RPSBLAST alignment for GI: 254780588 and conserved domain: TIGR01117

>gnl|CDD|130187 TIGR01117, mmdA, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. Length = 512

 Score = 69.5 bits (170), Expect = 1e-12
 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 12/158 (7%)

Query: 96  PAMQIGLARFHGQPVAIIGQEKGSDTKSRIKHNFGSPRPEGYRKAVRLMEMADRFKIPVI 155
           P +    AR +GQ V II  +         K   G    +   K  R +   D F IP++
Sbjct: 303 PNIITCFARINGQSVGIIANQP--------KVMAGCLDIDSSDKIARFIRFCDAFNIPIV 354

Query: 156 SFIDTAGAYPGVDAEARGQGEAIARATEMCLKLQVPILSIIIGE--GGSGGAMGIA--AA 211
           +F+D  G  PGV+ E  G     A+      +  VP ++II  +  GG+  AM      A
Sbjct: 355 TFVDVPGFLPGVNQEYGGIIRHGAKVLYAYSEATVPKVTIITRKAYGGAYLAMCSKHLGA 414

Query: 212 NFVYMLEHAIYSVISPEGAASILWRDSSRAAQAAIAMK 249
           + VY    A  +V+ P GAA+I++R   + A+   A +
Sbjct: 415 DQVYAWPTAEIAVMGPAGAANIIFRKDIKEAKDPAATR 452