+--...||.+++.+++.|+. +.|.+..+-.+ | ...++.+ +-..-.++|++++++|+||+|++.+
T Consensus 127 ~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ig~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~ 204 (278)
T 3h81_A 127 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPAD 204 (278)
T ss_dssp ETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred CHHHHHHHHHCCEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHCCCCCEECCHH
T ss_conf 179899999789999839988978511816686413999999984899999999829967899999869972500067
No 70
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; 2.05A {Streptomyces coelicolor A3}
Probab=97.79 E-value=0.00064 Score=47.33 Aligned_cols=137 Identities=15% Similarity=0.208 Sum_probs=89.7
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCC-CCCCCCCCC-------------HHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 76836899999999999971-994899995353-246778430-------------027999999988862379988999
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAG-AYPGVDAEA-------------RGQGEAIARATEMCLKLQVPILSI 195 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpG-a~~g~~aE~-------------~G~~~aia~~l~~~~~~~vP~i~v 195 (317)
.++++-++-....++.+++- .+-+|-+--.+. +..|-+-.+ ........+.+..+..+.+|+|+.
T Consensus 40 als~~~~~el~~al~~~~~d~~v~~vVitg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaa 119 (279)
T 3g64_A 40 ALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVIAA 119 (279)
T ss_dssp CBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98999999999999999609995799994798736812505754311210002455555555666667887199989999
Q ss_pred EECCCCCCCCCCCCCCCCEEEECCCCEEE------ECH-HHHHHHHC-C--CCHHHH-HHHHHCCCCHHHHHHCCCCCEE
Q ss_conf 96167777542113320002204674012------155-44224421-5--601225-6554203884899978996526
Q gi|254780588|r 196 IIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISP-EGAASILW-R--DSSRAA-QAAIAMKIIATDLQDLSIIDGI 264 (317)
Q Consensus 196 v~geg~sGGA~a~~~~d~v~m~~~s~ysv------isP-Eg~AsILw-k--d~~~a~-eAAealklTa~DL~~lGiID~I 264 (317)
|-|-..+||.--...||.+++.+++.|+. +.| .+.++.++ | ...++. -+-..-.++|+++++.|+||+|
T Consensus 120 v~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~~g~~~~l~r~iG~~~a~~l~l~g~~i~a~eA~~~Glv~~v 199 (279)
T 3g64_A 120 LHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATRLLMLGDTVRAPEAERIGLISEL 199 (279)
T ss_dssp ECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTCCSEE
T ss_pred ECCEEEHHHHHHHHHCCEEECCCCCEEECCHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHCCCCCCC
T ss_conf 78965303289987346764164565536211028476522399999998485799999981899989999974995403
Q ss_pred ECC
Q ss_conf 228
Q gi|254780588|r 265 IPE 267 (317)
Q Consensus 265 I~E 267 (317)
+|.
T Consensus 200 v~~ 202 (279)
T 3g64_A 200 TEE 202 (279)
T ss_dssp CCT
T ss_pred CCH
T ss_conf 587
No 71
>3ome_A Enoyl-COA hydratase; ssgcid, structural genomics, structural genomics center for infectious disease, lyase; 2.05A {Mycobacterium smegmatis str}
Probab=97.79 E-value=0.00036 Score=49.14 Aligned_cols=136 Identities=15% Similarity=0.182 Sum_probs=87.4
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCC-------CCHHH-------HHHHHHHHHHHHCCCCCEEE
Q ss_conf 7683689999999999997-199489999535324-67784-------30027-------99999998886237998899
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDA-------EARGQ-------GEAIARATEMCLKLQVPILS 194 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~a-------E~~G~-------~~aia~~l~~~~~~~vP~i~ 194 (317)
.++++-.+-..+.++.++. -.+.+|-|-=++..+ .|.+- +..+. .......+..+..+.+|+|+
T Consensus 46 als~~~~~eL~~al~~~~~d~~v~~vVltg~g~~F~~G~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIa 125 (282)
T 3ome_A 46 AQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLRGGGEVPEKISLEFIIQHEARRYLDYTLRWRNVPKPSIA 125 (282)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC-------CCCHHHHHHHHHHHTTHHHHHHHHCSSCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99999999999999999868891799982687740135224312444433202455788999999999999819998999
Q ss_pred EEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC-CHHHHH-HHHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 996167777542113320002204674012------1554422442156-012256-55420388489997899652622
Q gi|254780588|r 195 IIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD-SSRAAQ-AAIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 195 vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd-~~~a~e-AAealklTa~DL~~lGiID~II~ 266 (317)
.|-|.+.+||..-...||.+++.++++|+. +.|-+.+...++- ..++.+ .-..-.++|+++++.|+||+|+|
T Consensus 126 av~G~a~GgG~~lal~~D~ria~~~a~~~~~e~~~g~~~~~~~~l~~~~g~~~A~~llltG~~~~a~eA~~~Glv~~vv~ 205 (282)
T 3ome_A 126 AVQGRCISGGLLLCWPCDLILASDDALFSDPVALMGIGGVEYHGHTWELGPRKAKEILFTGRALTAEEAERTGMVNRVVA 205 (282)
T ss_dssp EECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTCSSCSSCCHHHHHCHHHHHHHHHHCCEEEHHHHHHHTSCSEEEC
T ss_pred EECCCCCHHHHHHHHHCCHHHHCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEC
T ss_conf 96583132689997600415535576763452356106430257888861789999997288567999865499667417
No 72
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure initiative; 2.00A {Rhodopseudomonas palustris}
Probab=97.75 E-value=4.3e-05 Score=55.62 Aligned_cols=136 Identities=15% Similarity=0.100 Sum_probs=88.2
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC-CCCCCC---------CHHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 7683689999999999997199489999535324-677843---------002799999998886237998899996167
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAY-PGVDAE---------ARGQGEAIARATEMCLKLQVPILSIIIGEG 200 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~-~g~~aE---------~~G~~~aia~~l~~~~~~~vP~i~vv~geg 200 (317)
.++++-++-..+.++-++ -++-+|-|--++++| .|.+-. ..-....+.+.+..+..+..|+|+.|-|-.
T Consensus 39 al~~~~~~~L~~al~~~d-~~~rvvvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a 117 (275)
T 3hin_A 39 ALNDGLMAALKDCLTDIP-DQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAV 117 (275)
T ss_dssp CBCHHHHHHHHHHTSSCC-TTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEE
T ss_pred CCCHHHHHHHHHHHHHCC-CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEE
T ss_conf 989999999999998416-6884899967899745888367753200123355667899999999718998899986877
Q ss_pred CCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHHHH-HHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 777542113320002204674012------155442244215---6012256-554203884899978996526228
Q gi|254780588|r 201 GSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 201 ~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a~e-AAealklTa~DL~~lGiID~II~E 267 (317)
.+||..-...||.+++.+++.|.. +.|.+..+..+. -..++.+ .-..-.++|++++++|+||+|++.
T Consensus 118 ~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~iG~~~a~~l~ltg~~~~A~eA~~~Glv~~vv~~ 194 (275)
T 3hin_A 118 IGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAEGVVHGFSQYLIEN 194 (275)
T ss_dssp ETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEESS
T ss_pred EHHHHHHHHHCCCCHHHHHCHHHHHHCEEEECCCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHCCCCCEECCH
T ss_conf 42889999822613375523324221106225654888889987054677667640896869999983996876682
No 73
>3p85_A Enoyl-COA hydratase; ssgcid, mycobacerium avium, structural seattle structural genomics center for infectious disease,; HET: 1PE; 1.90A {Mycobacterium avium}
Probab=97.70 E-value=0.00016 Score=51.68 Aligned_cols=138 Identities=14% Similarity=0.179 Sum_probs=95.6
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
Q ss_conf 77683689999999999997-199489999535324-6778430027999999988862379988999961677775421
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMG 207 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a 207 (317)
..++++-.+.....++-+++ -.+-+|-|.-.++++ .|.+-.+.............+..+..|+|+.|-|-+.+||..-
T Consensus 47 Nal~~~~~~el~~al~~~~~d~~vr~vvltg~g~~F~aG~dl~~~~~~~~~~~~~~~~~~~~kPvIaav~G~a~GgG~~l 126 (270)
T 3p85_A 47 NALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKELGGSSALPDISPRWPALTKPVIGAINGAAVTGGLEL 126 (270)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC------CCCCCCCCCCSSCEEEEECSEEETHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEECCEEEHHHHHH
T ss_conf 99899999999999999975989169999799867246751454122113456899998689999999889755077999
Q ss_pred CCCCCCEEEECCCCEEE------ECHHHHH-HHHCC--CCHHHHH-HHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 13320002204674012------1554422-44215--6012256-554203884899978996526228
Q gi|254780588|r 208 IAAANFVYMLEHAIYSV------ISPEGAA-SILWR--DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 208 ~~~~d~v~m~~~s~ysv------isPEg~A-sILwk--d~~~a~e-AAealklTa~DL~~lGiID~II~E 267 (317)
...||.+++.+++.|+. +.|.+.. ..|.+ ...++.+ .-..-++++.+++++|+||+|+|.
T Consensus 127 al~~D~ria~~~a~f~~pe~~lGl~p~~g~~~~l~~~ig~~~a~~llltg~~~~a~eA~~~Glv~~vv~~ 196 (270)
T 3p85_A 127 ALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPH 196 (270)
T ss_dssp HHHSSEEEEETTCEEECCTTTTTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECG
T ss_pred HHHCCEEEECCCCEEECHHHHHCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCHHHHHHCCCEEEEECH
T ss_conf 8626758966887798856751877665753232001232021111003785878999877991297187
No 74
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=97.68 E-value=0.00016 Score=51.55 Aligned_cols=138 Identities=14% Similarity=0.179 Sum_probs=91.1
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCC----C---HHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 76836899999999999971-99489999535324-677843----0---027999999988862379988999961677
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAE----A---RGQGEAIARATEMCLKLQVPILSIIIGEGG 201 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE----~---~G~~~aia~~l~~~~~~~vP~i~vv~geg~ 201 (317)
.++++-.+-....++.+++- .+-+|-+.-.++++ .|.+-. . ......+.+.+..+..+.+|+|+.|-|-..
T Consensus 30 als~~~~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaai~G~a~ 109 (260)
T 1mj3_A 30 ALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYAL 109 (260)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECSEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEE
T ss_conf 99999999999999999858990799997799953278765653235314567889999998852599829999887561
Q ss_pred CCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCC---CCHHH-HHHHHHCCCCHHHHHHCCCCCEEECCC
Q ss_conf 77542113320002204674012------155442244215---60122-565542038848999789965262288
Q gi|254780588|r 202 SGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWR---DSSRA-AQAAIAMKIIATDLQDLSIIDGIIPEP 268 (317)
Q Consensus 202 sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwk---d~~~a-~eAAealklTa~DL~~lGiID~II~EP 268 (317)
+||..-...||.++|-+++.|+. +.|.++.+-.+. -..++ +-+-..-.++|++++++|+||+|++..
T Consensus 110 GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~ 186 (260)
T 1mj3_A 110 GGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVE 186 (260)
T ss_dssp THHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTT
T ss_pred HHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECHH
T ss_conf 99999999789999769988989501506586413999999984289999996538714778898789817872325
No 75
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.80A {Streptomyces avermitilis}
Probab=97.63 E-value=0.00063 Score=47.39 Aligned_cols=141 Identities=19% Similarity=0.173 Sum_probs=85.0
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECC-CCCC-CCCCCCH---HHH-----------HHHHHHHHHHH
Q ss_conf 442026776836899999999999971-99489999535-3246-7784300---279-----------99999988862
Q gi|254780588|r 124 RIKHNFGSPRPEGYRKAVRLMEMADRF-KIPVISFIDTA-GAYP-GVDAEAR---GQG-----------EAIARATEMCL 186 (317)
Q Consensus 124 ~~~~n~G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtp-Ga~~-g~~aE~~---G~~-----------~aia~~l~~~~ 186 (317)
|+.+| .++++-++-..+.++.++.- .+-+|-|.=.. .|+. |.+-.+. ... ..+...+..+.
T Consensus 26 rP~~N--al~~~~~~~L~~al~~~~~d~~vr~vVl~g~g~~ffs~G~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 103 (287)
T 3gkb_A 26 NPPVN--VIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVGELIR 103 (287)
T ss_dssp CTTTT--CBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHHTSCTTCCTTHHHHHHHH
T ss_pred CCCCC--CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89858--8999999999999999986899459999678988550032788765200103333210778899999999998
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCEEE-ECCCCEEE------ECHH-HHHHHHCC--CCHHHHH-HHHHCCCCHHHH
Q ss_conf 379988999961677775421133200022-04674012------1554-42244215--6012256-554203884899
Q gi|254780588|r 187 KLQVPILSIIIGEGGSGGAMGIAAANFVYM-LEHAIYSV------ISPE-GAASILWR--DSSRAAQ-AAIAMKIIATDL 255 (317)
Q Consensus 187 ~~~vP~i~vv~geg~sGGA~a~~~~d~v~m-~~~s~ysv------isPE-g~AsILwk--d~~~a~e-AAealklTa~DL 255 (317)
.+.+|+|+.|-|-+.+||..-...||.+++ -++++|+. +.|. |....|-+ -..++.+ +-..-.++|+++
T Consensus 104 ~~pkPvIaav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~llltg~~~~a~eA 183 (287)
T 3gkb_A 104 HQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAETA 183 (287)
T ss_dssp HCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHH
T ss_pred HCCCCEEEEECCCEEEECCHHCCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
T ss_conf 39998899957947860511210466343210100135741134658864689999997188889999865884468999
Q ss_pred HHCCCCCEEEC
Q ss_conf 97899652622
Q gi|254780588|r 256 QDLSIIDGIIP 266 (317)
Q Consensus 256 ~~lGiID~II~ 266 (317)
+++|+||+|+|
T Consensus 184 ~~~Glv~~vv~ 194 (287)
T 3gkb_A 184 ASYGWINRALP 194 (287)
T ss_dssp HHHTSSSEEEC
T ss_pred HHCCCCEEEEC
T ss_conf 98599049838
No 76
>1q52_A MENB; lyase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.14.1.3 PDB: 1q51_A 1rjm_A* 1rjn_A*
Probab=97.59 E-value=0.0015 Score=44.76 Aligned_cols=137 Identities=12% Similarity=0.180 Sum_probs=87.2
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEE------------CCCCCCCCCCC----------------CHHHHHHHHHH
Q ss_conf 76836899999999999971-994899995------------35324677843----------------00279999999
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFID------------TAGAYPGVDAE----------------ARGQGEAIARA 181 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvD------------tpGa~~g~~aE----------------~~G~~~aia~~ 181 (317)
.++++-++-....++.++.- .+-+|-|.= +.|++...-.+ .+.....+...
T Consensus 60 Al~~~m~~eL~~al~~~~~d~~vrvvVltG~~~~~~sgG~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (314)
T 1q52_A 60 AFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEV 139 (314)
T ss_dssp CCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC-----------------------------CHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999749997589995788766552102334767566531244433334201266788888999999
Q ss_pred HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCC-EEE------ECHHHH-HHHHCC--CCHHHHHH-HHHCCC
Q ss_conf 8886237998899996167777542113320002204674-012------155442-244215--60122565-542038
Q gi|254780588|r 182 TEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAI-YSV------ISPEGA-ASILWR--DSSRAAQA-AIAMKI 250 (317)
Q Consensus 182 l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~-ysv------isPEg~-AsILwk--d~~~a~eA-Aealkl 250 (317)
+..+..+..|+|+.|-|-..+||..-...||.+++.+++. |+. +.|.+. ...|.+ -..++.+. -..-++
T Consensus 140 ~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ias~~a~~f~~pe~~lGl~p~~g~~~~L~~~vG~~~A~~llltg~~i 219 (314)
T 1q52_A 140 QRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTY 219 (314)
T ss_dssp HHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCGGGGTCCCCSTTTHHHHHHHCHHHHHHHHHHCCEE
T ss_pred HHHHHHCCCCEEEEECCEEEECHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99998589988999837661021388761231121003777664440458788850699999985699999999858988
Q ss_pred CHHHHHHCCCCCEEECC
Q ss_conf 84899978996526228
Q gi|254780588|r 251 IATDLQDLSIIDGIIPE 267 (317)
Q Consensus 251 Ta~DL~~lGiID~II~E 267 (317)
+|+++++.|+||+|++.
T Consensus 220 ~a~eA~~~Glv~~vv~~ 236 (314)
T 1q52_A 220 TAEQMHQMGAVNAVAEH 236 (314)
T ss_dssp CHHHHHHHTSCSEEECG
T ss_pred CHHHHHCCCCEEEECCH
T ss_conf 88897307832796387
No 77
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.30A {Shewanella oneidensis mr-1}
Probab=97.54 E-value=0.0076 Score=39.69 Aligned_cols=161 Identities=17% Similarity=0.124 Sum_probs=98.2
Q ss_pred EEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC--CC-CCCCCCC----
Q ss_conf 9998875380089998458775023442026776836899999999999971994899995353--24-6778430----
Q gi|254780588|r 99 QIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAG--AY-PGVDAEA---- 171 (317)
Q Consensus 99 i~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpG--a~-~g~~aE~---- 171 (317)
.--+..-+|+.|++|-= +|+.. -..++++-++...+.++.++.-.---+-++...| +| .|-+--+
T Consensus 41 ~~~~~~~~~~~Vg~ItL-------NRP~~-lNAl~~~m~~~l~~~l~~~~~d~~v~~vVl~g~G~kaFcAG~Dl~~l~~~ 112 (407)
T 3ju1_A 41 FQTLATASGKLVGVVTL-------NVEKA-LNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHA 112 (407)
T ss_dssp EEEEECTTSCEEEEEEE-------CCGGG-TSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHH
T ss_pred EEEEEECCCCCEEEEEE-------CCCCC-CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCHHHHHHC
T ss_conf 89972037984899998-------17886-78989999999999999997498957999980799971078188988513
Q ss_pred ------------HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHH
Q ss_conf ------------02799999998886237998899996167777542113320002204674012------155442244
Q gi|254780588|r 172 ------------RGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASI 233 (317)
Q Consensus 172 ------------~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsI 233 (317)
+.......+....+.....|+|+.|-|-..+||.--...||.+++.+++.|+. +.|.+.++-
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~riate~a~f~~pe~~iGl~P~~G~s~ 192 (407)
T 3ju1_A 113 SVAAKGQVTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSY 192 (407)
T ss_dssp HHHHTSSCCHHHHHHHHHHHHHHHHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCEEECHHHCEEECCCCHHHH
T ss_conf 33333430158999999888999999855993899976702045520002456465589879832341454279811546
Q ss_pred HCCCC--HHH-HHHHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 21560--122-56554203884899978996526228
Q gi|254780588|r 234 LWRDS--SRA-AQAAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 234 Lwkd~--~~a-~eAAealklTa~DL~~lGiID~II~E 267 (317)
+.+-- ..+ .-+--.-+++|.|+++.|++|+|+|.
T Consensus 193 ~~~~~~~~~~~~l~ltG~~i~a~eA~~~Glv~~vv~~ 229 (407)
T 3ju1_A 193 FLNRMPGKMGLFLGLTAYHMNAADACYVGLADHYLNR 229 (407)
T ss_dssp HTTTSSTTHHHHHHHHCCCBCHHHHHHHTSCSEECCG
T ss_pred HHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCEEECCH
T ss_conf 7462352888898865897765789874974175386
No 78
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabolism, lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus HTA426}
Probab=97.53 E-value=0.002 Score=43.83 Aligned_cols=142 Identities=14% Similarity=0.143 Sum_probs=87.4
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEE-CCCCC-CCCCCC---------CHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 42026776836899999999999971-994899995-35324-677843---------0027999999988862379988
Q gi|254780588|r 125 IKHNFGSPRPEGYRKAVRLMEMADRF-KIPVISFID-TAGAY-PGVDAE---------ARGQGEAIARATEMCLKLQVPI 192 (317)
Q Consensus 125 ~~~n~G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvD-tpGa~-~g~~aE---------~~G~~~aia~~l~~~~~~~vP~ 192 (317)
+++| ..+++-++-....++.++.- .+-+|-+.- -+.++ .|.+-. ..-......+.+..+..+..|+
T Consensus 27 pk~N--al~~~m~~~l~~~l~~~~~d~~vr~vil~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpv 104 (265)
T 2ppy_A 27 NKSN--SYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVY 104 (265)
T ss_dssp STTC--CBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 9989--99999999999999999849996599996178960567852102101005678899998889999986089878
Q ss_pred EEEEECCCCCCCCCCCCCCCCEEE-ECCCCEEE------ECHHHHHHHHCC---CCHHHHH-HHHHCCCCHHHHHHCCCC
Q ss_conf 999961677775421133200022-04674012------155442244215---6012256-554203884899978996
Q gi|254780588|r 193 LSIIIGEGGSGGAMGIAAANFVYM-LEHAIYSV------ISPEGAASILWR---DSSRAAQ-AAIAMKIIATDLQDLSII 261 (317)
Q Consensus 193 i~vv~geg~sGGA~a~~~~d~v~m-~~~s~ysv------isPEg~AsILwk---d~~~a~e-AAealklTa~DL~~lGiI 261 (317)
|+.|-|-..+||..-...||.+++ -+.+.|+. +.|.++.+-++. ...++.+ +-..-.++|++.+++|+|
T Consensus 105 Iaav~G~a~GgG~~lal~~D~ri~~~~~a~~~~pe~~~Gl~p~~~~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv 184 (265)
T 2ppy_A 105 IACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGETITPQEALEIGLV 184 (265)
T ss_dssp EEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTSS
T ss_pred EEEECCEECCCCCEEECCCCEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHCCCE
T ss_conf 99981723368634410242689951542344720356778885689999998589999999975997789999986992
Q ss_pred CEEECCC
Q ss_conf 5262288
Q gi|254780588|r 262 DGIIPEP 268 (317)
Q Consensus 262 D~II~EP 268 (317)
|+|++..
T Consensus 185 ~~v~~~~ 191 (265)
T 2ppy_A 185 NRVFPQA 191 (265)
T ss_dssp SEEECGG
T ss_pred EEECCHH
T ss_conf 4634828
No 79
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=97.46 E-value=0.00058 Score=47.64 Aligned_cols=138 Identities=18% Similarity=0.164 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEC-CCCCC-CCCCC---------CHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 776836899999999999971-9948999953-53246-77843---------002799999998886237998899996
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDT-AGAYP-GVDAE---------ARGQGEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDt-pGa~~-g~~aE---------~~G~~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
..++++-++-....++.+++- .+-+|-+.-. ++++. |-.-. .........+.+..+..+..|+|+.|-
T Consensus 34 Nal~~~~~~el~~~l~~~~~d~~~~~vVl~g~g~~~F~~G~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIaav~ 113 (272)
T 1hzd_A 34 NSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAID 113 (272)
T ss_dssp TCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEES
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99999999999999999985999649999627887113551000110012034456677899999999978998999978
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHH-HHHHCC--CCHHHHHH-HHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 167777542113320002204674012------155442-244215--60122565-54203884899978996526228
Q gi|254780588|r 198 GEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGA-ASILWR--DSSRAAQA-AIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 198 geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~-AsILwk--d~~~a~eA-AealklTa~DL~~lGiID~II~E 267 (317)
|-+.+||..-...||.+++.+++.|+. +.|.+. ...|-+ ...++.+. -..-.++|++++++|+||+|++.
T Consensus 114 G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~lll~g~~i~a~eA~~~Glv~~vv~~ 193 (272)
T 1hzd_A 114 GLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQ 193 (272)
T ss_dssp EEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHHHHHHTSCSEEECC
T ss_pred CEECCCCCEEECCCCHHHHCCCCEEECCCCCEEECCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEECC
T ss_conf 80335775110030322306898897754265136752441043034439999878612884689999757972698486
No 80
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=97.41 E-value=0.0002 Score=50.97 Aligned_cols=163 Identities=9% Similarity=0.096 Sum_probs=98.6
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCC---------CC-HHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 76836899999999999971-99489999535324-67784---------30-027999999988862379988999961
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDA---------EA-RGQGEAIARATEMCLKLQVPILSIIIG 198 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~a---------E~-~G~~~aia~~l~~~~~~~vP~i~vv~g 198 (317)
..+++-.+-....++.+++- .+-+|-|--.++++ .|.+- +. +-....+......+....+|+|+.|-|
T Consensus 35 als~~~~~~l~~~l~~~~~d~~~~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIa~v~G 114 (258)
T 3lao_A 35 AFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQG 114 (258)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBCCCCTTCCCTTSCSSSCCCSCEEEEECS
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 98999999999999999739996599997799866158746652533303567766533348999987389988999818
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCEEEE------CHHHHHHHHCC---CCHHHHHH-HHHCCCCHHHHHHCCCCCEEECCC
Q ss_conf 677775421133200022046740121------55442244215---60122565-542038848999789965262288
Q gi|254780588|r 199 EGGSGGAMGIAAANFVYMLEHAIYSVI------SPEGAASILWR---DSSRAAQA-AIAMKIIATDLQDLSIIDGIIPEP 268 (317)
Q Consensus 199 eg~sGGA~a~~~~d~v~m~~~s~ysvi------sPEg~AsILwk---d~~~a~eA-AealklTa~DL~~lGiID~II~EP 268 (317)
...+||+.-...||.+++.++++|+.- .|.+.++.++. ...++.+. -..-.++|+++++.|+||+|++..
T Consensus 115 ~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~r~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~ 194 (258)
T 3lao_A 115 TCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDEFDADEALRMRLLTEVVEPG 194 (258)
T ss_dssp EEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTT
T ss_pred EEECCCCHHHHCCCHHHHHHCCEEECHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHCCCEEEEECCC
T ss_conf 26037644310335221301367716433007884200688888884678999884128805699997779920884820
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 98444898999999999999999998589989999999
Q gi|254780588|r 269 IGGAHRNPAQTISSVGEIISQFLSETSTYSETEIREHR 306 (317)
Q Consensus 269 ~GGAHrd~~~~~~~lk~~i~~~L~~L~~~~~~~Li~~R 306 (317)
+. .....+..+.+.+.++..+...+
T Consensus 195 ------~l-------~~~a~~~a~~l~~~~~~a~~~~k 219 (258)
T 3lao_A 195 ------EE-------LARALEYAERIARAAPLAVRAAL 219 (258)
T ss_dssp ------CH-------HHHHHHHHHHHHHSCHHHHHHHH
T ss_pred ------HH-------HHHHHHHHHHHHHCCHHHHHHHH
T ss_conf ------89-------99999999987625999999999
No 81
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, quercetin, structural genomics consortium, SGC, alternative splicing; HET: QUE; 1.50A {Homo sapiens}
Probab=97.35 E-value=0.0033 Score=42.24 Aligned_cols=138 Identities=14% Similarity=0.115 Sum_probs=87.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCC-CC-CCCCC---------CC---HHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 776836899999999999971-994899995353-24-67784---------30---02799999998886237998899
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAG-AY-PGVDA---------EA---RGQGEAIARATEMCLKLQVPILS 194 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpG-a~-~g~~a---------E~---~G~~~aia~~l~~~~~~~vP~i~ 194 (317)
..++++-.+-..+.++.++.- .+-+|-+.-+.| ++ .|.+- +. ..........+..+..+..|+|+
T Consensus 28 Nal~~~m~~eL~~~l~~~~~d~~v~~vvltga~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIa 107 (363)
T 3bpt_A 28 NALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVA 107 (363)
T ss_dssp TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 89999999999999999984999769999668998211781678774122332100367776776899999968998998
Q ss_pred EEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHH-HCCCC-HHH-HHHHHHCCCCHHHHHHCCCCCEEE
Q ss_conf 996167777542113320002204674012------155442244-21560-122-565542038848999789965262
Q gi|254780588|r 195 IIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASI-LWRDS-SRA-AQAAIAMKIIATDLQDLSIIDGII 265 (317)
Q Consensus 195 vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsI-Lwkd~-~~a-~eAAealklTa~DL~~lGiID~II 265 (317)
.|-|-..+||.--...||.+++.+++.|+. +.|.+.++. |.|=. ..+ .-+-..-+++|+++++.|+||+|+
T Consensus 108 av~G~a~GgG~~la~~~D~~ia~~~a~f~~pe~~~Gl~P~~g~~~~l~rl~g~~a~~l~ltg~~~~a~eA~~~Glv~~vv 187 (363)
T 3bpt_A 108 LIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFV 187 (363)
T ss_dssp EECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTTHHHHHHHHCCCEETHHHHHTTSCSEEC
T ss_pred ECCCCEEECCHHHHCCCEEEECCCCCEEECCHHCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEC
T ss_conf 06994735125552033131038974892413221468887602342103369999999848974399999859970863
Q ss_pred CC
Q ss_conf 28
Q gi|254780588|r 266 PE 267 (317)
Q Consensus 266 ~E 267 (317)
|.
T Consensus 188 ~~ 189 (363)
T 3bpt_A 188 DS 189 (363)
T ss_dssp CG
T ss_pred CH
T ss_conf 85
No 82
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=97.26 E-value=0.0045 Score=41.28 Aligned_cols=136 Identities=17% Similarity=0.144 Sum_probs=85.9
Q ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCCC------------HHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 77683689999999999997-199489999535324-6778430------------027999999988862379988999
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAEA------------RGQGEAIARATEMCLKLQVPILSI 195 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE~------------~G~~~aia~~l~~~~~~~vP~i~v 195 (317)
...+++-.+-....++-++. -.+-+|-|.-.+++| .|.+-.+ ........+.+..+.++.+|+|+.
T Consensus 30 Nal~~~~~~el~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~PvIAa 109 (715)
T 1wdk_A 30 NKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAA 109 (715)
T ss_dssp CBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 79899999999999999974889769999888997165809898963557886788876789999999998499989999
Q ss_pred EECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHH--------CC---CCHHHH-HHHHHCCCCHHHHHHCCCCCE
Q ss_conf 961677775421133200022046740121554422442--------15---601225-655420388489997899652
Q gi|254780588|r 196 IIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASIL--------WR---DSSRAA-QAAIAMKIIATDLQDLSIIDG 263 (317)
Q Consensus 196 v~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsIL--------wk---d~~~a~-eAAealklTa~DL~~lGiID~ 263 (317)
|-|-..+||.--...||.+++.+++.|+. ||----|. +- ...++. -.-..-.+++.+++++|+||+
T Consensus 110 i~G~a~GgG~elalacD~ria~~~a~f~~--pev~lGl~p~~gg~~~l~r~iG~~~a~~l~ltg~~~~a~eA~~~Glvd~ 187 (715)
T 1wdk_A 110 INGIALGGGLEMCLAADFRVMADSAKIGL--PEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDALKVSAVDA 187 (715)
T ss_dssp ECSCEETHHHHHHHTSSEEEEETTCEEEC--GGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSSSE
T ss_pred ECCHHHHHHHHHHHHCCEEEEECCCEEEC--HHHHHCCCCCCCCCEECHHHCCHHHHHHHHCCCCCCHHHHHHHCCCCCC
T ss_conf 78633299999999789999829989988--6776388888774455101024367888630233404999998599742
Q ss_pred EECC
Q ss_conf 6228
Q gi|254780588|r 264 IIPE 267 (317)
Q Consensus 264 II~E 267 (317)
|+|+
T Consensus 188 vv~~ 191 (715)
T 1wdk_A 188 VVTA 191 (715)
T ss_dssp EECG
T ss_pred CCCH
T ss_conf 4888
No 83
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=97.18 E-value=0.00095 Score=46.11 Aligned_cols=86 Identities=14% Similarity=0.223 Sum_probs=61.7
Q ss_pred HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHH-HHCC--CCHHHHH-HHHHCCCC
Q ss_conf 8886237998899996167777542113320002204674012------15544224-4215--6012256-55420388
Q gi|254780588|r 182 TEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAAS-ILWR--DSSRAAQ-AAIAMKII 251 (317)
Q Consensus 182 l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~As-ILwk--d~~~a~e-AAealklT 251 (317)
+..+..+.+|+|+.|-|-..+||..-...||.+++.+++.|+. +.|.++++ .|-| ...++.+ +-..-+++
T Consensus 133 ~~~~~~~~kP~IAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~ 212 (305)
T 3m6n_A 133 FHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYS 212 (305)
T ss_dssp HHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCHHHHHHHHHHCCEEE
T ss_pred HHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCC
T ss_conf 99975699989999887050899999998547705344313570430588988535899998606999999996589998
Q ss_pred HHHHHHCCCCCEEECC
Q ss_conf 4899978996526228
Q gi|254780588|r 252 ATDLQDLSIIDGIIPE 267 (317)
Q Consensus 252 a~DL~~lGiID~II~E 267 (317)
|+++++.|+||+|+|.
T Consensus 213 a~eA~~~Glv~~vv~~ 228 (305)
T 3m6n_A 213 AEQLLGMGLVDRVVPR 228 (305)
T ss_dssp HHHHHHHTSCSEEECT
T ss_pred HHHHHHCCCCEEEECH
T ss_conf 9999877993087185
No 84
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=97.13 E-value=0.0001 Score=53.01 Aligned_cols=136 Identities=18% Similarity=0.105 Sum_probs=85.6
Q ss_pred CCCHHHHHHHHHHHHHHHHC-CCCEEEEEE--------------CCCCCCC-----C----CCCCHHHHHHHHHHH----
Q ss_conf 76836899999999999971-994899995--------------3532467-----7----843002799999998----
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADRF-KIPVISFID--------------TAGAYPG-----V----DAEARGQGEAIARAT---- 182 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~f-~lPiv~lvD--------------tpGa~~g-----~----~aE~~G~~~aia~~l---- 182 (317)
..+++-++-....++.++.- .+=+|-|-= +.|++.. . +...+.....+.+.+
T Consensus 190 Als~~m~~eL~~al~~~~~D~~VrvVVLtGa~~~~~~~~gGr~FcAG~DL~el~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (440)
T 2np9_A 190 AEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGISLVDFLMRRELGYIHKLVRGVL 269 (440)
T ss_dssp CBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCCCTTTTHHHHHHTHHHHHHHCEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999629996499996888666657888877548199988616776421566654567889998876
Q ss_pred --------HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHHHCCC--CHHHHH-HH
Q ss_conf --------886237998899996167777542113320002204674012------1554422442156--012256-55
Q gi|254780588|r 183 --------EMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASILWRD--SSRAAQ-AA 245 (317)
Q Consensus 183 --------~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsILwkd--~~~a~e-AA 245 (317)
..+.++..|+|++|-|-..+||.--...||.+++.++++|+. |.|.+.+..|+|- ..++.+ .-
T Consensus 270 ~~~~~~~~~~~~~~~KPvIAaVnG~A~GGG~eLalacD~rIAae~A~F~lPe~~lGi~Pg~gs~~L~r~vG~~~A~ellL 349 (440)
T 2np9_A 270 TNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAANLRLGRFAGPRVSRQVIL 349 (440)
T ss_dssp CCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTTCCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCEEECCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCHHHHHHHHH
T ss_conf 55467999999848998899966845617650123755020030130258654451288702879999859999999997
Q ss_pred HHCCCCHHHHHHCCCCCEEEC
Q ss_conf 420388489997899652622
Q gi|254780588|r 246 IAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 246 ealklTa~DL~~lGiID~II~ 266 (317)
..-.++|+++++.|+||+|+|
T Consensus 350 tG~~isA~EA~~~GLV~eVVp 370 (440)
T 2np9_A 350 EGRRIWAKEPEARLLVDEVVE 370 (440)
T ss_dssp HCCCEETTSGGGGGTCSEEEC
T ss_pred CCCCCCHHHHHHCCCCEEECC
T ss_conf 499177999997698507768
No 85
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.10 E-value=0.0018 Score=44.07 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHCCC--CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 89999999999997199--4899995353246778430027999999988862379988999961677775421133200
Q gi|254780588|r 136 GYRKAVRLMEMADRFKI--PVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANF 213 (317)
Q Consensus 136 g~rKa~r~~~~A~~f~l--Piv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~ 213 (317)
|+....+.++-|.+-.- -||--||+||-.+ .+++.|.+.+..+....-|+|+.+-+-++|||.+.-..||+
T Consensus 323 ~~~~~~~~l~~a~~d~~vkavvLrInSpGGs~-------~as~~i~~~i~~~k~~~KPVv~~~~~~aASggY~ia~~ad~ 395 (593)
T 3bf0_A 323 GGDTTAAQIRDARLDPKVKAIVLRVNSPGGSV-------TASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANY 395 (593)
T ss_dssp EHHHHHHHHHHHHHCTTEEEEEEEEEEEEECH-------HHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHTTTTCSE
T ss_pred CCHHHHHHHHHHHCCCCCEEEEEEEECCCCCH-------HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCE
T ss_conf 61788999986650754217999997989857-------78999999999998549978999878664155576533674
Q ss_pred EEEECCCCEE-------------------------------------EECHHHHHHHH------C----------C--CC
Q ss_conf 0220467401-------------------------------------21554422442------1----------5--60
Q gi|254780588|r 214 VYMLEHAIYS-------------------------------------VISPEGAASIL------W----------R--DS 238 (317)
Q Consensus 214 v~m~~~s~ys-------------------------------------visPEg~AsIL------w----------k--d~ 238 (317)
++|-++++.. .++||.-+.+- | | +.
T Consensus 396 I~A~p~titGSIGV~~~~~~~~~~~~k~Gi~~~~v~~g~~~~~~~~~~~~~e~~~~~q~~~~~~y~~F~~~Va~~R~~~~ 475 (593)
T 3bf0_A 396 IVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTP 475 (593)
T ss_dssp EEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred EEECCCCEEEECCEEEECCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 78668651442220475156888888679536665435567678666799899999999999999999999986369996
Q ss_pred HHHHHHHHHCCCCHHHHHHCCCCCEEE
Q ss_conf 122565542038848999789965262
Q gi|254780588|r 239 SRAAQAAIAMKIIATDLQDLSIIDGII 265 (317)
Q Consensus 239 ~~a~eAAealklTa~DL~~lGiID~II 265 (317)
+...+.|..--.|+.+.+++|+||+|-
T Consensus 476 ~~v~~ia~Grv~tg~~A~~~GLVD~iG 502 (593)
T 3bf0_A 476 EQIDKIAQGHVWTGQDAKANGLVDSLG 502 (593)
T ss_dssp HHHHTTCTTCEEEHHHHHHHTSCSEEC
T ss_pred HHHHHHCCCCEEEHHHHHHCCCCCCCC
T ss_conf 787875587588789998869975459
No 86
>2x58_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, lyase, isomerase, peroxisome; HET: ADP COA; 2.80A {Rattus norvegicus}
Probab=97.06 E-value=0.0041 Score=41.61 Aligned_cols=138 Identities=20% Similarity=0.232 Sum_probs=87.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCC-CCCCCC---CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 776836899999999999971-99489999535324-677843---0027999999988862379988999961677775
Q gi|254780588|r 130 GSPRPEGYRKAVRLMEMADRF-KIPVISFIDTAGAY-PGVDAE---ARGQGEAIARATEMCLKLQVPILSIIIGEGGSGG 204 (317)
Q Consensus 130 G~~~p~g~rKa~r~~~~A~~f-~lPiv~lvDtpGa~-~g~~aE---~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGG 204 (317)
...+++-.+-....++.++.- .+=+|-|.-.++.| .|.+-. .......+...+..+.++..|+|+.|-|-+.+||
T Consensus 27 Nal~~~~~~~l~~~l~~~~~d~~v~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG 106 (727)
T 2x58_A 27 NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGG 106 (727)
T ss_dssp TCBCHHHHHHHHHHHHHHHSCTTCCEEEEEESTTCSBCCBCGGGCSSSCSCSHHHHHHHHHHTCSSCEEEEECSEEETHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
T ss_conf 78999999999999999864899769999898997556808575653590579999999999499989999884532999
Q ss_pred CCCCCCCCCEEEECCCCEEE------ECHHHHHHH-HCC--CCHHH-HHHHHHCCCCHHHHHHCCCCCEEECC
Q ss_conf 42113320002204674012------155442244-215--60122-56554203884899978996526228
Q gi|254780588|r 205 AMGIAAANFVYMLEHAIYSV------ISPEGAASI-LWR--DSSRA-AQAAIAMKIIATDLQDLSIIDGIIPE 267 (317)
Q Consensus 205 A~a~~~~d~v~m~~~s~ysv------isPEg~AsI-Lwk--d~~~a-~eAAealklTa~DL~~lGiID~II~E 267 (317)
.--...||..++.+++.|+. |.|.++.+- |.| ...++ +-.-..-.++|.+.+++|+||.|.+.
T Consensus 107 ~elalacD~ria~~~a~~g~pev~lGl~p~~ggt~~l~r~iG~~~a~~l~l~g~~~~a~~A~~~Glvd~v~~~ 179 (727)
T 2x58_A 107 LELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKS 179 (727)
T ss_dssp HHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCEEEHHHHHTTTSCSEEESS
T ss_pred HHHHHHCCEEEECCCCEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCEECCC
T ss_conf 9999965989975997998830051618861699999885257789998753787878999865997176475
No 87
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.90 E-value=0.0016 Score=44.48 Aligned_cols=137 Identities=18% Similarity=0.157 Sum_probs=86.2
Q ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEECCCCC-CCCCCCC------------HHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 7683689999999999997-199489999535324-6778430------------0279999999888623799889999
Q gi|254780588|r 131 SPRPEGYRKAVRLMEMADR-FKIPVISFIDTAGAY-PGVDAEA------------RGQGEAIARATEMCLKLQVPILSII 196 (317)
Q Consensus 131 ~~~p~g~rKa~r~~~~A~~-f~lPiv~lvDtpGa~-~g~~aE~------------~G~~~aia~~l~~~~~~~vP~i~vv 196 (317)
.++++-.+-....++.++. -.+-+|-|.-.++.| .|.+-.+ ......+...+..+..+.+|+|+.|
T Consensus 30 al~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav 109 (725)
T 2wtb_A 30 SLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITDLLEAARKPSVAAI 109 (725)
T ss_dssp CCCHHHHHHHHHHHHHHTTCTTCCEEEEEESSSCCBCSSCC------------CCSSSHHHHHCCCCCCCTSSSCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 79999999999999999658997699998889980307374747523467766788888899999999981999899998
Q ss_pred ECCCCCCCCCCCCCCCCEEEECCCCEEE------ECHHHHHHH-HCC--CCHHHHH-HHHHCCCCHHHHHHCCCCCEEEC
Q ss_conf 6167777542113320002204674012------155442244-215--6012256-55420388489997899652622
Q gi|254780588|r 197 IGEGGSGGAMGIAAANFVYMLEHAIYSV------ISPEGAASI-LWR--DSSRAAQ-AAIAMKIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 197 ~geg~sGGA~a~~~~d~v~m~~~s~ysv------isPEg~AsI-Lwk--d~~~a~e-AAealklTa~DL~~lGiID~II~ 266 (317)
-|-+.+||.--...||.+++.+++.|.. +.|.+..+- |-| ...++.+ +-..-.++|+++++.|+||+|++
T Consensus 110 ~G~a~GGG~elalacD~ria~~~a~fg~PEv~lGl~P~~gg~~~L~r~iG~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~ 189 (725)
T 2wtb_A 110 DGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVP 189 (725)
T ss_dssp CSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEECC
T ss_pred CCEEEHHHHHHHHHCCEEEEECCCEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECC
T ss_conf 87350899999996898997199799880353084787114578888745788999987267754566530554024325
Q ss_pred C
Q ss_conf 8
Q gi|254780588|r 267 E 267 (317)
Q Consensus 267 E 267 (317)
.
T Consensus 190 ~ 190 (725)
T 2wtb_A 190 P 190 (725)
T ss_dssp T
T ss_pred C
T ss_conf 3
No 88
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=96.29 E-value=0.013 Score=38.03 Aligned_cols=83 Identities=16% Similarity=0.224 Sum_probs=54.4
Q ss_pred HHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHH-----------HHHHCC---CCHHHHH-HHHHC
Q ss_conf 86237998899996167777542113320002204674012155442-----------244215---6012256-55420
Q gi|254780588|r 184 MCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGA-----------ASILWR---DSSRAAQ-AAIAM 248 (317)
Q Consensus 184 ~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~-----------AsILwk---d~~~a~e-AAeal 248 (317)
.+....+|+|+.|-|-+.+||.--...||.+++..+.-.++--||-. ...+.+ ...++.+ +...-
T Consensus 124 ~~~~~~kPvIAAVnG~A~GGG~eLALaCD~rIavad~~a~~~lPEv~~lGl~PG~ggt~R~~l~r~VG~a~A~ellltGe 203 (556)
T 2w3p_A 124 SSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVE 203 (556)
T ss_dssp HHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTTHHHHHHHTSCCCHHHHHHHTTCSS
T ss_pred HHHHCCCCEEEEECCEEEECCCHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99838998999975858661206440657203043444200264211367789743425666664512999999998299
Q ss_pred CCCHHHHHHCCCCCEEEC
Q ss_conf 388489997899652622
Q gi|254780588|r 249 KIIATDLQDLSIIDGIIP 266 (317)
Q Consensus 249 klTa~DL~~lGiID~II~ 266 (317)
+++|+++++.|+||+|+|
T Consensus 204 ~i~AeeA~~~GLVd~VVp 221 (556)
T 2w3p_A 204 GVRGERAKAWRLVDEVVK 221 (556)
T ss_dssp CEEHHHHHHTTSCSEEEC
T ss_pred CCCHHHHHHCCCCCEECC
T ss_conf 747999997697117728
No 89
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=80.23 E-value=1.9 Score=22.72 Aligned_cols=45 Identities=29% Similarity=0.584 Sum_probs=38.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 97531455789999999999997422366677699999999999999999
Q gi|254780588|r 1 MRHYLDFEEPISDLEAKIHELKKLSREDINEDFSEEIRELEAMVCKTLSE 50 (317)
Q Consensus 1 M~~yLdFEkpI~eLe~kI~eL~~~~~~~~~~~~~~ei~~Le~k~~~~~~~ 50 (317)
|..||+.-+-+..-|.+|.+|-.++. +.++|+..+|++++.+..+
T Consensus 12 ~qEylevK~AL~aSEakIQqLmkvN~-----~ls~Elr~mQ~~~~~Lq~E 56 (63)
T 2w6a_A 12 LQEYLELKKALATSEAKVQQLMKVNS-----SLSDELRKLQREIHKLQAE 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998743999999999978-----6769999999999999977
No 90
>1g7s_A Translation initiation factor IF2/EIF5B; translational GTPase; HET: GDP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: b.43.3.1 b.43.3.1 c.20.1.1 c.37.1.8 PDB: 1g7r_A* 1g7t_A*
Probab=74.71 E-value=3.2 Score=21.12 Aligned_cols=62 Identities=15% Similarity=0.312 Sum_probs=33.6
Q ss_pred EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE---E
Q ss_conf 0672275334789729999887538008999845877502344202677683689999999999997199489999---5
Q gi|254780588|r 83 FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFI---D 159 (317)
Q Consensus 83 f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lv---D 159 (317)
|+-.-|...|.. -+..|. +.-+-.++||.-+.|.... ..+.+++|.++++|+|.+| |
T Consensus 74 ~iDTPGH~~F~~--~~~rg~-~~~D~ailVV~A~~Gv~~Q-----------------T~e~i~~a~~~~vp~Iv~INKiD 133 (594)
T 1g7s_A 74 FIDTPGHEAFTT--LRKRGG-ALADLAILIVDINEGFKPQ-----------------TQEALNILRMYRTPFVVAANKID 133 (594)
T ss_dssp EECCCTTSCCTT--SBCSSS-BSCSEEEEEEETTTCCCHH-----------------HHHHHHHHHHTTCCEEEEEECGG
T ss_pred EEECCCHHHHHH--HHHHHH-HHCCEEEEEEECCCCCCHH-----------------HHHHHHHHHHCCCCEEEEEECCC
T ss_conf 998987699999--999999-7688999999888896389-----------------99999999984998799998965
Q ss_pred CCCCC
Q ss_conf 35324
Q gi|254780588|r 160 TAGAY 164 (317)
Q Consensus 160 tpGa~ 164 (317)
-+++.
T Consensus 134 ~~~~~ 138 (594)
T 1g7s_A 134 RIHGW 138 (594)
T ss_dssp GSTTC
T ss_pred CCCCC
T ss_conf 78842
No 91
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=71.76 E-value=2.8 Score=21.48 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=18.5
Q ss_pred HCCCCE-EEEEECCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 719948-9999535324677843002799999998
Q gi|254780588|r 149 RFKIPV-ISFIDTAGAYPGVDAEARGQGEAIARAT 182 (317)
Q Consensus 149 ~f~lPi-v~lvDtpGa~~g~~aE~~G~~~aia~~l 182 (317)
..++++ +++|||||+......+. ....|+..+
T Consensus 83 ~~~~~~~l~iiDTPG~~d~~~~~~--~~~~i~~~i 115 (418)
T 2qag_C 83 EGGVQLLLTIVDTPGFGDAVDNSN--CWQPVIDYI 115 (418)
T ss_dssp ----CEEEEEEECC-------------CHHHHHHH
T ss_pred CCCCEEEEEEEECCCCCCCCCCHH--HHHHHHHHH
T ss_conf 178231179998989765446366--799999999
No 92
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=69.75 E-value=6 Score=19.15 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=51.0
Q ss_pred HHHCCCCC-CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 42026776-83689999999999997199489999535324677843002799999998886237998899996167777
Q gi|254780588|r 125 IKHNFGSP-RPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSG 203 (317)
Q Consensus 125 ~~~n~G~~-~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sG 203 (317)
++-++|+. -|.+|-+.+| ++|+++++++|.=-=..|+.- |...+. +... -+|-| +++|+|-+|
T Consensus 208 i~g~~G~~~~~~~yl~~l~--~lc~k~gillI~DEV~tG~~~-------g~~~~~-----~~~g-v~PDi-v~~gK~l~g 271 (427)
T 3fq8_A 208 IVGNSGFIVPDAGFLEGLR--EITLEHDALLVFDEVITGFRI-------AYGGVQ-----EKFG-VTPDL-TTLGKIIGG 271 (427)
T ss_dssp SBCTTSCBCCCTTHHHHHH--HHHHHTTCEEEEECTTTBTTT-------BTTHHH-----HHTT-CCCSE-EEECGGGGT
T ss_pred CCCCCCCEECCHHHHHHHH--HHHHHCEEEEEEECCCCCCCC-------CCCCHH-----HHHC-CCCCE-EEEHHHHCC
T ss_conf 4788886409999999999--998747289997011105560-------333057-----8729-99677-533033109
Q ss_pred CCCCCCC---CCCEEE-E-CC------CCEEEECHHHHHHHHC
Q ss_conf 5421133---200022-0-46------7401215544224421
Q gi|254780588|r 204 GAMGIAA---ANFVYM-L-EH------AIYSVISPEGAASILW 235 (317)
Q Consensus 204 GA~a~~~---~d~v~m-~-~~------s~ysvisPEg~AsILw 235 (317)
| +.++. .+.++- + ++ +.| --+|-+||+.+.
T Consensus 272 G-~p~~av~~~~~i~~~~~~~~~~~~~~T~-~g~p~~~aaa~a 312 (427)
T 3fq8_A 272 G-LPVGAYGGKREIMQLVAPAGPMYQAGTL-SGNPLAMTAGIK 312 (427)
T ss_dssp T-SSCEEEEECHHHHTTBTTTSSBCCCCTT-TTCHHHHHHHHH
T ss_pred C-CCCEEEEEHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHH
T ss_conf 9-8825567739999974403776634467-887488888888
No 93
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=63.71 E-value=4.1 Score=20.31 Aligned_cols=19 Identities=21% Similarity=0.373 Sum_probs=8.7
Q ss_pred HHHHHHHCCCCEEEEEECC
Q ss_conf 9999997199489999535
Q gi|254780588|r 143 LMEMADRFKIPVISFIDTA 161 (317)
Q Consensus 143 ~~~~A~~f~lPiv~lvDtp 161 (317)
.++-|.+.++|+|.|+||-
T Consensus 166 AI~EA~kl~IPvIgivDTn 184 (253)
T 3bch_A 166 PLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp HHHHHHHTTCCEEEEECTT
T ss_pred HHHHHHHCCCCEEEEECCC
T ss_conf 7677876499779872489
No 94
>3cf4_G Acetyl-COA decarbonylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri}
Probab=62.13 E-value=8.3 Score=18.16 Aligned_cols=44 Identities=16% Similarity=0.303 Sum_probs=29.2
Q ss_pred CCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 3800899984587750234420267768368999999999999719948999953532467
Q gi|254780588|r 106 HGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPG 166 (317)
Q Consensus 106 ~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g 166 (317)
.-+||+++|.. ....+. .-.+.++++++++|+++--...|.++.
T Consensus 34 akrP~ii~G~g--------------~~~~~~---~~~l~~~~~~~~iPv~tt~~~kg~~~e 77 (170)
T 3cf4_G 34 AKRPLLMVGTL--------------ALDPEL---LDRVVKISKAANIPIAATGSSLAVLAD 77 (170)
T ss_dssp CSSEEEEECST--------------TCCHHH---HHHHHHHHHHHTCCEEECTTTHHHHTT
T ss_pred CCCCEEEECCC--------------CCCHHH---HHHHHHHHHHHCCCEEECCCCCCCCCC
T ss_conf 68989994665--------------250669---999999999859998987000576775
No 95
>3ofo_B 30S ribosomal protein S2; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_B* 2wwl_B 3ofp_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B 1vs5_B 3i1o_B 3i1q_B 3i1s_B 3i1z_B 3i21_B 3kc4_B 3or9_B 3ora_B 2qal_B* 1p87_B 2aw7_B 2avy_B ...
Probab=60.39 E-value=3.9 Score=20.44 Aligned_cols=21 Identities=29% Similarity=0.515 Sum_probs=18.3
Q ss_pred HHHHHHHHCCCCEEEEEECCC
Q ss_conf 999999971994899995353
Q gi|254780588|r 142 RLMEMADRFKIPVISFIDTAG 162 (317)
Q Consensus 142 r~~~~A~~f~lPiv~lvDtpG 162 (317)
-+++-|.+.++|+|.++||--
T Consensus 163 ~ai~Ea~~l~IPvI~ivDTn~ 183 (218)
T 3ofo_B 163 IAIKEANNLGIPVFAIVDTNS 183 (218)
T ss_dssp HHHHHHHHTTCCEEEECCTTS
T ss_pred HHHHHHHHCCCCEEEEEECCC
T ss_conf 999999985997799850798
No 96
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=59.19 E-value=5.5 Score=19.40 Aligned_cols=16 Identities=6% Similarity=0.260 Sum_probs=9.1
Q ss_pred HHHHHCCCCCEEEEEE
Q ss_conf 8886237998899996
Q gi|254780588|r 182 TEMCLKLQVPILSIII 197 (317)
Q Consensus 182 l~~~~~~~vP~i~vv~ 197 (317)
+.+.+.+.+|+|++|=
T Consensus 131 i~Ea~~l~IP~I~ivD 146 (208)
T 1vi6_A 131 VSEATAVGIPVVALCD 146 (208)
T ss_dssp HHHHHHTTCCEEEEEC
T ss_pred HHHHHHCCCCEEEEEC
T ss_conf 9999980996588724
No 97
>2ywe_A GTP-binding protein LEPA; G domain, beta-barrel, ferredoxin-like domain, structural genomics, NPPSFA; 2.05A {Aquifex aeolicus VF5} PDB: 2ywf_A* 2ywg_A* 2ywh_A*
Probab=56.95 E-value=7.1 Score=18.61 Aligned_cols=24 Identities=25% Similarity=0.138 Sum_probs=14.5
Q ss_pred HHHHHHHHHCCCCEEEEE---ECCCCC
Q ss_conf 999999997199489999---535324
Q gi|254780588|r 141 VRLMEMADRFKIPVISFI---DTAGAY 164 (317)
Q Consensus 141 ~r~~~~A~~f~lPiv~lv---DtpGa~ 164 (317)
.+...+|.+.++|+|.+| |-|+|.
T Consensus 115 ~~~~~~a~~~~l~~i~viNKiD~~~a~ 141 (600)
T 2ywe_A 115 VANFWKAVEQDLVIIPVINKIDLPSAD 141 (600)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTSTTCC
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 999999998799769999897588779
No 98
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=55.79 E-value=10 Score=17.56 Aligned_cols=12 Identities=42% Similarity=0.750 Sum_probs=5.9
Q ss_pred EEEEECCCCCCC
Q ss_conf 999953532467
Q gi|254780588|r 155 ISFIDTAGAYPG 166 (317)
Q Consensus 155 v~lvDtpGa~~g 166 (317)
|+||||||..-+
T Consensus 89 i~vIDTPGl~d~ 100 (270)
T 1h65_A 89 LNIIDTPGLIEG 100 (270)
T ss_dssp EEEEECCCSEET
T ss_pred EEEEECCCCCCC
T ss_conf 999867775576
No 99
>3jyv_B 40S ribosomal protein S0(A); eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus} PDB: 1s1h_B
Probab=55.27 E-value=7 Score=18.66 Aligned_cols=21 Identities=29% Similarity=0.461 Sum_probs=17.9
Q ss_pred HHHHHHHHCCCCEEEEEECCC
Q ss_conf 999999971994899995353
Q gi|254780588|r 142 RLMEMADRFKIPVISFIDTAG 162 (317)
Q Consensus 142 r~~~~A~~f~lPiv~lvDtpG 162 (317)
.+++-|.+.++|+|.++||--
T Consensus 123 ~ai~EA~~l~IPvI~ivDTn~ 143 (193)
T 3jyv_B 123 QAIKEASYVNIPVIALTDLDS 143 (193)
T ss_dssp HHHHHHHHTTCCEEEEECTTC
T ss_pred HHHHHHHHCCCCEEEEECCCC
T ss_conf 666778756998787506899
No 100
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=54.84 E-value=6.7 Score=18.78 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=18.7
Q ss_pred HHHHHHHHHCCCCEEEEEECCC
Q ss_conf 9999999971994899995353
Q gi|254780588|r 141 VRLMEMADRFKIPVISFIDTAG 162 (317)
Q Consensus 141 ~r~~~~A~~f~lPiv~lvDtpG 162 (317)
...++-|.+.+||+|.|+||-.
T Consensus 131 ~~av~Ea~~~~IPviai~DTn~ 152 (295)
T 2zkq_b 131 HQPLTEASYVNLPTIALCNTDS 152 (295)
T ss_dssp HHHHHHHHHHTCCEEEEECTTC
T ss_pred HHHHHHHHHCCCCEEEEECCCC
T ss_conf 4889999874999899815899
No 101
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=54.24 E-value=10 Score=17.42 Aligned_cols=55 Identities=22% Similarity=0.436 Sum_probs=35.7
Q ss_pred CCCE-EEEEEECCCCCCHHH--------------HHHCCCCC--CH----HHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 3800-899984587750234--------------42026776--83----68999999999999719948999953
Q gi|254780588|r 106 HGQP-VAIIGQEKGSDTKSR--------------IKHNFGSP--RP----EGYRKAVRLMEMADRFKIPVISFIDT 160 (317)
Q Consensus 106 ~g~~-v~vig~~kG~~~~~~--------------~~~n~G~~--~p----~g~rKa~r~~~~A~~f~lPiv~lvDt 160 (317)
.+.| |+++.+.-|.++... ....+|++ .| |.|.-++...++|+++++||+.+.|+
T Consensus 112 ~~~p~v~~~v~r~gp~~g~~t~~~q~Dl~~~~~~~~gd~~~~vl~P~s~QEa~d~~~~Af~lAE~~~~PViv~~D~ 187 (395)
T 1yd7_A 112 TETPVVIVDVQRSGPSTGQPTLPAQGDIMQAIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLSEKYRTPVILLTDA 187 (395)
T ss_dssp CCCCEEEEEEC--------------------------CCCCEEECCCSHHHHHHHHHHHHHHHHHHTSEEEEEECH
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 3787369984578676779886647789997655314678455679998999999999875368757870898402
No 102
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=53.38 E-value=3.8 Score=20.51 Aligned_cols=22 Identities=32% Similarity=0.434 Sum_probs=18.4
Q ss_pred HHHHHHHHHCCCCEEEEEECCC
Q ss_conf 9999999971994899995353
Q gi|254780588|r 141 VRLMEMADRFKIPVISFIDTAG 162 (317)
Q Consensus 141 ~r~~~~A~~f~lPiv~lvDtpG 162 (317)
.-+++-|.+.++|+|.++||-.
T Consensus 171 ~~AI~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 171 AIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp HHHHHHHHHTTCCCEECCCTTS
T ss_pred HHHHHHHHHHCCCEEEEECCCC
T ss_conf 8899999985895577613898
No 103
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=52.63 E-value=4.4 Score=20.07 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=60.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH---HHHHHHHHHHHHHHHHHHCC-------CCHHHHHHHHHCCHHHHH
Q ss_conf 53145578999999999999742236667769---99999999999999997426-------999998887635002237
Q gi|254780588|r 3 HYLDFEEPISDLEAKIHELKKLSREDINEDFS---EEIRELEAMVCKTLSEIYSK-------LTPWQKTQVSRHPNRPHY 72 (317)
Q Consensus 3 ~yLdFEkpI~eLe~kI~eL~~~~~~~~~~~~~---~ei~~Le~k~~~~~~~iy~~-------Lt~w~~v~~aRh~~Rp~~ 72 (317)
|.+|.++-+.-|+.-..-+..+...+....+- .+...+-++..+....-|-+ ||-|..++-. -+.
T Consensus 39 ~IIdl~~T~~~L~~A~~~l~~i~~~~~~iLfVgtk~~~~~~v~~~a~~~~~~yv~~rW~gG~LTN~~~i~~~-----i~~ 113 (231)
T 3bbn_B 39 HIINLTRTARFLSEACDLVFDASSRGKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGMLTNWSTTETR-----LHK 113 (231)
T ss_dssp EEECHHHHHHHTHHHHHHSHHHHTTTCCEEEECCCTTTHHHHHHHHHHHTCEECCSSCCSCSSSCHHHHHHH-----HHH
T ss_pred EEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH-----HHH
T ss_conf 488599999999999999999983798059996648799999999999699031672158865247888667-----765
Q ss_pred HHHHHHCCCC-EEE--------------ECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHH
Q ss_conf 9998622545-067--------------2275334789729999887538008999845877502344202677683689
Q gi|254780588|r 73 IDYINSLFTH-FIS--------------LAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGY 137 (317)
Q Consensus 73 ~dyi~~l~~d-f~e--------------l~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~ 137 (317)
...++...+. +.. .+-.+.+ .|+......|=+||-.+ |.
T Consensus 114 ~~~l~~~~~~~~~~~~~kk~~~~~~~~~~kl~k~~-------~Gi~~m~~~Pd~viv~d-----------------~~-- 167 (231)
T 3bbn_B 114 FRDLRMEQTAGRLARLPKRDAAVVKRQLSHLQTYL-------GGIKYMTGLPDIVIIVD-----------------QQ-- 167 (231)
T ss_dssp HHHHHHSTTSTTTTTSCHHHHHHHHHHHHHHTTST-------TSTTSCCSCCSEEEESC-----------------TT--
T ss_pred HHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHC-------CCCCHHHCCCCEEEECC-----------------CC--
T ss_conf 89998886215231188889988768999998731-------46310312997798528-----------------63--
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 9999999999971994899995353
Q gi|254780588|r 138 RKAVRLMEMADRFKIPVISFIDTAG 162 (317)
Q Consensus 138 rKa~r~~~~A~~f~lPiv~lvDtpG 162 (317)
+-.-+++-|.+.++|+|.++||--
T Consensus 168 -~~~~ai~Ea~~l~IPvI~ivDtn~ 191 (231)
T 3bbn_B 168 -EEYTALRECITLGIPTICLIDTNC 191 (231)
T ss_dssp -TTHHHHHHHHTTTCCEEECCCSSS
T ss_pred -CCHHHHHHHHHCCCCEEEEECCCC
T ss_conf -227999999973998788743898
No 104
>3cb4_D GTP-binding protein LEPA; GTPase, OB-fold, membrane, nucleotide-binding, periplasm, translation; 2.80A {Escherichia coli K12} PDB: 3deg_C*
Probab=52.38 E-value=9.1 Score=17.87 Aligned_cols=26 Identities=19% Similarity=0.258 Sum_probs=17.8
Q ss_pred HHHHHHHHHHCCCCEEEEE---ECCCCCC
Q ss_conf 9999999997199489999---5353246
Q gi|254780588|r 140 AVRLMEMADRFKIPVISFI---DTAGAYP 165 (317)
Q Consensus 140 a~r~~~~A~~f~lPiv~lv---DtpGa~~ 165 (317)
....+.+|.+.++|+|-+| |-|+|.+
T Consensus 112 T~~~~~~A~~~~l~~I~vINKiD~~~A~~ 140 (599)
T 3cb4_D 112 TLANCYTAMEMDLEVVPVLNKIDLPAADP 140 (599)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTTSTTCCH
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCH
T ss_conf 39999999987997799998976887799
No 105
>1ytl_A Acetyl-COA decarbonylase/synthase complex epsilon subunit 2; structural genomics, protein structure initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=49.08 E-value=13 Score=16.71 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=22.7
Q ss_pred CCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 380089998458775023442026776836899999999999971994899995
Q gi|254780588|r 106 HGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFID 159 (317)
Q Consensus 106 ~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvD 159 (317)
.-+||+++|+ |.. +....+.++++++++||+|-.+
T Consensus 35 AkrPvii~G~--------------g~~-----~~~~e~~~~~~~~~iPv~tT~~ 69 (174)
T 1ytl_A 35 AKRPLLIVGP--------------DMT-----DEMFERVKKFVEKDITVVATGS 69 (174)
T ss_dssp CSSEEEEECS--------------CCC-----HHHHHHHHHHHTSSSEEEEETT
T ss_pred CCCCEEEECC--------------CHH-----HHHHHHHHHHHHHCCCEEECCC
T ss_conf 6892899674--------------540-----8999999999986969996266
No 106
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=47.94 E-value=14 Score=16.59 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=37.8
Q ss_pred ECCCEEEEEEECCCCCCH---HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf 538008999845877502---34420267768368999999999999719948999953532
Q gi|254780588|r 105 FHGQPVAIIGQEKGSDTK---SRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGA 163 (317)
Q Consensus 105 i~g~~v~vig~~kG~~~~---~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa 163 (317)
+++.|+|.-.++-=.+.. .-..-|.||++++-........+.|.+.++||| +|-=|.
T Consensus 39 ~GasP~M~~~~~E~~~~~~~a~al~IniG~l~~~~~~a~~~a~~~a~~~~~PvV--LDPV~v 98 (273)
T 3dzv_A 39 IDAKPIMADDPREFPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTV--VDLVGY 98 (273)
T ss_dssp TTCEEECCCCGGGHHHHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEE--EECTTT
T ss_pred CCCCHHHCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEE--ECCCCC
T ss_conf 089634049988999998566956997698997999999999999886299999--887356
No 107
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX research center for structural genomics, NYSGXRC, structural genomics, PSI; 1.90A {Escherichia coli K12} SCOP: c.1.9.12
Probab=46.82 E-value=14 Score=16.47 Aligned_cols=133 Identities=15% Similarity=0.258 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEC
Q ss_conf 99999999997199489999535324677843002799999998886237998899996167777542113320002204
Q gi|254780588|r 139 KAVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLE 218 (317)
Q Consensus 139 Ka~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~ 218 (317)
.-.+.+++|.++++||+ +-+.+|. ..+...+.. ...|...+|+ -+.||+.--. .+. ++
T Consensus 112 ~f~~ql~lA~~~~~Pv~--iH~r~a~-----------~~~~~il~~---~~~~~~~~i~-H~fsG~~~~a---~~~--l~ 169 (265)
T 1yix_A 112 SFIHHIQIGRELNKPVI--VHTRDAR-----------ADTLAILRE---EKVTDCGGVL-HCFTEDRETA---GKL--LD 169 (265)
T ss_dssp HHHHHHHHHHHHTCCEE--EEEESCH-----------HHHHHHHHH---TTGGGTCEEE-TTCCSCHHHH---HHH--HT
T ss_pred HHHHHHHHHHHCCCCCC--CCCCCHH-----------HHHHHHHHH---HCCCCCCEEE-EEECCCHHHH---HHH--HH
T ss_conf 99999999987499841--1331158-----------999999998---3478865389-8406999999---999--98
Q ss_pred CCCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEE---------CCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 67401215544224421560122565542038848999789965262---------288984448989999999999999
Q gi|254780588|r 219 HAIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDLSIIDGII---------PEPIGGAHRNPAQTISSVGEIISQ 289 (317)
Q Consensus 219 ~s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~lGiID~II---------~EP~GGAHrd~~~~~~~lk~~i~~ 289 (317)
.++|--+++ .+.++.+.+..+++..+.+ |.++ |.|..|....|.. +.. +.+
T Consensus 170 ~g~~isi~g----~~~~~~~~~~~~~v~~iPl-----------drlLlETD~P~~~p~~~rg~~n~P~~----l~~-v~~ 229 (265)
T 1yix_A 170 LGFYISFSG----IVTFRNAEQLRDAARYVPL-----------DRLLVETDSPYLAPVPHRGKENQPAM----VRD-VAE 229 (265)
T ss_dssp TTCEEEECG----GGGSTTCHHHHHHHHHSCG-----------GGEEECCCBTSCCCTTCTTSCCCGGG----HHH-HHH
T ss_pred CCCEEECCC----CCCCHHHHHHHHHHHHCCH-----------HHEEEECCCCCCCCCCCCCCCCCHHH----HHH-HHH
T ss_conf 698791255----4441347999999985043-----------44576137865676555898885699----999-999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 999985899899999999999972
Q gi|254780588|r 290 FLSETSTYSETEIREHRRQKYLNI 313 (317)
Q Consensus 290 ~L~~L~~~~~~~Li~~R~~Kf~~i 313 (317)
.+.++.+++.+++.++=++-++++
T Consensus 230 ~iA~l~~~~~eel~~~~~~N~~~l 253 (265)
T 1yix_A 230 YMAVLKGVAVEELAQVTTDNFARL 253 (265)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 999884989999999999999999
No 108
>2qn6_A Translation initiation factor 2 gamma subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus P2} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 2aho_A 2qmu_A* 2plf_A* 3i1f_A* 3cw2_A 2pmd_A*
Probab=45.45 E-value=14 Score=16.49 Aligned_cols=21 Identities=14% Similarity=0.272 Sum_probs=10.0
Q ss_pred EEEEEEEEECCCEEEEEEECCC
Q ss_conf 2999988753800899984587
Q gi|254780588|r 97 AMQIGLARFHGQPVAIIGQEKG 118 (317)
Q Consensus 97 aii~G~a~i~g~~v~vig~~kG 118 (317)
.+++|.... +..++||.-.+|
T Consensus 102 ~~i~g~~~a-D~ailvV~a~~G 122 (414)
T 2qn6_A 102 TMLSGAALM-DGAILVVAANEP 122 (414)
T ss_dssp HHHHTSSCC-SEEEEEEETTSC
T ss_pred HHHHHCCCC-CCEEEEEECCCC
T ss_conf 998320156-834999986678
No 109
>1eg7_A Formyltetrahydrofolate synthetase; folate binding, ATP binding, formate binding, monovalent cation binding, ligase; 2.50A {Moorella thermoacetica} SCOP: c.37.1.10 PDB: 1fpm_A 1fp7_A
Probab=43.53 E-value=16 Score=16.13 Aligned_cols=100 Identities=23% Similarity=0.446 Sum_probs=51.3
Q ss_pred CEEEEEEECCCCCCHHHHHHCCCCC-------CHH----HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCHHHH
Q ss_conf 0089998458775023442026776-------836----89999999999997199489999535324677-84300279
Q gi|254780588|r 108 QPVAIIGQEKGSDTKSRIKHNFGSP-------RPE----GYRKAVRLMEMADRFKIPVISFIDTAGAYPGV-DAEARGQG 175 (317)
Q Consensus 108 ~~v~vig~~kG~~~~~~~~~n~G~~-------~p~----g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~-~aE~~G~~ 175 (317)
--|+++++-+ -.+.++|.. +.+ |+.-..|-++...+|++|+|--|+- |+.- ++|..
T Consensus 326 ~~~VlVaTvR------ALK~HGG~~~~~l~~eNl~Al~~G~~NL~rHIeNl~~fGvpvVVAIN~---F~tDT~~Ei~--- 393 (557)
T 1eg7_A 326 DATVIVATVR------ALKMHGGVPKSDLATENLEALREGFANLEKHIENIGKFGVPAVVAINA---FPTDTEAELN--- 393 (557)
T ss_dssp CEEEEEECHH------HHHHTTTCCGGGTTSCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEC---CTTCCHHHHH---
T ss_pred CEEEEEEECC------EEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC---CCCCCHHHHH---
T ss_conf 8668996411------064258988577464079999977766999997554328974898437---7767788999---
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEE-EC--CCCEEEECH
Q ss_conf 99999988862379988999961677775421133200022-04--674012155
Q gi|254780588|r 176 EAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYM-LE--HAIYSVISP 227 (317)
Q Consensus 176 ~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m-~~--~s~ysvisP 227 (317)
.+. ..+....++ +++...+ |+-||..++ ..|+- ++ .+-|..+-|
T Consensus 394 -~i~---~~~~~~Gv~-~a~~wa~-GG~Ga~dLA--~~Vv~~~~~~~~~f~~LY~ 440 (557)
T 1eg7_A 394 -LLY---ELCAKAGAE-VALSWAK-GGEGGLELA--RKVLQTLESRPSNFHVLYN 440 (557)
T ss_dssp -HHH---HHTTTSEEE-EECCTTT-GGGGGHHHH--HHHHHHHHHSCCCCCCSSC
T ss_pred -HHH---HHHHHCCCE-EEEECCC-CCCCHHHHH--HHHHHHHHCCCCCCCCCCC
T ss_conf -999---999865981-7641135-763579999--9999998515346654467
No 110
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, alternative splicing, amyloid, amyloidosis, blood coagulation, coiled coil; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=41.88 E-value=10 Score=17.48 Aligned_cols=11 Identities=18% Similarity=0.250 Sum_probs=3.8
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780588|r 37 IRELEAMVCKT 47 (317)
Q Consensus 37 i~~Le~k~~~~ 47 (317)
+.+||..++..
T Consensus 147 ~~~le~~~~~~ 157 (562)
T 3ghg_A 147 MKRLEVDIDIK 157 (562)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 111
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=41.76 E-value=17 Score=15.95 Aligned_cols=13 Identities=31% Similarity=0.378 Sum_probs=7.1
Q ss_pred EEEEECCCCCCCC
Q ss_conf 9999535324677
Q gi|254780588|r 155 ISFIDTAGAYPGV 167 (317)
Q Consensus 155 v~lvDtpGa~~g~ 167 (317)
|+++||||..-..
T Consensus 73 i~~iDTPGl~d~~ 85 (260)
T 2xtp_A 73 IVIIDTPDMFSWK 85 (260)
T ss_dssp EEEEECCGGGGSS
T ss_pred EEEECCCCCCCCC
T ss_conf 9993476504685
No 112
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, cytoplasm, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=39.69 E-value=4 Score=20.38 Aligned_cols=64 Identities=14% Similarity=0.232 Sum_probs=37.6
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH------HHHCCCCCEEEEEECCCCCCCCCCCCCCCCE
Q ss_conf 9999999971994899995353246778430027999999988------8623799889999616777754211332000
Q gi|254780588|r 141 VRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATE------MCLKLQVPILSIIIGEGGSGGAMGIAAANFV 214 (317)
Q Consensus 141 ~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~------~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v 214 (317)
.+..+.|++|+++.-.+++..| ++.++.+.+.+- .-....-|.|.|+.|.|-.|| =++++|-.+
T Consensus 86 ~~~e~~ae~~Gls~~~lmEnAG---------r~~a~~~~~~lgg~~Rl~~~n~~~~P~VlVlcG~GnNGg-DGla~AR~L 155 (306)
T 3d3j_A 86 KKLLSVAEKHGLTLERRLEMTG---------VCASQMALTLLGGPNRLNPKNVHQRPTVALLCGPHVKGA-QGISCGRHL 155 (306)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHH---------HHHHHHHHHHHC-----------CCCEEEEEECSSHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHH---------HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCH-HHHHHHHHH
T ss_conf 9999999984999899999999---------999999999837764456343588986999989999809-999999999
No 113
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=39.34 E-value=18 Score=15.71 Aligned_cols=89 Identities=17% Similarity=0.328 Sum_probs=54.6
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEEC-CCEEEEEEECCCCCCHHHHHHCCCC
Q ss_conf 269999988876350022379998622545067227533478972999988753-8008999845877502344202677
Q gi|254780588|r 53 SKLTPWQKTQVSRHPNRPHYIDYINSLFTHFISLAGDRLFGDDPAMQIGLARFH-GQPVAIIGQEKGSDTKSRIKHNFGS 131 (317)
Q Consensus 53 ~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~df~el~GDr~~~dD~aii~G~a~i~-g~~v~vig~~kG~~~~~~~~~n~G~ 131 (317)
++++|-+-.++++.-. +..+. +|.|+-.||..--.+- |-..-|..-+ .+||++.|-+ |..+.
T Consensus 81 ~~m~p~~w~~la~~i~-----~~~~~-~dGvVVtHGTDTleeT-A~~L~~~l~~~~kPVVlTGAm----------rp~~~ 143 (358)
T 2him_A 81 SDMTPEDWQHIAEDIK-----AHYDD-YDGFVILHGTDTMAYT-ASALSFMLENLGKPVIVTGSQ----------IPLAE 143 (358)
T ss_dssp GGCCHHHHHHHHHHHH-----HHGGG-CSEEEEECCSTTHHHH-HHHHHHHEETCCSCEEEECCS----------SCTTS
T ss_pred CCCCHHHHHHHHHHHH-----HHHCC-CCCEEEECCCCHHHHH-HHHHHHHHHCCCCCEEEECCC----------CCCCC
T ss_conf 1089999999999999-----85236-9978997586369999-999999864789856996888----------88877
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 683689999999999997199489999
Q gi|254780588|r 132 PRPEGYRKAVRLMEMADRFKIPVISFI 158 (317)
Q Consensus 132 ~~p~g~rKa~r~~~~A~~f~lPiv~lv 158 (317)
+..+|.+-....+.+|.....+=|..+
T Consensus 144 ~~sDg~~NL~~Av~~A~~~~~~gV~v~ 170 (358)
T 2him_A 144 LRSDGQINLLNALYVAANYPINEVTLF 170 (358)
T ss_dssp TTCSHHHHHHHHHHHHHHSCCSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 676337789999999732577827997
No 114
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=39.23 E-value=8.6 Score=18.04 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=13.5
Q ss_pred CEEEEEECCCCCCCCCCC
Q ss_conf 489999535324677843
Q gi|254780588|r 153 PVISFIDTAGAYPGVDAE 170 (317)
Q Consensus 153 Piv~lvDtpGa~~g~~aE 170 (317)
.-+++|||||+......+
T Consensus 95 ~~l~viDTPG~~D~~~~~ 112 (427)
T 2qag_B 95 LKLTIVSTVGFGDQINKE 112 (427)
T ss_dssp EEEEEEEEECCCC-CCHH
T ss_pred EEEEEEECCCCCCCCCCH
T ss_conf 769998488965543545
No 115
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=39.09 E-value=19 Score=15.67 Aligned_cols=131 Identities=15% Similarity=0.227 Sum_probs=74.9
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECC
Q ss_conf 99999999971994899995353246778430027999999988862379988999961677775421133200022046
Q gi|254780588|r 140 AVRLMEMADRFKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMGIAAANFVYMLEH 219 (317)
Q Consensus 140 a~r~~~~A~~f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a~~~~d~v~m~~~ 219 (317)
-.+.+++|.++++||+-=. .+|. ..+.. .+.....|...+|+ -+.+|..--+ .++ ++.
T Consensus 122 F~~ql~lA~~~~~Pv~iH~--r~a~-----------~~~~~---il~~~~~~~~~~i~-H~fsG~~e~~---~~~--l~~ 179 (268)
T 1j6o_A 122 FVEQIELAGKLNLPLVVHI--RDAY-----------SEAYE---ILRTESLPEKRGVI-HAFSSDYEWA---KKF--IDL 179 (268)
T ss_dssp HHHHHHHHHHHTCCEEEEE--ESCH-----------HHHHH---HHHHSCCCSSCEEE-TTCCSCHHHH---HHH--HHH
T ss_pred HHHHHHHHHHCCCCEEEEE--CCHH-----------HHHHH---HHHHHCCCCCCEEE-EECCCCHHHH---HHH--HHC
T ss_conf 9999999986199879971--0068-----------99999---99982587667589-8548989999---999--978
Q ss_pred CCEEEECHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEE---------CCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7401215544224421560122565542038848999789965262---------2889844489899999999999999
Q gi|254780588|r 220 AIYSVISPEGAASILWRDSSRAAQAAIAMKIIATDLQDLSIIDGII---------PEPIGGAHRNPAQTISSVGEIISQF 290 (317)
Q Consensus 220 s~ysvisPEg~AsILwkd~~~a~eAAealklTa~DL~~lGiID~II---------~EP~GGAHrd~~~~~~~lk~~i~~~ 290 (317)
++|--+++ .+.++.+.+..+++..+.+ |.++ |.|..|-...|..+ . .+.+.
T Consensus 180 G~y~s~~g----~~~~~~~~~~~~~v~~iPl-----------drlLlETDaP~l~p~~~~g~~n~P~~l----~-~v~~~ 239 (268)
T 1j6o_A 180 GFLLGIGG----PVTYPKNEALREVVKRVGL-----------EYIVLETDCPFLPPQPFRGKRNEPKYL----K-YVVET 239 (268)
T ss_dssp TEEEEECG----GGGCTTCHHHHHHHHHHCG-----------GGEEECCCBTSCCCGGGTTSCCCGGGH----H-HHHHH
T ss_pred CCEEEECC----CCCCCHHHHHHHHHHHCCC-----------CEEEEECCCCCCCCCCCCCCCCCHHHH----H-HHHHH
T ss_conf 99598557----6440008999999984786-----------506874589877765557887975999----9-99999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 9998589989999999999997
Q gi|254780588|r 291 LSETSTYSETEIREHRRQKYLN 312 (317)
Q Consensus 291 L~~L~~~~~~~Li~~R~~Kf~~ 312 (317)
+.++.+++.+++.++=++-+++
T Consensus 240 iA~i~~~~~e~v~~~~~~N~~~ 261 (268)
T 1j6o_A 240 ISQVLGVPEAKVDEATTENARR 261 (268)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHH
T ss_conf 9988498999999999999999
No 116
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=39.06 E-value=19 Score=15.66 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=26.8
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 2026776836899999999999971994899995353
Q gi|254780588|r 126 KHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAG 162 (317)
Q Consensus 126 ~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpG 162 (317)
.-|.|.++++..+-.....+.|.+.+.|+|. |--|
T Consensus 63 viN~Gtl~~~~~~~m~~a~~~A~~~~~PvVL--DpVg 97 (272)
T 1ekq_A 63 VLNIGTLSKESVEAMIIAGKSANEHGVPVIL--DPVG 97 (272)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHHTTCCEEE--ECTT
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCEEE--CCCC
T ss_conf 8507999989999999999999980998998--4735
No 117
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=38.03 E-value=17 Score=15.95 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 699999999999999999
Q gi|254780588|r 33 FSEEIRELEAMVCKTLSE 50 (317)
Q Consensus 33 ~~~ei~~Le~k~~~~~~~ 50 (317)
+...|..||.|++.+...
T Consensus 21 lEkri~~LEtkLd~l~~s 38 (43)
T 2pnv_A 21 FEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999899999988
No 118
>3p26_A Elongation factor 1 alpha-like protein; GTP/GDP binding domain, beta-barrel, translational GTPase, D structural genomics; 2.50A {Saccharomyces cerevisiae} PDB: 3p27_A*
Probab=37.11 E-value=20 Score=15.46 Aligned_cols=12 Identities=25% Similarity=0.260 Sum_probs=5.0
Q ss_pred HHHHHHHHCCCC
Q ss_conf 999999971994
Q gi|254780588|r 142 RLMEMADRFKIP 153 (317)
Q Consensus 142 r~~~~A~~f~lP 153 (317)
+-+.+|..+++|
T Consensus 161 ehl~l~~~lgi~ 172 (483)
T 3p26_A 161 EHMLLASSLGIH 172 (483)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHCCCC
T ss_conf 999999986998
No 119
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=36.89 E-value=20 Score=15.43 Aligned_cols=17 Identities=18% Similarity=0.151 Sum_probs=8.9
Q ss_pred EEEEEEEECCCEEEEEE
Q ss_conf 99998875380089998
Q gi|254780588|r 98 MQIGLARFHGQPVAIIG 114 (317)
Q Consensus 98 ii~G~a~i~g~~v~vig 114 (317)
...+...++|+.+.||=
T Consensus 74 ~~~~~~~~~~~~i~liD 90 (262)
T 3def_A 74 PVMVSRTMGGFTINIID 90 (262)
T ss_dssp CEEEEEEETTEEEEEEE
T ss_pred CEEEEEEECCEEEEEEE
T ss_conf 22789998884899983
No 120
>1zun_B Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae PV} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=36.31 E-value=20 Score=15.37 Aligned_cols=56 Identities=14% Similarity=0.255 Sum_probs=28.3
Q ss_pred EEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC-EEEEE
Q ss_conf 06722753347897299998875380089998458775023442026776836899999999999971994-89999
Q gi|254780588|r 83 FISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIP-VISFI 158 (317)
Q Consensus 83 f~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lP-iv~lv 158 (317)
|+.+-|-..|- +.+++|.... +.-+.||+-++|.. |. ...-+.+|.-+++| +|..+
T Consensus 108 ~iD~PGH~~fi--~nmi~g~~~~-D~alLVV~A~~G~~-------------~Q----T~EHl~i~~~lgi~~iIV~i 164 (434)
T 1zun_B 108 IADTPGHEQYT--RNMATGASTC-DLAIILVDARYGVQ-------------TQ----TRRHSYIASLLGIKHIVVAI 164 (434)
T ss_dssp EEECCCSGGGH--HHHHHHHTTC-SEEEEEEETTTCSC-------------HH----HHHHHHHHHHTTCCEEEEEE
T ss_pred EEECCCCHHHH--HHHHHHCCCC-CEEEEEEECCCCCC-------------CC----HHHHHHHHHHCCCCEEEEEE
T ss_conf 99799837889--9998534367-55999860567777-------------44----37999999981998699999
No 121
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type III, transferase; 1.90A {Marchantia polymorpha}
Probab=35.44 E-value=16 Score=16.03 Aligned_cols=40 Identities=20% Similarity=0.071 Sum_probs=16.6
Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEE-CCCCEEEECHHHHH
Q ss_conf 89999616777754211332000220-46740121554422
Q gi|254780588|r 192 ILSIIIGEGGSGGAMGIAAANFVYML-EHAIYSVISPEGAA 231 (317)
Q Consensus 192 ~i~vv~geg~sGGA~a~~~~d~v~m~-~~s~ysvisPEg~A 231 (317)
....+++-||+|+..++.+|...+.. +...--|++.|-|+
T Consensus 173 ~~~~~~~~gC~g~~~aL~~A~~~i~~g~~~~vLvV~~E~~S 213 (413)
T 2p0u_A 173 RRVMMYQQGAFAGATVLRVAKDLAENNAGARVLAICSEVTA 213 (413)
T ss_dssp EEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECST
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 02302368288999999999999981999749999500135
No 122
>3llc_A Putative hydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=35.26 E-value=21 Score=15.26 Aligned_cols=47 Identities=23% Similarity=0.371 Sum_probs=29.0
Q ss_pred CCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf 38008999845877502344202677683689999999999997199489999535324677
Q gi|254780588|r 106 HGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGV 167 (317)
Q Consensus 106 ~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~ 167 (317)
+.+|++|+-| | |+ -+.++ .++..+.+.+.+.+.-|+.| |-+|.--..
T Consensus 35 ~~~P~vv~~H--G----------~~-~~~~~-~~~~~l~~~l~~~G~~v~~~-D~rG~G~s~ 81 (270)
T 3llc_A 35 DERPTCIWLG--G----------YR-SDMTG-TKALEMDDLAASLGVGAIRF-DYSGHGASG 81 (270)
T ss_dssp TTSCEEEEEC--C----------TT-CCTTS-HHHHHHHHHHHHHTCEEEEE-CCTTSTTCC
T ss_pred CCCCEEEEEC--C----------CC-CCCCC-CHHHHHHHHHHHCCCEEEEE-ECCCCCCCC
T ss_conf 9883899938--9----------66-68776-78999999999789989998-379998888
No 123
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3h07_A
Probab=34.95 E-value=21 Score=15.23 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=16.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECC
Q ss_conf 6778430027999999988862379-9889999616
Q gi|254780588|r 165 PGVDAEARGQGEAIARATEMCLKLQ-VPILSIIIGE 199 (317)
Q Consensus 165 ~g~~aE~~G~~~aia~~l~~~~~~~-vP~i~vv~ge 199 (317)
+|--.+.+|..++ +--|..|+.+. +-+||-++.+
T Consensus 144 ~gGvl~R~GHTEa-avdL~~lAGl~P~avi~Eil~~ 178 (217)
T 1g57_A 144 AGGVLTRGGHTEA-TIDLMTLAGFKPAGVLCELTND 178 (217)
T ss_dssp TTGGGTCCSHHHH-HHHHHHHTTSCSCEEEEEBBCT
T ss_pred CCCCCCCCCHHHH-HHHHHHHCCCCCCEEEEEEECC
T ss_conf 7980678968989-9999998199983899998559
No 124
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=34.92 E-value=15 Score=16.25 Aligned_cols=40 Identities=23% Similarity=0.264 Sum_probs=26.0
Q ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 1994899995353246778430027999999988862379988999961677
Q gi|254780588|r 150 FKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGG 201 (317)
Q Consensus 150 f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~ 201 (317)
-+.|||.++.-.||+-+.. .|......+.|++.||+--|+
T Consensus 442 p~r~vv~i~GDgsf~~~~~------------eL~t~~~~~lpi~iiV~NN~g 481 (568)
T 2c31_A 442 TGKPVIAVEGDSAFGFSGM------------ELETICRYNLPVTVIIMNNGG 481 (568)
T ss_dssp HCSCEEEEEEHHHHHTTGG------------GHHHHHHTTCCEEEEEEESSB
T ss_pred CCCCEEEECCCCHHCCCHH------------HHHHHHHHCCCEEEEEEECCH
T ss_conf 5982798607701016799------------999999969692999992866
No 125
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=34.87 E-value=21 Score=15.22 Aligned_cols=14 Identities=14% Similarity=0.686 Sum_probs=6.0
Q ss_pred HCCCCCEEEEEECC
Q ss_conf 23799889999616
Q gi|254780588|r 186 LKLQVPILSIIIGE 199 (317)
Q Consensus 186 ~~~~vP~i~vv~ge 199 (317)
+..+.|++.||+..
T Consensus 450 ~~~~lpi~ivV~NN 463 (566)
T 2vbi_A 450 VRYELPVIIFLINN 463 (566)
T ss_dssp HHTTCCCEEEEEEC
T ss_pred HHHCCCEEEEEEEC
T ss_conf 99497929999979
No 126
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} SCOP: c.72.1.2 PDB: 3hpd_A
Probab=34.70 E-value=22 Score=15.20 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=28.6
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 202677683689999999999997199489999535324
Q gi|254780588|r 126 KHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTAGAY 164 (317)
Q Consensus 126 ~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~ 164 (317)
.-|.|+++++..+-.....+.|.+.+.|+| +|-.|..
T Consensus 61 ~in~Gtl~~~~~~~~~~a~~~A~~~~~PvV--LDpvgv~ 97 (265)
T 1v8a_A 61 VINIGTLDSGWRRSMVKATEIANELGKPIV--LDPVGAG 97 (265)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHHHTCCEE--EECTTBT
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHCCCCEE--ECCCCCC
T ss_conf 886787998999999999999997199999--8087668
No 127
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=34.66 E-value=22 Score=15.19 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 4557899999999999974223666776999999999999999
Q gi|254780588|r 6 DFEEPISDLEAKIHELKKLSREDINEDFSEEIRELEAMVCKTL 48 (317)
Q Consensus 6 dFEkpI~eLe~kI~eL~~~~~~~~~~~~~~ei~~Le~k~~~~~ 48 (317)
+.|++|++|+.+|+.|..+. ...+.|+.|...+-
T Consensus 51 eLeeEI~~L~~eI~~LE~iq---------s~aK~LRNKA~~Le 84 (96)
T 1t3j_A 51 HLEEEIARLSKEIDQLEKMQ---------NNSKLLRNKAVQLE 84 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHH
T ss_conf 99999999999999999999---------99999987898899
No 128
>2rdo_7 EF-G, elongation factor G; elongation factor G, EF-G, RRF, GDPNP, 50S subunit, cryo-EM, REAL-space refinement, ribonucleoprotein; 9.10A {Escherichia coli}
Probab=34.65 E-value=22 Score=15.19 Aligned_cols=15 Identities=7% Similarity=0.348 Sum_probs=7.4
Q ss_pred CCHHHHHHHHHHHHH
Q ss_conf 314557899999999
Q gi|254780588|r 4 YLDFEEPISDLEAKI 18 (317)
Q Consensus 4 yLdFEkpI~eLe~kI 18 (317)
+.||.+.+.++..++
T Consensus 148 ~~~~~~~~~~i~~~l 162 (704)
T 2rdo_7 148 GANFLKVVNQIKTRL 162 (704)
T ss_pred CCCHHHHHHHHHHHH
T ss_conf 789999999999987
No 129
>3mmp_A Elongation factor TU 2, elongation factor TS; RDRP,HOST-factor complex, translation, transferase; HET: PXN; 2.50A {Escherichia coli}
Probab=34.36 E-value=15 Score=16.25 Aligned_cols=45 Identities=13% Similarity=0.179 Sum_probs=22.4
Q ss_pred EEEEEECCCC-----------------CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 8999953532-----------------467784300279999999888623799889999616
Q gi|254780588|r 154 VISFIDTAGA-----------------YPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGE 199 (317)
Q Consensus 154 iv~lvDtpGa-----------------~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~ge 199 (317)
.++|+||||- ..=++|.++-+.+. -+.+..+..+.+|.+-|++-.
T Consensus 360 ~i~iID~PGH~df~~nmi~G~s~aD~AiLVVdA~~Gv~~QT-rEHl~la~~lGi~~iIV~INK 421 (678)
T 3mmp_A 360 HYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQT-REHILLGRQVGVPYIIVFLNK 421 (678)
T ss_dssp EEEEEECCCHHHHHHHHHHTSCCCSEEEEEEETTTCCCTTH-HHHHHHHHHTTCSCEEEEEEC
T ss_pred EEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHH-HHHHHHHHHCCCCEEEEEEEC
T ss_conf 99999899628779999999976989999998999964889-999999998399807999865
No 130
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=34.28 E-value=22 Score=15.15 Aligned_cols=88 Identities=9% Similarity=0.117 Sum_probs=52.3
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEE-CCCEEEEEEECCCCCCHHHHHHCCCC
Q ss_conf 26999998887635002237999862254506722753347897299998875-38008999845877502344202677
Q gi|254780588|r 53 SKLTPWQKTQVSRHPNRPHYIDYINSLFTHFISLAGDRLFGDDPAMQIGLARF-HGQPVAIIGQEKGSDTKSRIKHNFGS 131 (317)
Q Consensus 53 ~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~df~el~GDr~~~dD~aii~G~a~i-~g~~v~vig~~kG~~~~~~~~~n~G~ 131 (317)
+++||.+-.+++++-.+- .+. +|.|+-+||..--.+- |-...+..- -++||++.|-| |..+.
T Consensus 53 ~~~~~~~w~~la~~i~~~-----~~~-~dGvVVtHGTDTl~~T-A~~Ls~~~~~~~kPVVlTGa~----------rp~~~ 115 (328)
T 1wls_A 53 TLIQPSDWERLAKEIEKE-----VWE-YDGIVITHGTDTMAYS-ASMLSFMLRNPPIPIVLTGSM----------LPITE 115 (328)
T ss_dssp GGCCHHHHHHHHHHHHHH-----TTT-CSEEEEECCGGGHHHH-HHHHHHHEESCSSEEEEECCS----------SCTTS
T ss_pred HHCCHHHHHHHHHHHHHH-----HHC-CCCEEEECCCCHHHHH-HHHHHHHHHCCCCCEEEECCC----------CCCCC
T ss_conf 238999999999999987-----615-8988996686329999-999999974799988997978----------88877
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 683689999999999997199489999
Q gi|254780588|r 132 PRPEGYRKAVRLMEMADRFKIPVISFI 158 (317)
Q Consensus 132 ~~p~g~rKa~r~~~~A~~f~lPiv~lv 158 (317)
+..+|-+-....+.+|.. ..|=|..+
T Consensus 116 ~~sDg~~NL~~Av~~A~~-~~~gV~v~ 141 (328)
T 1wls_A 116 KNSDAPFNLRTALEFVKL-GIRGIYIA 141 (328)
T ss_dssp SSCSHHHHHHHHHHHHTT-TCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHH-CCCCEEEE
T ss_conf 786179999999999875-48866996
No 131
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=33.13 E-value=23 Score=15.03 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=13.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECC
Q ss_conf 6778430027999999988862379-9889999616
Q gi|254780588|r 165 PGVDAEARGQGEAIARATEMCLKLQ-VPILSIIIGE 199 (317)
Q Consensus 165 ~g~~aE~~G~~~aia~~l~~~~~~~-vP~i~vv~ge 199 (317)
+|--.+.+|..++-- -|..|+.+. +-+||-++++
T Consensus 155 ~gGvl~R~GHTEaaV-dL~~lAGl~P~avi~Eil~~ 189 (227)
T 1snn_A 155 EGLVKNRQGHTEMTV-ALAELANLVPITTICEMMGD 189 (227)
T ss_dssp TTGGGTCCSHHHHHH-HHHHHTTSCSEEEEEEEBCT
T ss_pred CCCCCCCCCHHHHHH-HHHHHCCCCCEEEEEEEECC
T ss_conf 688744787799999-99998299864999998569
No 132
>1ueh_A Undecaprenyl pyrophosphate synthase; parallel alpha-beta, rossmann-like fold, transferase; HET: OXN; 1.73A {Escherichia coli} SCOP: c.101.1.1 PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1x09_A* 1x08_A*
Probab=32.47 E-value=23 Score=14.95 Aligned_cols=27 Identities=15% Similarity=0.240 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 836899999999999971994899995
Q gi|254780588|r 133 RPEGYRKAVRLMEMADRFKIPVISFID 159 (317)
Q Consensus 133 ~p~g~rKa~r~~~~A~~f~lPiv~lvD 159 (317)
|-.|+.|..++++.|.+++++.||+=-
T Consensus 43 h~~G~~~l~eiv~wc~~lGIk~lTvYa 69 (253)
T 1ueh_A 43 HKAGAKSVRRAVSFAANNGIEALTLYA 69 (253)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 999999999999999976998899986
No 133
>3iee_A Putative exported protein; YP_212931.1, hypothetical protein BF3319 from bacteroides fragilis, structural genomics; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=32.31 E-value=23 Score=14.94 Aligned_cols=74 Identities=9% Similarity=0.212 Sum_probs=53.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHHHHHHHCCCCHH----HHHHHHHCCHHHHHH
Q ss_conf 97531455789999999999997422366677---69999999999999999974269999----988876350022379
Q gi|254780588|r 1 MRHYLDFEEPISDLEAKIHELKKLSREDINED---FSEEIRELEAMVCKTLSEIYSKLTPW----QKTQVSRHPNRPHYI 73 (317)
Q Consensus 1 M~~yLdFEkpI~eLe~kI~eL~~~~~~~~~~~---~~~ei~~Le~k~~~~~~~iy~~Lt~w----~~v~~aRh~~Rp~~~ 73 (317)
|++|-++.+.+..+...+......-+...-.+ +-++-.+|..+..+....||.-|||. |.+.++-||-+-+.+
T Consensus 94 ~q~y~~lf~s~~~fyanf~~y~sylk~~~~~~~~kL~~~~~~ls~~~~e~kq~ifdiLsP~a~qAE~~lL~d~PLKeqIi 173 (270)
T 3iee_A 94 KQNYTGLFQARTEFYANFDTYLSYLKKKDVTNAKKLLDVNYQLSTQMSEYKQNIFDILSPFTEQAELVLLVDNPLKAQIM 173 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH
T ss_conf 99999999999999998999999988760643999999899999999999988999813888878999972796389999
Q ss_pred H
Q ss_conf 9
Q gi|254780588|r 74 D 74 (317)
Q Consensus 74 d 74 (317)
.
T Consensus 174 a 174 (270)
T 3iee_A 174 S 174 (270)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 134
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=32.00 E-value=24 Score=14.90 Aligned_cols=33 Identities=9% Similarity=0.164 Sum_probs=23.1
Q ss_pred HHCCCCCCH----HHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 202677683----689999999999997199489999
Q gi|254780588|r 126 KHNFGSPRP----EGYRKAVRLMEMADRFKIPVISFI 158 (317)
Q Consensus 126 ~~n~G~~~p----~g~rKa~r~~~~A~~f~lPiv~lv 158 (317)
++.-|++.. .|+.|..++++.|.++++|.||+=
T Consensus 30 Ak~~g~~~~~Gh~~G~~~l~~i~~~c~~~gI~~lTvY 66 (245)
T 2d2r_A 30 AKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLY 66 (245)
T ss_dssp HHTTTCCHHHHHHHHHHHHHHHHHHHHTTTCSEEEEE
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 9887997789999999999999999997799889977
No 135
>2b94_A Purine nucleoside phosphorylase; SGPP, structural genomics, PSI, protein structure initiative, PNP, UDP, ontario/toronto SGC; 1.85A {Plasmodium knowlesi} PDB: 3emv_A 1sq6_A 2bsx_A* 3enz_A*
Probab=31.41 E-value=24 Score=14.84 Aligned_cols=78 Identities=19% Similarity=0.221 Sum_probs=50.4
Q ss_pred HHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHH
Q ss_conf 88763500223799986225450672275334789729999887538008999845877502344202677683689999
Q gi|254780588|r 61 TQVSRHPNRPHYIDYINSLFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKA 140 (317)
Q Consensus 61 v~~aRh~~Rp~~~dyi~~l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa 140 (317)
|-+.=.|.| -++|..+||+..++.--|. ..+--|.++|++|.|+.+ ||-.|...--.
T Consensus 42 vi~~GDP~R---~~~ia~~ld~~~~~~~~R~------~~~~tG~y~G~~V~v~s~--------------GiG~psa~i~~ 98 (267)
T 2b94_A 42 VLVVGDPGR---VDKVKMLCDSYVDLAYNRE------YKSVECTYKGQKFLCVSH--------------GVGSAGCAICF 98 (267)
T ss_dssp EEECSSHHH---HHHHHHTSSEEEECC---C------EEEEEEEETTEEEEEEEE--------------CTTCSCSHHHH
T ss_pred EEECCCHHH---HHHHHHHCCCCEEEECCCC------EEEEEEEECCEEEEEEEC--------------CCCHHHHHHHH
T ss_conf 996899799---9999997088545521288------799999996899999955--------------76688899999
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCC
Q ss_conf 9999999971994899995353246
Q gi|254780588|r 141 VRLMEMADRFKIPVISFIDTAGAYP 165 (317)
Q Consensus 141 ~r~~~~A~~f~lPiv~lvDtpGa~~ 165 (317)
. .|. +++...|-.+-|.|+..
T Consensus 99 ~---eL~-~~g~~~iIriGt~Ggl~ 119 (267)
T 2b94_A 99 E---ELM-NNGAKVIIRAGSCGSLQ 119 (267)
T ss_dssp H---HHH-HTTCCEEEEEEEEEESC
T ss_pred H---HHH-HCCCCEEEEECCCCCCC
T ss_conf 9---999-70996799963122666
No 136
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=31.12 E-value=24 Score=14.80 Aligned_cols=20 Identities=30% Similarity=0.592 Sum_probs=14.2
Q ss_pred EEEEECCCCC-CCCCCCCHHH
Q ss_conf 9999535324-6778430027
Q gi|254780588|r 155 ISFIDTAGAY-PGVDAEARGQ 174 (317)
Q Consensus 155 v~lvDtpGa~-~g~~aE~~G~ 174 (317)
++|+||||-. |....++.+.
T Consensus 167 i~l~DTPGi~~p~~~~~~~~~ 187 (282)
T 1puj_A 167 LELLDTPGILWPKFEDELVGL 187 (282)
T ss_dssp EEEEECCCCCCSCCCCHHHHH
T ss_pred CEEECCCCCCCCCCCCHHHHH
T ss_conf 078557752478876688898
No 137
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=30.95 E-value=25 Score=14.78 Aligned_cols=14 Identities=14% Similarity=0.449 Sum_probs=6.1
Q ss_pred HCCCCCEEEEEECC
Q ss_conf 23799889999616
Q gi|254780588|r 186 LKLQVPILSIIIGE 199 (317)
Q Consensus 186 ~~~~vP~i~vv~ge 199 (317)
...++|++.||+-.
T Consensus 554 ~r~~lpi~ivV~NN 567 (677)
T 1t9b_A 554 VQAGTPVKILILNN 567 (677)
T ss_dssp HHHTCCCEEEEEEC
T ss_pred HHHCCCEEEEEEEC
T ss_conf 99786929999969
No 138
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, cytoplasm, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=30.28 E-value=7.2 Score=18.59 Aligned_cols=20 Identities=20% Similarity=0.092 Sum_probs=10.5
Q ss_pred HHHHHCCCCCEEEEEECCCC
Q ss_conf 88862379988999961677
Q gi|254780588|r 182 TEMCLKLQVPILSIIIGEGG 201 (317)
Q Consensus 182 l~~~~~~~vP~i~vv~geg~ 201 (317)
+..+...+.|++||=+=.|.
T Consensus 180 i~~~N~~~a~VlSiDiPSG~ 199 (259)
T 3d3k_A 180 VAWANQNRAPVLSIDPPVHE 199 (259)
T ss_dssp HHHHHHHCSCEEEESCCCC-
T ss_pred HHHHHHCCCCEEEEECCCCC
T ss_conf 99998579978999789998
No 139
>3gaa_A Uncharacterized protein TA1441; the protein with unknown function from thermoplasma acidophilum, structural genomics,PSI, MCSG; 2.70A {Thermoplasma acidophilum}
Probab=30.18 E-value=25 Score=14.70 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=20.7
Q ss_pred CCCHHH-HHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 768368-99999999999971994899995
Q gi|254780588|r 131 SPRPEG-YRKAVRLMEMADRFKIPVISFID 159 (317)
Q Consensus 131 ~~~p~g-~rKa~r~~~~A~~f~lPiv~lvD 159 (317)
.+.|++ ++-+..++++|.+++.--|..+.
T Consensus 97 p~~~~~~~~~~~~i~~~~~~~gv~~ii~l~ 126 (252)
T 3gaa_A 97 PISSAHIYEISNTLMNWIDQVGASEIVIME 126 (252)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 898137999999999999982993899972
No 140
>2zkr_6 60S ribosomal protein L30E; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1ysh_C
Probab=29.80 E-value=26 Score=14.65 Aligned_cols=36 Identities=14% Similarity=0.035 Sum_probs=25.2
Q ss_pred CEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 008999845877502344202677683689999999999997199489999535
Q gi|254780588|r 108 QPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVISFIDTA 161 (317)
Q Consensus 108 ~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtp 161 (317)
..++|++.+-..++. .++..+|+..++|++.|..|.
T Consensus 43 aklVilA~D~~~~~~------------------~~i~~~c~~~~Ip~~~~~~s~ 78 (115)
T 2zkr_6 43 AKLVILANNCPALRK------------------SEIEYYAMLAKTGVHHYSGNN 78 (115)
T ss_dssp EEEEEEETTCCSSTT------------------THHHHHHHHHTCEEEEEESCH
T ss_pred CCEEEEECCCCHHHH------------------HHHHHHHHHCCCCEEEECCCH
T ss_conf 719999688998999------------------999999986699979978999
No 141
>1d2e_A Elongation factor TU (EF-TU); G-protein, beta-barrel, RNA binding protein; HET: GDP; 1.94A {Bos taurus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1xb2_A* 2hcj_A* 2hdn_A*
Probab=29.80 E-value=26 Score=14.65 Aligned_cols=19 Identities=16% Similarity=0.434 Sum_probs=8.7
Q ss_pred EEEEEE---EEEC-CCEEEEEEE
Q ss_conf 299998---8753-800899984
Q gi|254780588|r 97 AMQIGL---ARFH-GQPVAIIGQ 115 (317)
Q Consensus 97 aii~G~---a~i~-g~~v~vig~ 115 (317)
.+++|. |.+. |..|.+++.
T Consensus 219 ~vv~G~v~~G~l~~gd~v~i~p~ 241 (397)
T 1d2e_A 219 TVVTGTLERGILKKGDECEFLGH 241 (397)
T ss_dssp EEEEEECCBSEEETTCEEEEEET
T ss_pred EEEEEEEECCEEECCCEEEEECC
T ss_conf 99999995454825998999359
No 142
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=29.46 E-value=23 Score=15.00 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=18.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 677683689999999999997199489999535
Q gi|254780588|r 129 FGSPRPEGYRKAVRLMEMADRFKIPVISFIDTA 161 (317)
Q Consensus 129 ~G~~~p~g~rKa~r~~~~A~~f~lPiv~lvDtp 161 (317)
+-...|+.|-+++ .+++.+.+--+|.|-.|+
T Consensus 66 ~~~~~~e~~a~al--~~~~~~~~p~~VL~~~T~ 96 (315)
T 1efv_A 66 YKGLLPEELTPLI--LATQKQFNYTHICAGASA 96 (315)
T ss_dssp GTTCCHHHHHHHH--HHHHHHHCCSEEEEESSH
T ss_pred CCCCCCHHHHHHH--HHHHHHCCCCEEEECCCH
T ss_conf 2035603457899--888751485489963774
No 143
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, enzyme, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=29.31 E-value=14 Score=16.45 Aligned_cols=17 Identities=6% Similarity=0.511 Sum_probs=8.7
Q ss_pred HHHCCCCCEEEEEECCC
Q ss_conf 86237998899996167
Q gi|254780588|r 184 MCLKLQVPILSIIIGEG 200 (317)
Q Consensus 184 ~~~~~~vP~i~vv~geg 200 (317)
++...++|++.||+--+
T Consensus 481 t~~~~~lpi~ivV~NN~ 497 (616)
T 2pan_A 481 VGAQFNIPYIHVLVNNA 497 (616)
T ss_dssp HHHHTTCCCEEEEEECS
T ss_pred HHHHHCCCEEEEEEECC
T ss_conf 99995989189999589
No 144
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=28.85 E-value=10 Score=17.49 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=12.4
Q ss_pred HHHHHCC-CCEEEEEECCCC
Q ss_conf 9999719-948999953532
Q gi|254780588|r 145 EMADRFK-IPVISFIDTAGA 163 (317)
Q Consensus 145 ~~A~~f~-lPiv~lvDtpGa 163 (317)
..++.|. -+.|.|+||-|.
T Consensus 275 ~w~~~y~~~l~i~L~DT~g~ 294 (449)
T 1ybe_A 275 DWNRLYGGNLLIVLPDAFGT 294 (449)
T ss_dssp HHHHHCCGGGCEECCCTTCH
T ss_pred HHHHHCCCCCEEEEECCCCH
T ss_conf 99986699635753064458
No 145
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=28.47 E-value=27 Score=14.50 Aligned_cols=15 Identities=20% Similarity=0.224 Sum_probs=6.1
Q ss_pred CCCCCCCCCCCCCCC
Q ss_conf 167777542113320
Q gi|254780588|r 198 GEGGSGGAMGIAAAN 212 (317)
Q Consensus 198 geg~sGGA~a~~~~d 212 (317)
+-||+|+..++.+|+
T Consensus 174 ~~gC~g~~~aL~~A~ 188 (406)
T 2d3m_A 174 MQGAYAGGTVMRYAK 188 (406)
T ss_dssp SCGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 784779999999999
No 146
>1fzc_B Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_B* 1fza_B* 1fze_B* 1fzf_B* 1fzg_B* 1n86_B* 1n8e_B 2h43_B* 2hlo_B* 2hod_B* 2hpc_B* 2q9i_B* 3e1i_B* 2z4e_B* 2oyh_B* 1ltj_B* 1rf0_B* 1lt9_B* 2ffd_B* 1rf1_B* ...
Probab=28.27 E-value=27 Score=14.47 Aligned_cols=46 Identities=17% Similarity=0.331 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 4557899999999999974223666776999999999999999997
Q gi|254780588|r 6 DFEEPISDLEAKIHELKKLSREDINEDFSEEIRELEAMVCKTLSEI 51 (317)
Q Consensus 6 dFEkpI~eLe~kI~eL~~~~~~~~~~~~~~ei~~Le~k~~~~~~~i 51 (317)
|.|+-|.++..+|++.+..-.+..+..+..++..++.+++....+|
T Consensus 1 ~~e~~i~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i 46 (328)
T 1fzc_B 1 DNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKI 46 (328)
T ss_dssp -----------------CTTTTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9678999999999999999999975058889999999999999999
No 147
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=28.16 E-value=14 Score=16.59 Aligned_cols=14 Identities=7% Similarity=0.418 Sum_probs=5.9
Q ss_pred EEEEEECCCCCCCC
Q ss_conf 89999535324677
Q gi|254780588|r 154 VISFIDTAGAYPGV 167 (317)
Q Consensus 154 iv~lvDtpGa~~g~ 167 (317)
+..+++.|-...+.
T Consensus 318 ~~~~~~~~~~~~~~ 331 (566)
T 3fim_B 318 AAFFVNSNQTFDNI 331 (566)
T ss_dssp CEEEESCSCSSGGG
T ss_pred EEEECCCCCCCCHH
T ss_conf 57761688674300
No 148
>3ddo_A Urdpase, upase, uridine phosphorylase; transferase, cytoplasm, glycosyltransferase; 1.50A {Salmonella typhimurium} PDB: 1ryz_A 1sj9_A* 1y1q_A* 1y1s_A 1y1r_A 1zl2_A* 2hn9_A 1y1t_A* 2hsw_A 2hwu_A* 2pga_A* 2hrd_A 3dps_A 3fwp_A* 3c74_A* 2qdk_A 2iq5_A 2oec_A* 2i8a_A 2rj3_A ...
Probab=28.13 E-value=27 Score=14.46 Aligned_cols=76 Identities=25% Similarity=0.288 Sum_probs=50.5
Q ss_pred HHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHH
Q ss_conf 87635002237999862254506722753347897299998875380089998458775023442026776836899999
Q gi|254780588|r 62 QVSRHPNRPHYIDYINSLFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAV 141 (317)
Q Consensus 62 ~~aRh~~Rp~~~dyi~~l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~ 141 (317)
-+.=.|+|-. .|-.+|++..++.-.|. ..+--|+++|++|.|+.+ ||-.|.. .
T Consensus 23 i~~Gdp~Ra~---~ia~~l~~~~~~~~~r~------~~~ytG~~~G~~V~v~~~--------------GiG~~~a----a 75 (253)
T 3ddo_A 23 IVPGDPERVE---KIAALMDKPVKLASHRE------FTSWRAELDGKAVIVCST--------------GIGGPST----S 75 (253)
T ss_dssp EEESCGGGHH---HHHTTSEEEEEEEEETT------EEEEEEEETTEEEEEECC--------------CSSHHHH----H
T ss_pred EECCCHHHHH---HHHHHHCCCEEECCCCC------EEEEEEEECCEEEEEEEC--------------CCCHHHH----H
T ss_conf 9689989999---99997078736502388------489999999999999967--------------8675489----9
Q ss_pred HHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 99999997199489999535324
Q gi|254780588|r 142 RLMEMADRFKIPVISFIDTAGAY 164 (317)
Q Consensus 142 r~~~~A~~f~lPiv~lvDtpGa~ 164 (317)
-.+.....++.-.+-.+-|.|+.
T Consensus 76 i~~~el~~~g~~~iIr~Gt~G~l 98 (253)
T 3ddo_A 76 IAVEELAQLGIRTFLRIGTTGAI 98 (253)
T ss_dssp HHHHHHHHTTCCEEEEEEEECCC
T ss_pred HHHHHHHHCCCCEEEEECCCCCC
T ss_conf 99999876299889996565676
No 149
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=27.97 E-value=18 Score=15.80 Aligned_cols=38 Identities=24% Similarity=0.239 Sum_probs=23.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCC-CCCEEEEEECCCCC
Q ss_conf 4677843002799999998886237-99889999616777
Q gi|254780588|r 164 YPGVDAEARGQGEAIARATEMCLKL-QVPILSIIIGEGGS 202 (317)
Q Consensus 164 ~~g~~aE~~G~~~aia~~l~~~~~~-~vP~i~vv~geg~s 202 (317)
.+|--.+.+|..++ +--|..++.+ .+=+||-++.+++.
T Consensus 143 ~~gGvl~R~GHTEa-avdL~~lAGl~P~avicEil~d~g~ 181 (233)
T 1k4i_A 143 VAGGVRARRGHTEA-GVELCRLAGKRPVAVISEIVDDGQE 181 (233)
T ss_dssp CTTHHHHCCSHHHH-HHHHHHHTTCCSBEEEEEBEECCEE
T ss_pred CCCCCCCCCCHHHH-HHHHHHHCCCCCCEEEEEEEECCCC
T ss_conf 26982688978899-9999998099972899999408986
No 150
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=26.71 E-value=29 Score=14.29 Aligned_cols=30 Identities=23% Similarity=0.145 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 999999999999719948999953532467
Q gi|254780588|r 137 YRKAVRLMEMADRFKIPVISFIDTAGAYPG 166 (317)
Q Consensus 137 ~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g 166 (317)
.....++++.+...+...|+|.||-|.+..
T Consensus 168 ~~~~~~~~~~~~~~Gad~I~l~DT~G~~~P 197 (337)
T 3ble_A 168 PDYVKSLVEHLSKEHIERIFLPDTLGVLSP 197 (337)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEECTTCCCCH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
T ss_conf 899988999998751135203651134786
No 151
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=26.69 E-value=20 Score=15.44 Aligned_cols=23 Identities=22% Similarity=0.358 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 36899999999999971994899
Q gi|254780588|r 134 PEGYRKAVRLMEMADRFKIPVIS 156 (317)
Q Consensus 134 p~g~rKa~r~~~~A~~f~lPiv~ 156 (317)
|.|.-|..-.-.+|++|++|.|+
T Consensus 12 ~PGSGK~T~a~~Lae~~g~~~is 34 (186)
T 3cm0_A 12 PPGAGKGTQASRLAQELGFKKLS 34 (186)
T ss_dssp CTTSCHHHHHHHHHHHHTCEEEC
T ss_pred CCCCCHHHHHHHHHHHHCCEEEC
T ss_conf 99998799999999986990763
No 152
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=26.40 E-value=23 Score=15.03 Aligned_cols=89 Identities=12% Similarity=0.164 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHH-HCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCC
Q ss_conf 2699999888763500223799986-225450672275334789729999887538008999845877502344202677
Q gi|254780588|r 53 SKLTPWQKTQVSRHPNRPHYIDYIN-SLFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGS 131 (317)
Q Consensus 53 ~~Lt~w~~v~~aRh~~Rp~~~dyi~-~l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~ 131 (317)
+|++|.+-.+++++-+ +.++ .-+|.|+-+||..--..- |-...|..=+.+||++.|-| |-.+.
T Consensus 63 s~m~~~~w~~la~~i~-----~~~~~~~~dG~VVtHGTDTm~~T-A~~Ls~~l~~~kPVVlTGaq----------~P~~~ 126 (332)
T 2wlt_A 63 QDMNEEIWFKLAQRAQ-----ELLDDSRIQGVVITHGTDTLEES-AYFLNLVLHSTKPVVLVGAM----------RNASS 126 (332)
T ss_dssp GGCCHHHHHHHHHHHH-----HHHTSTTCCEEEEECCSSSHHHH-HHHHHHHCCCSSCEEEECCS----------SCTTS
T ss_pred HHCCHHHHHHHHHHHH-----HHHCCCCCCEEEEECCCCHHHHH-HHHHHHHHCCCCCEEEECCC----------CCCCC
T ss_conf 4589999999999999-----98405898869997786179999-99999986479977996899----------77666
Q ss_pred CCHHHHHHHHHHHHHHH--HCCCCEEEE
Q ss_conf 68368999999999999--719948999
Q gi|254780588|r 132 PRPEGYRKAVRLMEMAD--RFKIPVISF 157 (317)
Q Consensus 132 ~~p~g~rKa~r~~~~A~--~f~lPiv~l 157 (317)
+..+|.+-..-.+.+|- +...|=|++
T Consensus 127 ~~sDg~~NL~~Av~~A~~~~~~~~gV~v 154 (332)
T 2wlt_A 127 LSADGALNLYEAVSVAVNEKSANKGVLV 154 (332)
T ss_dssp TTCSHHHHHHHHHHHHHCGGGTTSCSEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 7976899999999998373236885699
No 153
>1t0k_B YL32, RP73, 60S ribosomal protein L30; joint and X-RAY refinement, ribosomal protein L30E, MBP fusion protein, ribosome; HET: MTT; 3.24A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=26.20 E-value=22 Score=15.10 Aligned_cols=23 Identities=22% Similarity=0.028 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 99999999997199489999535
Q gi|254780588|r 139 KAVRLMEMADRFKIPVISFIDTA 161 (317)
Q Consensus 139 Ka~r~~~~A~~f~lPiv~lvDtp 161 (317)
...++..+|+..++|++.|..|.
T Consensus 52 ~~~~i~~~~~~~~Vpv~~~~~t~ 74 (105)
T 1t0k_B 52 RKSELEYYAMLSKTKVYYFQGGN 74 (105)
T ss_dssp HHHHHHHHHHHHTCEEEECSSCH
T ss_pred HHHHHHHHHHHCCCCEEEECCCH
T ss_conf 99999999986599819967899
No 154
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=25.79 E-value=30 Score=14.17 Aligned_cols=28 Identities=11% Similarity=0.096 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 3689999999999997199489999535
Q gi|254780588|r 134 PEGYRKAVRLMEMADRFKIPVISFIDTA 161 (317)
Q Consensus 134 p~g~rKa~r~~~~A~~f~lPiv~lvDtp 161 (317)
-.|+.|...+++.|-+++++.||+=--+
T Consensus 30 ~~G~~~l~~ii~~~~~~gI~~lTvYafS 57 (227)
T 2vg0_A 30 RMGAAKIAEMLRWCHEAGIELATVYLLS 57 (227)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 9999999999999998599889999864
No 155
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=25.72 E-value=23 Score=14.94 Aligned_cols=15 Identities=47% Similarity=0.709 Sum_probs=11.4
Q ss_pred EEEEECCCCCCCCCC
Q ss_conf 999953532467784
Q gi|254780588|r 155 ISFIDTAGAYPGVDA 169 (317)
Q Consensus 155 v~lvDtpGa~~g~~a 169 (317)
|+||||||...+...
T Consensus 156 i~lVDTPG~~~~~~~ 170 (550)
T 2qpt_A 156 ISIIDTPGILSGAKQ 170 (550)
T ss_dssp CEEEECCCBCC----
T ss_pred EEEEECCCCCCCCCC
T ss_conf 389737866667651
No 156
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=25.71 E-value=30 Score=14.16 Aligned_cols=16 Identities=13% Similarity=0.268 Sum_probs=12.2
Q ss_pred CCCEEEEEECCCCCCC
Q ss_conf 9948999953532467
Q gi|254780588|r 151 KIPVISFIDTAGAYPG 166 (317)
Q Consensus 151 ~lPiv~lvDtpGa~~g 166 (317)
.+|-++||||||..-.
T Consensus 129 ~l~~l~lvDtPG~~~~ 144 (315)
T 1jwy_B 129 HVVNLTLVDLPGITKV 144 (315)
T ss_dssp TSCSEEEEECCCCC--
T ss_pred CCCCEEEEECCCCCCC
T ss_conf 9875379826875555
No 157
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=25.50 E-value=17 Score=15.89 Aligned_cols=10 Identities=0% Similarity=0.086 Sum_probs=3.9
Q ss_pred EEEECCCCEE
Q ss_conf 0220467401
Q gi|254780588|r 214 VYMLEHAIYS 223 (317)
Q Consensus 214 v~m~~~s~ys 223 (317)
++.+.|+-|.
T Consensus 485 ivV~NN~g~g 494 (573)
T 2iht_A 485 TVVVNNDTNG 494 (573)
T ss_dssp EEEEECSBCH
T ss_pred EEEEECCCCH
T ss_conf 9999799864
No 158
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreductase, porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=25.10 E-value=31 Score=14.09 Aligned_cols=28 Identities=18% Similarity=0.446 Sum_probs=20.5
Q ss_pred EEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 887538008999845877502344202677683689999999999
Q gi|254780588|r 102 LARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEM 146 (317)
Q Consensus 102 ~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~ 146 (317)
|-.+.|++|+|||. | +.++||+..|.+.
T Consensus 26 fl~L~~k~VLVVGg--------------G---~vA~rKi~~Ll~~ 53 (223)
T 3dfz_A 26 MLDLKGRSVLVVGG--------------G---TIATRRIKGFLQE 53 (223)
T ss_dssp EECCTTCCEEEECC--------------S---HHHHHHHHHHGGG
T ss_pred EEECCCCEEEEECC--------------C---HHHHHHHHHHHHC
T ss_conf 89839985999898--------------8---9999999999748
No 159
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC24; HEC1, NDC80, nucleus, mitosis, centromere, cell cycle, microtubule, coiled-coil, coiled coil; 2.88A {Homo sapiens}
Probab=24.64 E-value=8.1 Score=18.22 Aligned_cols=29 Identities=17% Similarity=0.456 Sum_probs=20.1
Q ss_pred HHHHHCCCCEEEECCCCCCCCCCEEEEEEEE
Q ss_conf 9986225450672275334789729999887
Q gi|254780588|r 74 DYINSLFTHFISLAGDRLFGDDPAMQIGLAR 104 (317)
Q Consensus 74 dyi~~l~~df~el~GDr~~~dD~aii~G~a~ 104 (317)
-|+..+..+..+|++| |.-+|.+|.|+-.
T Consensus 190 ~~v~~L~~~Is~l~~~--y~~~~~~~~g~~~ 218 (250)
T 2ve7_C 190 VYVAQLYHQVSKIEWE--YECEPGMVKGIHH 218 (250)
T ss_dssp HHHHHHHHHHHCCEEC--SCCTTTCEEEEC-
T ss_pred HHHHHHHHHHHHHEEE--CCCCCCHHCCEEC
T ss_conf 9999999998760220--4578682134343
No 160
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4
Probab=24.58 E-value=32 Score=14.02 Aligned_cols=93 Identities=18% Similarity=0.244 Sum_probs=51.1
Q ss_pred HHHCCCCC-CHHHHHHHHHHHHHHHHCCCCEEEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 42026776-8368999999999999719948999953532-467784300279999999888623799889999616777
Q gi|254780588|r 125 IKHNFGSP-RPEGYRKAVRLMEMADRFKIPVISFIDTAGA-YPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGGS 202 (317)
Q Consensus 125 ~~~n~G~~-~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa-~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~s 202 (317)
++.++|+. -|.+|=+.+| ++|++.++++|.=-=..|+ -.|.- + + .+... -.|=| +++|+|-+
T Consensus 221 i~g~gG~~~~~~~fl~~lr--~lc~~~g~llI~DEV~tGfGRtG~~----~---a-----~~~~g-v~PDi-v~~gK~l~ 284 (433)
T 1z7d_A 221 IQGEAGVIVPSDNYLQGVY--DICKKYNVLFVADEVQTGLGRTGKL----L---C-----VHHYN-VKPDV-ILLGKALS 284 (433)
T ss_dssp SBSTTTSBCCCTTHHHHHH--HHHHHTTCEEEEECTTTTTTTTSSS----S---G-----GGGGT-CCCSE-EEECGGGG
T ss_pred CCCCCCCCCCCHHHHHHHH--HHHHHHCCEEEEECCCCCCCCCCCC----C---H-----HHHCC-CCCCE-EEECCCCC
T ss_conf 7788898359989999999--9999829899996366688856763----3---5-----76619-98787-87612012
Q ss_pred CCCCCCCC---CCCEE-EEC-CCCEEEE--CHHHHHHH
Q ss_conf 75421133---20002-204-6740121--55442244
Q gi|254780588|r 203 GGAMGIAA---ANFVY-MLE-HAIYSVI--SPEGAASI 233 (317)
Q Consensus 203 GGA~a~~~---~d~v~-m~~-~s~ysvi--sPEg~AsI 233 (317)
||.++++. .+.+. .+. ....++- +|=+||+-
T Consensus 285 gG~~p~~~v~~~~~i~~~~~~~~~~~T~~g~Pla~aaa 322 (433)
T 1z7d_A 285 GGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASIC 322 (433)
T ss_dssp TTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 89877443346199997516888676889985775677
No 161
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=24.18 E-value=23 Score=14.96 Aligned_cols=26 Identities=38% Similarity=0.690 Sum_probs=20.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 975314557899999999999974223
Q gi|254780588|r 1 MRHYLDFEEPISDLEAKIHELKKLSRE 27 (317)
Q Consensus 1 M~~yLdFEkpI~eLe~kI~eL~~~~~~ 27 (317)
|.-|.+||.| ++|.++|.++......
T Consensus 1 ~~~~~~~~~~-e~l~~ki~~~l~~a~k 26 (120)
T 1vq8_F 1 MPVYVDFDVP-ADLEDDALEALEVARD 26 (120)
T ss_dssp -CCSCCSCCC-HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC-HHHHHHHHHHHHHHHH
T ss_conf 9844146797-9999999999999998
No 162
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=23.72 E-value=33 Score=13.91 Aligned_cols=109 Identities=23% Similarity=0.209 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCC----CC---CCCH-------------------HHHHHHHH-HH-HHHHCCC
Q ss_conf 99999999999719948999953532467----78---4300-------------------27999999-98-8862379
Q gi|254780588|r 138 RKAVRLMEMADRFKIPVISFIDTAGAYPG----VD---AEAR-------------------GQGEAIAR-AT-EMCLKLQ 189 (317)
Q Consensus 138 rKa~r~~~~A~~f~lPiv~lvDtpGa~~g----~~---aE~~-------------------G~~~aia~-~l-~~~~~~~ 189 (317)
=|..=.+++|.+|+-.||+. |+==.|-| .. .||+ +.-..-|+ .+ ...+.-+
T Consensus 22 GKs~La~~lA~~~~~eIIs~-DS~QvYk~l~IgTaKp~~~e~~~i~Hhlid~~~p~e~~sv~~f~~~a~~~i~~i~~~~k 100 (316)
T 3foz_A 22 GKTALAIELRKILPVELISV-DSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGR 100 (316)
T ss_dssp CHHHHHHHHHHHSCEEEEEC-CTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHCCCEEEEC-CHHHHHCCCCEEECCCCHHHHHCCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHCCC
T ss_conf 79999999999869979940-26876199987778999999927997774566888755299999999989999996599
Q ss_pred CCEEEEEECCCCCCCCC---CCCCC-----CCE-------EEEC------CCCEEEECHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf 98899996167777542---11332-----000-------2204------674012155442244215601225655420
Q gi|254780588|r 190 VPILSIIIGEGGSGGAM---GIAAA-----NFV-------YMLE------HAIYSVISPEGAASILWRDSSRAAQAAIAM 248 (317)
Q Consensus 190 vP~i~vv~geg~sGGA~---a~~~~-----d~v-------~m~~------~s~ysvisPEg~AsILwkd~~~a~eAAeal 248 (317)
+|+++ ||+|=.+ --+.. |.- ...+ +....-+-|+.++.|-++|..+...|-|..
T Consensus 101 ~pIlV-----GGTglYl~all~g~~~~p~~~~~~r~~~~~~~~~~g~~~l~~~L~~iDp~~a~~i~~nd~~Ri~RAlEv~ 175 (316)
T 3foz_A 101 IPLLV-----GGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVF 175 (316)
T ss_dssp EEEEE-----ESCHHHHHHHHSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHSCTTCHHHHHHHHHHH
T ss_pred CCEEE-----CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 70897-----3517899999829877999997998876543101699999999997399999615966688999999999
Q ss_pred CCCH
Q ss_conf 3884
Q gi|254780588|r 249 KIIA 252 (317)
Q Consensus 249 klTa 252 (317)
..|.
T Consensus 176 ~~tG 179 (316)
T 3foz_A 176 FISG 179 (316)
T ss_dssp HHHS
T ss_pred HHHC
T ss_conf 9617
No 163
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=23.65 E-value=28 Score=14.44 Aligned_cols=64 Identities=14% Similarity=0.080 Sum_probs=39.0
Q ss_pred EEEECCCCCCCCCCCCCCCCEEEECCCCEEEECHHHHHHHHCCCCHH---HHHHHHHCCCCHHHHHHC
Q ss_conf 99961677775421133200022046740121554422442156012---256554203884899978
Q gi|254780588|r 194 SIIIGEGGSGGAMGIAAANFVYMLEHAIYSVISPEGAASILWRDSSR---AAQAAIAMKIIATDLQDL 258 (317)
Q Consensus 194 ~vv~geg~sGGA~a~~~~d~v~m~~~s~ysvisPEg~AsILwkd~~~---a~eAAealklTa~DL~~l 258 (317)
++.+-+|++.|-+++.---.+.-.-..+|+.--+.+...|-|.|+.- |+... ..-|+..|..--
T Consensus 118 ~l~IP~G~aHGf~~L~d~~~i~Y~~s~~y~~~~~~~~~~i~~~Dp~l~i~Wp~~~-~~ilS~kD~~~p 184 (197)
T 1nxm_A 118 SIFVPRGVANGFQVLSDFVAYSYLVNDYWALELKPKYAFVNYADPSLDIKWENLE-EAEVSEADENHP 184 (197)
T ss_dssp EEEECTTEEEEEEECSSEEEEEEEESSCCCGGGGGGCEECCTTCTTSSCCCSCST-TCBCCHHHHTSC
T ss_pred EEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCC-CCEECHHHCCCC
T ss_conf 5893698606888625001777883677483336872357289942388999999-788878893899
No 164
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, cell shape, cell division; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=23.52 E-value=33 Score=13.88 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=25.4
Q ss_pred HHHHCCCCCCHHH----HHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 4420267768368----9999999999997199489999
Q gi|254780588|r 124 RIKHNFGSPRPEG----YRKAVRLMEMADRFKIPVISFI 158 (317)
Q Consensus 124 ~~~~n~G~~~p~g----~rKa~r~~~~A~~f~lPiv~lv 158 (317)
|=+++-|+..-+| +.+...+++.|.+++++.||+=
T Consensus 68 RwAk~~gl~~~~GH~~G~~~l~~ii~~~~~~GI~~LTvY 106 (284)
T 2vg3_A 68 RWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLY 106 (284)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999877997779999999999999999998699789999
No 165
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=23.36 E-value=33 Score=13.86 Aligned_cols=27 Identities=11% Similarity=0.220 Sum_probs=13.3
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 683689999999999997199489999
Q gi|254780588|r 132 PRPEGYRKAVRLMEMADRFKIPVISFI 158 (317)
Q Consensus 132 ~~p~g~rKa~r~~~~A~~f~lPiv~lv 158 (317)
+.+.+.+-+.|+.+...++++|+..+|
T Consensus 231 Pe~~~l~ea~r~~~~l~~~~i~~~gvV 257 (334)
T 3iqw_A 231 PEFLSLYETERMIQELANYGIDTHCIV 257 (334)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 985439999999999997599976799
No 166
>2qvb_A Haloalkane dehalogenase 3; alpha-beta hydrolase protein, X-RAY crystallography, TB structural genomics consortium, TBSGC; 1.19A {Mycobacterium tuberculosis H37RV} PDB: 2o2i_A 2o2h_A
Probab=23.28 E-value=26 Score=14.59 Aligned_cols=73 Identities=14% Similarity=0.070 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC----C-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC
Q ss_conf 836899999999999971994899995353246778----4-30027999999988862379988999961677775421
Q gi|254780588|r 133 RPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGVD----A-EARGQGEAIARATEMCLKLQVPILSIIIGEGGSGGAMG 207 (317)
Q Consensus 133 ~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~~----a-E~~G~~~aia~~l~~~~~~~vP~i~vv~geg~sGGA~a 207 (317)
+...|++.+. .|++.| . |..+|-||.-.... . ...............+..+......+++|- ..||+++
T Consensus 40 ~~~~~~~~~~--~L~~~~--~-vi~~D~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvGh-S~Gg~~a 113 (297)
T 2qvb_A 40 SSYLWRNIMP--HLEGLG--R-LVACDLIGMGASDKLSPSGPDRYSYGEQRDFLFALWDALDLGDHVVLVLH-DWGSALG 113 (297)
T ss_dssp CGGGGTTTGG--GGTTSS--E-EEEECCTTSTTSCCCSSCSTTSSCHHHHHHHHHHHHHHTTCCSCEEEEEE-EHHHHHH
T ss_pred CHHHHHHHHH--HHHCCC--E-EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECC-CCCHHHH
T ss_conf 8789999999--983598--8-99998898888887543443331000235666656775068875469736-6654899
Q ss_pred CCCC
Q ss_conf 1332
Q gi|254780588|r 208 IAAA 211 (317)
Q Consensus 208 ~~~~ 211 (317)
+..+
T Consensus 114 ~~~a 117 (297)
T 2qvb_A 114 FDWA 117 (297)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 167
>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural genomics, joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans}
Probab=23.28 E-value=32 Score=13.96 Aligned_cols=23 Identities=22% Similarity=0.466 Sum_probs=19.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 75314557899999999999974
Q gi|254780588|r 2 RHYLDFEEPISDLEAKIHELKKL 24 (317)
Q Consensus 2 ~~yLdFEkpI~eLe~kI~eL~~~ 24 (317)
++|++....+..+++++++|...
T Consensus 10 ~~~M~ifdkLe~i~~r~~eLe~~ 32 (371)
T 1zbt_A 10 HHHMNIYDQLQAVEDRYEELGEL 32 (371)
T ss_dssp -CCCCHHHHHHHHHHHHHHC---
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 35212999999999999999998
No 168
>2d1p_C TUSB, hypothetical protein YHEL; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.2
Probab=22.90 E-value=32 Score=14.00 Aligned_cols=61 Identities=11% Similarity=0.134 Sum_probs=35.9
Q ss_pred CCCCEEEECCCCEEEECH-HHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCHHHHHH
Q ss_conf 320002204674012155-442244215601225655420388489997899652622889844489899999
Q gi|254780588|r 210 AANFVYMLEHAIYSVISP-EGAASILWRDSSRAAQAAIAMKIIATDLQDLSIIDGIIPEPIGGAHRNPAQTIS 281 (317)
Q Consensus 210 ~~d~v~m~~~s~ysvisP-Eg~AsILwkd~~~a~eAAealklTa~DL~~lGiID~II~EP~GGAHrd~~~~~~ 281 (317)
-.|.++.+++++|..+.- ..+..+. +....+-.=..|+...|+.+.+.+.- ..-|+.++.+
T Consensus 23 ~~D~lLLieDgV~~al~~~~~~~~l~--------~~~~~vy~L~~Dl~ARGl~~~~~~~v---~~Idy~~FV~ 84 (95)
T 2d1p_C 23 EGDELLLLQDGVTAAVDGNRYLESLR--------NAPIKVYALNEDLIARGLTGQISNDI---ILIDYTDFVR 84 (95)
T ss_dssp TTCEEEECGGGGGGGBTTCTTHHHHH--------TSSSEEEEEHHHHHHTTCTTSBCTTS---EEECHHHHHH
T ss_pred CCCEEEEEHHHHHHHHHCCHHHHHHH--------HCCCEEEEEHHHHHHCCCCCCCCCCC---EEECHHHHHH
T ss_conf 99989984887999870786899987--------17986999750598649863258884---7877999999
No 169
>1r48_A Proline/betaine transporter; osmosensor, cytoplasmic, coiled-coil, antiparallel, two- stranded homodimer, transport protein; NMR {Synthetic} SCOP: h.4.15.1
Probab=22.39 E-value=35 Score=13.73 Aligned_cols=14 Identities=29% Similarity=0.418 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780588|r 35 EEIRELEAMVCKTL 48 (317)
Q Consensus 35 ~ei~~Le~k~~~~~ 48 (317)
++|..||.|.+.+.
T Consensus 15 ~qIaeLe~KR~~Lv 28 (33)
T 1r48_A 15 HEIADLQAKRTRLV 28 (33)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999998
No 170
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=22.08 E-value=24 Score=14.83 Aligned_cols=80 Identities=9% Similarity=0.118 Sum_probs=47.0
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCC
Q ss_conf 26999998887635002237999862254506722753347897299998875380089998458775023442026776
Q gi|254780588|r 53 SKLTPWQKTQVSRHPNRPHYIDYINSLFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSP 132 (317)
Q Consensus 53 ~~Lt~w~~v~~aRh~~Rp~~~dyi~~l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~ 132 (317)
+|++|.+-.+++++-.+- .+.-+|.|+=+||..--..-.+ ..-|..-+++||++.|-|+ -.+.+
T Consensus 67 s~~~~~~w~~ia~~i~~~-----~~~~~dG~VVtHGTDTm~~TA~-~Ls~~l~~~kPVVlTGaqr----------P~~~~ 130 (334)
T 3nxk_A 67 SNMCDEIWLRLAKKIAKL-----FAEGIDGVVITHGTDTMEETAY-FLNLTIKSDKPVVLVGAMR----------PSTAI 130 (334)
T ss_dssp GGCCHHHHHHHHHHHHHH-----HHTTCCEEEEECCSTTHHHHHH-HHHHHCCCCSCEEEECCSS----------CTTST
T ss_pred HHCCHHHHHHHHHHHHHH-----HHCCCCEEEEECCCCHHHHHHH-HHHHHHCCCCCEEEECCCC----------CCCCC
T ss_conf 227999999999999976-----5458986999788524999999-9999724799769967888----------77877
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 8368999999999999
Q gi|254780588|r 133 RPEGYRKAVRLMEMAD 148 (317)
Q Consensus 133 ~p~g~rKa~r~~~~A~ 148 (317)
..+|-+-....+.+|-
T Consensus 131 ~sDg~~NL~~Av~~A~ 146 (334)
T 3nxk_A 131 SADGPKNLYNAVALVV 146 (334)
T ss_dssp TCSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
T ss_conf 8528999999999985
No 171
>2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A
Probab=21.95 E-value=35 Score=13.67 Aligned_cols=63 Identities=13% Similarity=0.163 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-C--------CCCHH--HHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 683689999999999997199489999535324677-8--------43002--799999998886237998899996
Q gi|254780588|r 132 PRPEGYRKAVRLMEMADRFKIPVISFIDTAGAYPGV-D--------AEARG--QGEAIARATEMCLKLQVPILSIII 197 (317)
Q Consensus 132 ~~p~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~-~--------aE~~G--~~~aia~~l~~~~~~~vP~i~vv~ 197 (317)
..|+|.++.++ ++.++++.|+|++....=+.... . -+.|- ....+.....++. -.||++.-..
T Consensus 391 I~P~GL~~~L~--~~~~rY~~P~I~ITENG~a~~d~~~~~~~~~i~D~~Ri~yl~~hL~~v~~Ai~-dGv~V~GY~~ 464 (532)
T 2jf7_A 391 VVPWGLYKLLV--YTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAID-DGVNVKGYFV 464 (532)
T ss_dssp ECHHHHHHHHH--HHHHHHCCSCEEEEEECCCEECCTTSCHHHHTCCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEE
T ss_pred ECCHHHHHHHH--HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-CCCCEEEEEE
T ss_conf 68299999999--99987199808996287446787665656774777899999999999999998-7999898701
No 172
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH motif, PSI, protein structure initiative; 1.55A {Archaeoglobus fulgidus dsm 4304} SCOP: a.4.5.50
Probab=21.88 E-value=35 Score=13.66 Aligned_cols=66 Identities=15% Similarity=0.103 Sum_probs=47.4
Q ss_pred HHHCCCCHHHHHHHHHCCCCH-------HHHHHCCCCCEEECCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 442156012256554203884-------89997899652622889844----4898999999999999999998589
Q gi|254780588|r 232 SILWRDSSRAAQAAIAMKIIA-------TDLQDLSIIDGIIPEPIGGA----HRNPAQTISSVGEIISQFLSETSTY 297 (317)
Q Consensus 232 sILwkd~~~a~eAAealklTa-------~DL~~lGiID~II~EP~GGA----Hrd~~~~~~~lk~~i~~~L~~L~~~ 297 (317)
.++-+.+..+.+.|+.++++. ..|.+.|+|-.+..+.-+-. ..++.+..+.+++.+.+.+.++.+.
T Consensus 28 ~L~~~~~~t~~eia~~~~~~~~~v~~~l~~L~~~Glv~r~~~~~~~~~~~~~~~~~~e~l~~i~~~i~~~l~elek~ 104 (109)
T 1sfx_A 28 LLLERGGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEKPEKVLKEFKSSILGEIERIEKM 104 (109)
T ss_dssp HHHHHCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEESSSEEEEEEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99804888799999997567018999999999599979874257886554336680016899999999999999987
No 173
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=21.36 E-value=36 Score=13.59 Aligned_cols=26 Identities=35% Similarity=0.240 Sum_probs=15.9
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCC
Q ss_conf 999999999719948999953532467
Q gi|254780588|r 140 AVRLMEMADRFKIPVISFIDTAGAYPG 166 (317)
Q Consensus 140 a~r~~~~A~~f~lPiv~lvDtpGa~~g 166 (317)
+.+.++.|..-+.-+| ||||+|-.+.
T Consensus 169 ~~~a~~~~~~~~~D~v-lIDTaGR~~~ 194 (297)
T 1j8m_F 169 AKRGVEKFLSEKMEII-IVDTAGRHGY 194 (297)
T ss_dssp HHHHHHHHHHTTCSEE-EEECCCSCCT
T ss_pred HHHHHHHHHHCCCCEE-EECCCCCCCC
T ss_conf 9999999985599889-9548776752
No 174
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=21.33 E-value=36 Score=13.59 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=27.4
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 228898444898999999999999999998589
Q gi|254780588|r 265 IPEPIGGAHRNPAQTISSVGEIISQFLSETSTY 297 (317)
Q Consensus 265 I~EP~GGAHrd~~~~~~~lk~~i~~~L~~L~~~ 297 (317)
|+-|.||-..++..++..+..++...++.|.+-
T Consensus 133 I~DP~~~~~e~f~~~~~~I~~~i~~l~~~L~~e 165 (167)
T 2fek_A 133 IPDPYRKSRETFAAVYTLLERSARQWAQALNAE 165 (167)
T ss_dssp CCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 899998799999999999999999999998767
No 175
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=20.98 E-value=21 Score=15.27 Aligned_cols=81 Identities=9% Similarity=0.135 Sum_probs=47.0
Q ss_pred CCCCHHHHHHHHHCCHHHHHHHHHH-HCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCC
Q ss_conf 2699999888763500223799986-225450672275334789729999887538008999845877502344202677
Q gi|254780588|r 53 SKLTPWQKTQVSRHPNRPHYIDYIN-SLFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGS 131 (317)
Q Consensus 53 ~~Lt~w~~v~~aRh~~Rp~~~dyi~-~l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~ 131 (317)
+|++|-+-++++++-.+ -++ .=+|.|+-+||..--..-.+.+. +..=.++||++.|-| |..+.
T Consensus 68 s~m~~~~w~~la~~I~~-----~~~~~~~dG~VVtHGTDTm~yTA~~Ls-ll~~~~kPVVlTGSq----------rP~~~ 131 (337)
T 4pga_A 68 ESITNDDLLKLGKRVAE-----LADSNDVDGIVITHGTDTLEETAYFLN-LVQKTDKPIVVVGSM----------RPGTA 131 (337)
T ss_dssp GGCCHHHHHHHHHHHHH-----HHHCTTCSEEEEECCSTTHHHHHHHHH-HHCCCCSCEEEECCS----------SCTTS
T ss_pred CCCCHHHHHHHHHHHHH-----HHHCCCCCEEEEECCCCHHHHHHHHHH-HHHCCCCCEEEECCC----------CCCCC
T ss_conf 00799999999999999-----864578876999778434999999999-975579977993688----------88757
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 683689999999999997
Q gi|254780588|r 132 PRPEGYRKAVRLMEMADR 149 (317)
Q Consensus 132 ~~p~g~rKa~r~~~~A~~ 149 (317)
+..+|.+-..-.+.+|-.
T Consensus 132 ~~sDa~~NL~~Av~~A~~ 149 (337)
T 4pga_A 132 MSADGMLNLYNAVAVASN 149 (337)
T ss_dssp TTCSHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHC
T ss_conf 785078899999999837
No 176
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=20.97 E-value=37 Score=13.54 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=22.0
Q ss_pred HHHHH-CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 99997-1994899995353246778430027999999988862379988999961677
Q gi|254780588|r 145 EMADR-FKIPVISFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGEGG 201 (317)
Q Consensus 145 ~~A~~-f~lPiv~lvDtpGa~~g~~aE~~G~~~aia~~l~~~~~~~vP~i~vv~geg~ 201 (317)
.+|.. .+.|||.++-=.+|.-+.. .|......+.|++.||+.-++
T Consensus 432 ~~a~~~~~~~vv~i~GDgsf~~~~~------------~L~ta~~~~lpi~ivV~NN~g 477 (563)
T 2uz1_A 432 QVADLEAGRRTILVTGDGSVGYSIG------------EFDTLVRKQLPLIVIIMNNQS 477 (563)
T ss_dssp HHHHHHHTCEEEEEEEHHHHGGGTT------------HHHHHHHHTCCCEEEEEECSB
T ss_pred HHHCCCCCCEEEEEECCCHHHCCHH------------HHHHHHHHCCCCEEEEEECCC
T ss_conf 6505489973799977704424699------------999999959891899997996
No 177
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*
Probab=20.86 E-value=37 Score=13.52 Aligned_cols=48 Identities=6% Similarity=-0.012 Sum_probs=26.1
Q ss_pred CCEEEEEECCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 948999953532467784-300279999999888623799889999616
Q gi|254780588|r 152 IPVISFIDTAGAYPGVDA-EARGQGEAIARATEMCLKLQVPILSIIIGE 199 (317)
Q Consensus 152 lPiv~lvDtpGa~~g~~a-E~~G~~~aia~~l~~~~~~~vP~i~vv~ge 199 (317)
.|-++||||||..-.... +.......+-..+..+..-....|-+|...
T Consensus 124 ~~~l~lvD~PG~~~~~~~~~~~~~~~~~~~~v~~y~~~~~~~il~v~~a 172 (299)
T 2aka_B 124 VLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPA 172 (299)
T ss_dssp CCSEEEEECCCBCSSCCSSSCTTHHHHHHHHHHHHHTSTTEEEEEEEES
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 8762565257654435678505679999999999853877269999427
No 178
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=20.84 E-value=37 Score=13.52 Aligned_cols=28 Identities=11% Similarity=0.213 Sum_probs=14.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 683689999999999997199489999535
Q gi|254780588|r 132 PRPEGYRKAVRLMEMADRFKIPVISFIDTA 161 (317)
Q Consensus 132 ~~p~g~rKa~r~~~~A~~f~lPiv~lvDtp 161 (317)
..|+.|.+++- ++..+.+--+|.|-.|+
T Consensus 70 ~~~~~~a~~l~--~~i~~~~p~~VL~~~T~ 97 (320)
T 1o97_D 70 FDPDVFEASVS--ALIAAHNPSVVLLPHSV 97 (320)
T ss_dssp CCHHHHHHHHH--HHHHHHCCSEEEEECSH
T ss_pred CCHHHHHHHHH--HHHHHCCCCEEEEECCC
T ss_conf 35477999999--99986389889994354
No 179
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=20.81 E-value=37 Score=13.52 Aligned_cols=36 Identities=39% Similarity=0.478 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 45578999999999999742236667769999999999999
Q gi|254780588|r 6 DFEEPISDLEAKIHELKKLSREDINEDFSEEIRELEAMVCK 46 (317)
Q Consensus 6 dFEkpI~eLe~kI~eL~~~~~~~~~~~~~~ei~~Le~k~~~ 46 (317)
||-|-+.--+++|.+|...-.+. .+||++|..++.+
T Consensus 15 dfakilllkeerikelerrl~ek-----e~eiqelkrklhk 50 (67)
T 1zxa_A 15 DFAKILMLKEERIKELEKRLSEK-----EEEIQELKRKLHK 50 (67)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH
T ss_conf 99999997799999999998733-----8999999999985
No 180
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus HB8} SCOP: c.37.1.8 d.52.3.1
Probab=20.40 E-value=38 Score=13.46 Aligned_cols=10 Identities=50% Similarity=0.793 Sum_probs=5.7
Q ss_pred EEEEECCCCC
Q ss_conf 9999535324
Q gi|254780588|r 155 ISFIDTAGAY 164 (317)
Q Consensus 155 v~lvDtpGa~ 164 (317)
+.|+||||..
T Consensus 57 iv~vDTPGi~ 66 (301)
T 1wf3_A 57 IVFVDTPGLH 66 (301)
T ss_dssp EEEEECCCCC
T ss_pred EEEECCCCCC
T ss_conf 9994589842
No 181
>1q1g_A Uridine phosphorylase putative; transition state complex, transferase; HET: MTI; 2.02A {Plasmodium falciparum 3D7} SCOP: c.56.2.1 PDB: 1nw4_A* 3fow_A*
Probab=20.25 E-value=38 Score=13.44 Aligned_cols=69 Identities=17% Similarity=0.237 Sum_probs=47.2
Q ss_pred HHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 99986225450672275334789729999887538008999845877502344202677683689999999999997199
Q gi|254780588|r 73 IDYINSLFTHFISLAGDRLFGDDPAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKI 152 (317)
Q Consensus 73 ~dyi~~l~~df~el~GDr~~~dD~aii~G~a~i~g~~v~vig~~kG~~~~~~~~~n~G~~~p~g~rKa~r~~~~A~~f~l 152 (317)
-++|..++++..++.--| .+.+--|+++|++|.|+.+ ||-.|...- -+-.++ +++.
T Consensus 30 a~~ia~~le~~~~v~~~R------~~~~~tG~ykG~~V~v~~~--------------GmG~psaai---~~~eL~-~~g~ 85 (276)
T 1q1g_A 30 VDKIKVVCDSYVDLAYNR------EYKSVECHYKGQKFLCVSH--------------GVGSAGCAV---CFEELC-QNGA 85 (276)
T ss_dssp HHHHHTTSSEEEEEEEET------TEEEEEEEETTEEEEEEEC--------------CSSHHHHHH---HHHHHH-TTTC
T ss_pred HHHHHHHHCCCEEEECCC------CEEEEEEEECCEEEEEEEC--------------CCCHHHHHH---HHHHHH-HCCC
T ss_conf 999999818864652038------7699999998999999835--------------645888999---999998-6299
Q ss_pred CEEEEEECCCCCC
Q ss_conf 4899995353246
Q gi|254780588|r 153 PVISFIDTAGAYP 165 (317)
Q Consensus 153 Piv~lvDtpGa~~ 165 (317)
-.|-.+-|.|++-
T Consensus 86 ~~iIriGtaGgl~ 98 (276)
T 1q1g_A 86 KVIIRAGSCGSLQ 98 (276)
T ss_dssp CEEEEEEEEEESC
T ss_pred CEEEEECCCCCCC
T ss_conf 8899935445656
No 182
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=20.16 E-value=38 Score=13.42 Aligned_cols=16 Identities=25% Similarity=0.310 Sum_probs=14.4
Q ss_pred HHHHHHHHCCCCEEEE
Q ss_conf 9999999719948999
Q gi|254780588|r 142 RLMEMADRFKIPVISF 157 (317)
Q Consensus 142 r~~~~A~~f~lPiv~l 157 (317)
-++++|.++++|+++|
T Consensus 59 gl~~~A~~l~~p~~~~ 74 (145)
T 2w6k_A 59 GLRQLATLLERPVHFL 74 (145)
T ss_dssp HHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHCCCEEEE
T ss_conf 9999999939985986
No 183
>3ju2_A Uncharacterized protein SMC04130; structural genomics, PSI-2, TIM barrel protein, protein structure initiative, Zn binding domain; 1.80A {Sinorhizobium meliloti}
Probab=20.06 E-value=38 Score=13.41 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf 689999999999997199489999535324677
Q gi|254780588|r 135 EGYRKAVRLMEMADRFKIPVISFIDTAGAYPGV 167 (317)
Q Consensus 135 ~g~rKa~r~~~~A~~f~lPiv~lvDtpGa~~g~ 167 (317)
+..+...+++++|..++.|+|.+. ||..++.
T Consensus 81 ~~i~~~~~~i~~a~~lG~~~i~~~--~g~~~~~ 111 (284)
T 3ju2_A 81 KAIDDNRRAVDEAAELGADCLVLV--AGGLPGG 111 (284)
T ss_dssp HHHHHHHHHHHHHHHHTBSCEEEE--CBCCCTT
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEC--CCCCCCC
T ss_conf 999999999999999499836956--7986678
Done!