BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780589|ref|YP_003065002.1| hypothetical protein CLIBASIA_02380 [Candidatus Liberibacter asiaticus str. psy62] (239 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|115522169|ref|YP_779080.1| hypothetical protein RPE_0139 [Rhodopseudomonas palustris BisA53] gi|115516116|gb|ABJ04100.1| protein of unknown function DUF949 [Rhodopseudomonas palustris BisA53] Length = 481 Score = 344 bits (882), Expect = 7e-93, Method: Composition-based stats. Identities = 109/234 (46%), Positives = 147/234 (62%), Gaps = 4/234 (1%) Query: 8 LLFALFIFLNGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 ++ A + L GC+ S + KA P+S LI MQ K P ++R+FK E LE Sbjct: 14 VVLAAGVALAGCNSDEISLANNAKANQPVSPKLIAEMQSKDMDLQAPMLVRLFKQEAELE 73 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 +WK+ +Y LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y+LS N Sbjct: 74 VWKQTRSGQYALLKTYPICRWSGDLGPKVREGDRQAPEGFYSISPGQMNPQSAYYLSFNT 133 Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q Q+QA+ Sbjct: 134 GYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESFFG-GQRAFQLQAY 192 Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 PF+MT NM +++NPN FW M+K G+D+FE QEP ++ +YVF T Sbjct: 193 PFKMTPANMARHRSNPNMPFWKMIKEGYDHFEVTRQEPKVEFCEARYVFDPAPT 246 >gi|27375303|ref|NP_766832.1| hypothetical protein blr0192 [Bradyrhizobium japonicum USDA 110] gi|27348439|dbj|BAC45457.1| blr0192 [Bradyrhizobium japonicum USDA 110] Length = 526 Score = 343 bits (881), Expect = 9e-93, Method: Composition-based stats. Identities = 109/241 (45%), Positives = 149/241 (61%), Gaps = 7/241 (2%) Query: 4 RYNILLFALF---IFLNGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 R + AL + L GC S + KA P+ L+ +M +K P ++R+F Sbjct: 12 RALLASVALLTASVLLAGCDTDQVSLATNAKANQPVPPKLLAAMVEKDMDLQSPILVRLF 71 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E LE+WK+ + ++ LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Sbjct: 72 KQEAELEVWKQTRNGQFALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPGQMNPQSA 131 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+LS N G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q Sbjct: 132 YYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESFFG-GQK 190 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 Q+QA+PF+MT NM ++NNPN FW M+K G+D+FE QEP + K+YVF + Sbjct: 191 AFQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKVDFCEKKYVFDAAK 250 Query: 238 T 238 T Sbjct: 251 T 251 >gi|192288940|ref|YP_001989545.1| hypothetical protein Rpal_0510 [Rhodopseudomonas palustris TIE-1] gi|192282689|gb|ACE99069.1| protein of unknown function DUF949 [Rhodopseudomonas palustris TIE-1] Length = 478 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 146/240 (60%), Gaps = 6/240 (2%) Query: 4 RYNILLFALFI--FLNGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 R +L AL L GC+ + + KA P+ L+ +MQ+K P ++R+FK Sbjct: 8 RALMLTAALATMPLLAGCNSDQMALATNAKANQPVPPKLVAAMQEKNMDLQSPILVRLFK 67 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 E LE+WK++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y Sbjct: 68 QEAELEVWKQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSY 127 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 +LS N G+PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Sbjct: 128 YLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESFFG-GQRA 186 Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 Q+QA+PF+MT N ++NNPN FW MLK G+D+FE QEP + +YVF Sbjct: 187 FQLQAYPFKMTPANFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVFDAAPP 246 >gi|209883239|ref|YP_002287096.1| pollen allergen Poa pIX/Phl pVI [Oligotropha carboxidovorans OM5] gi|209871435|gb|ACI91231.1| pollen allergen Poa pIX/Phl pVI [Oligotropha carboxidovorans OM5] Length = 483 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 108/237 (45%), Positives = 150/237 (63%), Gaps = 4/237 (1%) Query: 4 RYNILLFALF--IFLNGCHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R ++ AL + L GC+ S KA P+ E L+ M+ K P ++R+FK E Sbjct: 8 RALMVSAALATSVLLAGCNGDTLSRSAKANKPIPEKLLSDMEAKNMDKGSPMLVRLFKQE 67 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 LE+WK++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y+L Sbjct: 68 AELEVWKQDRSGRFALLKTYPICRWSGDLGPKIREGDRQAPEGFYSITPAQMNPASAYYL 127 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 S N+G+PN +D+A RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q+ Q Sbjct: 128 SFNMGYPNAYDRAWGRTGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESFFG-GQTAFQ 186 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 +QA+PFRMT +NM +++NPN +FW MLK G+D FE EP + + K+YVF Sbjct: 187 VQAYPFRMTPQNMARHRDNPNMAFWRMLKEGNDIFEVTRTEPKVDVCEKKYVFDAEP 243 >gi|39933586|ref|NP_945862.1| hypothetical protein RPA0509 [Rhodopseudomonas palustris CGA009] gi|39647432|emb|CAE25953.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 491 Score = 342 bits (877), Expect = 3e-92, Method: Composition-based stats. Identities = 110/240 (45%), Positives = 147/240 (61%), Gaps = 6/240 (2%) Query: 4 RYNILLFALFI--FLNGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 R +L AL L GC+ + + KA P+S L+ +MQ+K P ++R+FK Sbjct: 21 RALMLTAALATMPLLAGCNSDQMALATNAKANQPVSPKLVAAMQEKNMDLQSPILVRLFK 80 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 E LE+WK++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y Sbjct: 81 QEAELEVWKQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSY 140 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 +LS N G+PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Sbjct: 141 YLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESFFG-GQRA 199 Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 Q+QA+PF+MT N ++NNPN FW MLK G+D+FE QEP + +YVF Sbjct: 200 FQLQAYPFKMTPVNFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVFDAAPP 259 >gi|316931931|ref|YP_004106913.1| putative transcriptional regulatory protein [Rhodopseudomonas palustris DX-1] gi|315599645|gb|ADU42180.1| putative exported protein; putative transcriptional regulatory protein at C-terminal [Rhodopseudomonas palustris DX-1] Length = 477 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 147/240 (61%), Gaps = 6/240 (2%) Query: 4 RYNILLFALFI--FLNGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 R ++ AL L GC+ + + KA P+ L+ +MQ+K P ++R+FK Sbjct: 8 RALLVTAALATMPLLAGCNSDQMALATNAKASQPVPPKLVAAMQEKNMDLQSPILVRLFK 67 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 E LE+WK++ + LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y Sbjct: 68 QEAELEVWKQDRTGVFQLLKSYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSY 127 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 +LS N G+PN FDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Sbjct: 128 YLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESFFG-GQRA 186 Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 Q+QA+PF+MT N ++NNPN FW MLK G+D+FE QEP + ++YVF Sbjct: 187 FQLQAYPFKMTPANFAKHRNNPNMPFWKMLKQGYDHFEVTRQEPKVDFCEQKYVFDAAPP 246 >gi|90422051|ref|YP_530421.1| hypothetical protein RPC_0527 [Rhodopseudomonas palustris BisB18] gi|90104065|gb|ABD86102.1| protein of unknown function DUF949 [Rhodopseudomonas palustris BisB18] Length = 477 Score = 341 bits (874), Expect = 6e-92, Method: Composition-based stats. Identities = 108/240 (45%), Positives = 146/240 (60%), Gaps = 6/240 (2%) Query: 4 RYNILLFALF--IFLNGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 R + AL + L GC+ S + KA P+ L+ MQ K P ++R+FK Sbjct: 8 RALVTSVALATGVMLAGCNSDEISLANNAKANQPVPPKLVAEMQTKDMDLQAPMLVRLFK 67 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 E LE+WK+ ++ LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y Sbjct: 68 QEAELEVWKQTRSGQFALLKTYPICRWSGDLGPKVREGDRQAPEGFYNITPAQMNPQSAY 127 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 +LS N G+PN FDKA RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q Sbjct: 128 YLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESFFG-GQRA 186 Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 Q+QA+PF+MT NM ++NNPN FW M+K G+D+FE QEP ++ +YVF Sbjct: 187 FQLQAYPFKMTPVNMAKHRNNPNMPFWKMIKEGYDHFEVTRQEPKVEFCEAKYVFDPATP 246 >gi|148258745|ref|YP_001243330.1| transcriptional regulator [Bradyrhizobium sp. BTAi1] gi|146410918|gb|ABQ39424.1| putative exported protein of unknown function with transcriptiona regulatory protein domain (C-term) [Bradyrhizobium sp. BTAi1] Length = 494 Score = 340 bits (873), Expect = 8e-92, Method: Composition-based stats. Identities = 107/247 (43%), Positives = 149/247 (60%), Gaps = 10/247 (4%) Query: 1 MTNRYNILLFALFIFL------NGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHP 51 M NR + + L GC+ + + KA P+ L+ ++ +K P Sbjct: 1 MINRAFVRVLMTSAALAAGALLTGCNSDQVALATSAKANQPVPPKLVATIAEKDMDTQSP 60 Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 ++R+FK E LE+WK++ ++ LLK Y IC WSG GPK+ GD QAPEGFY I + Sbjct: 61 ILVRVFKQEAELEVWKQDRSGKFALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQ 120 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171 +NP S Y+LS N G+PN FDKA RTG+ LM+HG+C+S GC+AM ++Q+ EIYA+ R+S Sbjct: 121 MNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCFAMTDEQIAEIYALGRESF 180 Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231 G Q Q QA+PFRMT NM ++NNPN FW M+K G+D+FE QEP + K+Y Sbjct: 181 FG-GQRAFQFQAYPFRMTPMNMARHRNNPNMPFWRMIKEGYDHFEVTRQEPKVDFCEKKY 239 Query: 232 VFFKGQT 238 VF + Sbjct: 240 VFNAQKP 246 >gi|110635389|ref|YP_675597.1| hypothetical protein Meso_3060 [Mesorhizobium sp. BNC1] gi|110286373|gb|ABG64432.1| protein of unknown function DUF949 [Chelativorans sp. BNC1] Length = 439 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 111/237 (46%), Positives = 147/237 (62%), Gaps = 3/237 (1%) Query: 1 MTNRYNILLFALFIFLNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 M +R+ + L GC S AE L + ++ K S P ++R+FK Sbjct: 10 MKSRFACAVLLPAFILVGCSGSLEDLAPKAAERKLPPEVTEIIKAKGMSTNAPIMMRVFK 69 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 E +LE+WK+ D Y L+K Y+IC WSG GPK GD QAPEGFY I +NPNS Y Sbjct: 70 EEGVLEVWKQKKDGRYDLVKSYEICKWSGKLGPKYTEGDRQAPEGFYTIRPQQMNPNSSY 129 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 LS NIGFPN +D+A+ RTG LM+HG C+SAGCY+M ++Q++EIYA RD+ RG Q Sbjct: 130 HLSFNIGFPNAYDRANGRTGQHLMVHGACSSAGCYSMTDEQVEEIYAFARDAFRG-GQEA 188 Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 Q QAFPFRMT++NM Y+N+PNY FW MLK G+D+FE P + + +YVF + Sbjct: 189 FQFQAFPFRMTAQNMARYRNDPNYPFWQMLKEGYDHFEMTKAPPKVDVCEARYVFNR 245 >gi|85713798|ref|ZP_01044788.1| hypothetical protein NB311A_04639 [Nitrobacter sp. Nb-311A] gi|85699702|gb|EAQ37569.1| hypothetical protein NB311A_04639 [Nitrobacter sp. Nb-311A] Length = 491 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 147/240 (61%), Gaps = 6/240 (2%) Query: 4 RYNILLFALF--IFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 R + L AL L GC+ + + KA P+ L+ +M K P +IR+FK Sbjct: 8 RAIMTLAALTGGTLLAGCNTDDASLASNAKANRPVPPKLVAAMTAKDMELQSPILIRLFK 67 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 E LE+WK++ ++ LLK Y IC WSG GPK GD QAPEGFY I +NP S Y Sbjct: 68 QEAELEVWKQDRSGKFALLKIYPICRWSGDLGPKTREGDRQAPEGFYSITPAQMNPRSSY 127 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 +LS N G+PNEFDK+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Sbjct: 128 YLSFNTGYPNEFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYAVGRESFFG-GQRA 186 Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 Q+QA+PFRMT+ N+ ++NNPN FW M+K G+D+FE QEP + +YVF Sbjct: 187 FQLQAYPFRMTAANLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPKVAFCEHKYVFDPAPP 246 >gi|299132837|ref|ZP_07026032.1| pollen allergen Poa PIX/Phl PVI [Afipia sp. 1NLS2] gi|298592974|gb|EFI53174.1| pollen allergen Poa PIX/Phl PVI [Afipia sp. 1NLS2] Length = 475 Score = 338 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 109/244 (44%), Positives = 149/244 (61%), Gaps = 8/244 (3%) Query: 1 MTNRYNI------LLFALFIFLNGCHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTV 53 M NR I A L GC+ + KA P+ E L+ M+ K P + Sbjct: 1 MINRSLIRALMVSAALATGTLLAGCNGENLAQSAKATKPIPEKLLAEMEAKNMDKGSPIL 60 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 +R+FK E+ LE+WK++ + LLK Y IC WSG GPKI GD Q PEGFY I +N Sbjct: 61 VRLFKQESELEVWKQDRSGRFALLKTYAICRWSGDLGPKIREGDRQTPEGFYSITPGQMN 120 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173 P S Y+LS N+G+PN +D+A RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Sbjct: 121 PASAYYLSFNMGYPNAYDRAWGRTGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESFFG 180 Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 Q+ Q+QA+PFRMT +NM Y++NPN FW MLK G+D FE EP + + +K+YVF Sbjct: 181 -GQTAFQVQAYPFRMTPQNMAKYRDNPNMPFWRMLKEGNDIFEVTKTEPKVDVCDKKYVF 239 Query: 234 FKGQ 237 Sbjct: 240 DAEP 243 >gi|153008240|ref|YP_001369455.1| hypothetical protein Oant_0905 [Ochrobactrum anthropi ATCC 49188] gi|151560128|gb|ABS13626.1| protein of unknown function DUF949 [Ochrobactrum anthropi ATCC 49188] Length = 412 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 149/241 (61%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M R IL + L GC S L +AE PL E ++ M+ K + P ++RIF Sbjct: 1 MKIRTAILGSVMATALLAGCQGSSVSDLSLRAEKPLPEKVVAKMKAKGMTRTSPIMVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E LE+WK+ + +Y + Y IC WSG GPK GD QAPEGFY + +NPNS Sbjct: 61 KEEGTLEVWKQKNNGKYDQIASYDICKWSGKLGPKYIEGDRQAPEGFYNVRPAQMNPNSS 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+LS NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLSFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+++PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 DFQIQAFPFRMTAANMARYKSDPNYSFWKMLKQGYDSFEVTKVPPKVDVCEKRYVFNVAT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|146337733|ref|YP_001202781.1| putative exported protein transcriptiona regulatory protein at C-terminal [Bradyrhizobium sp. ORS278] gi|146190539|emb|CAL74541.1| conserved hypothetical protein; putative exported protein; putative transcriptiona regulatory protein at C-terminal [Bradyrhizobium sp. ORS278] Length = 501 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 103/225 (45%), Positives = 142/225 (63%), Gaps = 4/225 (1%) Query: 17 NGCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73 GC+ + + KA P+ L+ ++ +K P ++R+FK E LE+WK++ + Sbjct: 35 TGCNSDQVALATSAKANQPVPPKLVAAIAEKDMDTQSPILVRVFKQEAELEVWKQDRSGK 94 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133 + LLK Y IC WSG GPK+ GD QAPEGFY I + +NP S Y+LS N G+PN FDKA Sbjct: 95 FALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKA 154 Query: 134 HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM 193 RTG+ LM+HG+C+S GC+AM ++Q+ EIYA+ R+S G Q Q QA+PFRMT NM Sbjct: 155 LGRTGSQLMVHGDCSSRGCFAMTDEQIAEIYALGRESFFG-GQRAFQFQAYPFRMTPVNM 213 Query: 194 QLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 ++NNPN FW M+K G+D FE QEP + K+YVF + Sbjct: 214 ARHRNNPNMPFWRMIKEGYDAFEVTRQEPKVDFCEKKYVFNAQKP 258 >gi|75674589|ref|YP_317010.1| hypothetical protein Nwi_0391 [Nitrobacter winogradskyi Nb-255] gi|74419459|gb|ABA03658.1| Protein of unknown function [Nitrobacter winogradskyi Nb-255] Length = 492 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 106/227 (46%), Positives = 144/227 (63%), Gaps = 4/227 (1%) Query: 15 FLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71 L GC+ + + KA P+S L+ +M K P +IR+FK E LE+WK++ Sbjct: 21 LLAGCNTDDASLASNAKANRPVSPKLVAAMTAKDMELQSPILIRLFKQEAELEVWKQDRS 80 Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131 ++ LLK Y IC WSG GPK GD QAPEGFY I +NP S Y+LS N G+PNEFD Sbjct: 81 GKFALLKSYPICRWSGDLGPKTREGDRQAPEGFYSITPAQMNPRSSYYLSFNTGYPNEFD 140 Query: 132 KAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191 K+ RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Q+QA+PFRMT+ Sbjct: 141 KSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYAVGRESFFG-GQRAFQLQAYPFRMTAA 199 Query: 192 NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 N+ ++NNPN FW M+K G+D+FE QEP + ++YVF Sbjct: 200 NLAKHRNNPNMPFWKMIKEGNDHFEVTRQEPKVAFCERKYVFDPAPP 246 >gi|118592084|ref|ZP_01549478.1| hypothetical protein SIAM614_25447 [Stappia aggregata IAM 12614] gi|118435380|gb|EAV42027.1| hypothetical protein SIAM614_25447 [Stappia aggregata IAM 12614] Length = 424 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 107/241 (44%), Positives = 150/241 (62%), Gaps = 5/241 (2%) Query: 3 NRYNILLFALFI--FLNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 R + AL + L C + +KA+ P+S ++ M S P +IRIFK Sbjct: 23 RRTARIGAALLLAGVLVACQGDEFSAGPNKAQLPVSASIKRKMNDLNMSSSSPIMIRIFK 82 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 E+ LE+WK+ +Y LL E++IC WSG GPK + GD QAPEGFY I +NPNS Y Sbjct: 83 EESALEVWKQTRTGKYQLLDEFEICKWSGELGPKFKEGDRQAPEGFYEITPALMNPNSSY 142 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 L+ N+G+PN +D+AH RTG+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G Q Sbjct: 143 HLAFNLGYPNSYDRAHGRTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKG-GQRS 201 Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 Q+QAFPFRMT +NM ++++ + FW MLK G+D+FE P I + K+YVF Sbjct: 202 FQVQAFPFRMTPENMARHRDSEHMEFWQMLKTGYDHFEVTQTPPQISVCEKKYVFDATTL 261 Query: 239 I 239 + Sbjct: 262 V 262 >gi|91974778|ref|YP_567437.1| hypothetical protein RPD_0298 [Rhodopseudomonas palustris BisB5] gi|91681234|gb|ABE37536.1| protein of unknown function DUF949 [Rhodopseudomonas palustris BisB5] Length = 487 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 103/224 (45%), Positives = 138/224 (61%), Gaps = 4/224 (1%) Query: 18 GCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 GC+ S + KA P+ L+ MQ K P ++R+FK E LE+WK++ + Sbjct: 24 GCNSDQMSLATNAKANQPVPPKLVAEMQAKNMDLQSPILVRLFKQEAELEVWKQDRTGVF 83 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134 LLK Y IC WSG GPK+ GD QAPEGFY I +NP S Y+LS N G+PN FDK+ Sbjct: 84 ALLKSYPICRWSGDLGPKVREGDRQAPEGFYAISPGQMNPQSSYYLSFNTGYPNAFDKSL 143 Query: 135 NRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ 194 RTG+ LM+HG+C+S GCYAM ++Q+ EIY++ R+S G Q Q+QA+PF+MT N Sbjct: 144 GRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESFFG-GQRAFQLQAYPFKMTPVNFA 202 Query: 195 LYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 ++NNPN FW MLK G+D+FE QEP + +YVF Sbjct: 203 KHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVFDAAPP 246 >gi|239833077|ref|ZP_04681406.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239825344|gb|EEQ96912.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 417 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 113/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M R IL L L GC S L +AE PL E ++ M+ K + P ++RIF Sbjct: 1 MKIRTAILGSLLATTLLAGCQGSSVSDLSLRAEKPLPEKVVAKMKAKGMTRTSPIMVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NPNS Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPNSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+++PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 DFQIQAFPFRMTAANMARYKSDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVST 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|92116107|ref|YP_575836.1| hypothetical protein Nham_0486 [Nitrobacter hamburgensis X14] gi|91799001|gb|ABE61376.1| protein of unknown function DUF949 [Nitrobacter hamburgensis X14] Length = 502 Score = 334 bits (858), Expect = 5e-90, Method: Composition-based stats. Identities = 106/234 (45%), Positives = 144/234 (61%), Gaps = 4/234 (1%) Query: 8 LLFALFIFLNGCHHSRSLID---KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 + A FL GC+ + + + KA P+ L+ +M +K P +IR+FK E LE Sbjct: 29 AVLASGAFLAGCNGNDASLASNAKANQPVPPKLVAAMTEKDMELQSPILIRLFKQEAELE 88 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 +WK+N ++ LLK Y IC WSG GPK GD QAPEGFY I +NP S Y+LS N Sbjct: 89 VWKQNRSGKFALLKTYPICRWSGDLGPKTREGDRQAPEGFYSISPAQMNPRSAYYLSFNT 148 Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 G+PN FDK+ RTG++LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Q QA+ Sbjct: 149 GYPNAFDKSLGRTGSELMVHGDCSSRGCYAMTDEQIAEIYALGRESFFG-GQHAFQFQAY 207 Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 PF MT N+ ++NNPN FW M+K G D+FE HQ P ++ +YVF Sbjct: 208 PFHMTPVNLAKHRNNPNMPFWKMIKEGSDHFEVTHQAPKVEFCEHKYVFDPAPP 261 >gi|86747657|ref|YP_484153.1| hypothetical protein RPB_0531 [Rhodopseudomonas palustris HaA2] gi|86570685|gb|ABD05242.1| Protein of unknown function DUF949 [Rhodopseudomonas palustris HaA2] Length = 485 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 106/224 (47%), Positives = 140/224 (62%), Gaps = 4/224 (1%) Query: 18 GCHH---SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 GC+ S + KA P+ L+ +MQ K P ++R+FK E LE+WK++ Y Sbjct: 24 GCNSDQMSLARNAKANQPVPPKLVAAMQDKNMDLQSPILVRLFKQEAELEVWKQDRSGVY 83 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134 LLK Y IC WSG GPKI GD QAPEGFY I +NP S Y+LS N G+PN FDK+ Sbjct: 84 ALLKTYPICRWSGDLGPKIREGDRQAPEGFYSISPGQMNPQSSYYLSFNTGYPNAFDKSL 143 Query: 135 NRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ 194 RTG+ LM+HG+C+S GCYAM ++Q+ EIYA+ R+S G Q Q+QA+PF+MT N Sbjct: 144 GRTGSQLMVHGDCSSRGCYAMTDEQIAEIYALGRESFFG-GQRAFQLQAYPFKMTPVNFA 202 Query: 195 LYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 ++NNPN FW MLK G+D+FE QEP + ++YVF Sbjct: 203 KHRNNPNMPFWRMLKQGYDHFEVTRQEPKVDFCEQKYVFDAAPP 246 >gi|148560248|ref|YP_001259845.1| putative lipoprotein [Brucella ovis ATCC 25840] gi|148371505|gb|ABQ61484.1| putative lipoprotein [Brucella ovis ATCC 25840] Length = 403 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQIAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|254500364|ref|ZP_05112515.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] gi|222436435|gb|EEE43114.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] Length = 410 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 104/243 (42%), Positives = 151/243 (62%), Gaps = 5/243 (2%) Query: 1 MTNRYNILLFALFI--FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56 M R + A+ + L GC S +K + P+S ++ M P +IRI Sbjct: 20 MYKRACTRVAAVLLAGVLVGCQADDFASGPNKHKAPVSASIKRKMADLNMPSTSPIMIRI 79 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 FK E+ LE+WK+ ++ LL+E++IC WSG GPK + GD QAPEGFY + +NPNS Sbjct: 80 FKEESELEVWKQTRTGKFKLLEEFEICKWSGKLGPKFKEGDRQAPEGFYEVTPALMNPNS 139 Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176 Y L+ N+GFPN +D+AH RTG+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G Sbjct: 140 SYHLAFNLGFPNRYDQAHGRTGSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKG-GA 198 Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 Q+QAFPFRMT +N+ + ++ + +FW MLK G+D+FE + P I + K+YVF Sbjct: 199 RSFQVQAFPFRMTPENLAKHYDSQHLAFWKMLKTGYDHFEVTNTPPAISVCEKKYVFDAT 258 Query: 237 QTI 239 + Sbjct: 259 PLV 261 >gi|254718078|ref|ZP_05179889.1| hypothetical protein Bru83_00779 [Brucella sp. 83/13] gi|265983029|ref|ZP_06095764.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306839702|ref|ZP_07472504.1| lipoprotein [Brucella sp. NF 2653] gi|264661621|gb|EEZ31882.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306405162|gb|EFM61439.1| lipoprotein [Brucella sp. NF 2653] Length = 403 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|23502881|ref|NP_699008.1| putative lipoprotein [Brucella suis 1330] gi|161619949|ref|YP_001593836.1| hypothetical protein BCAN_A2079 [Brucella canis ATCC 23365] gi|163844053|ref|YP_001628457.1| hypothetical protein BSUIS_A1874 [Brucella suis ATCC 23445] gi|254705037|ref|ZP_05166865.1| hypothetical protein Bsuib36_14174 [Brucella suis bv. 3 str. 686] gi|260567495|ref|ZP_05837965.1| pollen allergen Poa pIX/Phl pVI [Brucella suis bv. 4 str. 40] gi|261755738|ref|ZP_05999447.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|306842842|ref|ZP_07475482.1| lipoprotein [Brucella sp. BO2] gi|23348910|gb|AAN30923.1| lipoprotein, putative [Brucella suis 1330] gi|161336760|gb|ABX63065.1| protein of unknown function DUF949 [Brucella canis ATCC 23365] gi|163674776|gb|ABY38887.1| protein of unknown function DUF949 [Brucella suis ATCC 23445] gi|260157013|gb|EEW92093.1| pollen allergen Poa pIX/Phl pVI [Brucella suis bv. 4 str. 40] gi|261745491|gb|EEY33417.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|306287036|gb|EFM58547.1| lipoprotein [Brucella sp. BO2] Length = 403 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|62290878|ref|YP_222671.1| lipoprotein [Brucella abortus bv. 1 str. 9-941] gi|82700790|ref|YP_415364.1| hypothetical protein BAB1_2034 [Brucella melitensis biovar Abortus 2308] gi|189025093|ref|YP_001935861.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus S19] gi|237816386|ref|ZP_04595379.1| lipoprotein [Brucella abortus str. 2308 A] gi|254690167|ref|ZP_05153421.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 6 str. 870] gi|254694658|ref|ZP_05156486.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 3 str. Tulya] gi|254696283|ref|ZP_05158111.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 2 str. 86/8/59] gi|254731200|ref|ZP_05189778.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 4 str. 292] gi|256258421|ref|ZP_05463957.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus bv. 9 str. C68] gi|260546140|ref|ZP_05821880.1| pollen allergen Poa pIX/Phl pVI [Brucella abortus NCTC 8038] gi|260755706|ref|ZP_05868054.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260758931|ref|ZP_05871279.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260760653|ref|ZP_05872996.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884733|ref|ZP_05896347.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261214982|ref|ZP_05929263.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297247263|ref|ZP_06930981.1| lipoprotein [Brucella abortus bv. 5 str. B3196] gi|62197010|gb|AAX75310.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941] gi|82616891|emb|CAJ11990.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella melitensis biovar Abortus 2308] gi|189020665|gb|ACD73387.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus S19] gi|237788453|gb|EEP62668.1| lipoprotein [Brucella abortus str. 2308 A] gi|260096247|gb|EEW80123.1| pollen allergen Poa pIX/Phl pVI [Brucella abortus NCTC 8038] gi|260669249|gb|EEX56189.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260671085|gb|EEX57906.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675814|gb|EEX62635.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260874261|gb|EEX81330.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260916589|gb|EEX83450.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297174432|gb|EFH33779.1| lipoprotein [Brucella abortus bv. 5 str. B3196] Length = 403 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|225626415|ref|ZP_03784454.1| lipoprotein [Brucella ceti str. Cudo] gi|225853467|ref|YP_002733700.1| hypothetical protein BMEA_A2093 [Brucella melitensis ATCC 23457] gi|254700667|ref|ZP_05162495.1| hypothetical protein Bsuib55_07398 [Brucella suis bv. 5 str. 513] gi|254713560|ref|ZP_05175371.1| hypothetical protein BcetM6_09439 [Brucella ceti M644/93/1] gi|254716085|ref|ZP_05177896.1| hypothetical protein BcetM_06566 [Brucella ceti M13/05/1] gi|256060001|ref|ZP_05450183.1| hypothetical protein Bneo5_06551 [Brucella neotomae 5K33] gi|256112359|ref|ZP_05453280.1| hypothetical protein Bmelb3E_06696 [Brucella melitensis bv. 3 str. Ether] gi|256158530|ref|ZP_05456424.1| hypothetical protein BcetM4_06709 [Brucella ceti M490/95/1] gi|256253944|ref|ZP_05459480.1| hypothetical protein BcetB_06546 [Brucella ceti B1/94] gi|256263053|ref|ZP_05465585.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|256370432|ref|YP_003107943.1| lipoprotein, putative [Brucella microti CCM 4915] gi|260169444|ref|ZP_05756255.1| hypothetical protein BruF5_14024 [Brucella sp. F5/99] gi|261217853|ref|ZP_05932134.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261221084|ref|ZP_05935365.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261321297|ref|ZP_05960494.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261323975|ref|ZP_05963172.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261751175|ref|ZP_05994884.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261758969|ref|ZP_06002678.1| pollen allergen Poa pIX/Phl pVI [Brucella sp. F5/99] gi|265993794|ref|ZP_06106351.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|265997044|ref|ZP_06109601.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|225618072|gb|EEH15115.1| lipoprotein [Brucella ceti str. Cudo] gi|225641832|gb|ACO01746.1| protein of unknown function DUF949 [Brucella melitensis ATCC 23457] gi|256000595|gb|ACU48994.1| lipoprotein, putative [Brucella microti CCM 4915] gi|260919668|gb|EEX86321.1| conserved hypothetical protein [Brucella ceti B1/94] gi|260922942|gb|EEX89510.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261293987|gb|EEX97483.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261299955|gb|EEY03452.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261738953|gb|EEY26949.1| pollen allergen Poa pIX/Phl pVI [Brucella sp. F5/99] gi|261740928|gb|EEY28854.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|262551512|gb|EEZ07502.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|262764775|gb|EEZ10696.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263092929|gb|EEZ17104.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|326410029|gb|ADZ67094.1| putative lipoprotein [Brucella melitensis M28] gi|326539745|gb|ADZ87960.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 403 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|17986322|ref|NP_538956.1| hypothetical protein BMEI0038 [Brucella melitensis bv. 1 str. 16M] gi|256045634|ref|ZP_05448512.1| hypothetical protein Bmelb1R_14110 [Brucella melitensis bv. 1 str. Rev.1] gi|260562938|ref|ZP_05833424.1| pollen allergen Poa pIX/Phl pVI [Brucella melitensis bv. 1 str. 16M] gi|265992057|ref|ZP_06104614.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|17981907|gb|AAL51220.1| hypothetical protein BMEI0038 [Brucella melitensis bv. 1 str. 16M] gi|260152954|gb|EEW88046.1| pollen allergen Poa pIX/Phl pVI [Brucella melitensis bv. 1 str. 16M] gi|263003123|gb|EEZ15416.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] Length = 403 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 110/241 (45%), Positives = 149/241 (61%), Gaps = 4/241 (1%) Query: 1 MTNRYNIL-LFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L GC S L +AE PL + ++ MQ K P ++RIF Sbjct: 1 MKIKTALLCSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMPRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|86359412|ref|YP_471304.1| hypothetical protein RHE_CH03829 [Rhizobium etli CFN 42] gi|86283514|gb|ABC92577.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 410 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 114/246 (46%), Positives = 161/246 (65%), Gaps = 9/246 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M R+ + + + L GC+ + + +K E PL +++ +M K P Sbjct: 1 MRIRHFAYVSLMALALAGCNDTLETAQVDLSKVKNKVEQPLPPHILNAMAAKGMDRNSPI 60 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYELTRANL 120 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D + RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ + Sbjct: 121 NPNSKYYLAINTGFPNRYDAVNGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G QS +Q+QAFPFRMT++NM ++ +PNY FW MLK+G+D FE + P + + K+YV Sbjct: 181 G-GQSTVQLQAFPFRMTAENMVKHRLDPNYDFWKMLKVGYDNFEVTKRPPEVNVCEKKYV 239 Query: 233 FFKGQT 238 F + T Sbjct: 240 FNQQAT 245 >gi|306843460|ref|ZP_07476061.1| lipoprotein [Brucella sp. BO1] gi|306276151|gb|EFM57851.1| lipoprotein [Brucella sp. BO1] Length = 403 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVST 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|254780589|ref|YP_003065002.1| hypothetical protein CLIBASIA_02380 [Candidatus Liberibacter asiaticus str. psy62] gi|254040266|gb|ACT57062.1| hypothetical protein CLIBASIA_02380 [Candidatus Liberibacter asiaticus str. psy62] Length = 239 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 239/239 (100%), Positives = 239/239 (100%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE Sbjct: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL Sbjct: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ Sbjct: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI Sbjct: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 >gi|218462567|ref|ZP_03502658.1| hypothetical protein RetlK5_25260 [Rhizobium etli Kim 5] Length = 265 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M R+ + + + L GC+ + + +K E PL +++ +M K P Sbjct: 1 MRIRHFAYVSLIALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ + Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YV Sbjct: 181 G-GQATVQLQAFPFRMTAENMVKHRLDSNYEFWKMLKVGYDNFEVTKRPPEVNVCEKKYV 239 Query: 233 FFKGQT 238 F + T Sbjct: 240 FNQQAT 245 >gi|294851264|ref|ZP_06791937.1| hypothetical protein BAZG_00164 [Brucella sp. NVSL 07-0026] gi|294819853|gb|EFG36852.1| hypothetical protein BAZG_00164 [Brucella sp. NVSL 07-0026] Length = 403 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 111/241 (46%), Positives = 151/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGFY + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFYTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANERTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|209551176|ref|YP_002283093.1| hypothetical protein Rleg2_3600 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536932|gb|ACI56867.1| protein of unknown function DUF949 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 409 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M RY + + + L GC+ + + +K E PL +++ +M K P Sbjct: 1 MRIRYFAYVSLMALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ + Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G Q+ +Q+QAFPFRMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YV Sbjct: 181 G-GQATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 239 Query: 233 FFKGQT 238 F + T Sbjct: 240 FNQQAT 245 >gi|116254089|ref|YP_769927.1| hypothetical protein RL4356 [Rhizobium leguminosarum bv. viciae 3841] gi|115258737|emb|CAK09843.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 430 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 112/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M R+ + + + L+GC+ + + +K E PL +++ M K P Sbjct: 23 MRIRHFAYISLMALALSGCNDALETAQVDLSKVKNKVEQPLPSHILAQMSAKGMDRNSPI 82 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL Sbjct: 83 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYELTRANL 142 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ + Sbjct: 143 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 202 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G Q+ +Q+QAFPFRMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YV Sbjct: 203 G-GQATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 261 Query: 233 FFKGQT 238 F + T Sbjct: 262 FNQQAT 267 >gi|190893666|ref|YP_001980208.1| hypothetical protein RHECIAT_CH0004100 [Rhizobium etli CIAT 652] gi|190698945|gb|ACE93030.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 408 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M R+ + + + L GC+ + + +K E PL +++ +M K P Sbjct: 1 MRIRHFAYVSLIALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ + Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YV Sbjct: 181 G-GQATVQLQAFPFRMTAENMVKHRLDSNYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 239 Query: 233 FFKGQT 238 F + T Sbjct: 240 FNQQVT 245 >gi|327188715|gb|EGE55914.1| hypothetical protein RHECNPAF_800017 [Rhizobium etli CNPAF512] Length = 408 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 113/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M R+ + + + L GC+ + + +K E PL +++ +M K P Sbjct: 1 MRIRHFAYVSLIALALTGCNDALETAQIDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI 60 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ + Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YV Sbjct: 181 G-GQATVQLQAFPFRMTAENMVKHRLDSNYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYV 239 Query: 233 FFKGQT 238 F + T Sbjct: 240 FNQQVT 245 >gi|158424938|ref|YP_001526230.1| hypothetical protein AZC_3314 [Azorhizobium caulinodans ORS 571] gi|158331827|dbj|BAF89312.1| protein of unknown function [Azorhizobium caulinodans ORS 571] Length = 425 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 112/218 (51%), Positives = 146/218 (66%), Gaps = 2/218 (0%) Query: 19 CHHSRS-LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 C+ + + KA PLS +I M +K +P +P +IR+FK E LE+WK D Y LL Sbjct: 28 CNGQGNDVSAKANQPLSPKMISLMSEKDMAPQNPILIRVFKEEAELEVWKAKNDGSYALL 87 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 K Y IC WSG GPK++ GD QAPEGFY I +NPNS Y+LSIN GFPN FDK+ RT Sbjct: 88 KTYPICRWSGELGPKVKIGDRQAPEGFYMITPGLMNPNSSYYLSINTGFPNAFDKSWGRT 147 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197 G LMIHG+C+SAGCYAM ++Q+ EI+A+ R++ G Q QIQA PFRMT +N+ ++ Sbjct: 148 GEFLMIHGDCSSAGCYAMTDEQIAEIFALAREAFAG-GQRAFQIQAMPFRMTPQNLARHR 206 Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 NNPN +FW LK G+D+FE EP + + N+QYVF Sbjct: 207 NNPNMAFWRNLKQGYDHFEVTKHEPKVNVCNRQYVFDA 244 >gi|227823257|ref|YP_002827229.1| putative periplasmic protein, putative exported protein [Sinorhizobium fredii NGR234] gi|227342258|gb|ACP26476.1| putative periplasmic protein, putative exported protein [Sinorhizobium fredii NGR234] Length = 469 Score = 328 bits (840), Expect = 5e-88, Method: Composition-based stats. Identities = 108/242 (44%), Positives = 159/242 (65%), Gaps = 8/242 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS-------RSLIDKAEHPLSENLIISMQKKRTSPFHPTV 53 M R ++ A+ L GC + S+ +K E+ LS ++ M + P + Sbjct: 1 MRFRNLVITTAIAAGLAGCTNETLDSVNLSSVKNKTEYQLSSKMVSKMSELGMQKTSPIL 60 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 +RIFK E LE+WK N + + LLK YKICAWSG GPK++ GD QAPEGFY + + +N Sbjct: 61 LRIFKEEGTLEVWKANTSSRFQLLKSYKICAWSGKLGPKVKEGDRQAPEGFYPLYPHQMN 120 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173 PNS Y+L+IN GFPN +DKA+ R+G LMIHG C+S+GCY+M ++Q+ EI+A+ RD+ +G Sbjct: 121 PNSNYYLAINTGFPNAYDKANGRSGTHLMIHGACSSSGCYSMTDEQIIEIFALARDAFKG 180 Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 Q +Q+QAFP+RMT++NM +++NPN FW MLK+G+D FE + P + + ++YVF Sbjct: 181 -GQESVQLQAFPYRMTAENMARHRDNPNIEFWKMLKVGYDQFEVTKRPPQVNVCERKYVF 239 Query: 234 FK 235 + Sbjct: 240 NQ 241 >gi|328541957|ref|YP_004302066.1| transcriptional regulatory protein [polymorphum gilvum SL003B-26A1] gi|326411707|gb|ADZ68770.1| Putative transcriptional regulatory protein [Polymorphum gilvum SL003B-26A1] Length = 452 Score = 328 bits (840), Expect = 6e-88, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 140/222 (63%), Gaps = 1/222 (0%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 G S K P+S + M P +IRIFK E+ LE+WK+ + Y LL Sbjct: 30 GDEFSLGSGPKHLRPVSAEVKHKMTDLGMDVSSPIMIRIFKEESQLEVWKQAKNGRYALL 89 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 + ++IC WSG GPKI+ GD QAPEGFY I +NPNS Y L+ N+G+PN FD++H RT Sbjct: 90 QTFEICKWSGELGPKIKEGDRQAPEGFYEITPALMNPNSSYHLAFNLGYPNAFDRSHGRT 149 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197 G+ LM+HG C+S GCYAM ++Q+Q+IYA+ RDS +G Q Q+QAFPFRMT +NM ++ Sbjct: 150 GSHLMVHGACSSRGCYAMTDEQVQDIYALARDSFKG-GQRSFQVQAFPFRMTPENMARHR 208 Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 +N + FW MLK G+D+FE P + + ++YV+ + Sbjct: 209 HNQHIDFWRMLKAGYDHFEVTKLPPKVDVCERKYVYDATSIV 250 >gi|241206579|ref|YP_002977675.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860469|gb|ACS58136.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 408 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 112/246 (45%), Positives = 161/246 (65%), Gaps = 9/246 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M R+ + + + L+GC+ + + +K E PL +++ M K P Sbjct: 1 MRIRHFAYISLMALALSGCNDALETAQVDLSKVKNKVEQPLPSHILAQMSAKGMDRNSPI 60 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QAPEGFY + NL Sbjct: 61 MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL 120 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D A+ R+G+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ + Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRSGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + P + + K+YV Sbjct: 181 G-GQATVQLQAFPFRMTAENMVKHRLDGNYDFWKMLKVGYDNFEVTKRPPEVNVCEKKYV 239 Query: 233 FFKGQT 238 F + T Sbjct: 240 FNQQAT 245 >gi|154244467|ref|YP_001415425.1| hypothetical protein Xaut_0510 [Xanthobacter autotrophicus Py2] gi|154158552|gb|ABS65768.1| protein of unknown function DUF949 [Xanthobacter autotrophicus Py2] Length = 450 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 102/218 (46%), Positives = 140/218 (64%), Gaps = 1/218 (0%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 +A PL+ ++ + +K SP P ++RIFK E LE+WK D + LLK Sbjct: 35 QTDSEASRRANKPLTPEMVSLIAQKDMSPASPILVRIFKQEAELEVWKATSDGSFALLKT 94 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139 Y IC WSG GPK+ GD QAPEGFY I +NPNS Y+LS N+GFPN FD+++ RTG Sbjct: 95 YPICRWSGELGPKVSMGDRQAPEGFYTITPGQMNPNSSYYLSFNLGFPNAFDRSYGRTGE 154 Query: 140 DLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNN 199 LM+HG+C+SAGCYAM ++Q+ EI+++ R+S G Q Q+QA+PFRMT KN+ ++NN Sbjct: 155 FLMVHGDCSSAGCYAMTDEQISEIFSLARESFAG-GQRAFQVQAYPFRMTPKNLARHRNN 213 Query: 200 PNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 PN +FW LK G+D+FE Q P + + + YVF Sbjct: 214 PNMAFWRNLKQGYDHFEVTKQVPKVNVCGRSYVFDAEP 251 >gi|332716420|ref|YP_004443886.1| hypothetical protein AGROH133_11965 [Agrobacterium sp. H13-3] gi|325063105|gb|ADY66795.1| hypothetical protein AGROH133_11965 [Agrobacterium sp. H13-3] Length = 475 Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats. Identities = 107/243 (44%), Positives = 155/243 (63%), Gaps = 9/243 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M + LL + L+GC+ + + +K ++PLS +++ + KK P Sbjct: 44 MRLTHFALLACTALILSGCNDTLETVERDVSHVKNKVDYPLSPSILAEIDKKNMDRTSPI 103 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E LEIWK D + + EY+ICAWSG GPK++ GD QAPEGFY + +L Sbjct: 104 MIRIFKEEGALEIWKAKRDNRFDKIAEYQICAWSGKLGPKVKEGDRQAPEGFYNLTPAHL 163 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D A+ R G +LMIHG C+S+GCY+M + Q+ EIY RD+ + Sbjct: 164 NPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYGFARDAFK 223 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G Q +Q+QAFPFRMT++NM ++ + + FW MLK+G+D FE + P + + K+YV Sbjct: 224 G-GQKTVQLQAFPFRMTAENMARHRQSEHLDFWKMLKVGYDNFEVTKRPPEVNVCEKKYV 282 Query: 233 FFK 235 F + Sbjct: 283 FNQ 285 >gi|254707445|ref|ZP_05169273.1| hypothetical protein BpinM_10862 [Brucella pinnipedialis M163/99/10] gi|254709013|ref|ZP_05170824.1| hypothetical protein BpinB_01867 [Brucella pinnipedialis B2/94] gi|256030538|ref|ZP_05444152.1| hypothetical protein BpinM2_07792 [Brucella pinnipedialis M292/94/1] gi|261314933|ref|ZP_05954130.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261316511|ref|ZP_05955708.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|265987585|ref|ZP_06100142.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|261295734|gb|EEX99230.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261303959|gb|EEY07456.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|264659782|gb|EEZ30043.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 403 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 110/241 (45%), Positives = 150/241 (62%), Gaps = 4/241 (1%) Query: 1 MTNRYNILLFALFI-FLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M + +L L L GC S L +AE PL + ++ MQ K + P ++RIF Sbjct: 1 MKIKTALLGSILATALLAGCQGSSVSDLAMRAEKPLPQKIVAKMQAKGMTRTSPILVRIF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E +LE+WK+ + +Y + Y+IC WSG GPK GD QAPEGF + +NP+S Sbjct: 61 KEEGVLEVWKQKNNGKYDQIASYEICKWSGKLGPKYIEGDRQAPEGFCTVRPAQMNPHSN 120 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y+L+ NIGFPN +D+A+ RTG LM+HG C+S+GCY+M ++Q+ EIYA RD+ +G Q Sbjct: 121 YYLAFNIGFPNAYDRANGRTGQHLMVHGACSSSGCYSMTDEQVAEIYAFGRDAFKG-GQR 179 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 QIQAFPFRMT+ NM Y+N+PNYSFW MLK G+D FE P + + K+YVF Sbjct: 180 EFQIQAFPFRMTAANMTRYKNDPNYSFWKMLKQGYDAFETTKVPPKVDVCEKRYVFNVPT 239 Query: 238 T 238 Sbjct: 240 P 240 >gi|217976362|ref|YP_002360509.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2] gi|217501738|gb|ACK49147.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2] Length = 449 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 98/222 (44%), Positives = 139/222 (62%), Gaps = 3/222 (1%) Query: 18 GCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 GC + S+ +A P+ + M++K T+P P +IR +K E+ LE+WK D +Y Sbjct: 26 GCEDAGLNSISARANAPVPAETVALMKEKGTTPDAPVLIRTYKKESELEVWKMKADGKYA 85 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 LLK Y +C WSG GPK GD Q PEGFY I + PNS Y+L+ N+G+PN +D+A Sbjct: 86 LLKTYPVCRWSGQLGPKTREGDRQVPEGFYSITPAQMKPNSAYYLAFNVGYPNAYDRALG 145 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 R G +M+HG C+SAGC++M + Q+ EIYA+VRD G Q IQ+Q++PFRMT++NM Sbjct: 146 RDGGAIMVHGICSSAGCFSMTDPQIGEIYALVRDGFSG-GQREIQMQSYPFRMTAENMAK 204 Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 Y+ +PN FW LK G D FE Q+ + + +K+YVF Sbjct: 205 YRADPNIGFWKQLKEGSDNFEVTKQQVAVGVCSKRYVFNAEP 246 >gi|319781235|ref|YP_004140711.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167123|gb|ADV10661.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 432 Score = 324 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 102/229 (44%), Positives = 144/229 (62%), Gaps = 3/229 (1%) Query: 9 LFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 + + + GC++S +A PL + ++ M+ K + RIFK E LEIW Sbjct: 10 ILIAALGVAGCNNSSMKDFAPEANKPLPDKILADMRAKGMVRTSSVMARIFKEEGKLEIW 69 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 K + Y ++ Y IC WSG GPK GD QAPEGFY + +NP S Y LS NIG+ Sbjct: 70 KAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPAQMNPRSNYHLSFNIGY 129 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN +D+A+ RTG++LM+HG C+S+GCY+M + Q+++IYA RD+ +G Q+ QIQAFPF Sbjct: 130 PNAYDRANGRTGSNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQG-GQTEFQIQAFPF 188 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 RMT+ NM Y+N+PNY FW MLK+G+D FE P + + K+YVF + Sbjct: 189 RMTAANMARYRNDPNYDFWKMLKVGYDNFEITKVPPKVDVCEKRYVFNQ 237 >gi|110346930|ref|YP_665748.1| hypothetical protein Meso_4116 [Mesorhizobium sp. BNC1] gi|110283041|gb|ABG61101.1| protein of unknown function DUF949 [Chelativorans sp. BNC1] Length = 335 Score = 324 bits (830), Expect = 8e-87, Method: Composition-based stats. Identities = 103/228 (45%), Positives = 152/228 (66%), Gaps = 2/228 (0%) Query: 9 LFALFIFLNGCHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67 + AL +FL+ C + + KA P+ L+ M +K SP P ++RIFK E+ LE+WK Sbjct: 11 IAALALFLSACVSTVLDVDGKATRPIPAALVADMSRKSMSPSAPVLVRIFKQESELEVWK 70 Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127 R+ ++ LLK Y +C WSG GPK + GD QAPEGFY++ LNPNS+Y+LS N+G+P Sbjct: 71 RDRSGKFALLKTYPMCRWSGKLGPKKQNGDRQAPEGFYHVSARMLNPNSQYYLSFNLGYP 130 Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187 N + A TG LM+HG C+S+GC+A+ ++ + EIYA+ R++L+G Q Q+QAFPFR Sbjct: 131 NRLEAALGYTGEALMVHGACSSSGCFALTDEGVAEIYAVAREALKG-GQGSFQVQAFPFR 189 Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 MT +NM +N+PN++FW+ LKLG+D FE ++P + +YVF + Sbjct: 190 MTPQNMAKNRNDPNFAFWSDLKLGYDIFEVTRRQPKVSYCEGRYVFDR 237 >gi|307942526|ref|ZP_07657874.1| pollen allergen Poa pIX/Phl pVI [Roseibium sp. TrichSKD4] gi|307774165|gb|EFO33378.1| pollen allergen Poa pIX/Phl pVI [Roseibium sp. TrichSKD4] Length = 408 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 100/222 (45%), Positives = 137/222 (61%), Gaps = 2/222 (0%) Query: 19 CHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 C K + P+ + M + P +IRIFK E+ LE+WK+ Y LL Sbjct: 38 CQADELGYGPKHKRPVDSTIKRKMTELGMRSTSPIMIRIFKQESELEVWKQARGGRYKLL 97 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 + ++IC WSG GPK + GD QAPEGFY I + +NP S Y L+ N+G+PN FD+AH RT Sbjct: 98 ETFEICKWSGELGPKFKEGDRQAPEGFYEIMPSLMNPKSSYHLAFNLGYPNRFDRAHGRT 157 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197 G+ LM+HG C+S GCYAM +KQ+Q+IYA+ RDS +G Q Q+QAFPFRMT +NM + Sbjct: 158 GSHLMVHGACSSRGCYAMTDKQVQDIYALARDSFKG-GQRSFQVQAFPFRMTPENMAKNR 216 Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + FW MLK+G+D+FE P I + K+YVF + Sbjct: 217 ESEHMDFWRMLKVGYDHFELTKVPPKISVCEKKYVFDATPLV 258 >gi|222087383|ref|YP_002545920.1| hypothetical protein Arad_4240 [Agrobacterium radiobacter K84] gi|221724831|gb|ACM27987.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 434 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 107/243 (44%), Positives = 156/243 (64%), Gaps = 9/243 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------RSLIDKAEHPLSENLIISMQKKRTSPFHPT 52 M R+ + + + L GC+ + + +K E PL + ++ M KK P Sbjct: 1 MRIRHLAYMSLMALALAGCNDALDTASIDLSKVKNKVEQPLPDRILADMTKKGMDRNSPI 60 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +IRIFK E +EI K N + + ++ Y ICAWSG GPK++ GD QAPEGFY + NL Sbjct: 61 MIRIFKEEGTMEILKANQNNRFEVIASYSICAWSGRLGPKVKEGDRQAPEGFYNLTPANL 120 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 NPNSKY+L+IN GFPN +D A+ R+G +LMIHG C+S+GCY+M ++Q+ EIYA RD+ + Sbjct: 121 NPNSKYYLAINTGFPNRYDAANGRSGNNLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK 180 Query: 173 GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYV 232 G Q IQ++AFPFRMT++NM ++ + N FW MLK+G+D FE + P +++ K+YV Sbjct: 181 G-GQKTIQLEAFPFRMTAENMVKHRLSSNIEFWKMLKVGYDNFEVTKRPPEVEVCEKKYV 239 Query: 233 FFK 235 F + Sbjct: 240 FNQ 242 >gi|90420211|ref|ZP_01228119.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90335545|gb|EAS49295.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 378 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 105/221 (47%), Positives = 149/221 (67%), Gaps = 3/221 (1%) Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 ++ C + L AE PL L+ +++ P ++R++K E+ LE+WK+ D Y Sbjct: 64 VSACQYEDLLP--AEAPLPAALVQAIKSNGMGVKSPILVRLYKEESDLEVWKQKTDGTYA 121 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 LLK Y+ICAWSG GPK + GD QAPEGFY + LNPNS Y L++N+G+PN +D+A+ Sbjct: 122 LLKTYEICAWSGKLGPKKQEGDRQAPEGFYTVTPAQLNPNSNYHLALNMGYPNTYDRANG 181 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 RTG+ LMIHG C S+GCYAM+++Q+QEIY++ R S G Q QIQA+PFRMT KNM Sbjct: 182 RTGSHLMIHGSCNSSGCYAMDDEQVQEIYSLARHSFEG-GQRAFQIQAYPFRMTPKNMAR 240 Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 ++N+ +Y FW MLK G DYFE Q+P + + +++YVF + Sbjct: 241 HRNSEHYDFWKMLKKGSDYFEMTRQQPNVGVCDRRYVFDQS 281 >gi|298292760|ref|YP_003694699.1| hypothetical protein Snov_2792 [Starkeya novella DSM 506] gi|296929271|gb|ADH90080.1| conserved hypothetical protein [Starkeya novella DSM 506] Length = 593 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 1/221 (0%) Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVL 76 G + K LS + + +K S P V+RIFK E+ LE+WK+ +Y L Sbjct: 34 TGDDGPSPMSAKGTKSLSPQTVALIGEKGMSRTSPIVVRIFKEESELEVWKQTTSGDYAL 93 Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136 LK Y IC WSG GPK++ GD QAPEGFY + +NPNS+Y+LS ++G+PN FD++ R Sbjct: 94 LKTYPICRWSGELGPKVKEGDRQAPEGFYTVTPGQMNPNSQYYLSFDLGYPNAFDRSLGR 153 Query: 137 TGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY 196 TGA+LM+HG+C S GCYAM ++Q+QE++A+ R+S G Q Q+QA+PFRMT++NM + Sbjct: 154 TGANLMVHGDCTSRGCYAMTDEQVQEVFALGRESFMG-GQRSFQVQAYPFRMTAENMVRH 212 Query: 197 QNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 +NNPN +FW M+K G D FE P + K+YVF Sbjct: 213 RNNPNLAFWKMIKEGSDTFEVTKAPPKVDFCAKRYVFNATP 253 >gi|150397767|ref|YP_001328234.1| hypothetical protein Smed_2569 [Sinorhizobium medicae WSM419] gi|150029282|gb|ABR61399.1| protein of unknown function DUF949 [Sinorhizobium medicae WSM419] Length = 481 Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 8/242 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHS-------RSLIDKAEHPLSENLIISMQKKRTSPFHPTV 53 M R IL A+ L GC + S+ +K E+ LS ++ M++ P + Sbjct: 9 MRFRNLILTVAVAAALAGCTNETLDSVNLSSVKNKTEYQLSGKMVSKMRELGMQKTSPIL 68 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 +RIFK E LE+WK N + LLK YKICAWSG GPK++ GD QAPEGFY + LN Sbjct: 69 LRIFKEEGTLEVWKANTANRFQLLKSYKICAWSGKLGPKVKEGDRQAPEGFYPLYPRQLN 128 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173 PNS Y+L+IN G+PN +DKA+ RTG LMIHG C+S+GCY+M ++Q+ EI+A+ RD+ +G Sbjct: 129 PNSSYYLAINTGYPNTYDKANGRTGTHLMIHGACSSSGCYSMTDEQIIEIFALARDAFKG 188 Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 Q +Q+QAFPFRMT++NM +++NPN FW MLK+G+D FE + P + + ++YVF Sbjct: 189 -GQESVQLQAFPFRMTAENMARHRDNPNIDFWKMLKVGYDQFEVTKRPPAVNVCERKYVF 247 Query: 234 FK 235 + Sbjct: 248 NQ 249 >gi|114705348|ref|ZP_01438256.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Fulvimarina pelagi HTCC2506] gi|114540133|gb|EAU43253.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Fulvimarina pelagi HTCC2506] Length = 329 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 103/234 (44%), Positives = 143/234 (61%), Gaps = 1/234 (0%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R F + + AE PL L+ ++ P ++R+FK E+ Sbjct: 4 RRLLTGAFLATALFTATSCKYADLLPAEAPLPAALVAQIRANSMGVNSPMLVRLFKEESE 63 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 LE+WK+ D Y LK Y ICAWSG GPK GD QAPEGFY + LNPNS Y L+I Sbjct: 64 LEVWKQRTDGTYAHLKTYPICAWSGKLGPKFAEGDRQAPEGFYNVNPTQLNPNSSYHLAI 123 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 N+G+PN +D+A+ RTG+ LMIHG C S+GCYAM++ Q+QEIY + R S G Q + QIQ Sbjct: 124 NMGYPNTYDRANGRTGSHLMIHGSCNSSGCYAMDDVQVQEIYGLARHSFEG-GQRNFQIQ 182 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 A+PFRMT +NM + N+ +Y+FW MLK G DYFE+ + P + + +++Y+F + Sbjct: 183 AYPFRMTPQNMARHSNSEHYAFWTMLKKGSDYFEQTRKPPHVGVCDRRYIFDQS 236 >gi|260461662|ref|ZP_05809909.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|259032732|gb|EEW33996.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] Length = 432 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 102/232 (43%), Positives = 143/232 (61%), Gaps = 3/232 (1%) Query: 9 LFALFIFLNGCHHSR--SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 + I + GC+ S +A PL + ++ M+ K + RIFK E LEIW Sbjct: 10 VLVASIAIAGCNDSSMKDFAPEANKPLPDKILADMKAKGMVRTSSVMARIFKEEGKLEIW 69 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 K + Y ++ Y IC WSG GPK GD QAPEGFY + + +NP S Y LS NIGF Sbjct: 70 KAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFYTVRPSQMNPRSNYHLSFNIGF 129 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN +D+A+ RTG +LM+HG C+S+GCY+M + Q+++IYA RD+ +G Q+ Q++AFPF Sbjct: 130 PNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYAFGRDAFQG-GQTEFQVEAFPF 188 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 RMT+ NM Y+N+PNY FW MLK+G+D FE P + + K+YVF + Sbjct: 189 RMTAANMARYRNDPNYEFWKMLKVGYDNFEITKVPPKVDVCEKRYVFNQVAP 240 >gi|15966436|ref|NP_386789.1| lipoprotein [Sinorhizobium meliloti 1021] gi|307300526|ref|ZP_07580306.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C] gi|307318391|ref|ZP_07597826.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83] gi|15075707|emb|CAC47262.1| Hypothetical protein signal peptide [Sinorhizobium meliloti 1021] gi|306896073|gb|EFN26824.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83] gi|306904692|gb|EFN35276.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C] Length = 480 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 106/213 (49%), Positives = 148/213 (69%), Gaps = 1/213 (0%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 S+ +K E+ LS ++ M++ P ++RIFK E LE+WK N + LLK YKI Sbjct: 30 SSVKNKTEYQLSSKMVSKMRELGMQKTSPILLRIFKEEGTLEVWKANTANRFQLLKSYKI 89 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM 142 CAWSG GPK++ GD QAPEGFY + N +NPNS Y+L+IN G+PN +DKA+ RTG LM Sbjct: 90 CAWSGKLGPKMKEGDRQAPEGFYPLYPNQMNPNSSYYLAINTGYPNTYDKANGRTGTHLM 149 Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNY 202 IHG C+SAGCY+M N+Q+ EI+A+ RD+ +G Q +Q+QAFPFRMT++NM +++NPN Sbjct: 150 IHGACSSAGCYSMTNEQIIEIFALARDAFKG-GQESVQLQAFPFRMTAENMARHRDNPNI 208 Query: 203 SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 FW MLK G+D FE + P + + ++YVF + Sbjct: 209 EFWKMLKAGYDQFEVTKRPPAVNVCERKYVFNQ 241 >gi|304394155|ref|ZP_07376078.1| lipoprotein [Ahrensia sp. R2A130] gi|303293595|gb|EFL87972.1| lipoprotein [Ahrensia sp. R2A130] Length = 345 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 104/232 (44%), Positives = 149/232 (64%), Gaps = 2/232 (0%) Query: 5 YNILLFALFIFLNGCHHSRS-LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 L + L+GC + + L KA P+ + L+ M+ K + P ++RIFK EN L Sbjct: 2 LLASLAVTGLVLSGCQDNLAGLDTKASVPVPQKLVRQMKAKNMATNAPIMVRIFKQENTL 61 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123 EIWK+ + Y +L +Y+IC WSG GPK + GD QAPEGFY + +NP S+Y L+ N Sbjct: 62 EIWKKTRNGRYAMLADYEICKWSGKLGPKFKEGDRQAPEGFYNVTPALMNPRSQYHLAFN 121 Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 +GFPN +D++H RTG LM+HG C+SAGCYAM ++Q++ IYA+ RD+ +G Q QIQA Sbjct: 122 MGFPNAYDRSHGRTGTHLMVHGACSSAGCYAMTDQQVEVIYALARDAFKG-GQKGFQIQA 180 Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 FPFRMT +NM ++N ++++W MLK GHD+FE P + + K+Y F Sbjct: 181 FPFRMTEENMVANRDNQHFAYWQMLKKGHDHFEITKVPPKVDVCEKRYEFNT 232 >gi|163759951|ref|ZP_02167035.1| hypothetical protein HPDFL43_17011 [Hoeflea phototrophica DFL-43] gi|162282909|gb|EDQ33196.1| hypothetical protein HPDFL43_17011 [Hoeflea phototrophica DFL-43] Length = 398 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 100/229 (43%), Positives = 151/229 (65%), Gaps = 2/229 (0%) Query: 10 FALFIFLNGCHHS-RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 L + L GC + S+ +K EHPL L+ M+ S P ++RIFK E +LE+WK+ Sbjct: 1 MLLVVGLVGCQDALDSVSNKVEHPLPSKLVNKMKANDMSTRSPIMMRIFKEEGVLEVWKQ 60 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 + Y ++ Y+IC WSG GPK + GD QAPEG+Y I +NPNS Y+LS N+GFPN Sbjct: 61 KGNGRYDIIAAYEICKWSGVLGPKFKEGDRQAPEGYYRIYPAQMNPNSSYYLSFNMGFPN 120 Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188 +D++HNRTG++LM+HG C+SAGCY+M ++Q+ EIY RD+ +G Q + ++A PFRM Sbjct: 121 SYDRSHNRTGSNLMVHGACSSAGCYSMTDEQVLEIYGFARDAFKG-GQEYFLVEALPFRM 179 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 T +NM ++++ ++ FW MLK G+D+FE + P +++ + YVF + Sbjct: 180 TPENMARHRDSEHFEFWKMLKTGYDHFELTKRPPKVEVCERSYVFNQVP 228 >gi|254472222|ref|ZP_05085622.1| conserved hypothetical protein [Pseudovibrio sp. JE062] gi|211958505|gb|EEA93705.1| conserved hypothetical protein [Pseudovibrio sp. JE062] Length = 389 Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats. Identities = 102/217 (47%), Positives = 146/217 (67%), Gaps = 1/217 (0%) Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78 C + +K + P+S++L M+ K P ++R+FK E+ LE+WK+ EY LL+ Sbjct: 28 CQGTEFGAEKHQQPVSKSLSNRMKSKDMELKSPIMVRLFKQESELEVWKQTKSGEYALLE 87 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138 + IC WSG GPK + GD QAPEGFY + +NP S Y+LS N+GFPN+FD+AH+RTG Sbjct: 88 TFDICKWSGKLGPKFKEGDRQAPEGFYEVTPGLMNPFSSYYLSFNLGFPNKFDRAHDRTG 147 Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198 ++LM+HG C+S GCYAM ++Q+ +IYA+ RDS G Q Q+QAFPFRMT +NM + Sbjct: 148 SNLMVHGACSSRGCYAMTDEQIADIYALGRDSFLG-GQRKFQVQAFPFRMTPENMAKNAS 206 Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + +Y FW MLK G+D+FE + P I++ +K+YVF Sbjct: 207 SEHYEFWRMLKRGYDHFEVTKRPPAIEVCDKKYVFNA 243 >gi|220924463|ref|YP_002499765.1| hypothetical protein Mnod_4595 [Methylobacterium nodulans ORS 2060] gi|219949070|gb|ACL59462.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 524 Score = 318 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 99/215 (46%), Positives = 134/215 (62%), Gaps = 1/215 (0%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 + + P+ + + M K S P +IR +K E+ +E+WKR D Y LLK Sbjct: 26 GFAGGGSTRHLQPIPQKTLALMSTKGMSAGDPILIRAYKKESEMEVWKRGSDGRYALLKT 85 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139 + IC WSG GPKI GD QAPEGFY I +NPNS Y+LS + GFPN FD+A+ RTG Sbjct: 86 FPICRWSGQLGPKIRQGDRQAPEGFYTITPGQMNPNSSYYLSFDTGFPNAFDRANGRTGT 145 Query: 140 DLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNN 199 LM+HG C+SAGC+AM ++ + EIYAI R++ G Q Q Q++PFRMT++N+ Y+N+ Sbjct: 146 YLMVHGTCSSAGCFAMTDEAIAEIYAIAREAFAG-GQRGFQFQSYPFRMTAQNVAKYRND 204 Query: 200 PNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 PN FW LK G DYFE +EP + + +YVF Sbjct: 205 PNMPFWKNLKEGSDYFEALREEPKVGVCGTRYVFG 239 >gi|222149988|ref|YP_002550945.1| hypothetical protein Avi_4058 [Agrobacterium vitis S4] gi|221736970|gb|ACM37933.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 445 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 103/214 (48%), Positives = 143/214 (66%), Gaps = 1/214 (0%) Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81 ++ +K E PL ++ S++ K P IRIFK E +LEIWK D + + +Y+ Sbjct: 32 PANVSNKVEQPLPPEILASLKAKGMERNSPIAIRIFKEEGVLEIWKAKTDGRFEKIADYQ 91 Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL 141 ICAWSG GPK + GD QAPEGFY + NLNP SKY+L+IN GFPN++D +NR G +L Sbjct: 92 ICAWSGKLGPKEKEGDRQAPEGFYALTPANLNPYSKYYLAINTGFPNKYDAVNNRNGTNL 151 Query: 142 MIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPN 201 MIHG C+S+GCY+M + Q+ EIYA RD+ RG Q +Q+QAFPFRMT++NM ++ + + Sbjct: 152 MIHGACSSSGCYSMTDAQILEIYAFARDAFRG-GQQTVQLQAFPFRMTAENMARHRYSTH 210 Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 FW MLK G+D FE Q P + + +K+YVF + Sbjct: 211 MPFWQMLKAGYDQFEVTKQPPQVGVCDKKYVFNQ 244 >gi|188584456|ref|YP_001927901.1| hypothetical protein Mpop_5272 [Methylobacterium populi BJ001] gi|179347954|gb|ACB83366.1| protein of unknown function DUF949 [Methylobacterium populi BJ001] Length = 475 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 4/222 (1%) Query: 16 LNGCHHS---RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 L C S ++ P+ + MQ K S P +IR FK E +E+WKR + Sbjct: 18 LGACQDSAMLGGASTRSLTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGSNG 77 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+ Sbjct: 78 QYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDR 137 Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192 A TG +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N Sbjct: 138 AKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNG-GQRAFQFQSYPFRMTASN 196 Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + ++N+PN FW LK G DYFE +EP + +YVF Sbjct: 197 IAKFRNDPNAPFWKNLKEGSDYFEALKEEPRVAACGTKYVFG 238 >gi|254564096|ref|YP_003071191.1| hypothetical protein METDI5786 [Methylobacterium extorquens DM4] gi|254271374|emb|CAX27387.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens DM4] Length = 462 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 134/222 (60%), Gaps = 4/222 (1%) Query: 16 LNGCHHS---RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 L C S +++ P+ + MQ K S P +IR FK E +E+WKR + Sbjct: 18 LGACQDSAMLGGASTRSQTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGANG 77 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+ Sbjct: 78 QYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDR 137 Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192 A TG +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N Sbjct: 138 AKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNG-GQRAFQFQSYPFRMTASN 196 Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + ++N+PN FW LK G DYFE +EP + +YVF Sbjct: 197 IAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVFG 238 >gi|218533074|ref|YP_002423890.1| hypothetical protein Mchl_5200 [Methylobacterium chloromethanicum CM4] gi|218525377|gb|ACK85962.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] Length = 462 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 4/222 (1%) Query: 16 LNGCHHS---RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 L C S ++ P+ + MQ K S P +IR FK E +E+WKR + Sbjct: 18 LGACQDSAMLGGASTRSLTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGANG 77 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+ Sbjct: 78 QYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDR 137 Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192 A TG +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N Sbjct: 138 AKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNG-GQRAFQFQSYPFRMTASN 196 Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + ++N+PN FW LK G DYFE +EP + +YVF Sbjct: 197 IAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVFG 238 >gi|163854129|ref|YP_001642172.1| hypothetical protein Mext_4733 [Methylobacterium extorquens PA1] gi|163665734|gb|ABY33101.1| protein of unknown function DUF949 [Methylobacterium extorquens PA1] Length = 462 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 4/222 (1%) Query: 16 LNGCHHS---RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 L C S ++ P+ + MQ K S P +IR FK E +E+WKR + Sbjct: 18 LGACQDSAMLGGASTRSLTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGANG 77 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+ Sbjct: 78 QYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDR 137 Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192 A TG +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N Sbjct: 138 AKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNG-GQRAFQFQSYPFRMTASN 196 Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + ++N+PN FW LK G DYFE +EP + +YVF Sbjct: 197 IAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVFG 238 >gi|240141585|ref|YP_002966065.1| hypothetical protein MexAM1_META1p5185 [Methylobacterium extorquens AM1] gi|240011562|gb|ACS42788.1| conserved hypothetical protein; putative exported protein [Methylobacterium extorquens AM1] Length = 462 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 133/222 (59%), Gaps = 4/222 (1%) Query: 16 LNGCHHS---RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 L C S ++ P+ + MQ K S P +IR FK E +E+WKR + Sbjct: 18 LGACQDSAMLGGASTRSLTPIPPQTLALMQTKGMSQSDPILIRAFKKEAEMEVWKRGANG 77 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 +Y LLK + IC WSG GPK++ GD QAPEGFY I +NPNS Y+LS ++G+PN D+ Sbjct: 78 QYALLKTFPICRWSGQLGPKLKQGDRQAPEGFYAITPGQMNPNSSYYLSFDVGYPNAIDR 137 Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192 A TG +M+HG C+S+GC+AM + M EIYAI R++ G Q Q Q++PFRMT+ N Sbjct: 138 AKGGTGNYIMVHGTCSSSGCFAMTDASMSEIYAIAREAFNG-GQRAFQFQSYPFRMTASN 196 Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + ++N+PN FW LK G DYFE +EP + +YVF Sbjct: 197 IAKFRNDPNAPFWKNLKEGSDYFETLKEEPRVAACGTKYVFG 238 >gi|300024682|ref|YP_003757293.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526503|gb|ADJ24972.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 321 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 98/227 (43%), Positives = 140/227 (61%), Gaps = 1/227 (0%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67 + A + L C ++ ++ +E PLS++ I + KK P +RIFK E+ LEIWK Sbjct: 16 AVMAGAVLLAACSNTPTIPPPSEVPLSKDAISLLAKKGMQSGSPIFVRIFKEESELEIWK 75 Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127 + D + K Y IC WSG GPK+ GD QAPEGFY + +NPNSKY+LS N+G+P Sbjct: 76 QRDDGRFYHFKTYPICNWSGEIGPKLTYGDRQAPEGFYSVTPGLMNPNSKYYLSFNLGYP 135 Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187 N +D++ NRTG +M+HG C SAGCYAM + M+EIY + R++L+ Q+ Q+QA PFR Sbjct: 136 NAYDRSWNRTGDSVMVHGNCRSAGCYAMTDALMEEIYGLSREALKA-GQTSFQVQALPFR 194 Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 MT M +N+ ++W LK G+DYFEK P + + ++YV Sbjct: 195 MTDARMAREKNSKWLTYWKTLKQGYDYFEKYRVPPNVVVCERRYVVG 241 >gi|49476284|ref|YP_034325.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1] gi|49239092|emb|CAF28395.1| hypothetical protein BH16330 [Bartonella henselae str. Houston-1] Length = 247 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 114/243 (46%), Positives = 154/243 (63%), Gaps = 5/243 (2%) Query: 1 MTNRYNILLFALFI--FLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56 M + ++++ LF L C S+ K E PL + M P+ P ++R Sbjct: 1 MIFKRFLIIYVLFATGILTACEGRLPASIRAKVEQPLPREVQNRMVLYNVDPYAPIMMRF 60 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 FK ENI EIWK++ +VL+ Y IC WSG GPK + GD Q PEGFY I + +NP S Sbjct: 61 FKEENIAEIWKQSRSGSFVLIARYDICKWSGQLGPKYKEGDFQTPEGFYTISASQMNPYS 120 Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176 KY+LS NIGFPN +D+AH RTG++LM+HG C SAGCY+M++K M +IYA RD+ RG Q Sbjct: 121 KYYLSFNIGFPNLYDQAHGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFRG-GQ 179 Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 Q+QAFPFRMT NM + ++P+Y FW MLK G+D FEKN + P + + K+YVF G Sbjct: 180 RKFQLQAFPFRMTDANMARHSSDPHYQFWMMLKKGYDLFEKNRKPPTVDVYEKRYVFNTG 239 Query: 237 QTI 239 +T+ Sbjct: 240 KTV 242 >gi|182677537|ref|YP_001831683.1| hypothetical protein Bind_0542 [Beijerinckia indica subsp. indica ATCC 9039] gi|182633420|gb|ACB94194.1| protein of unknown function DUF949 [Beijerinckia indica subsp. indica ATCC 9039] Length = 407 Score = 314 bits (804), Expect = 8e-84, Method: Composition-based stats. Identities = 99/229 (43%), Positives = 144/229 (62%), Gaps = 3/229 (1%) Query: 11 ALFIFLNGCH--HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 ++ + C K E P+ + M+ + T+ P +IR +K E LEIWK+ Sbjct: 14 SILVAFFACQQGAVAGGYSKGETPIPGATLALMRARDTTAEAPILIRTYKKEAELEIWKQ 73 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 + +VLLK + IC WSG GPK + GD QAPEGFY++G +NPNS Y+LS ++G+PN Sbjct: 74 ARNGRFVLLKTFPICRWSGQLGPKSQQGDRQAPEGFYWVGPKQMNPNSAYYLSFDVGYPN 133 Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188 +DKAH +G+ +M+HG C+SAGC+AM +K + EIYAI R++LRG Q Q QA+PFRM Sbjct: 134 AYDKAHGGSGSYVMVHGTCSSAGCFAMTDKGVGEIYAIAREALRG-GQQAFQFQAYPFRM 192 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 T++NM Y+ + N +FW LK G D FE +EP + + + +YVF + Sbjct: 193 TAQNMAKYRLDANIAFWRQLKEGSDRFEATGEEPLVSVASGRYVFSPSK 241 >gi|170748277|ref|YP_001754537.1| hypothetical protein Mrad2831_1859 [Methylobacterium radiotolerans JCM 2831] gi|170654799|gb|ACB23854.1| protein of unknown function DUF949 [Methylobacterium radiotolerans JCM 2831] Length = 504 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 101/209 (48%), Positives = 132/209 (63%), Gaps = 1/209 (0%) Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84 ++ P++ + MQ K P P +IR FK E +EIWKR D Y L+K Y IC Sbjct: 33 PSARSLAPIAPQTVALMQSKGMQPSDPILIRTFKKEAEMEIWKRGSDGRYALMKTYPICR 92 Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144 WSG GPK GD QAPEGFY I +NPNS Y+LS + GFPN D+A+ RTG LM+H Sbjct: 93 WSGQLGPKTREGDRQAPEGFYTITPGLMNPNSSYYLSFDTGFPNAVDRANGRTGKYLMVH 152 Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 G C+SAGC+AM + + EIYA+ RD+ G Q Q Q++PFRMT++NM ++N+PN +F Sbjct: 153 GTCSSAGCFAMTDATIAEIYAVARDAFIG-GQRSFQFQSYPFRMTAENMAKFRNDPNIAF 211 Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 W LK G DYFE H+EP + +YVF Sbjct: 212 WQNLKEGSDYFEALHEEPKVGQCGTKYVF 240 >gi|170742903|ref|YP_001771558.1| hypothetical protein M446_4794 [Methylobacterium sp. 4-46] gi|168197177|gb|ACA19124.1| protein of unknown function DUF949 [Methylobacterium sp. 4-46] Length = 518 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 102/212 (48%), Positives = 136/212 (64%), Gaps = 1/212 (0%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 + P+ + + M +K SP P +IR FK E+ +E+WKR D Y LLK + I Sbjct: 28 SGGSTRHLQPIPQKTVALMSQKGMSPGDPILIRAFKKESEMEVWKRGSDGRYALLKTFPI 87 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM 142 C WSG GPKI GD QAPEGFY I +NPNS Y+LS + GFPN FD+A+NRTG LM Sbjct: 88 CRWSGQLGPKIRQGDRQAPEGFYPITPGQMNPNSSYYLSFDTGFPNAFDRANNRTGTYLM 147 Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNY 202 +HG C+SAGC+AM ++ + EIYAI R++ G Q Q Q++PFRM ++N+ Y+N+PN Sbjct: 148 VHGTCSSAGCFAMTDEAIAEIYAIAREAFAG-GQRAFQFQSYPFRMNAENLAKYRNDPNM 206 Query: 203 SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 FW LK G DYFE H+EP + + +YVF Sbjct: 207 PFWKNLKEGSDYFEALHEEPRVGVCGTRYVFG 238 >gi|218529105|ref|YP_002419921.1| hypothetical protein Mchl_1094 [Methylobacterium chloromethanicum CM4] gi|240141940|ref|YP_002966450.1| hypothetical protein MexAM1_META2p0201 [Methylobacterium extorquens AM1] gi|254559780|ref|YP_003066875.1| hypothetical protein METDI1259 [Methylobacterium extorquens DM4] gi|218521408|gb|ACK81993.1| protein of unknown function DUF949 [Methylobacterium chloromethanicum CM4] gi|240011884|gb|ACS43109.1| conserved hypothetical protein [Methylobacterium extorquens AM1] gi|254267058|emb|CAX22871.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 357 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 93/218 (42%), Positives = 136/218 (62%), Gaps = 2/218 (0%) Query: 19 CHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 C R + + P+ + M K SP P ++R +K E+ +E+WKR D +Y LL Sbjct: 18 CQDGRYAASTRHLAPIPPATLALMSTKEMSPADPILMRAYKKESEIELWKRGADGKYALL 77 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 K Y +C WSG GPK GD QAPEGFY I ++NPNS +LS N+G+PNE+D++ RT Sbjct: 78 KTYPMCRWSGQLGPKTREGDRQAPEGFYSITPASMNPNSSLYLSFNLGYPNEYDRSLGRT 137 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197 GA LM+HG C+S GC+AM ++ + E+YA+VR++ G Q +Q Q++PFRMT +N+ ++ Sbjct: 138 GAHLMVHGSCSSRGCFAMTDEAISELYAVVREAFAG-GQHAVQFQSYPFRMTPENLARHR 196 Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 +PN +FW +K G D FE EP + + +YVF Sbjct: 197 QDPNIAFWMNIKEGSDRFEITKTEPVVGVAGARYVFDA 234 >gi|182679828|ref|YP_001833974.1| hypothetical protein Bind_2917 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635711|gb|ACB96485.1| protein of unknown function DUF949 [Beijerinckia indica subsp. indica ATCC 9039] Length = 545 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 95/225 (42%), Positives = 137/225 (60%), Gaps = 5/225 (2%) Query: 17 NGC----HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 GC +A PLS + M + T+ P +IR +K E LEIWK D Sbjct: 49 AGCDEVMSPPGLSNARAHAPLSHKTLTLMSEHGTTSASPVLIRTYKKEAELEIWKMGADG 108 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 Y LK Y +C WSG GPK+ GD Q PEGFY I ++PNS Y+LS ++G+PN FD+ Sbjct: 109 RYKHLKTYPMCRWSGQLGPKMREGDRQVPEGFYAITPAQMHPNSHYYLSFDVGYPNTFDR 168 Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192 A R+G +M+HG C+SAGC++M ++Q++EIYAIVR+ G Q IQ+Q++PFRMT++N Sbjct: 169 AWGRSGGSIMVHGVCSSAGCFSMTDEQIEEIYAIVREGFAG-GQRAIQMQSYPFRMTAEN 227 Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + Y+ +PN +FW LK G D+F+ QE + + ++ Y+F Sbjct: 228 LAKYRLDPNIAFWRQLKEGADHFDLTRQEVIVGVCDRHYIFNALP 272 >gi|49474796|ref|YP_032838.1| hypothetical protein BQ13240 [Bartonella quintana str. Toulouse] gi|49240300|emb|CAF26782.1| hypothetical protein BQ13240 [Bartonella quintana str. Toulouse] Length = 247 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 111/242 (45%), Positives = 147/242 (60%), Gaps = 5/242 (2%) Query: 1 MTNRYNILLFALFIF--LNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56 MT LF L C S+ K E PL + + M P+ P ++R Sbjct: 1 MTFNRFFATCVLFAIGILTACKERLPASIRAKVEQPLPQEVQNKMVLHNIDPYAPIMMRF 60 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 FK EN+ EIWK++ +VL+ Y IC WSG GPK + GD Q PEGFY I + +NP S Sbjct: 61 FKEENVAEIWKQSRSGPFVLVARYDICKWSGQLGPKYKEGDLQTPEGFYTISADQMNPYS 120 Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176 KY+LS NIGFPN +D+ H RTG++LM+HG C S GCYAM +K M +IYA RD+ RG Q Sbjct: 121 KYYLSFNIGFPNLYDQVHGRTGSNLMVHGSCFSVGCYAMGDKNMAQIYAFARDAFRG-GQ 179 Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 Q+QAFPFRMT+ NM + +P+Y FW MLK G+D+FE+N + P + + K+YVF Sbjct: 180 KEFQLQAFPFRMTNANMARHSTDPHYQFWVMLKEGYDFFEENRKPPTVDVYKKRYVFSTN 239 Query: 237 QT 238 +T Sbjct: 240 KT 241 >gi|240851368|ref|YP_002972771.1| putative lipoprotein [Bartonella grahamii as4aup] gi|240268491|gb|ACS52079.1| putative lipoprotein [Bartonella grahamii as4aup] Length = 249 Score = 311 bits (796), Expect = 7e-83, Method: Composition-based stats. Identities = 111/239 (46%), Positives = 152/239 (63%), Gaps = 5/239 (2%) Query: 1 MTNRYNILLFALFI--FLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56 MT + + LF+ L C S+ K E PL + + M P+ P V+R Sbjct: 1 MTFSRFLAVCVLFVMGILAACGGRLPASIRAKVEQPLPQEIQNRMALYDIDPYAPIVMRF 60 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 FK EN+ E+WK++ ++L+ Y IC WSG GPK + GD Q PEGFY I N +NP S Sbjct: 61 FKEENLAEVWKQSRSGPFILVARYGICKWSGKLGPKYKEGDLQTPEGFYTISANQMNPYS 120 Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176 KY+LS NIGFPN +D+ + RTG++LM+HG C SAGCY+M++K M +IYA RD+ +G Q Sbjct: 121 KYYLSFNIGFPNLYDQENGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFKG-GQ 179 Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 Q+QAFPFRMT NM + N+P+Y FW MLK G+D+FEKN Q P +++ K+YVF + Sbjct: 180 REFQLQAFPFRMTEDNMLRHSNDPHYQFWVMLKKGYDFFEKNRQPPTVEVYGKRYVFNR 238 >gi|163869344|ref|YP_001610600.1| hypothetical protein Btr_2657 [Bartonella tribocorum CIP 105476] gi|161019047|emb|CAK02605.1| hypothetical protein BT_2657 [Bartonella tribocorum CIP 105476] Length = 249 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 109/240 (45%), Positives = 153/240 (63%), Gaps = 5/240 (2%) Query: 1 MTNRYNILLFALFIF--LNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56 MT + + LF+ L C S+ K E PL + + M P+ P V+R Sbjct: 1 MTFNSFLSVCVLFVIGILTACEGRLPASIRAKVEQPLPQEIQNRMALYDIDPYAPIVMRF 60 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 FK EN+ E+WK++ ++L+ Y IC WSG GPK + GD Q PEGFY I N +NP S Sbjct: 61 FKEENVAEVWKQSRSGPFILVARYGICKWSGKLGPKYKEGDLQTPEGFYTITANQMNPYS 120 Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176 KY+LS NIG+PN +D+ + RTG++LM+HG C SAGCY+M++K M +IYA RD+ +G Q Sbjct: 121 KYYLSFNIGYPNLYDQENGRTGSNLMVHGSCFSAGCYSMSDKNMAQIYAFARDAFKG-GQ 179 Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 Q+QAFPFRMT NM + N+P+Y FW MLK G+D+FE+N Q P +++ K+Y+F +G Sbjct: 180 RAFQLQAFPFRMTEDNMLRHGNDPHYPFWVMLKKGYDFFEENRQPPIVEVYGKRYIFNRG 239 >gi|188583325|ref|YP_001926770.1| hypothetical protein Mpop_4119 [Methylobacterium populi BJ001] gi|179346823|gb|ACB82235.1| protein of unknown function DUF949 [Methylobacterium populi BJ001] Length = 355 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 92/219 (42%), Positives = 137/219 (62%), Gaps = 2/219 (0%) Query: 19 CHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 C + + + P+ + M K SP P ++R +K E+ +E+WKR D +Y LL Sbjct: 18 CQDGQYAASTRHLAPIPPATLALMSAKGVSPADPILMRAYKKESEIELWKRGTDGKYALL 77 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 K Y +C WSG GPK GD QAPEGFY + ++NPNS +LS N+G+PNE+D++ RT Sbjct: 78 KTYAMCRWSGQLGPKTREGDRQAPEGFYAVTPASMNPNSSLYLSFNLGYPNEYDRSLGRT 137 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197 GA LM+HG C+S GC+AM ++ + E+YA+VR++ G Q +Q Q++PFRMT +N+ ++ Sbjct: 138 GAHLMVHGSCSSRGCFAMTDEVISELYAVVREAFAG-GQRAVQFQSYPFRMTPENLARHR 196 Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PN +FW LK G D FE E + + + +YVF G Sbjct: 197 QDPNIAFWRNLKEGSDRFEVTGAEQGVGVADGRYVFDAG 235 >gi|240139176|ref|YP_002963651.1| hypothetical protein MexAM1_META1p2599 [Methylobacterium extorquens AM1] gi|240009148|gb|ACS40374.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 356 Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats. Identities = 92/219 (42%), Positives = 134/219 (61%), Gaps = 2/219 (0%) Query: 19 CHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 C + + + P+ + M K S P ++R +K E+ +E+WKR D Y LL Sbjct: 18 CQDGQYAASTRHLAPIPPATLALMSTKGVSAADPILMRAYKKESEIELWKRGADGRYALL 77 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 K Y +C WSG GPK GD QAPEGFY + +LNPNS +LS ++G+PNE+D++ RT Sbjct: 78 KTYPMCRWSGQLGPKTREGDRQAPEGFYAVTPASLNPNSSLYLSFDLGYPNEYDRSLGRT 137 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197 GA LM+HG C+S GC+AM ++ + E+YA+VR++ G Q +Q Q++PFRMT +N+ ++ Sbjct: 138 GAHLMVHGSCSSRGCFAMTDEAISELYAVVREAFAG-GQRAVQFQSYPFRMTPENLARHR 196 Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PN +FW LK G D FE EP + +YVF G Sbjct: 197 QDPNVAFWRNLKEGSDRFEVTWAEPVVGAAGGRYVFDAG 235 >gi|150376335|ref|YP_001312931.1| hypothetical protein Smed_4193 [Sinorhizobium medicae WSM419] gi|150030882|gb|ABR62998.1| protein of unknown function DUF949 [Sinorhizobium medicae WSM419] Length = 364 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 102/235 (43%), Positives = 147/235 (62%), Gaps = 2/235 (0%) Query: 2 TNRYNILLFALFIFLNGCHHSRSL-IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 L + FL+GC + KA LS+ ++ M KK+ SP P ++RIFK E Sbjct: 32 RMAKIGLALSAAAFLSGCLAMGLYDLSKAPPQLSKKVLAEMAKKKMSPNSPVLVRIFKKE 91 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + LE+WK + Y L K Y +C WSG GPK + GD QAPEGFY++ LNPNS+Y++ Sbjct: 92 SELEVWKADASGTYALFKTYPMCRWSGKLGPKKKDGDRQAPEGFYHVSARMLNPNSQYYV 151 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 S N+G+PN + A TG LM+HG C+SAGCYAM ++ + EIYAIV+ +L Q H Q Sbjct: 152 SFNLGYPNRLESALGYTGEALMVHGACSSAGCYAMTDRGVGEIYAIVQRAL-AAGQKHFQ 210 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 +QA+PFRMT++NM L++ +P+ +FW LK G+D F + ++P + + +YVF Sbjct: 211 VQAYPFRMTTENMALHKGDPSMAFWKTLKQGYDAFAFSRRQPKVSVCGGRYVFNT 265 >gi|298291546|ref|YP_003693485.1| hypothetical protein Snov_1557 [Starkeya novella DSM 506] gi|296928057|gb|ADH88866.1| conserved hypothetical protein [Starkeya novella DSM 506] Length = 339 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 95/219 (43%), Positives = 132/219 (60%), Gaps = 2/219 (0%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 GC S D+A+ P+ L+ M K SP P ++RI+K E+ LEIWKR+ Y LL Sbjct: 18 GCIGSD-YDDRADVPIPPKLMQQMAAKGMSPADPIMVRIYKRESELEIWKRDRSGRYALL 76 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 K Y +C WSG GPK GD QAPEGFY + +NP S+++L+ N+G+PN+ ++A + Sbjct: 77 KTYPMCRWSGRLGPKTREGDRQAPEGFYAVTPGLMNPRSQFYLAFNLGYPNQLEEALGYS 136 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197 G+ LM+HG C SAGCYAM N + E+YA+ R++L Q Q+QA PFRMT N ++ Sbjct: 137 GSALMVHGACTSAGCYAMTNDGIAEVYAVAREAL-AAGQPSFQVQALPFRMTPANFAEHR 195 Query: 198 NNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 ++PN +FW LK G D F Q P + +Y F G Sbjct: 196 DDPNMAFWRNLKEGTDLFAVTRQPPNVAACGGRYRFTPG 234 >gi|312114367|ref|YP_004011963.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC 17100] gi|311219496|gb|ADP70864.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC 17100] Length = 453 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 94/236 (39%), Positives = 135/236 (57%), Gaps = 9/236 (3%) Query: 6 NILLFALFIFLNGC-------HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 + L + L GC + + + AE L + + K P IRIFK Sbjct: 7 FASVAPLLLGLTGCLNLFGFGGDAENAVPPAERQLPASTQAMLAIKGMRTDAPIFIRIFK 66 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 E+ LE+WK D + + Y ICAWSGT GPKI+TGD Q+PEGFY + +NP S Y Sbjct: 67 EESELEVWKLK-DGRFQHFRTYPICAWSGTLGPKIQTGDRQSPEGFYTVTRGQMNPRSNY 125 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 +L+ NIG+PN D+ + TG+ LM+HG C S GCYAM + ++EIY + R++ Q+ Sbjct: 126 YLAFNIGYPNVHDQVNGHTGSALMVHGNCKSVGCYAMTDAYIEEIYILAREAFDA-GQTK 184 Query: 179 IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 +QA PFRMT+ NM +++NP Y+FW LK G+D FE + + P +++ KQY Sbjct: 185 FHVQALPFRMTAANMAKHRDNPWYAFWARLKEGYDSFEASGKPPIVKVCGKQYQVN 240 >gi|163853853|ref|YP_001641896.1| hypothetical protein Mext_4457 [Methylobacterium extorquens PA1] gi|163665458|gb|ABY32825.1| protein of unknown function DUF949 [Methylobacterium extorquens PA1] Length = 396 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 93/234 (39%), Positives = 140/234 (59%), Gaps = 2/234 (0%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 R I L ++ + DKA P+ + M + T+ P V+R +K E+ + Sbjct: 6 RTLIPGLVGLAILTA-SNTLARADKANAPIPAATLALMAARGTNAASPIVLRAYKKESEI 64 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123 E+WKRN YV +K Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS + Sbjct: 65 EVWKRNASGRYVPIKTYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFD 124 Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 +G+PN +D+AH TG+ +M+HG C+S GC+AM + E++AI R++ G Q Q Q+ Sbjct: 125 VGYPNAYDRAHGSTGSAVMVHGVCSSMGCFAMTDAVAGELFAIAREAFAG-GQGAFQFQS 183 Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FPFRMT+ NM ++ +PN +FW LK G D FE +EP + ++ +Y F + Sbjct: 184 FPFRMTAANMARHRTDPNIAFWRQLKEGSDRFEATGEEPAVSVVGGRYTFAPSR 237 >gi|218532798|ref|YP_002423614.1| hypothetical protein Mchl_4921 [Methylobacterium chloromethanicum CM4] gi|218525101|gb|ACK85686.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] Length = 406 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 93/234 (39%), Positives = 140/234 (59%), Gaps = 2/234 (0%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 R I L ++ + DKA P+ + M + T+ P V+R +K E+ + Sbjct: 16 RTLIPGLVGLAILTA-SNTLARADKANAPIPAATLALMAARGTNAASPIVLRAYKKESEI 74 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123 E+WKRN YV +K Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS + Sbjct: 75 EVWKRNASGRYVPIKTYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFD 134 Query: 124 IGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 +G+PN +D+AH TG+ +M+HG C+S GC+AM + E++AI R++ G Q Q Q+ Sbjct: 135 VGYPNAYDRAHGSTGSAVMVHGVCSSMGCFAMTDAVAGELFAIAREAFAG-GQVAFQFQS 193 Query: 184 FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FPFRMT+ NM ++ +PN +FW LK G D FE +EP + + + +Y F + Sbjct: 194 FPFRMTAANMARHRTDPNIAFWRQLKEGSDRFEATGEEPAVSVTSGRYTFAPSR 247 >gi|121602349|ref|YP_988380.1| putative lipoprotein [Bartonella bacilliformis KC583] gi|120614526|gb|ABM45127.1| putative lipoprotein [Bartonella bacilliformis KC583] Length = 247 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 110/238 (46%), Positives = 148/238 (62%), Gaps = 2/238 (0%) Query: 1 MTNRYNILLFALFI-FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M NR ++ L L C + K+E PL +N++ M K + P ++R FK Sbjct: 2 MLNRCFLVFLLLVTGILAACQGKFARHHKSEQPLPKNILNKMAKFNIDQYAPIMMRFFKE 61 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 ENI EIWK+N + +VL+ Y IC WSG GPK GD QAPEGFY + N +NP S Y+ Sbjct: 62 ENIAEIWKQNREGRFVLITHYSICKWSGKLGPKYREGDYQAPEGFYMVRPNQMNPRSNYY 121 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 LS NIGFPN +D+ + RTG+ LM+HG CASAGCY+MN+K M +IYA RD+ RG Q Sbjct: 122 LSFNIGFPNLYDQVNGRTGSYLMVHGGCASAGCYSMNDKNMAQIYAFARDAFRG-GQRGF 180 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + AFPF MT NM ++ +P+Y FW MLK G+D+FEK + P I++ K+Y+F Sbjct: 181 SLHAFPFHMTDANMARHRASPHYPFWKMLKEGYDFFEKYRKLPVIEVYEKRYIFRHPT 238 >gi|300024883|ref|YP_003757494.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526704|gb|ADJ25173.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 326 Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 136/238 (57%), Gaps = 3/238 (1%) Query: 4 RYNILLFALFIF--LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R N L LF+ L H +R+ A PL ++ K P P IR+FK E+ Sbjct: 3 RANWLAAVLFLLGTLPALHAARAEEQAAAKPLPATTEAALLMKEIVPEAPVYIRVFKEES 62 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 LE+WK + Y L+K + IC W GT GPK GD +PEGFY + P+SKY L+ Sbjct: 63 ELEVWKARPNGRYALVKTFPICNWGGTLGPKQTQGDRMSPEGFYAATPGGMKPDSKYHLA 122 Query: 122 INIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181 NIG+PN D+A RTGA +M+HG+C S GC+AM++K ++EIYA VRD+L + + + Sbjct: 123 FNIGYPNALDRALGRTGAYIMVHGDCRSVGCFAMSDKLIEEIYAFVRDAL-AAGEPSVPV 181 Query: 182 QAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 FPFRMT+ N++ + +NP + W LK +D F + + P + + +K+YV + Sbjct: 182 HVFPFRMTASNIKRHADNPARTTWAPLKQAYDDFAETREPPKVGMCSKRYVVNSLTPV 239 >gi|188584157|ref|YP_001927602.1| hypothetical protein Mpop_4971 [Methylobacterium populi BJ001] gi|179347655|gb|ACB83067.1| protein of unknown function DUF949 [Methylobacterium populi BJ001] Length = 400 Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 94/231 (40%), Positives = 141/231 (61%), Gaps = 1/231 (0%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +L + + + S +L DKA P+ + M + T P V+R +K E+ +E+W Sbjct: 12 LLGGLIAAWTSMAWTSAALADKASAPIPAATLALMAARGTHAASPIVLRAYKKESEIEVW 71 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 KRN YV +K Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS +IG+ Sbjct: 72 KRNAAGRYVPIKTYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDIGY 131 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN +D+AH TG+ +M+HG C+S GC+AM + E+++I R++ G QS Q Q+FPF Sbjct: 132 PNAYDRAHGSTGSAVMVHGICSSMGCFAMTDAVAGELFSIAREAFAG-GQSAFQFQSFPF 190 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 RMT+ NM ++ +PN +FW LK G D FE +EP + + +Y F + Sbjct: 191 RMTAANMARHRTDPNIAFWRQLKEGSDRFEATGEEPVVSVAGGRYAFAPSR 241 >gi|323137197|ref|ZP_08072276.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242] gi|322397555|gb|EFY00078.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242] Length = 407 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 92/217 (42%), Positives = 131/217 (60%), Gaps = 1/217 (0%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80 ++ P+ + M+K T+ P +IR +K E LEIWK D YV LK + Sbjct: 24 EDGGFSHRSLAPIPPETVALMEKVGTTKEAPMLIRAYKKEAELEIWKMRSDGRYVHLKTF 83 Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGAD 140 +C WSG GPK GD Q PEGFY I +NPNS Y+LS N+G+PN+ D+A +G Sbjct: 84 PMCRWSGQLGPKTREGDRQVPEGFYSITPAQMNPNSAYYLSFNVGYPNQLDRALGHSGGT 143 Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNP 200 +M+HG C+SAGC++M +KQ+ EIYAI R S G Q IQ+Q++PF+MT++N+ ++ +P Sbjct: 144 IMVHGACSSAGCFSMTDKQIAEIYAIARSSF-GGGQRAIQMQSYPFKMTAENLAKHRLDP 202 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 N FW LK G+D+FE +EP + + YVF Sbjct: 203 NIGFWKNLKEGNDHFEVTKEEPQVAFCGRHYVFNATP 239 >gi|296445739|ref|ZP_06887692.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium OB3b] gi|296256719|gb|EFH03793.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium OB3b] Length = 500 Score = 304 bits (778), Expect = 8e-81, Method: Composition-based stats. Identities = 92/220 (41%), Positives = 137/220 (62%), Gaps = 2/220 (0%) Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78 C+ S L ++ P+ + M++ + PT+IR +K E+ +IWK+ D YV LK Sbjct: 26 CNDSG-LSQRSLQPIPPETLALMEQAGVTKESPTLIRSYKKESEFQIWKQRPDGRYVYLK 84 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138 + +C WSG GPK+ GD QAPEGFY I +NPNS Y+LS N+G+PN +D+A G Sbjct: 85 TFPMCRWSGQLGPKVREGDRQAPEGFYSITPGQMNPNSSYYLSFNVGYPNAYDRALGHGG 144 Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198 +M+HG C+SAGC++M + Q+ EIYAI+R S N Q IQ+Q++PF+MT++N+ ++ Sbjct: 145 GSIMVHGACSSAGCFSMTDHQISEIYAILRTSFN-NGQRAIQMQSYPFKMTAENLAKHRL 203 Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 +P+ FW LK G D+FE +EP + + YVF T Sbjct: 204 DPHIGFWKQLKNGSDHFETAWREPTVGVCGHHYVFDAAPT 243 >gi|240141307|ref|YP_002965787.1| hypothetical protein MexAM1_META1p4901 [Methylobacterium extorquens AM1] gi|240011284|gb|ACS42510.1| conserved hypothetical protein DUF949 [Methylobacterium extorquens AM1] Length = 382 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 90/219 (41%), Positives = 136/219 (62%), Gaps = 1/219 (0%) Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78 ++ + DKA P+ + M + T+ P V+R +K E+ +E+WKRN YV +K Sbjct: 6 ASNTLARADKANAPIPAATLALMAARGTNAASPIVLRAYKKESEIEVWKRNASGRYVPIK 65 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138 Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN +D+AH TG Sbjct: 66 TYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPNAYDRAHGSTG 125 Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198 + +M+HG C+S GC+AM + E++AI R++ G Q Q Q+FPFRMT+ NM ++ Sbjct: 126 SAVMVHGVCSSMGCFAMTDAVAGELFAIAREAFAG-GQGAFQFQSFPFRMTAANMARHRT 184 Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 +PN +FW LK G D FE +EP + + +Y F + Sbjct: 185 DPNIAFWRQLKEGSDRFEATGEEPAVSVAGGRYTFAPSR 223 >gi|159185697|ref|NP_357274.2| hypothetical protein Atu3332 [Agrobacterium tumefaciens str. C58] gi|159140831|gb|AAK90059.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 328 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 101/229 (44%), Positives = 146/229 (63%), Gaps = 2/229 (0%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEHP-LSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 + A+ L C K + P LS ++ M K P P ++RIFK E+ LE+W Sbjct: 3 AVVAIGGSLVACTSMGLDSVKKDPPKLSSKMMAQMSAKSMRPESPVLVRIFKQESELEVW 62 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 K + Y LLK Y +C WSG GPK++TGD QAPEGFY++ LNPNS+Y++S N+G+ Sbjct: 63 KVDKTGNYALLKAYPMCRWSGKLGPKMKTGDRQAPEGFYHVSAGMLNPNSQYYVSFNLGY 122 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN + A TG LM+HG C+S+GCYAM ++Q+ EIYAIV +L+G Q Q+QA+PF Sbjct: 123 PNRLESALGYTGEALMVHGACSSSGCYAMTDQQVGEIYAIVARALQG-GQDRFQVQAYPF 181 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 RM+++NM ++++PN FW LK G+DYFE ++P + + ++YVF Sbjct: 182 RMSARNMVAHRDDPNMPFWKTLKEGYDYFEVTRRQPKVSVCGRRYVFNS 230 >gi|332716121|ref|YP_004443587.1| hypothetical protein AGROH133_11230 [Agrobacterium sp. H13-3] gi|325062806|gb|ADY66496.1| hypothetical protein AGROH133_11230 [Agrobacterium sp. H13-3] Length = 351 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 100/231 (43%), Positives = 144/231 (62%), Gaps = 2/231 (0%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHP-LSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 + A+ L C K + P LS ++ M K P P ++RIFK E+ LE Sbjct: 24 IAAVVAIGSGLAACTSMGLDSVKKDPPKLSSKMMAQMSAKSMRPESPVLVRIFKQESELE 83 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 +WK + Y LLK Y +C WSG GPK +TGD QAPEGFY++ LNPNS+Y++S N+ Sbjct: 84 VWKIDKTGNYALLKTYPMCRWSGKLGPKTKTGDRQAPEGFYHVSAGMLNPNSQYYVSFNL 143 Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 G+PN + A TG LM+HG C+S+GCYAM ++Q+ EIYA+V +L+G Q Q+QA+ Sbjct: 144 GYPNRLESALGYTGEALMVHGACSSSGCYAMTDQQVGEIYAVVARALQG-GQDRFQVQAY 202 Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 PFRM+++NM +++PN FW LK G+DYFE ++P + + ++YVF Sbjct: 203 PFRMSARNMVANRDDPNMPFWKTLKEGYDYFEVTRRQPKVSVCGRRYVFNS 253 >gi|220925727|ref|YP_002501029.1| hypothetical protein Mnod_5898 [Methylobacterium nodulans ORS 2060] gi|219950334|gb|ACL60726.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 378 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 137/211 (64%), Gaps = 1/211 (0%) Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86 K PL + M + T+P P ++R +K E+ +E+WKR D +VLLK + IC WS Sbjct: 33 PKHLLPLPATTLALMTARNTTPGAPILMRAYKKESEIEVWKRAADGRFVLLKSFPICRWS 92 Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146 G GPK++ GD QAPEGFY + +NPNS+Y+LS ++G+PN +D+AH TG+ LM+HG Sbjct: 93 GQLGPKLKAGDRQAPEGFYTVRPQQMNPNSRYYLSFDVGYPNAYDRAHGGTGSALMVHGT 152 Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWN 206 C+SAGC+AM ++Q+ EI+A+ R++ G Q+ Q QAFPFRM ++N+ ++ +PN +FW Sbjct: 153 CSSAGCFAMTDRQVGEIFALAREAFAG-GQAAFQFQAFPFRMNAENLARHRQDPNIAFWR 211 Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 LK G D FE +EP + + +Y F Sbjct: 212 QLKEGSDRFEATGREPLVSVAAGRYGFAPYP 242 >gi|254563816|ref|YP_003070911.1| hypothetical protein METDI5493 [Methylobacterium extorquens DM4] gi|254271094|emb|CAX27101.1| conserved hypothetical protein DUF949 [Methylobacterium extorquens DM4] Length = 381 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 90/219 (41%), Positives = 137/219 (62%), Gaps = 1/219 (0%) Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78 ++ + DKA P+ + M + T+ P V+R +K E+ +E+WKRN YV +K Sbjct: 6 ASNTLARADKANAPIPAATLALMTARGTNAASPIVLRAYKKESEIEVWKRNAAGRYVPIK 65 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138 Y IC WSG GPK ++GD Q PEGFY + + +NPNS+Y+LS ++G+PN +D+AH TG Sbjct: 66 TYPICRWSGQLGPKTKSGDRQTPEGFYTVAKSQMNPNSRYYLSFDVGYPNAYDRAHGSTG 125 Query: 139 ADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQN 198 + +M+HG C+S GC+AM + E++AI R++ G Q Q Q+FPFRMT+ NM ++ Sbjct: 126 SAVMVHGVCSSMGCFAMTDAVAGELFAIAREAFAG-GQGAFQFQSFPFRMTAANMARHRT 184 Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 +PN +FW LK G D FE +EP + + + +Y F + Sbjct: 185 DPNIAFWRQLKEGSDRFEATGEEPAVSVTSGRYTFAPSR 223 >gi|319409434|emb|CBI83083.1| conserved exported hypothetical protein [Bartonella schoenbuchensis R1] Length = 249 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 102/235 (43%), Positives = 141/235 (60%), Gaps = 4/235 (1%) Query: 4 RYNILLFALFI-FLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 RY + F L + L C S+ K + PL + + M + P+ P ++R FK E Sbjct: 5 RYFLSFFLLAVGILAACQERLPASIQAKVKQPLPKEIQHKMVEYNVDPYAPIMMRFFKEE 64 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 N E+WK++ +VL+ Y IC WSG GPK + GD Q PEGFY + + +NP S+ +L Sbjct: 65 NTAEVWKQDRTGRFVLVASYDICKWSGQLGPKYKEGDYQTPEGFYTVNASQMNPYSRRYL 124 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 S NIGFPN +D+AH RTG+ LM+HG C S GCYAM + M +IYA RD+ +G Q Q Sbjct: 125 SFNIGFPNLYDQAHGRTGSYLMVHGGCTSVGCYAMTDNNMGQIYAFARDAFKG-GQKEFQ 183 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + FPFRMT NM+ +++NP+Y FW MLK G+D FE I + K+YVF + Sbjct: 184 LHTFPFRMTDANMERHRDNPHYPFWMMLKEGYDLFEAKRAPSKIDVYEKRYVFDR 238 >gi|90020858|ref|YP_526685.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Saccharophagus degradans 2-40] gi|89950458|gb|ABD80473.1| protein of unknown function DUF949 [Saccharophagus degradans 2-40] Length = 238 Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats. Identities = 94/230 (40%), Positives = 136/230 (59%), Gaps = 1/230 (0%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +LLF+ I N + + A + + LI ++ +K P IRIFK LE+W Sbjct: 10 LLLFSCAIAANNQLPTSARSIAAINKVEPALIKALSEKGLRYGAPIFIRIFKQSATLEVW 69 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 + + L K Y ICA SG GPK+ +GD QAPEGFY++ NP SK+ LS N+G+ Sbjct: 70 LQAESGRFELFKAYDICAQSGRLGPKLRSGDRQAPEGFYFVNAQRFNPWSKFHLSFNLGY 129 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN +D+AH RTG+ LM+HG+C S GCYAM + ++EIYA+ + SL Q ++ FPF Sbjct: 130 PNAYDRAHGRTGSALMVHGDCVSIGCYAMTDSGIEEIYALAQKSLED-GQPFFRVHIFPF 188 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 R++ + ++ +NN Y+FW LK G DYFE+ P + + NK+YVF Sbjct: 189 RLSDEALERVKNNRWYTFWLNLKQGFDYFEQTKMPPNVNVQNKRYVFSAP 238 >gi|217979292|ref|YP_002363439.1| protein of unknown function DUF949 [Methylocella silvestris BL2] gi|217504668|gb|ACK52077.1| protein of unknown function DUF949 [Methylocella silvestris BL2] Length = 415 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 98/212 (46%), Positives = 140/212 (66%), Gaps = 1/212 (0%) Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84 K+E P+ + M+ + T+P P ++R FK E+ +E+WKRN YV LK + IC Sbjct: 43 ASPKSEQPIPAATLALMEARDTTPDAPILMRAFKKESEIEVWKRNRSGRYVFLKSFPICR 102 Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144 WSG GPK+ GD Q+PEGFY +G +NPNS Y+LS + GFPN +DKAH +G+ LM+H Sbjct: 103 WSGKLGPKVAQGDRQSPEGFYSVGPRQMNPNSAYYLSFDTGFPNAYDKAHGASGSALMVH 162 Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 G C+SAGCYAM +K + EI+A+ R++LRG Q+ Q QA+PF+MT++N+ Y+ +PN F Sbjct: 163 GTCSSAGCYAMTDKGVAEIFALAREALRG-GQNAFQFQAYPFKMTAQNLARYRADPNIGF 221 Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 W LK G D FE +E + ++N +YVF Sbjct: 222 WRQLKEGFDRFEATGEELGVGVVNGRYVFAPS 253 >gi|218662493|ref|ZP_03518423.1| hypothetical protein RetlI_25155 [Rhizobium etli IE4771] Length = 214 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 104/198 (52%), Positives = 140/198 (70%), Gaps = 1/198 (0%) Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100 M K P +IRIFK E +EIWK D + + +YKICAWSG GPK++TGD QA Sbjct: 1 MSAKGMDRNSPIMIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQA 60 Query: 101 PEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQM 160 PEGFY + NLNPNSKY+L+IN GFPN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ Sbjct: 61 PEGFYDLTRANLNPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQV 120 Query: 161 QEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQ 220 EIYA RD+ +G Q+ +Q+QAFPFRMT++NM ++ + NY FW MLK+G+D FE + Sbjct: 121 LEIYAFARDAFKG-GQATVQLQAFPFRMTAENMVKHRLDSNYEFWKMLKVGYDNFEVTKR 179 Query: 221 EPFIQIINKQYVFFKGQT 238 P + + K+YVF + T Sbjct: 180 PPEVNVCEKKYVFNQQAT 197 >gi|170743408|ref|YP_001772063.1| hypothetical protein M446_5308 [Methylobacterium sp. 4-46] gi|168197682|gb|ACA19629.1| protein of unknown function DUF949 [Methylobacterium sp. 4-46] Length = 415 Score = 297 bits (761), Expect = 9e-79, Method: Composition-based stats. Identities = 89/217 (41%), Positives = 132/217 (60%), Gaps = 1/217 (0%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80 ++ L K P+ + M + T+P P ++R FK E +E+W R D + LK + Sbjct: 34 PAKHLSAKHLAPIPGPTLALMAARGTAPGAPILMRAFKKEAEIEVWTRGADGRFAHLKTF 93 Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGAD 140 IC WSG GPK +GD QAPEGFY I +NPNS+Y+LS ++G+PN +D+AH TG+ Sbjct: 94 PICRWSGQLGPKRRSGDRQAPEGFYSIRPAQMNPNSRYYLSFDVGYPNAYDRAHGGTGSA 153 Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNP 200 LM+HG C+SAGC+AM + Q+ EI+A+ R++ G Q+ Q QA+PFRM++ + ++ +P Sbjct: 154 LMVHGTCSSAGCFAMTDAQVSEIFALAREAFAG-GQAAFQFQAYPFRMSAAALARHRLDP 212 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 N FW LK G D FE +EP + + +Y F Sbjct: 213 NIDFWRQLKEGADRFEATGREPLVTVAGGRYAFAPYP 249 >gi|254500008|ref|ZP_05112161.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] gi|222441475|gb|EEE48152.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] Length = 345 Score = 296 bits (759), Expect = 2e-78, Method: Composition-based stats. Identities = 96/237 (40%), Positives = 140/237 (59%), Gaps = 3/237 (1%) Query: 3 NRYNILLFALF-IFLNGC-HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R + +F + L GC S + + E + + M+ K P IRIFK E Sbjct: 13 RRVLSVSMTIFTLLLAGCVGSSLEMESRGEIAIPYKVTALMRNKGVKGSDPVFIRIFKQE 72 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + LE+WK+ +YVLLK Y++C WSG GPK GD QAPEG Y + LNPNSKYFL Sbjct: 73 SELEVWKKRRAGDYVLLKTYEMCRWSGDLGPKRAEGDRQAPEGIYEVTLGRLNPNSKYFL 132 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 S ++G+PN+ ++A +G LM+HG C+S+GC+A+ ++Q+ E+YA+VRD+LR Q +Q Sbjct: 133 SFDLGYPNKLERAKGYSGTALMVHGACSSSGCFAITDEQITEVYALVRDALRA-GQPSVQ 191 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 +Q+ PFRMT +N+ + +NPN SFW LK FE + P + +Y F + Sbjct: 192 VQSLPFRMTPENLARHYDNPNLSFWLDLKEASTTFEVLRRPPEFRFCEGRYRFGAAK 248 >gi|13473087|ref|NP_104654.1| hypothetical protein mlr3577 [Mesorhizobium loti MAFF303099] gi|14023835|dbj|BAB50440.1| mlr3577 [Mesorhizobium loti MAFF303099] Length = 395 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 93/190 (48%), Positives = 126/190 (66%), Gaps = 1/190 (0%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 + RIFK E LEIWK + Y ++ Y IC WSG GPK GD QAPEGFY Sbjct: 1 MVRTSSVMARIFKEEGKLEIWKAKTNGRYDMVASYDICKWSGKLGPKYTEGDRQAPEGFY 60 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYA 165 + + +NP S Y LS NIGFPN +D+A+ RTG +LM+HG C+S+GCY+M + Q+++IYA Sbjct: 61 TVRPSQMNPRSNYHLSFNIGFPNAYDRANGRTGQNLMVHGACSSSGCYSMTDAQIEQIYA 120 Query: 166 IVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQ 225 RD+ +G Q+ Q++AFPFRMT+ NM Y+N+PNY FW MLK+G+D FE P + Sbjct: 121 FGRDAFQG-GQTEFQVEAFPFRMTAANMARYRNDPNYEFWKMLKVGYDNFEVTKVPPKVD 179 Query: 226 IINKQYVFFK 235 + K+YVF + Sbjct: 180 VCEKRYVFNQ 189 >gi|319899485|ref|YP_004159582.1| hypothetical protein BARCL_1352 [Bartonella clarridgeiae 73] gi|319403453|emb|CBI77024.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 231 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 107/219 (48%), Positives = 138/219 (63%), Gaps = 3/219 (1%) Query: 18 GCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 C S K E PL + + M + P ++R FK ENI EIWK+N +V Sbjct: 2 ACQERLPTSFRAKIEQPLPQEVFNKMAMYDIDQYAPIMMRFFKEENIAEIWKQNRSGVFV 61 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 L+ Y IC WSG GPK GD QAPEGFY I N +NP SKY+LS NIGFPN +D+ H Sbjct: 62 LVISYNICKWSGQLGPKYREGDFQAPEGFYTIQANQMNPYSKYYLSFNIGFPNLYDRIHG 121 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 RTG+ +M+HG C+S GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ Sbjct: 122 RTGSYIMVHGACSSVGCYSMNDRNMAQIYAFARDAFRG-GQKEFQLHAFPFRMTDANMQR 180 Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + NP+Y FW MLK G+D+FE N + P I + +K+Y+F Sbjct: 181 HHANPHYKFWKMLKEGYDFFEINRKPPRISVYDKRYIFD 219 >gi|254470197|ref|ZP_05083601.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Pseudovibrio sp. JE062] gi|211960508|gb|EEA95704.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Pseudovibrio sp. JE062] Length = 247 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 87/228 (38%), Positives = 129/228 (56%), Gaps = 2/228 (0%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 + +FA ++ L + + K + L + K P +R+FK E+ LE W Sbjct: 21 LAVFATYLLLPYDLPGSANLTKVKEERLPALRADLTFKGMELGSPVFLRVFKEESRLEAW 80 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 R+ Y K ++IC +SG GPK++ GD Q+PEGFY + LNPNS+Y LS N+GF Sbjct: 81 IRS-GETYHPYKSWEICKYSGDLGPKLKEGDGQSPEGFYNVSARQLNPNSQYHLSFNLGF 139 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN FD++ RTG+ LM+HG C S GCYAM N+ ++EIY +V +L+ Q + + FPF Sbjct: 140 PNTFDQSMGRTGSYLMVHGNCLSIGCYAMTNQHIEEIYLLVEAALQS-GQGTVPVHIFPF 198 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 MT +N+ + ++ + FW LK G+D FE+N P + QY F Sbjct: 199 EMTEENLSKHSSSKWHPFWRNLKQGYDLFEQNRIPPAVSAQEGQYQFT 246 >gi|294635173|ref|ZP_06713681.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] gi|291091435|gb|EFE23996.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] Length = 240 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 86/238 (36%), Positives = 129/238 (54%), Gaps = 12/238 (5%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M+ +L L + L C S S +L+ P I+IFK E Sbjct: 1 MSKIVTLLAICLALPLAACKSSASESGSVPRSGVNSLL----------GSPVYIQIFKEE 50 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 LE++ + + Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+ Sbjct: 51 RQLELYAKVQNG-YQLVKRFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQ 109 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIG+PN +D+AH +G LMIHG+C S GCYAM N + EIY V+ + R N Q + Sbjct: 110 AINIGYPNPYDQAHGYSGKYLMIHGDCVSVGCYAMTNAGISEIYRYVQSAFR-NGQMLVD 168 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 I +PF MT +NMQ ++N+ +FW L+ G+ YF ++ P + + + +YV Sbjct: 169 INIYPFHMTERNMQRHRNSSYINFWRELQPGYQYFAQHALPPQVNVQDGRYVVNAPLP 226 >gi|159185833|ref|NP_356981.2| hypothetical protein Atu3631 [Agrobacterium tumefaciens str. C58] gi|159140967|gb|AAK89766.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 379 Score = 292 bits (748), Expect = 3e-77, Method: Composition-based stats. Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 1/190 (0%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 P +IRIFK E LEIWK D + + Y+ICAWSG GPK++ GD QAPEGFY Sbjct: 1 MDRNSPIMIRIFKEEGALEIWKARRDNRFEKIAGYEICAWSGKLGPKVKEGDRQAPEGFY 60 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYA 165 + +LNPNSKY+L+IN GFPN +D A+ R G +LMIHG C+S+GCY+M + Q+ EIY Sbjct: 61 NLTPAHLNPNSKYYLAINTGFPNRYDAANGRNGTNLMIHGACSSSGCYSMTDAQILEIYG 120 Query: 166 IVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQ 225 RD+ +G Q +Q+QAFPFRMT++NM ++ + + FW MLK+G+D FE + P + Sbjct: 121 FARDAFKG-GQKTVQLQAFPFRMTAENMARHRKSEHLEFWKMLKVGYDNFEVTKRPPDVN 179 Query: 226 IINKQYVFFK 235 + K+YVF + Sbjct: 180 VCEKKYVFNQ 189 >gi|145600128|ref|YP_001164204.1| hypothetical protein YPDSF_2869 [Yersinia pestis Pestoides F] gi|145211824|gb|ABP41231.1| hypothetical protein YPDSF_2869 [Yersinia pestis Pestoides F] Length = 246 Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats. Identities = 91/232 (39%), Positives = 133/232 (57%), Gaps = 10/232 (4%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ I C + S A P++ +S + K+ I+IFK E +LE+ Sbjct: 4 IALLFAMII----CLPAASFTSSASEPVA----VSKELKQQLLGSSVYIQIFKEERVLEL 55 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIG Sbjct: 56 YAK-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIG 114 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +P Sbjct: 115 FPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAF-IFGQEKVDISIYP 173 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FRMT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV Sbjct: 174 FRMTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 225 >gi|51595236|ref|YP_069427.1| hypothetical protein YPTB0886 [Yersinia pseudotuberculosis IP 32953] gi|153950202|ref|YP_001402128.1| hypothetical protein YpsIP31758_3169 [Yersinia pseudotuberculosis IP 31758] gi|186894254|ref|YP_001871366.1| hypothetical protein YPTS_0928 [Yersinia pseudotuberculosis PB1/+] gi|51588518|emb|CAH20126.1| putative exported protein [Yersinia pseudotuberculosis IP 32953] gi|152961697|gb|ABS49158.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 31758] gi|186697280|gb|ACC87909.1| protein of unknown function DUF949 [Yersinia pseudotuberculosis PB1/+] Length = 246 Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats. Identities = 91/232 (39%), Positives = 133/232 (57%), Gaps = 10/232 (4%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ I C + S A P++ +S + K+ I+IFK E +LE+ Sbjct: 4 IALLFAMII----CLPAASFTSSASEPVA----VSKELKQQLLGSSVYIQIFKEERVLEL 55 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIG Sbjct: 56 YAK-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYSINTRHLKPDSQFYRAINIG 114 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +P Sbjct: 115 FPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAF-IFGQEKVDISIYP 173 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FRMT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV Sbjct: 174 FRMTEQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 225 >gi|269138138|ref|YP_003294838.1| hypothetical protein ETAE_0782 [Edwardsiella tarda EIB202] gi|267983798|gb|ACY83627.1| hypothetical protein ETAE_0782 [Edwardsiella tarda EIB202] Length = 240 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 88/238 (36%), Positives = 129/238 (54%), Gaps = 12/238 (5%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +L L + L C S S A +L+ I+IFK E Sbjct: 1 MGKIVAMLAICLALPLAACKSSASESGTAPRSGVNSLL----------GSQVYIQIFKEE 50 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 LE++ + D +Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+ Sbjct: 51 RQLELYAKVQD-KYQLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQ 109 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIG+PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R Q+ + Sbjct: 110 AINIGYPNSFDQSHGYSGKYLMIHGDCVSVGCYAMTNDGISEIYRYVQSAFR-RGQTLVN 168 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 I +PFRMT KNMQ ++N+ FW L+ G+ YF ++ P + + + +YV Sbjct: 169 INIYPFRMTDKNMQRHRNSSYIGFWRQLQPGYQYFAQHALPPQVNVQDGRYVVNGPLP 226 >gi|258544108|ref|ZP_05704342.1| lipoprotein [Cardiobacterium hominis ATCC 15826] gi|258520616|gb|EEV89475.1| lipoprotein [Cardiobacterium hominis ATCC 15826] Length = 453 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 92/208 (44%), Positives = 130/208 (62%), Gaps = 1/208 (0%) Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90 P + L ++ + P IRIFK E +LE+W + EY L +Y IC +SG G Sbjct: 34 RPPNPTLQDRLEARGFRFGAPAFIRIFKKEEVLEVWLQKDSGEYALFLDYPICIYSGELG 93 Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150 PK GD+Q+PEGFY +G +NPNS+Y LS N+G+PN +D+AH +G+ LM+HG+C S Sbjct: 94 PKTREGDKQSPEGFYAVGREAMNPNSQYHLSFNLGYPNAYDRAHGYSGSMLMVHGKCVSI 153 Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210 GCYAM ++Q++EIY +V +L+ Q ++++ AFPFRMT N+ Y + Y FW MLK Sbjct: 154 GCYAMGDRQIEEIYTLVGSALQ-RGQPYVRVHAFPFRMTDANLAAYSEHRWYDFWRMLKP 212 Query: 211 GHDYFEKNHQEPFIQIINKQYVFFKGQT 238 G+DYFE+ HQ P I +I QY Sbjct: 213 GYDYFERYHQPPEIDVIGGQYALSGRNP 240 >gi|90419248|ref|ZP_01227158.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336185|gb|EAS49926.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 362 Score = 291 bits (744), Expect = 8e-77, Method: Composition-based stats. Identities = 92/224 (41%), Positives = 132/224 (58%), Gaps = 3/224 (1%) Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71 I L S+ + A L+ + ++ T P ++RIFK E+ LE+W++ D Sbjct: 43 TAITLLSIGGCVSITEDAYTDLAPATLAVAER--TRPEGSILMRIFKEESELEVWRQGAD 100 Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131 Y L K + +C WSG GPK GD QAPEGFY + + +NPNSKY S N+G+PN+ + Sbjct: 101 GRYALHKTHPMCRWSGRLGPKTADGDRQAPEGFYQVTASLMNPNSKYHRSFNLGYPNQLE 160 Query: 132 KAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191 +A TG LM+HG C+SAGC+AM + + E+YA + + R QS Q+Q+FPFRMT++ Sbjct: 161 RALGYTGDSLMVHGACSSAGCFAMTDNGVAEVYAEAQSAFRI-GQSDFQVQSFPFRMTAE 219 Query: 192 NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 M +Q +PN FW LKLG+D FE +EP + +YVF Sbjct: 220 QMAKHQGDPNIEFWRNLKLGYDVFEVTRREPTVAACGGRYVFDA 263 >gi|123443424|ref|YP_001007397.1| hypothetical protein YE3221 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090385|emb|CAL13253.1| putative exported protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 249 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 94/231 (40%), Positives = 138/231 (59%), Gaps = 10/231 (4%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67 ++FA+ I C + S A P++ +S + K+ I+IFK E LE++ Sbjct: 3 IMFAMII----CLPAVSFTSSASEPVA----VSKELKQQLLGSSVYIQIFKEERTLELYA 54 Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127 R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFP Sbjct: 55 R-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINIGFP 113 Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187 N++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I +PFR Sbjct: 114 NDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAF-IFGQEKVDISIYPFR 172 Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 MT +NMQ ++N+ +YSFW L+ G+ YF KN P + +IN QYV + T Sbjct: 173 MTEQNMQRHRNSSDYSFWRQLQPGYAYFAKNRMPPSVSVINGQYVLSRPPT 223 >gi|318604536|emb|CBY26034.1| putative exported protein STY0357 [Yersinia enterocolitica subsp. palearctica Y11] Length = 257 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 92/234 (39%), Positives = 138/234 (58%), Gaps = 10/234 (4%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 + ++FA+ I L + S + A +S + K+ I+IFK E LE Sbjct: 8 FVTIMFAMIICLPAVSFTSSASEPA--------AVSKELKQQLLGSSVYIQIFKEERTLE 59 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 ++ R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INI Sbjct: 60 LYAR-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINI 118 Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 GFPN++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I + Sbjct: 119 GFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAF-IFGQEKVDISIY 177 Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 PFRMT +NMQ ++N+ +Y+FW L+ G++YF KN P + +IN QYV + T Sbjct: 178 PFRMTEQNMQRHRNSSDYNFWRQLQPGYEYFAKNRIPPSVSVINGQYVLSRPPT 231 >gi|170025523|ref|YP_001722028.1| hypothetical protein YPK_3306 [Yersinia pseudotuberculosis YPIII] gi|169752057|gb|ACA69575.1| protein of unknown function DUF949 [Yersinia pseudotuberculosis YPIII] Length = 246 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 91/232 (39%), Positives = 133/232 (57%), Gaps = 10/232 (4%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ I C + S A P++ +S + K+ I+IFK E +LE+ Sbjct: 4 IALLFAMII----CLPAASFTSSASEPVA----VSKELKQQLLGSSVYIQIFKEERVLEL 55 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIG Sbjct: 56 YAK-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYSINTRHLKPDSQFYRAINIG 114 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +P Sbjct: 115 FPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAF-IFGQEKVDISIYP 173 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FRMT +NMQ ++N+ +FW L+ G+ YF KN P + + N QYV Sbjct: 174 FRMTKQNMQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 225 >gi|45440541|ref|NP_992080.1| hypothetical protein YP_0691 [Yersinia pestis biovar Microtus str. 91001] gi|45435398|gb|AAS60957.1| putative exported protein [Yersinia pestis biovar Microtus str. 91001] Length = 250 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 10/232 (4%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ I C + S A P++ +S + K+ I+IFK E +LE+ Sbjct: 8 IALLFAMII----CLPAASFTSSASEPVA----VSKELKQQLLGSSVYIQIFKEERVLEL 59 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIG Sbjct: 60 YAK-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIG 118 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +P Sbjct: 119 FPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAF-IFGQEKVDISIYP 177 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FRMT +N+Q ++N+ +FW L+ G+ YF KN P + + N QYV Sbjct: 178 FRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 229 >gi|108808723|ref|YP_652639.1| hypothetical protein YPA_2732 [Yersinia pestis Antiqua] gi|149364916|ref|ZP_01886951.1| putative exported protein [Yersinia pestis CA88-4125] gi|162420212|ref|YP_001607663.1| hypothetical protein YpAngola_A3319 [Yersinia pestis Angola] gi|165926620|ref|ZP_02222452.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936078|ref|ZP_02224648.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010974|ref|ZP_02231872.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166212890|ref|ZP_02238925.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167398650|ref|ZP_02304174.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421605|ref|ZP_02313358.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167467189|ref|ZP_02331893.1| hypothetical protein YpesF_04645 [Yersinia pestis FV-1] gi|218930268|ref|YP_002348143.1| hypothetical protein YPO3241 [Yersinia pestis CO92] gi|229838849|ref|ZP_04459008.1| secreted protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895999|ref|ZP_04511169.1| secreted protein [Yersinia pestis Pestoides A] gi|229899418|ref|ZP_04514561.1| secreted protein [Yersinia pestis biovar Orientalis str. India 195] gi|294504957|ref|YP_003569019.1| hypothetical protein YPZ3_2847 [Yersinia pestis Z176003] gi|108780636|gb|ABG14694.1| hypothetical protein YPA_2732 [Yersinia pestis Antiqua] gi|115348879|emb|CAL21835.1| putative exported protein [Yersinia pestis CO92] gi|149291329|gb|EDM41403.1| putative exported protein [Yersinia pestis CA88-4125] gi|162353027|gb|ABX86975.1| conserved hypothetical protein [Yersinia pestis Angola] gi|165916223|gb|EDR34830.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|165921548|gb|EDR38745.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165989974|gb|EDR42275.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205677|gb|EDR50157.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166960524|gb|EDR56545.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051154|gb|EDR62562.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|229687820|gb|EEO79893.1| secreted protein [Yersinia pestis biovar Orientalis str. India 195] gi|229695215|gb|EEO85262.1| secreted protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700922|gb|EEO88951.1| secreted protein [Yersinia pestis Pestoides A] gi|262363021|gb|ACY59742.1| hypothetical protein YPD4_2835 [Yersinia pestis D106004] gi|262366945|gb|ACY63502.1| hypothetical protein YPD8_2829 [Yersinia pestis D182038] gi|294355416|gb|ADE65757.1| hypothetical protein YPZ3_2847 [Yersinia pestis Z176003] Length = 246 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 10/232 (4%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ I C + S A P++ +S + K+ I+IFK E +LE+ Sbjct: 4 IALLFAMII----CLPAASFTSSASEPVA----VSKELKQQLLGSSVYIQIFKEERVLEL 55 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + + EY L++ Y IC +SG GPK GD ++PEGFY I +L P+S+++ +INIG Sbjct: 56 YAK-LQGEYRLVQSYPICEFSGGLGPKRREGDFKSPEGFYRINTRHLKPDSQFYRAINIG 114 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++DK+ +G LMIHG C S GCYAM + M EI+ VR + Q + I +P Sbjct: 115 FPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVRTAF-IFGQEKVDISIYP 173 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FRMT +N+Q ++N+ +FW L+ G+ YF KN P + + N QYV Sbjct: 174 FRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKNRMPPPVSVSNGQYVLSPPP 225 >gi|293392677|ref|ZP_06636996.1| hypothetical protein HMPREF0758_0332 [Serratia odorifera DSM 4582] gi|291424794|gb|EFE98004.1| hypothetical protein HMPREF0758_0332 [Serratia odorifera DSM 4582] Length = 258 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 93/234 (39%), Positives = 132/234 (56%), Gaps = 11/234 (4%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 LLFA+ + + E P+ + + P I+IFK E Sbjct: 1 MSRIALLFAMLFSMPMITACSASEQVPETPVVKQQL---------LGSPVYIQIFKEERK 51 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 LE++ + + E+ L+ + IC +SG GPK GD ++PEGFY + +L P+SKY+ +I Sbjct: 52 LELYAK-MGNEFRLVNTFPICNYSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAI 110 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN++D++ +GA LMIHGEC S GCYAM N M EIY V + QS + I Sbjct: 111 NIGFPNDYDRSQGYSGAYLMIHGECKSIGCYAMTNDYMDEIYRYVEAAF-AYGQSRVNIS 169 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT +N+Q ++++ SFW LK G+DYF KNHQ P + + N QYV K Sbjct: 170 IYPFRMTEQNLQRHRSSTYASFWRQLKPGYDYFVKNHQPPMMGVANGQYVLGKP 223 >gi|332160663|ref|YP_004297240.1| hypothetical protein YE105_C1041 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664893|gb|ADZ41537.1| hypothetical protein YE105_C1041 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862520|emb|CBX72677.1| uncharacterized protein yafK [Yersinia enterocolitica W22703] Length = 251 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 92/234 (39%), Positives = 138/234 (58%), Gaps = 10/234 (4%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 + ++FA+ I L + S + A +S + K+ I+IFK E LE Sbjct: 8 FVTIMFAMIICLPAVSFTSSASEPA--------AVSKELKQQLLGSSVYIQIFKEERTLE 59 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 ++ R + EY L++ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INI Sbjct: 60 LYAR-LQGEYRLVQSYRICEFSGGLGPKRREGDFKSPEGFYTIDMRHLKPDSKFYRAINI 118 Query: 125 GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 GFPN++DK+ +G LMIHG C S GCYAM + M EI+ V+ + Q + I + Sbjct: 119 GFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDAYMDEIFNYVQTAF-IFGQEKVDISIY 177 Query: 185 PFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 PFRMT +NMQ ++N+ +Y+FW L+ G++YF KN P + +IN QYV + T Sbjct: 178 PFRMTEQNMQRHRNSSDYNFWRQLQPGYEYFAKNRIPPSVSVINGQYVLSRPPT 231 >gi|146328753|ref|YP_001209058.1| lipoprotein [Dichelobacter nodosus VCS1703A] gi|146232223|gb|ABQ13201.1| hypothetical lipoprotein [Dichelobacter nodosus VCS1703A] Length = 248 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 92/248 (37%), Positives = 140/248 (56%), Gaps = 13/248 (5%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHP---LSENLI--------ISMQKKRTSPFHP 51 NR ++ F+L ++ C + + E P L + ++ + P Sbjct: 2 NRLFLIFFSLLALIS-CRAPEQNVVREEAPFSRLPAGVQNWWNLPLARHLEVRGFQLGAP 60 Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 +RIFK E +LE+W + D Y L +++ ICA+SG GPK+ GD+QAPEG YY+G + Sbjct: 61 VFVRIFKEERVLELWLKKDDDRYHLYQKFPICAFSGQLGPKVRRGDKQAPEGIYYVGLSQ 120 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171 LNPNS++ L+ N+GFPN +D+AH TG LM+HG C S GCYAM ++Q++EIY I+ +L Sbjct: 121 LNPNSRFHLAFNLGFPNLYDRAHGYTGDYLMVHGNCVSNGCYAMGDEQIEEIYQIIEAAL 180 Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231 + Q + + FPF +T N+ YQ + Y FW MLK +DYFE P +Q+ +Y Sbjct: 181 -WHGQPSVPVHIFPFPLTPANLAKYQYHRWYDFWQMLKPAYDYFEHYATPPVVQVNAGRY 239 Query: 232 VFFKGQTI 239 ++ Sbjct: 240 ELNHILSV 247 >gi|319406363|emb|CBI80004.1| conserved hypothetical protein [Bartonella sp. AR 15-3] Length = 231 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 106/219 (48%), Positives = 137/219 (62%), Gaps = 3/219 (1%) Query: 18 GCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 C S K L ++ M + P ++R FK +NI EIWK+N +V Sbjct: 2 ACQERLPTSFKAKIAQSLPREILDKMAIHDIDQYAPIMMRFFKEDNIAEIWKQNRSGVFV 61 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 L+ Y IC WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H Sbjct: 62 LVVSYDICKWSGQLGPKYREGDLQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHG 121 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 RTG+ LM+HG CAS GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ Sbjct: 122 RTGSYLMVHGACASVGCYSMNDRNMAQIYAFARDAFRG-GQKEFQLHAFPFRMTDVNMQR 180 Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + +P+Y FW MLK G+D+FE+N + P I + NK+YVF Sbjct: 181 HHMSPHYEFWMMLKEGYDFFERNRKPPKITVYNKRYVFD 219 >gi|170747478|ref|YP_001753738.1| hypothetical protein Mrad2831_1046 [Methylobacterium radiotolerans JCM 2831] gi|170654000|gb|ACB23055.1| protein of unknown function DUF949 [Methylobacterium radiotolerans JCM 2831] Length = 397 Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 130/206 (63%), Gaps = 2/206 (0%) Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 P+ + M +K + P + R +K E+ +E+WK+ YV +K + IC WSG GP Sbjct: 32 PIPAATLALMAQKGVTAASPVLFRAYKKESEIEVWKKGAAG-YVYIKTFPICRWSGQLGP 90 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAG 151 K +GD Q PEGFY + +NPNS Y+LS ++G+PN +D+AH TG+ +M+HG C+S G Sbjct: 91 KRRSGDRQTPEGFYSVPRRQMNPNSHYYLSFDVGYPNAYDRAHGGTGSAVMVHGICSSMG 150 Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211 C+AM N + EIYAI RD+L G Q+ Q Q++PFRMT++NM ++ +PN +FW LK G Sbjct: 151 CFAMTNGTVGEIYAIARDALNG-GQAAFQFQSYPFRMTAENMARHRTDPNIAFWRDLKAG 209 Query: 212 HDYFEKNHQEPFIQIINKQYVFFKGQ 237 D FE + +E + ++ +Y F + Sbjct: 210 SDRFEVSREELQVSVVAGRYAFAPAR 235 >gi|319404880|emb|CBI78481.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 231 Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats. Identities = 104/218 (47%), Positives = 137/218 (62%), Gaps = 3/218 (1%) Query: 18 GCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 C S K E L ++ M + P ++R FK +NI EIWK+N +V Sbjct: 2 ACQERLPTSFKAKIEQSLPREILNKMAMNDIDQYAPIMMRFFKKDNIAEIWKQNRSGVFV 61 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 L+ Y IC WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H Sbjct: 62 LVVSYDICKWSGQLGPKYREGDFQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHG 121 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 RTG+ LM+HG C+S GCY+MN++ M +IYA RD+ +G Q Q+ AFPFRMT NMQ Sbjct: 122 RTGSYLMVHGACSSVGCYSMNDRNMAQIYAFARDAFKG-GQKEFQLHAFPFRMTDANMQR 180 Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 + +P+Y FW MLK G+D+FE N + P I + +K+YVF Sbjct: 181 HYTSPHYEFWMMLKEGYDFFETNRKPPKITVYDKRYVF 218 >gi|325498730|gb|EGC96589.1| hypothetical protein ECD227_2827 [Escherichia fergusonii ECD227] Length = 244 Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats. Identities = 99/236 (41%), Positives = 137/236 (58%), Gaps = 7/236 (2%) Query: 5 YNILLFALFIFL-----NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 ILLFA+ I L + +S+ E P+S + ++ K P IRIFK Sbjct: 7 LYILLFAVVIALGVHFFWPVPNEKSVFLPLEKPVSHSPVVQPS-KVIHPGDQLFIRIFKA 65 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 66 EDKLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 125 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ Q + Sbjct: 126 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKS-GQKSV 184 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 185 PVHIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRYKITP 240 >gi|194432691|ref|ZP_03064976.1| conserved hypothetical protein [Shigella dysenteriae 1012] gi|194418953|gb|EDX35037.1| conserved hypothetical protein [Shigella dysenteriae 1012] gi|332094988|gb|EGJ00027.1| hypothetical protein SB521682_0312 [Shigella boydii 5216-82] gi|332097308|gb|EGJ02289.1| hypothetical protein SD15574_0703 [Shigella dysenteriae 155-74] Length = 246 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 93/234 (39%), Positives = 135/234 (57%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L QS +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQSSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|110804363|ref|YP_687883.1| hypothetical protein SFV_0304 [Shigella flexneri 5 str. 8401] gi|110613911|gb|ABF02578.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 246 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 133/234 (56%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYFE+ + P + + N +YV K Sbjct: 173 IYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVANGRYVVSKP 226 >gi|304558183|gb|ADM40847.1| hypothetical protein ETAF_0725 [Edwardsiella tarda FL6-60] Length = 234 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 87/232 (37%), Positives = 128/232 (55%), Gaps = 12/232 (5%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +L L + L C S S A +L+ I+IFK E LE++ Sbjct: 1 MLAICLALPLAACKSSASESGTAPRSGVNSLL----------GSQVYIQIFKEERQLELY 50 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 + D +Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+ +INIG+ Sbjct: 51 AKVQD-KYQLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQAINIGY 109 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R Q+ + I +PF Sbjct: 110 PNSFDQSHGYSGKYLMIHGDCVSVGCYAMTNDGISEIYRYVQSAFR-RGQTLVNINIYPF 168 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 RMT KNMQ ++N+ FW L+ G+ YF ++ P + + + +YV Sbjct: 169 RMTDKNMQRHRNSSYIGFWRQLQPGYQYFAQHALPPQVNVQDGRYVVNGPLP 220 >gi|157369197|ref|YP_001477186.1| hypothetical protein Spro_0952 [Serratia proteamaculans 568] gi|157320961|gb|ABV40058.1| protein of unknown function DUF949 [Serratia proteamaculans 568] Length = 256 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 11/231 (4%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ + + E P+ + ++ P I+IFK E LE+ Sbjct: 4 IALLFAMLFSMPMITACSASEQVPEVPVVKQQLV---------GSPVYIQIFKEERTLEL 54 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + + E+ L+ ++IC +SG GPK GD ++PEGFY + +L P+SKY+ +INIG Sbjct: 55 YAK-MGNEFRLVNSFQICNFSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAINIG 113 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++DK+ +GA LMIHGEC S GCYAM N M EIY V + QS I I +P Sbjct: 114 FPNDYDKSQGYSGAYLMIHGECKSIGCYAMTNTYMDEIYRYVEAAF-AYGQSRIDISIYP 172 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 FRMT KN++ + ++ +FW LK G+DYF KNHQ P + + N QYV + Sbjct: 173 FRMTDKNLKRHSSSSYIAFWRQLKPGYDYFVKNHQPPMVSVANGQYVLGQP 223 >gi|331664773|ref|ZP_08365678.1| putative inner membrane protein [Escherichia coli TA143] gi|331058021|gb|EGI30003.1| putative inner membrane protein [Escherichia coli TA143] Length = 239 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 94/243 (38%), Positives = 133/243 (54%), Gaps = 14/243 (5%) Query: 1 MTNRYNILLFALFIFLN-------GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV 53 M + + + L +F+ H + E P++ +L K P Sbjct: 1 MGRKGLLAIVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSL------KIIHPGDQLF 54 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 IRI K E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LN Sbjct: 55 IRILKAEDKLELWASTNNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLN 114 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173 PNS+Y L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Sbjct: 115 PNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS 174 Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 Q + + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 175 -GQKSVPVHIFPFAMNEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKI 233 Query: 234 FKG 236 Sbjct: 234 SPT 236 >gi|284923183|emb|CBG36277.1| putative exported protein [Escherichia coli 042] Length = 239 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 94/244 (38%), Positives = 133/244 (54%), Gaps = 14/244 (5%) Query: 1 MTNRYNILLFALFIFLN-------GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV 53 M + + + L +F+ H + E P++ +L K P Sbjct: 1 MGRKGLLAIVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSL------KIIHPGDQLF 54 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 IRI K E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LN Sbjct: 55 IRILKAEDKLELWASTNNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKELLN 114 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173 PNS+Y L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Sbjct: 115 PNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS 174 Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 Q + + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 175 -GQKSVPVHIFPFAMDEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKI 233 Query: 234 FKGQ 237 Sbjct: 234 SPTT 237 >gi|218547671|ref|YP_002381462.1| hypothetical protein EFER_0250 [Escherichia fergusonii ATCC 35469] gi|218355212|emb|CAQ87819.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469] Length = 246 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 92/234 (39%), Positives = 134/234 (57%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|205354181|ref|YP_002227982.1| hypothetical protein SG3168 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205273962|emb|CAR38967.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629302|gb|EGE35645.1| Putative membrane protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 239 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 130/238 (54%), Gaps = 2/238 (0%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAE-HPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M + + + L +F+ L E L ++ K P IRI K Sbjct: 1 MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKTVASSLKIIHPGDQLFIRILKA 60 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 61 EDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q + Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS-GQKRV 179 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 180 PVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTT 237 >gi|24111717|ref|NP_706227.1| hypothetical protein SF0274 [Shigella flexneri 2a str. 301] gi|30061843|ref|NP_836014.1| hypothetical protein S0295 [Shigella flexneri 2a str. 2457T] gi|24050497|gb|AAN41934.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30040087|gb|AAP15820.1| hypothetical protein S0295 [Shigella flexneri 2a str. 2457T] gi|281599636|gb|ADA72620.1| hypothetical protein SFxv_0291 [Shigella flexneri 2002017] gi|332761624|gb|EGJ91904.1| hypothetical protein SF434370_0458 [Shigella flexneri 4343-70] gi|332761650|gb|EGJ91929.1| hypothetical protein SF274771_0338 [Shigella flexneri 2747-71] gi|332764441|gb|EGJ94674.1| hypothetical protein SFK671_0303 [Shigella flexneri K-671] gi|332768573|gb|EGJ98755.1| hypothetical protein SF293071_0385 [Shigella flexneri 2930-71] gi|333008739|gb|EGK28203.1| hypothetical protein SFK218_0538 [Shigella flexneri K-218] gi|333009705|gb|EGK29155.1| hypothetical protein SFVA6_0548 [Shigella flexneri VA-6] gi|333010776|gb|EGK30202.1| hypothetical protein SFK272_0599 [Shigella flexneri K-272] gi|333021274|gb|EGK40527.1| hypothetical protein SFK227_0257 [Shigella flexneri K-227] gi|333022083|gb|EGK41326.1| hypothetical protein SFK304_0403 [Shigella flexneri K-304] Length = 246 Score = 286 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 133/234 (56%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYFE+ + P + + N +YV K Sbjct: 173 IYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVANGRYVVSKP 226 >gi|156935266|ref|YP_001439182.1| hypothetical protein ESA_03118 [Cronobacter sakazakii ATCC BAA-894] gi|156533520|gb|ABU78346.1| hypothetical protein ESA_03118 [Cronobacter sakazakii ATCC BAA-894] Length = 245 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 86/234 (36%), Positives = 132/234 (56%), Gaps = 9/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R LL A+ + ++ + ++ + P+ + K+ P I+IFK E Sbjct: 1 MRKIALLIAMLL-VSCFSWASTVSSDSVTPI------KKELKQQLMGSPVYIQIFKEERT 53 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 LE++ + + +Y LL Y+IC +SG GPK GD ++PEGFY + + L P+S+++ +I Sbjct: 54 LELYVK-MGEQYQLLDSYRICNYSGGLGPKRRQGDFKSPEGFYSVQRSQLKPDSRFYKAI 112 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN FD+A+ G LMIHG C S GCYAM +K + EI+ V +L Q ++Q+ Sbjct: 113 NIGFPNAFDRANGYEGKYLMIHGACVSVGCYAMTDKNIDEIFQFVTGALV-FGQPNVQVS 171 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYF Q P + ++N YV K Sbjct: 172 IYPFRMTDANMERHKYSYYIGFWKQLKPGYDYFMATRQPPVVSVVNGSYVVSKP 225 >gi|26246272|ref|NP_752311.1| hypothetical protein c0374 [Escherichia coli CFT073] gi|227884755|ref|ZP_04002560.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Escherichia coli 83972] gi|300977425|ref|ZP_07173891.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|301045870|ref|ZP_07193057.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|331656306|ref|ZP_08357268.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA206] gi|331681646|ref|ZP_08382279.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H299] gi|26106670|gb|AAN78855.1|AE016756_38 Hypothetical protein yafK precursor [Escherichia coli CFT073] gi|227838356|gb|EEJ48822.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Escherichia coli 83972] gi|300302120|gb|EFJ58505.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300409835|gb|EFJ93373.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|307552159|gb|ADN44934.1| probable membrane protein [Escherichia coli ABU 83972] gi|315295167|gb|EFU54502.1| conserved hypothetical protein [Escherichia coli MS 153-1] gi|315300869|gb|EFU60091.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331054554|gb|EGI26563.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA206] gi|331080848|gb|EGI52013.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H299] Length = 246 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|319407839|emb|CBI81492.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 231 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 108/218 (49%), Positives = 138/218 (63%), Gaps = 3/218 (1%) Query: 18 GCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 C S K E L ++ M + P ++R FK +NI EIWK+N +V Sbjct: 2 ACQERLPTSFKAKIEQSLPREILNKMAMYDIDQYAPIMMRFFKEDNIAEIWKQNRSGVFV 61 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 L+ Y IC WSG GPK GD QAPEGFY + N +NP SKY+LS NIGFPN +D+ H Sbjct: 62 LVVSYGICKWSGQLGPKYREGDFQAPEGFYTVQENQMNPYSKYYLSFNIGFPNLYDQIHG 121 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 RTG+ LM+HG CAS GCY+MN++ M +IYA RD+ RG Q Q+ AFPFRMT NMQ Sbjct: 122 RTGSYLMVHGACASVGCYSMNDRNMAQIYAFARDAFRG-GQKEFQLHAFPFRMTDANMQR 180 Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 + NP+Y FW MLK G+D+FEKN + P I + +K+YVF Sbjct: 181 HYTNPHYEFWMMLKEGYDFFEKNRKPPKITVYDKRYVF 218 >gi|15799929|ref|NP_285941.1| hypothetical protein Z0282 [Escherichia coli O157:H7 EDL933] gi|15829505|ref|NP_308278.1| hypothetical protein ECs0251 [Escherichia coli O157:H7 str. Sakai] gi|16128210|ref|NP_414759.1| conserved protein [Escherichia coli str. K-12 substr. MG1655] gi|74310866|ref|YP_309285.1| hypothetical protein SSON_0266 [Shigella sonnei Ss046] gi|82542817|ref|YP_406764.1| hypothetical protein SBO_0215 [Shigella boydii Sb227] gi|82775615|ref|YP_401962.1| hypothetical protein SDY_0250 [Shigella dysenteriae Sd197] gi|89107099|ref|AP_000879.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110] gi|91209312|ref|YP_539298.1| hypothetical protein UTI89_C0264 [Escherichia coli UTI89] gi|110640461|ref|YP_668189.1| hypothetical protein ECP_0254 [Escherichia coli 536] gi|117622528|ref|YP_851441.1| hypothetical protein APECO1_1743 [Escherichia coli APEC O1] gi|157156909|ref|YP_001461413.1| hypothetical protein EcE24377A_0256 [Escherichia coli E24377A] gi|157159707|ref|YP_001457025.1| hypothetical protein EcHS_A0252 [Escherichia coli HS] gi|168750207|ref|ZP_02775229.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4113] gi|168757252|ref|ZP_02782259.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4401] gi|168763465|ref|ZP_02788472.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4501] gi|168770022|ref|ZP_02795029.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4486] gi|168776136|ref|ZP_02801143.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4196] gi|168782984|ref|ZP_02807991.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4076] gi|168789696|ref|ZP_02814703.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC869] gi|168800338|ref|ZP_02825345.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC508] gi|170021388|ref|YP_001726342.1| hypothetical protein EcolC_3396 [Escherichia coli ATCC 8739] gi|170079853|ref|YP_001729173.1| hypothetical protein ECDH10B_0206 [Escherichia coli str. K-12 substr. DH10B] gi|170680694|ref|YP_001742344.1| hypothetical protein EcSMS35_0235 [Escherichia coli SMS-3-5] gi|187731026|ref|YP_001879020.1| hypothetical protein SbBS512_E0219 [Shigella boydii CDC 3083-94] gi|188494558|ref|ZP_03001828.1| conserved hypothetical protein [Escherichia coli 53638] gi|191165732|ref|ZP_03027571.1| conserved hypothetical protein [Escherichia coli B7A] gi|191171355|ref|ZP_03032904.1| conserved hypothetical protein [Escherichia coli F11] gi|193063243|ref|ZP_03044334.1| conserved hypothetical protein [Escherichia coli E22] gi|193068636|ref|ZP_03049597.1| conserved hypothetical protein [Escherichia coli E110019] gi|194427590|ref|ZP_03060138.1| conserved hypothetical protein [Escherichia coli B171] gi|194438191|ref|ZP_03070283.1| conserved hypothetical protein [Escherichia coli 101-1] gi|195938627|ref|ZP_03084009.1| hypothetical protein EscherichcoliO157_19732 [Escherichia coli O157:H7 str. EC4024] gi|208808317|ref|ZP_03250654.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4206] gi|208813045|ref|ZP_03254374.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4045] gi|208818968|ref|ZP_03259288.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4042] gi|209400375|ref|YP_002268852.1| hypothetical protein ECH74115_0267 [Escherichia coli O157:H7 str. EC4115] gi|209917436|ref|YP_002291520.1| hypothetical protein ECSE_0245 [Escherichia coli SE11] gi|215485377|ref|YP_002327808.1| hypothetical protein E2348C_0221 [Escherichia coli O127:H6 str. E2348/69] gi|217324922|ref|ZP_03441006.1| conserved hypothetical protein [Escherichia coli O157:H7 str. TW14588] gi|218552829|ref|YP_002385742.1| hypothetical protein ECIAI1_0264 [Escherichia coli IAI1] gi|218557182|ref|YP_002390095.1| hypothetical protein ECS88_0261 [Escherichia coli S88] gi|218688119|ref|YP_002396331.1| hypothetical protein ECED1_0258 [Escherichia coli ED1a] gi|218693708|ref|YP_002401375.1| hypothetical protein EC55989_0248 [Escherichia coli 55989] gi|218698832|ref|YP_002406461.1| hypothetical protein ECIAI39_0428 [Escherichia coli IAI39] gi|218703497|ref|YP_002411016.1| hypothetical protein ECUMN_0245 [Escherichia coli UMN026] gi|237707757|ref|ZP_04538238.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238899616|ref|YP_002925412.1| hypothetical protein BWG_0210 [Escherichia coli BW2952] gi|253774752|ref|YP_003037583.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160340|ref|YP_003043448.1| hypothetical protein ECB_00219 [Escherichia coli B str. REL606] gi|254791383|ref|YP_003076220.1| secreted protein [Escherichia coli O157:H7 str. TW14359] gi|256020199|ref|ZP_05434064.1| secreted protein [Shigella sp. D9] gi|256024132|ref|ZP_05437997.1| secreted protein [Escherichia sp. 4_1_40B] gi|260842470|ref|YP_003220248.1| hypothetical protein ECO103_0240 [Escherichia coli O103:H2 str. 12009] gi|260853439|ref|YP_003227330.1| hypothetical protein ECO26_0240 [Escherichia coli O26:H11 str. 11368] gi|260866384|ref|YP_003232786.1| hypothetical protein ECO111_0246 [Escherichia coli O111:H- str. 11128] gi|261223721|ref|ZP_05938002.1| secreted protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255870|ref|ZP_05948403.1| hypothetical protein EscherichiacoliO157EcO_08563 [Escherichia coli O157:H7 str. FRIK966] gi|291281068|ref|YP_003497886.1| hypothetical protein G2583_0260 [Escherichia coli O55:H7 str. CB9615] gi|293403327|ref|ZP_06647418.1| yafK protein [Escherichia coli FVEC1412] gi|293408342|ref|ZP_06652181.1| conserved hypothetical protein [Escherichia coli B354] gi|293413502|ref|ZP_06656151.1| yafK protein [Escherichia coli B185] gi|293418341|ref|ZP_06660776.1| yafK protein [Escherichia coli B088] gi|297516867|ref|ZP_06935253.1| hypothetical protein EcolOP_04451 [Escherichia coli OP50] gi|298378939|ref|ZP_06988820.1| yafK protein [Escherichia coli FVEC1302] gi|300817300|ref|ZP_07097518.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300823437|ref|ZP_07103567.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|300896713|ref|ZP_07115223.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300902530|ref|ZP_07120508.1| hypothetical protein HMPREF9536_00702 [Escherichia coli MS 84-1] gi|300919505|ref|ZP_07136003.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300921963|ref|ZP_07138109.1| hypothetical protein HMPREF9548_00243 [Escherichia coli MS 182-1] gi|300929530|ref|ZP_07144996.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300936093|ref|ZP_07151034.1| conserved hypothetical protein [Escherichia coli MS 21-1] gi|300947280|ref|ZP_07161483.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300955698|ref|ZP_07168048.1| hypothetical protein HMPREF9547_01562 [Escherichia coli MS 175-1] gi|300991167|ref|ZP_07179510.1| hypothetical protein HMPREF9553_03801 [Escherichia coli MS 200-1] gi|301019115|ref|ZP_07183319.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|301302026|ref|ZP_07208159.1| hypothetical protein HMPREF9347_00593 [Escherichia coli MS 124-1] gi|301325431|ref|ZP_07218917.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|301646781|ref|ZP_07246635.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|306813332|ref|ZP_07447525.1| hypothetical protein ECNC101_15507 [Escherichia coli NC101] gi|307136829|ref|ZP_07496185.1| hypothetical protein EcolH7_01679 [Escherichia coli H736] gi|307315226|ref|ZP_07594805.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W] gi|309787090|ref|ZP_07681702.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|309797867|ref|ZP_07692249.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|312964717|ref|ZP_07778968.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312970348|ref|ZP_07784529.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|331640684|ref|ZP_08341831.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H736] gi|331645390|ref|ZP_08346494.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M605] gi|331651155|ref|ZP_08352180.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M718] gi|331661622|ref|ZP_08362545.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA143] gi|331666518|ref|ZP_08367392.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA271] gi|331671775|ref|ZP_08372571.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA280] gi|331675908|ref|ZP_08376625.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H591] gi|332281361|ref|ZP_08393774.1| conserved hypothetical protein [Shigella sp. D9] gi|76365082|sp|P0AA99|YAFK_ECOLI RecName: Full=Putative L,D-transpeptidase YafK; Flags: Precursor gi|90101608|sp|P0AAA0|YAFK_ECO57 RecName: Full=Putative L,D-transpeptidase YafK; Flags: Precursor gi|12512995|gb|AAG54549.1|AE005201_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|984580|dbj|BAA07586.1| YafK [Escherichia coli W3110] gi|1552794|gb|AAB08646.1| hypothetical [Escherichia coli] gi|1786418|gb|AAC73328.1| conserved protein [Escherichia coli str. K-12 substr. MG1655] gi|4902960|dbj|BAA77894.1| conserved hypothetical protein [Escherichia coli str. K12 substr. W3110] gi|13359708|dbj|BAB33674.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|59889755|emb|CAH19110.1| Hypothetical exported protein [Escherichia coli] gi|73854343|gb|AAZ87050.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|81239763|gb|ABB60473.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|81244228|gb|ABB64936.1| conserved hypothetical protein [Shigella boydii Sb227] gi|91070886|gb|ABE05767.1| probable membrane protein [Escherichia coli UTI89] gi|110342053|gb|ABG68290.1| putative periplasmic protein [Escherichia coli 536] gi|115511652|gb|ABI99726.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|157065387|gb|ABV04642.1| conserved hypothetical protein [Escherichia coli HS] gi|157078939|gb|ABV18647.1| conserved hypothetical protein [Escherichia coli E24377A] gi|169756316|gb|ACA79015.1| protein of unknown function DUF949 [Escherichia coli ATCC 8739] gi|169887688|gb|ACB01395.1| conserved protein [Escherichia coli str. K-12 substr. DH10B] gi|170518412|gb|ACB16590.1| conserved hypothetical protein [Escherichia coli SMS-3-5] gi|187428018|gb|ACD07292.1| conserved hypothetical protein [Shigella boydii CDC 3083-94] gi|187768412|gb|EDU32256.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4196] gi|188015594|gb|EDU53716.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4113] gi|188489757|gb|EDU64860.1| conserved hypothetical protein [Escherichia coli 53638] gi|188999628|gb|EDU68614.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4076] gi|189355746|gb|EDU74165.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4401] gi|189361102|gb|EDU79521.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4486] gi|189366356|gb|EDU84772.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4501] gi|189370756|gb|EDU89172.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC869] gi|189377308|gb|EDU95724.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC508] gi|190904239|gb|EDV63949.1| conserved hypothetical protein [Escherichia coli B7A] gi|190908289|gb|EDV67879.1| conserved hypothetical protein [Escherichia coli F11] gi|192931151|gb|EDV83754.1| conserved hypothetical protein [Escherichia coli E22] gi|192957999|gb|EDV88441.1| conserved hypothetical protein [Escherichia coli E110019] gi|194414360|gb|EDX30634.1| conserved hypothetical protein [Escherichia coli B171] gi|194422855|gb|EDX38850.1| conserved hypothetical protein [Escherichia coli 101-1] gi|208728118|gb|EDZ77719.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4206] gi|208734322|gb|EDZ83009.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4045] gi|208739091|gb|EDZ86773.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4042] gi|209161775|gb|ACI39208.1| conserved hypothetical protein [Escherichia coli O157:H7 str. EC4115] gi|209745414|gb|ACI71014.1| hypothetical protein ECs0251 [Escherichia coli] gi|209745416|gb|ACI71015.1| hypothetical protein ECs0251 [Escherichia coli] gi|209745418|gb|ACI71016.1| hypothetical protein ECs0251 [Escherichia coli] gi|209745420|gb|ACI71017.1| hypothetical protein ECs0251 [Escherichia coli] gi|209745422|gb|ACI71018.1| hypothetical protein ECs0251 [Escherichia coli] gi|209910695|dbj|BAG75769.1| conserved hypothetical protein [Escherichia coli SE11] gi|215263449|emb|CAS07769.1| predicted protein [Escherichia coli O127:H6 str. E2348/69] gi|217321143|gb|EEC29567.1| conserved hypothetical protein [Escherichia coli O157:H7 str. TW14588] gi|218350440|emb|CAU96127.1| conserved hypothetical protein [Escherichia coli 55989] gi|218359597|emb|CAQ97138.1| conserved hypothetical protein [Escherichia coli IAI1] gi|218363951|emb|CAR01616.1| conserved hypothetical protein [Escherichia coli S88] gi|218368818|emb|CAR16566.1| conserved hypothetical protein [Escherichia coli IAI39] gi|218425683|emb|CAR06473.1| conserved hypothetical protein [Escherichia coli ED1a] gi|218430594|emb|CAR11460.1| conserved hypothetical protein [Escherichia coli UMN026] gi|222032074|emb|CAP74813.1| Uncharacterized protein yafK [Escherichia coli LF82] gi|226898967|gb|EEH85226.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238860270|gb|ACR62268.1| conserved protein [Escherichia coli BW2952] gi|242376055|emb|CAQ30740.1| conserved protein [Escherichia coli BL21(DE3)] gi|253325796|gb|ACT30398.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972241|gb|ACT37912.1| hypothetical protein ECB_00219 [Escherichia coli B str. REL606] gi|253976450|gb|ACT42120.1| hypothetical protein ECD_00219 [Escherichia coli BL21(DE3)] gi|254590783|gb|ACT70144.1| secreted protein [Escherichia coli O157:H7 str. TW14359] gi|257752088|dbj|BAI23590.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368] gi|257757617|dbj|BAI29114.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009] gi|257762740|dbj|BAI34235.1| conserved predicted protein [Escherichia coli O111:H- str. 11128] gi|260450580|gb|ACX41002.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1] gi|281177441|dbj|BAI53771.1| conserved hypothetical protein [Escherichia coli SE15] gi|284920018|emb|CBG33074.1| putative exported protein [Escherichia coli 042] gi|290760941|gb|ADD54902.1| hypothetical protein G2583_0260 [Escherichia coli O55:H7 str. CB9615] gi|291324869|gb|EFE64284.1| yafK protein [Escherichia coli B088] gi|291429180|gb|EFF02200.1| yafK protein [Escherichia coli FVEC1412] gi|291433560|gb|EFF06533.1| yafK protein [Escherichia coli B185] gi|291471520|gb|EFF14003.1| conserved hypothetical protein [Escherichia coli B354] gi|294492959|gb|ADE91715.1| conserved hypothetical protein [Escherichia coli IHE3034] gi|298280052|gb|EFI21556.1| yafK protein [Escherichia coli FVEC1302] gi|300305605|gb|EFJ60125.1| hypothetical protein HMPREF9553_03801 [Escherichia coli MS 200-1] gi|300317449|gb|EFJ67233.1| hypothetical protein HMPREF9547_01562 [Escherichia coli MS 175-1] gi|300359433|gb|EFJ75303.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300399374|gb|EFJ82912.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300405401|gb|EFJ88939.1| hypothetical protein HMPREF9536_00702 [Escherichia coli MS 84-1] gi|300413399|gb|EFJ96709.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300421633|gb|EFK04944.1| hypothetical protein HMPREF9548_00243 [Escherichia coli MS 182-1] gi|300453081|gb|EFK16701.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300458742|gb|EFK22235.1| conserved hypothetical protein [Escherichia coli MS 21-1] gi|300462529|gb|EFK26022.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300524055|gb|EFK45124.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|300530276|gb|EFK51338.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300842578|gb|EFK70338.1| hypothetical protein HMPREF9347_00593 [Escherichia coli MS 124-1] gi|300847729|gb|EFK75489.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|301075016|gb|EFK89822.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|305854095|gb|EFM54534.1| hypothetical protein ECNC101_15507 [Escherichia coli NC101] gi|306905407|gb|EFN35944.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W] gi|307628272|gb|ADN72576.1| hypothetical protein UM146_16085 [Escherichia coli UM146] gi|308118551|gb|EFO55813.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|308924668|gb|EFP70163.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|310336997|gb|EFQ02135.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|312290738|gb|EFR18616.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312944850|gb|ADR25677.1| hypothetical protein NRG857_01235 [Escherichia coli O83:H1 str. NRG 857C] gi|315059459|gb|ADT73786.1| conserved protein [Escherichia coli W] gi|315134909|dbj|BAJ42068.1| hypothetical protein ECDH1ME8569_0212 [Escherichia coli DH1] gi|315253705|gb|EFU33673.1| putative lipoprotein [Escherichia coli MS 85-1] gi|315287788|gb|EFU47190.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|315616857|gb|EFU97474.1| conserved hypothetical protein [Escherichia coli 3431] gi|320174233|gb|EFW49395.1| hypothetical protein SDB_03258 [Shigella dysenteriae CDC 74-1112] gi|320186546|gb|EFW61273.1| hypothetical protein SGF_01254 [Shigella flexneri CDC 796-83] gi|320190225|gb|EFW64875.1| hypothetical protein ECoD_01636 [Escherichia coli O157:H7 str. EC1212] gi|320197292|gb|EFW71908.1| hypothetical protein EcoM_00488 [Escherichia coli WV_060327] gi|320201157|gb|EFW75740.1| hypothetical protein ECoL_01583 [Escherichia coli EC4100B] gi|320638272|gb|EFX08000.1| hypothetical protein ECO5101_15460 [Escherichia coli O157:H7 str. G5101] gi|320643553|gb|EFX12720.1| hypothetical protein ECO9389_09877 [Escherichia coli O157:H- str. 493-89] gi|320648968|gb|EFX17566.1| hypothetical protein ECO2687_16241 [Escherichia coli O157:H- str. H 2687] gi|320654668|gb|EFX22669.1| hypothetical protein ECO7815_10427 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660236|gb|EFX27746.1| hypothetical protein ECO5905_08953 [Escherichia coli O55:H7 str. USDA 5905] gi|320665485|gb|EFX32547.1| hypothetical protein ECOSU61_12655 [Escherichia coli O157:H7 str. LSU-61] gi|323158023|gb|EFZ44124.1| hypothetical protein ECEPECA14_0131 [Escherichia coli EPECa14] gi|323160311|gb|EFZ46264.1| hypothetical protein ECE128010_3457 [Escherichia coli E128010] gi|323169550|gb|EFZ55222.1| hypothetical protein SS53G_0154 [Shigella sonnei 53G] gi|323171030|gb|EFZ56679.1| hypothetical protein ECLT68_4353 [Escherichia coli LT-68] gi|323178524|gb|EFZ64102.1| hypothetical protein ECOK1180_3037 [Escherichia coli 1180] gi|323181517|gb|EFZ66937.1| hypothetical protein ECOK1357_5081 [Escherichia coli 1357] gi|323191507|gb|EFZ76768.1| hypothetical protein ECRN5871_0177 [Escherichia coli RN587/1] gi|323379983|gb|ADX52251.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11] gi|323938769|gb|EGB35015.1| ykud domain-containing protein [Escherichia coli E1520] gi|323943343|gb|EGB39496.1| ykud domain-containing protein [Escherichia coli E482] gi|323945376|gb|EGB41430.1| ykud domain-containing protein [Escherichia coli H120] gi|323952649|gb|EGB48518.1| ykud domain-containing protein [Escherichia coli H252] gi|323958685|gb|EGB54386.1| ykud domain-containing protein [Escherichia coli H263] gi|323965208|gb|EGB60666.1| ykud domain-containing protein [Escherichia coli M863] gi|323972404|gb|EGB67611.1| ykud domain-containing protein [Escherichia coli TA007] gi|323975957|gb|EGB71051.1| ykud domain-containing protein [Escherichia coli TW10509] gi|324010196|gb|EGB79415.1| hypothetical protein HMPREF9532_00019 [Escherichia coli MS 57-2] gi|324015561|gb|EGB84780.1| hypothetical protein HMPREF9533_00340 [Escherichia coli MS 60-1] gi|324019964|gb|EGB89183.1| hypothetical protein HMPREF9542_01343 [Escherichia coli MS 117-3] gi|324115590|gb|EGC09529.1| ykud domain-containing protein [Escherichia coli E1167] gi|326338772|gb|EGD62591.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str. 1044] gi|326342441|gb|EGD66221.1| hypothetical protein ECF_02950 [Escherichia coli O157:H7 str. 1125] gi|327254523|gb|EGE66139.1| hypothetical protein ECSTEC7V_0277 [Escherichia coli STEC_7v] gi|330910067|gb|EGH38577.1| putative exported protein [Escherichia coli AA86] gi|331040058|gb|EGI12266.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H736] gi|331045552|gb|EGI17678.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M605] gi|331050896|gb|EGI22948.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli M718] gi|331060044|gb|EGI32008.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA143] gi|331065742|gb|EGI37626.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA271] gi|331070764|gb|EGI42123.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli TA280] gi|331076468|gb|EGI47745.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Escherichia coli H591] gi|332093730|gb|EGI98785.1| hypothetical protein SB359474_2408 [Shigella boydii 3594-74] gi|332103713|gb|EGJ07059.1| conserved hypothetical protein [Shigella sp. D9] gi|332341577|gb|AEE54911.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 246 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|16766575|ref|NP_462190.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62181788|ref|YP_218205.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167990158|ref|ZP_02571258.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197263468|ref|ZP_03163542.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16421836|gb|AAL22149.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62129421|gb|AAX67124.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197241723|gb|EDY24343.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205331143|gb|EDZ17907.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261248443|emb|CBG26280.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995473|gb|ACY90358.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159827|emb|CBW19346.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914303|dbj|BAJ38277.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225961|gb|EFX51015.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322716275|gb|EFZ07846.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131637|gb|ADX19067.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332990135|gb|AEF09118.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 239 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 130/238 (54%), Gaps = 2/238 (0%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAE-HPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M + + + L +F+ L E L ++ K P IRI K Sbjct: 1 MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKA 60 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 61 EDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q + Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS-GQKSV 179 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 180 PVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTT 237 >gi|152968812|ref|YP_001333921.1| hypothetical protein KPN_00238 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238893215|ref|YP_002917949.1| hypothetical protein KP1_1082 [Klebsiella pneumoniae NTUH-K2044] gi|262044042|ref|ZP_06017122.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330005719|ref|ZP_08305359.1| hypothetical protein HMPREF9538_03043 [Klebsiella sp. MS 92-3] gi|150953661|gb|ABR75691.1| hypothetical protein KPN_00238 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238545531|dbj|BAH61882.1| hypothetical protein KP1_1082 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259038614|gb|EEW39805.1| conserved hypothetical protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328536141|gb|EGF62528.1| hypothetical protein HMPREF9538_03043 [Klebsiella sp. MS 92-3] Length = 246 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L A+ + L + L S +S + K+ P I IFK E + Sbjct: 1 MRKIALFIAMLL-LPCVSFAGLLSS-----NSPTTPVSKEYKQQLMGSPVYIEIFKEERM 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + Y LL Y+IC +SG GPK GD ++PEGFY + + L P+S+++ +I Sbjct: 55 LDLYVK-MGETYQLLDSYRICNYSGGLGPKQRQGDFKSPEGFYNVTRSQLKPDSRFYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM + + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSVGCYAMTDSGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT+ NM+ ++ + FW LK G+DYF++ H+ P + + + +YV K Sbjct: 173 IYPFRMTNANMERHKYSYYADFWKQLKPGYDYFQQTHKPPVVSVTDGRYVVSKP 226 >gi|206580035|ref|YP_002240293.1| hypothetical protein KPK_4495 [Klebsiella pneumoniae 342] gi|288936999|ref|YP_003441058.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22] gi|290509937|ref|ZP_06549307.1| hypothetical protein HMPREF0485_01707 [Klebsiella sp. 1_1_55] gi|206569093|gb|ACI10869.1| conserved hypothetical protein [Klebsiella pneumoniae 342] gi|288891708|gb|ADC60026.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22] gi|289776653|gb|EFD84651.1| hypothetical protein HMPREF0485_01707 [Klebsiella sp. 1_1_55] Length = 246 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L A+ + L + L S +S + K+ P I IFK E + Sbjct: 1 MRKIALFIAMLL-LPCVSFAGLLSS-----NSPTTPVSKEYKQQLMGSPVYIEIFKEERM 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + Y LL Y+IC +SG GPK GD ++PEGFY + + L P+S+++ +I Sbjct: 55 LDLYVK-MGETYQLLDSYRICNYSGGLGPKQRQGDFKSPEGFYSVTRSQLKPDSRFYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM + + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSVGCYAMTDSGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT+ NM+ ++ + FW LK G+DYF++ H+ P + + + +YV K Sbjct: 173 IYPFRMTNANMERHKYSYYADFWKQLKPGYDYFQQTHKPPIVSVTDGRYVVSKP 226 >gi|323963534|gb|EGB59092.1| ykud domain-containing protein [Escherichia coli H489] Length = 246 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGDQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|270263442|ref|ZP_06191711.1| hypothetical protein SOD_e00660 [Serratia odorifera 4Rx13] gi|270042326|gb|EFA15421.1| hypothetical protein SOD_e00660 [Serratia odorifera 4Rx13] Length = 255 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 91/231 (39%), Positives = 135/231 (58%), Gaps = 11/231 (4%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ + + E P+ + ++ P I+IFK E LE+ Sbjct: 4 IALLFAMLFSMPMITACSASEQVPEAPVVKQQLV---------GSPVYIQIFKEERTLEL 54 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + + E+ L+ ++IC +SG GPK GD ++PEGFY + +L P+SKY+ +INIG Sbjct: 55 YAK-MGNEFRLVNSFRICNFSGGLGPKRREGDFKSPEGFYSVDARHLKPDSKYYRAINIG 113 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++DK+ +GA LMIHGEC S GCYAM N M EIY V + Q+ I I +P Sbjct: 114 FPNDYDKSQGYSGAYLMIHGECKSIGCYAMTNTYMDEIYRYVEAAF-AYGQNRIDISIYP 172 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 FRMT +N++ ++++ + +FWN LK G+DYF KNH P + + N QYV + Sbjct: 173 FRMTEQNLKRHRSSSDIAFWNQLKPGYDYFVKNHLPPVVSVSNGQYVLGQP 223 >gi|315121782|ref|YP_004062271.1| hypothetical protein CKC_00160 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495184|gb|ADR51783.1| hypothetical protein CKC_00160 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 212 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 153/209 (73%), Positives = 187/209 (89%) Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84 ++DKAE+PL ++L+ M+KK+TSP+HP++IRIFK ENILEIWK DA+Y+LLK+YKICA Sbjct: 1 MVDKAEYPLPKSLVRYMEKKKTSPYHPSLIRIFKEENILEIWKYTYDAQYILLKQYKICA 60 Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144 WSG GPKIETGD Q+PEGFYYIGWNNLNPNSKY+LSINIGFPNEFD+ HNRTG D+MIH Sbjct: 61 WSGIIGPKIETGDRQSPEGFYYIGWNNLNPNSKYYLSINIGFPNEFDREHNRTGTDIMIH 120 Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 G C+SAGCYAMN+KQ+ EIYAI+RDSLRG MQS+IQ+QAFPFRMT +NM+ YQ +P+Y F Sbjct: 121 GGCSSAGCYAMNDKQILEIYAIIRDSLRGKMQSYIQVQAFPFRMTQENMKRYQTHPDYFF 180 Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 WN+LK+G+DYFE NH EP +Q++NKQYVF Sbjct: 181 WNILKIGYDYFENNHLEPIVQVLNKQYVF 209 >gi|260596636|ref|YP_003209207.1| hypothetical protein CTU_08440 [Cronobacter turicensis z3032] gi|260215813|emb|CBA28269.1| Uncharacterized protein yafK [Cronobacter turicensis z3032] Length = 256 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 86/234 (36%), Positives = 131/234 (55%), Gaps = 9/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R LL A+ + ++ + ++ + P+ + K+ P I+IFK E Sbjct: 12 MRKIALLIAMLL-VSCFSWASTVSSDSVTPI------KKELKQQLMGSPVYIQIFKEERK 64 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 LE++ + + +Y LL Y IC +SG GPK GD ++PEGFY + + L P+S+++ +I Sbjct: 65 LELYVK-MGEQYQLLDSYNICNYSGGLGPKRRQGDFKSPEGFYSVQRSQLKPDSRFYKAI 123 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN FD+A+ G LMIHG C S GCYAM +K + EI+ V +L Q ++Q+ Sbjct: 124 NIGFPNAFDRANGYEGKYLMIHGACVSVGCYAMTDKNIDEIFQFVTGALV-FGQPNVQVS 182 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYF Q P + ++N YV K Sbjct: 183 IYPFRMTDANMERHKYSYYIGFWKQLKPGYDYFMTTRQPPVVSVVNGSYVVSKP 236 >gi|170767696|ref|ZP_02902149.1| conserved hypothetical protein [Escherichia albertii TW07627] gi|170123184|gb|EDS92115.1| conserved hypothetical protein [Escherichia albertii TW07627] Length = 246 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 92/236 (38%), Positives = 133/236 (56%), Gaps = 10/236 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M IL + L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIAFIL----AMLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEE 52 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ Sbjct: 53 RTLDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYK 111 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q Sbjct: 112 AINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQ 170 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + +PFRMT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 171 VSIYPFRMTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPIVSVVNGRYVVSKP 226 >gi|198245601|ref|YP_002217251.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207858527|ref|YP_002245178.1| hypothetical protein SEN3112 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|197940117|gb|ACH77450.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206710330|emb|CAR34688.1| putative membrane protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326625028|gb|EGE31373.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 239 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 130/238 (54%), Gaps = 2/238 (0%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAE-HPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M + + + L +F+ L E L ++ K P IRI K Sbjct: 1 MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKA 60 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 61 EDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q + Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS-GQKRV 179 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 180 PVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTT 237 >gi|224582153|ref|YP_002635951.1| hypothetical protein SPC_0323 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224466680|gb|ACN44510.1| hypothetical protein SPC_0323 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 245 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 90/236 (38%), Positives = 130/236 (55%), Gaps = 11/236 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L + L C L+ S +S + K+ P I+IFK E Sbjct: 1 MRKIAFFL----AMLLMPCVSFAGLLSS-----SPVTPVSKEYKQQLMGSPVYIQIFKEE 51 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ Sbjct: 52 RTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYK 110 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q Sbjct: 111 AINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALV-FGQPSVQ 169 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K Sbjct: 170 VSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSKP 225 >gi|283784004|ref|YP_003363869.1| lipoprotein [Citrobacter rodentium ICC168] gi|282947458|emb|CBG87005.1| putative lipoprotein [Citrobacter rodentium ICC168] Length = 246 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 90/234 (38%), Positives = 131/234 (55%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L A+ L C L+ + S IS + K+ P I+IFK E Sbjct: 1 MRKIALFIAML--LIPCVSFAGLLGSS----SPTTPISKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRFYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NMQ ++ + FW LK G+DYFE+ + P + +++ +YV K Sbjct: 173 IYPFRMTDANMQRHKYSYYKDFWTQLKPGYDYFEQTRKPPTVSVVDGRYVVSKP 226 >gi|152992424|ref|YP_001358145.1| hypothetical protein SUN_0830 [Sulfurovum sp. NBC37-1] gi|151424285|dbj|BAF71788.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 294 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 96/201 (47%), Positives = 132/201 (65%), Gaps = 2/201 (0%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 L ++ IRIFK E +LE+W + D EY LLKEYKICA+SG GPK++ G Sbjct: 95 LKEALSHAGARVGDAVFIRIFKREALLEVWIKK-DGEYKLLKEYKICAYSGRLGPKLKEG 153 Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMN 156 D QAPEGFY + LNP+SK+ LS N+G+PN +D+A+ RTGA LM+HG C S GCYAM Sbjct: 154 DRQAPEGFYSVNRGRLNPHSKFHLSFNLGYPNAYDRAYGRTGAYLMVHGNCVSIGCYAMT 213 Query: 157 NKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFE 216 + +++EIY +V ++L+ Q +Q+ +PFRMT +NM Y + YSFW LK G+DYFE Sbjct: 214 DAKIEEIYMLVEEALK-KGQKRVQVHIYPFRMTPENMAAYSHYRWYSFWQNLKEGYDYFE 272 Query: 217 KNHQEPFIQIINKQYVFFKGQ 237 H P I + NK+Y+ + + Sbjct: 273 AEHLPPKISVENKRYIIGESE 293 >gi|309700456|emb|CBI99749.1| putative exported protein [Escherichia coli ETEC H10407] Length = 246 Score = 285 bits (730), Expect = 4e-75, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDTNMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|218550430|ref|YP_002384221.1| hypothetical protein EFER_3124 [Escherichia fergusonii ATCC 35469] gi|218357971|emb|CAQ90617.1| conserved Hypothetical protein [Escherichia fergusonii ATCC 35469] Length = 246 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 98/236 (41%), Positives = 136/236 (57%), Gaps = 7/236 (2%) Query: 5 YNILLFALFIFL-----NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 ILLFA+ I L + +S+ E P+S + ++ K P IRI K Sbjct: 9 LYILLFAVVIALGVHFFWPVPNEKSVFLPLEKPVSHSPVVQPS-KVIHPGDQLFIRILKA 67 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 68 EDKLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 127 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ Q + Sbjct: 128 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKS-GQKSV 186 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 187 PVHIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRYKITP 242 >gi|320178956|gb|EFW53918.1| hypothetical protein SGB_03903 [Shigella boydii ATCC 9905] Length = 246 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 94/234 (40%), Positives = 136/234 (58%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L QS +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQSSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NMQ ++ + FW LKLG+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDANMQRHKYSNFKDFWEQLKLGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|161616283|ref|YP_001590248.1| hypothetical protein SPAB_04088 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161365647|gb|ABX69415.1| hypothetical protein SPAB_04088 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 239 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 93/238 (39%), Positives = 131/238 (55%), Gaps = 2/238 (0%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAE-HPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M + + + L +F+ L E L ++ K P IRI K Sbjct: 1 MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKA 60 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 61 EDKLELWVSANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q ++ Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS-GQKNV 179 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 180 PVHIFPFTMDDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTT 237 >gi|283834482|ref|ZP_06354223.1| putative lipoprotein [Citrobacter youngae ATCC 29220] gi|291070029|gb|EFE08138.1| putative lipoprotein [Citrobacter youngae ATCC 29220] Length = 246 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 129/236 (54%), Gaps = 10/236 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L + L C L+ S +S + K+ P I+IFK E Sbjct: 1 MRKIAFFL----AMLLLPCVSFAGLLSSN----SPTAPVSKEYKQQLMGSPVYIQIFKEE 52 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + L P+S+++ Sbjct: 53 RTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRGQLKPDSRFYK 111 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q Sbjct: 112 AINIGFPNAYDRAHGYEGKYLMIHGACVSVGCYAMTDNGIDEIFQFVTGALV-FGQPSVQ 170 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + ++N +YV K Sbjct: 171 VSIYPFRMTDANMQRHKFSYYKDFWAQLKPGYDYFEQTHKPPTVSVVNGRYVISKP 226 >gi|307132284|ref|YP_003884300.1| hypothetical protein Dda3937_04297 [Dickeya dadantii 3937] gi|306529813|gb|ADM99743.1| conserved protein [Dickeya dadantii 3937] Length = 241 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 9/232 (3%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67 L A+ L S S ++ P +E P I+IFK E ILE++ Sbjct: 6 LSLAMLFVLPSVAISNSYANQVSPPATETTQQV-------AGSPVYIQIFKEERILELYA 58 Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127 R EY L++ Y IC +SG GPK+ GD ++PEGFY + L P+S Y+ +IN+GFP Sbjct: 59 R-TGNEYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLKQLKPDSHYYRAINVGFP 117 Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187 NE+D+AH +G LMIHGEC S GCYAM N+ + EIY V +LR N Q +++ +PFR Sbjct: 118 NEYDRAHGYSGRYLMIHGECVSIGCYAMTNQYIAEIYTYVEKALR-NGQQKVELAIYPFR 176 Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 M +NM+ + + Y FW+ L+ G+ YF + HQ P + ++N QYV + + Sbjct: 177 MNEQNMKRHSRSTYYKFWSQLQPGYAYFNRTHQPPAVSVLNGQYVVNQPAPV 228 >gi|296101420|ref|YP_003611566.1| hypothetical protein ECL_01056 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055879|gb|ADF60617.1| hypothetical protein ECL_01056 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 246 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 90/234 (38%), Positives = 130/234 (55%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L A+ L C L+ S +S + K+ P I+IFK E Sbjct: 1 MRKIALFIAML--LIPCVSFAGLLSSN----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +I Sbjct: 55 LDLFVK-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYNVQRNQLKPDSRFYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN FD+AH G LMIHG C S GCYAM + + EI+ V +L Q ++Q+ Sbjct: 114 NIGFPNAFDRAHGYEGKYLMIHGACVSIGCYAMTDSGIDEIFQFVTGALV-FGQPNVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM ++ + FW LK G+DYFE+ H+ P + +++ +YV K Sbjct: 173 IYPFRMTDANMARHKYSYYADFWKQLKPGYDYFEQTHKPPVVSVVDGRYVVSKP 226 >gi|238755088|ref|ZP_04616435.1| hypothetical protein yruck0001_22810 [Yersinia ruckeri ATCC 29473] gi|238706648|gb|EEP99018.1| hypothetical protein yruck0001_22810 [Yersinia ruckeri ATCC 29473] Length = 240 Score = 285 bits (729), Expect = 5e-75, Method: Composition-based stats. Identities = 93/227 (40%), Positives = 134/227 (59%), Gaps = 6/227 (2%) Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRN 69 L + L C + S+ A P++ + K+ I+IFK E LE++ R Sbjct: 4 ITLLLALIICLPAVSVTSSASEPVTMA----KELKQQLLGSSVYIQIFKEERTLELYAR- 58 Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE 129 + EY LL+ Y+IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFPN+ Sbjct: 59 LQGEYRLLQSYRICNFSGGLGPKRREGDFKSPEGFYSIDMQHLKPDSKFYRAINIGFPND 118 Query: 130 FDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMT 189 FDK+ +G LMIHG+C S GCYAM + M EI+ V+ + N QS + I +PFRMT Sbjct: 119 FDKSQGYSGKYLMIHGDCQSIGCYAMTDAYMDEIFNYVKMAF-INGQSKVDISIYPFRMT 177 Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +NMQ ++N+ +FW L+ G+ YF KN P + +IN QYV + Sbjct: 178 EQNMQRHRNSTYINFWRQLQPGYTYFAKNRMPPPVGVINGQYVINRP 224 >gi|301019012|ref|ZP_07183228.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|299882417|gb|EFI90628.1| conserved hypothetical protein [Escherichia coli MS 196-1] Length = 246 Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 91/234 (38%), Positives = 134/234 (57%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ L C L+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALILAML--LIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQHNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|168231886|ref|ZP_02656944.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194469493|ref|ZP_03075477.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197248083|ref|YP_002148204.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|194455857|gb|EDX44696.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197211786|gb|ACH49183.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205333905|gb|EDZ20669.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 239 Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 95/238 (39%), Positives = 130/238 (54%), Gaps = 2/238 (0%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEH-PLSENLIISMQKKRTSPFHPTVIRIFKN 59 M + + + L +F+ L EH L + K P IRI K Sbjct: 1 MGRKGLLAIVLLSLFIAFILKFFWLTPYDEHIYLPVEKPVVSSLKIIHPGDQLFIRILKA 60 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 61 EDKLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q + Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS-GQKSV 179 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + FPF M KNM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 180 PVHIFPFTMNDKNMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTT 237 >gi|253689656|ref|YP_003018846.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756234|gb|ACT14310.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 244 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 97/234 (41%), Positives = 134/234 (57%), Gaps = 6/234 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + L FA+ FL + + + A I+ + K+ P I+IFK E I Sbjct: 1 MQKIALSFAMLFFLPSLVVTSAASETA----PPLAPIAKELKQQLLGSPIYIQIFKEERI 56 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 E++ + V EY LL +Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +I Sbjct: 57 FELYAK-VGNEYRLLDQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAI 115 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN++DK+ +G LMIHGEC S GCYAM N M EIY +LR N Q I I Sbjct: 116 NIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTNTYMDEIYRYAEAALR-NGQPKIDIA 174 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT +NMQ ++N+ SFW L+ G+ YF +++Q P I + N QYV Sbjct: 175 IYPFRMTEQNMQRHRNSTYASFWKQLQPGYAYFNQHNQPPAITVFNGQYVVNPP 228 >gi|324115247|gb|EGC09211.1| ykud domain-containing protein [Escherichia fergusonii B253] Length = 246 Score = 284 bits (727), Expect = 8e-75, Method: Composition-based stats. Identities = 97/236 (41%), Positives = 135/236 (57%), Gaps = 7/236 (2%) Query: 5 YNILLFALFIFL-----NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 ILLFA+ I L + +S+ E P+S + ++ K IRI K Sbjct: 9 LYILLFAVVIALGVHFFWPVPNEKSVFLPLEKPVSHSPVVQPS-KVIHHGDQLFIRILKA 67 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 68 EDKLELWASANNKPYELYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 127 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY V +L+ Q + Sbjct: 128 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQRVAQALKS-GQKSV 186 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 187 PVHIFPFAMNDENMRQAQAWPEYNFWLMLKPGYDYFEKNRRLPIISVENRRYKITP 242 >gi|224585075|ref|YP_002638874.1| inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224469603|gb|ACN47433.1| putative inner membrane protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 239 Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 92/238 (38%), Positives = 129/238 (54%), Gaps = 2/238 (0%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAE-HPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M + + + L +F+ L E L ++ K P RI K Sbjct: 1 MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFTRILKA 60 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E+ LE+W + Y L K + ICAWSG GPK + GD ++PEGFY LNPNS+Y Sbjct: 61 EDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYH 120 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Q + Sbjct: 121 LAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS-GQKSV 179 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 180 PVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTT 237 >gi|218706781|ref|YP_002414300.1| hypothetical protein ECUMN_3641 [Escherichia coli UMN026] gi|293406771|ref|ZP_06650697.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298382511|ref|ZP_06992108.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300897922|ref|ZP_07116301.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|218433878|emb|CAR14795.1| conserved Hypothetical protein [Escherichia coli UMN026] gi|291426777|gb|EFE99809.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|298277651|gb|EFI19167.1| conserved hypothetical protein [Escherichia coli FVEC1302] gi|300358352|gb|EFJ74222.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 239 Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 94/244 (38%), Positives = 132/244 (54%), Gaps = 14/244 (5%) Query: 1 MTNRYNILLFALFIFLN-------GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV 53 M + + + L +F+ H + E P++ +L K P Sbjct: 1 MGRKGLLAIVLLSLFIAMIFQFFWPAPHDEHVFLPVEKPVAPSL------KIIHPGDQLF 54 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 IRI K E+ LE+W + Y L K ICAWSG GPK + GD ++PEGFY LN Sbjct: 55 IRILKAEDKLELWASTNNKPYELYKTRTICAWSGGLGPKHKQGDGKSPEGFYATNKELLN 114 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173 PNS+Y L+ NIG+PN +D+A+ TG +M+HG C SAGCYAM + ++EIY +V +L Sbjct: 115 PNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNS 174 Query: 174 NMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 Q + + FPF M +NM+ Q P Y+FW MLK G+DYFEKN + P I + N++Y Sbjct: 175 -GQKSVPVHIFPFAMDEENMRQAQVWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKI 233 Query: 234 FKGQ 237 Sbjct: 234 SPTT 237 >gi|311280788|ref|YP_003943019.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1] gi|308749983|gb|ADO49735.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1] Length = 246 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 88/234 (37%), Positives = 131/234 (55%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L A+ L C L+ S +S + K+ P I+IFK E Sbjct: 1 MRKIALFIAML--LIPCVSFAGLLSSN----SPTTPVSKEFKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + Y LL YKIC +SG GPK GD ++PEGFY + L P+S+++ +I Sbjct: 55 LDLYVK-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVTREQLKPDSRFYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L QS++Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGACVSIGCYAMTDSGIDEIFQFVTGALV-FGQSNVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM+ ++ + FW+ LK G+DYF + H+ P + +++ +YV K Sbjct: 173 IYPFRMTDANMERHKFSFYKDFWSQLKPGYDYFAQTHKPPMVSVVDGRYVVSKP 226 >gi|261340937|ref|ZP_05968795.1| conserved hypothetical protein [Enterobacter cancerogenus ATCC 35316] gi|288316795|gb|EFC55733.1| conserved hypothetical protein [Enterobacter cancerogenus ATCC 35316] Length = 246 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 89/234 (38%), Positives = 130/234 (55%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L A+ L C L+ S IS + K+ P I+IFK E Sbjct: 1 MRKIALFIAML--LIPCVSFAGLLSSN----SSTTPISKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + Y LL YKIC +SG GPK GD ++PEGFY + + L P+S+++ +I Sbjct: 55 LDLYVK-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYNVQRSQLKPDSRFYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN FD+AH G LMIHG C S GCYAM + + EI+ V +L Q ++Q+ Sbjct: 114 NIGFPNAFDRAHGYEGKYLMIHGACVSVGCYAMTDTGIDEIFQFVTGALV-FGQPNVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM ++ + FW LK G+DYFE+ H+ P + +++ +Y+ K Sbjct: 173 IYPFRMTDANMARHKYSYYADFWKQLKPGYDYFEQTHKPPVVSVVDGRYLVSKP 226 >gi|317493141|ref|ZP_07951564.1| ykud domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918801|gb|EFV40137.1| ykud domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 241 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 90/236 (38%), Positives = 136/236 (57%), Gaps = 12/236 (5%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +L + L C S S + PL + + P I+IFK E Sbjct: 1 MGKIIALLAVFFVLPLTSCSSSASEQAQ-NTPLVKQQL---------LGSPVYIQIFKEE 50 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 LE++ + D +Y L++ + IC +SG GPK GD ++PEGFY + +L PNSK++ Sbjct: 51 RKLELFAKVQD-KYQLVQSFNICKFSGGLGPKRTEGDFKSPEGFYQVDARHLKPNSKFYQ 109 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIG+PN +D+AH +G LMIHG+C S GCYAM N+ + +IY V+ + R N Q+ + Sbjct: 110 AINIGYPNAYDQAHGYSGKYLMIHGDCVSIGCYAMTNEGISQIYTYVQSAFR-NGQTLVN 168 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 I +PFRMT +NMQ ++N+ FW L+ G+ YF ++HQ P + ++N QYV + Sbjct: 169 INIYPFRMTEQNMQRHRNSDYLPFWKQLQPGYAYFNEHHQPPMVNVVNGQYVVNRP 224 >gi|50122394|ref|YP_051561.1| hypothetical protein ECA3471 [Pectobacterium atrosepticum SCRI1043] gi|49612920|emb|CAG76370.1| putative exported protein [Pectobacterium atrosepticum SCRI1043] Length = 244 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 96/234 (41%), Positives = 135/234 (57%), Gaps = 6/234 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + L FA+ FL S + A I+ + K+ P I+IFK E I Sbjct: 1 MQKIALSFAMLFFL----PSLVVTSAASEIAPPLAPIAKELKQQLLGSPIYIQIFKEERI 56 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 E++ + V EY LL++Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +I Sbjct: 57 FELYAK-VGNEYRLLEQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAI 115 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN++DK+ +G LMIHGEC S GCYAM N M EIY +LR + Q+ I I Sbjct: 116 NIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTNNYMDEIYRYADAALR-HGQAKIDIA 174 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT +NMQ ++++ SFW L+ G+ YF +++Q P I + N QYV Sbjct: 175 IYPFRMTEQNMQRHRSSTYASFWKQLQPGYTYFNQHNQPPAITVFNGQYVVNPP 228 >gi|227113590|ref|ZP_03827246.1| hypothetical protein PcarbP_11527 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 244 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 96/234 (41%), Positives = 133/234 (56%), Gaps = 6/234 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + L FA+ FL S + A I+ + K+ P I+IFK E I Sbjct: 1 MQKIALSFAMLFFL----PSLVVTSAASEIAPPLAPIAKELKQQLLGSPIYIQIFKEERI 56 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 E++ + V EY LL +Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +I Sbjct: 57 FELYAK-VGNEYRLLDQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAI 115 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN++DK+ +G LMIHGEC S GCYAM N M EIY +LR N Q+ I I Sbjct: 116 NIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTNTYMDEIYRYAEAALR-NGQAKIDIA 174 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT +NM ++N+ SFW L+ G+ YF +++Q P + + N QYV Sbjct: 175 IYPFRMTEQNMHRHRNSTYASFWKQLQPGYAYFNQHNQPPAVTVFNGQYVVNPP 228 >gi|324111217|gb|EGC05200.1| ykud domain-containing protein [Escherichia fergusonii B253] gi|325496147|gb|EGC94006.1| hypothetical protein ECD227_0244 [Escherichia fergusonii ECD227] Length = 246 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 90/234 (38%), Positives = 133/234 (56%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L+ A+ + S + P+S+ + K+ P I+IFK E Sbjct: 1 MRKIALILAMLLIPCVSFASLLGSSSSTTPVSK------EYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +I Sbjct: 55 LDLYVK-MGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ Sbjct: 114 NIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 173 IYPFRMTDANMQRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|300024683|ref|YP_003757294.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526504|gb|ADJ24973.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 295 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 2/208 (0%) Query: 29 AEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88 P + ++ P ++RIFK E LE+W + D + Y IC WSG Sbjct: 73 PGQPDLARFSERLAEQGLKEGAPVLVRIFKREFELELWMQ-RDGAFRRFATYPICRWSGW 131 Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA 148 GPK+ GD QAPEGFY + + LNPNS++F S N+G+PN FD+A RTG+ +M+HG C Sbjct: 132 LGPKLVEGDRQAPEGFYTVEASALNPNSRWFRSFNLGYPNAFDRAQGRTGSLIMVHGGCG 191 Query: 149 SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNML 208 S GC+AM N QM EI+ +V +L G Q Q+Q +PFRM+ ++ + +P+ +FW L Sbjct: 192 SIGCFAMTNGQMAEIWRLVTAAL-GGGQKRFQVQVYPFRMSEAELKAHAKDPDIAFWRDL 250 Query: 209 KLGHDYFEKNHQEPFIQIINKQYVFFKG 236 K GHD FE N P + + +Y F G Sbjct: 251 KAGHDLFEANAVPPTVSVCKGRYQFQAG 278 >gi|315499814|ref|YP_004088617.1| hypothetical protein Astex_2828 [Asticcacaulis excentricus CB 48] gi|315417826|gb|ADU14466.1| hypothetical protein Astex_2828 [Asticcacaulis excentricus CB 48] Length = 240 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 130/199 (65%), Gaps = 2/199 (1%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 + ++ + P +IRIFK + LE+W ++ +Y L K ++IC+WSG+ GPK + G Sbjct: 44 IRAALTRNDLQLGQPILIRIFKETDELELWVKS-GGKYRLYKTFRICSWSGSLGPKKKEG 102 Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMN 156 D Q+PEGFY + + P+S+Y L+ N+G+PN FD+A+ R G+ LM+HG+CAS GCYAM Sbjct: 103 DGQSPEGFYTVSRGQMKPDSQYHLAFNLGYPNAFDRANGRIGSYLMVHGKCASIGCYAMT 162 Query: 157 NKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFE 216 +K ++EI+ I ++L+G Q+ Q+ +PFRMT +++ + +P FW LK G+D FE Sbjct: 163 DKGIEEIWLIADEALKG-GQTAFQVHVYPFRMTDAHIKRHVGSPWLGFWTDLKAGYDRFE 221 Query: 217 KNHQEPFIQIINKQYVFFK 235 +NH + + ++NK+Y Sbjct: 222 QNHSDLNVTVVNKRYRVTP 240 >gi|291616432|ref|YP_003519174.1| YafK [Pantoea ananatis LMG 20103] gi|291151462|gb|ADD76046.1| YafK [Pantoea ananatis LMG 20103] gi|327392872|dbj|BAK10294.1| lipoprotein YafK [Pantoea ananatis AJ13355] Length = 266 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 90/234 (38%), Positives = 132/234 (56%), Gaps = 8/234 (3%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ I L + + P+ + +S + K+ P I+IFK E LE+ Sbjct: 24 IALLFAM-ILLPALSMAMTP-----EPVQQLAPVSKELKKQLIGTPVYIQIFKEERTLEL 77 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + EY LL Y+IC +SG GPK GD ++PEGFY + N L P+S+++ +INIG Sbjct: 78 Y-GKIGNEYRLLDTYRICNFSGGLGPKRREGDFKSPEGFYSVKMNQLKPDSRFYRAINIG 136 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++D+ +G LMIHG+C S GCYAM N M +I+ V +LR N Q + I +P Sbjct: 137 FPNQYDRDQGYSGNYLMIHGDCKSIGCYAMTNAYMDQIFTYVNAALR-NGQQEVNIAIYP 195 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 FRMT NMQ ++ + FW L+ G+ YF + HQ P + + + +YV I Sbjct: 196 FRMTESNMQRHRYSTYADFWKQLQPGYAYFAQYHQPPTVNVASGRYVMNSSPVI 249 >gi|157147183|ref|YP_001454502.1| hypothetical protein CKO_02961 [Citrobacter koseri ATCC BAA-895] gi|157084388|gb|ABV14066.1| hypothetical protein CKO_02961 [Citrobacter koseri ATCC BAA-895] Length = 246 Score = 281 bits (718), Expect = 8e-74, Method: Composition-based stats. Identities = 88/236 (37%), Positives = 130/236 (55%), Gaps = 10/236 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L + L C L+ + +S + K+ P I+IFK E Sbjct: 1 MRKIAFFL----AMLLIPCVSFAGLLSSSSP----TTPVSKEYKQQLMGSPVYIQIFKEE 52 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ Sbjct: 53 RTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRFYK 111 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L QS +Q Sbjct: 112 AINIGFPNAYDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGALV-FGQSSVQ 170 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + +PFRMT NMQ ++ + FW LK G+DYFE+ + P + +++ +YV K Sbjct: 171 VSIYPFRMTDANMQRHKYSYYKDFWTQLKPGYDYFEQTRKPPTVSVVDGRYVVSKP 226 >gi|312112882|ref|YP_004010478.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC 17100] gi|311218011|gb|ADP69379.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC 17100] Length = 288 Score = 281 bits (718), Expect = 9e-74, Method: Composition-based stats. Identities = 92/228 (40%), Positives = 121/228 (53%), Gaps = 7/228 (3%) Query: 14 IFLNGCHHSRSLIDKAEHPLSE-----NLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 I L R L K PL L + +K P IRIFK E LE+W R Sbjct: 42 IRLAAHDAQRVLYAKLGWPLPGTPDLGRLNERLAEKGLERGAPVFIRIFKRERELELWMR 101 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 D+ +VL Y +C SG GPK+ GD QAPEGFY +G + LNPNS Y S N+G+PN Sbjct: 102 GGDS-FVLFASYPVCRHSGGLGPKLREGDRQAPEGFYTVGRSQLNPNSAYRRSFNLGYPN 160 Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188 +D A+ RTG+ LM+HG C S GCYAM + + EI+ +V +L Q FPFRM Sbjct: 161 LYDAANGRTGSFLMVHGACLSVGCYAMTDPVIDEIWELVTAALD-RGQKRFSAHVFPFRM 219 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + ++ ++ P FW LK G+D FE + P I + K+YV G Sbjct: 220 SEAHLAIHDRAPWGEFWRDLKRGYDLFEASRTPPRIGVCAKRYVARSG 267 >gi|313646642|gb|EFS11101.1| hypothetical protein SF2457T_4830 [Shigella flexneri 2a str. 2457T] Length = 237 Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats. Identities = 88/223 (39%), Positives = 129/223 (57%), Gaps = 6/223 (2%) Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73 + L C L+ + S +S + K+ P I+IFK E L+++ + + + Sbjct: 1 MLLIPCVSFAGLLGSS----SSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MGEQ 55 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133 Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+Y+ +INIGFPN +D+A Sbjct: 56 YQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRA 115 Query: 134 HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM 193 H G LMIHG+C S GCYAM N+ + EI+ V +L Q +Q+ +PFRMT NM Sbjct: 116 HGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALV-FGQPSVQVSIYPFRMTDANM 174 Query: 194 QLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + ++ + FW LK G+DYFE+ + P + + N +YV K Sbjct: 175 KRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVANGRYVVSKP 217 >gi|251788530|ref|YP_003003251.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591] gi|247537151|gb|ACT05772.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591] Length = 241 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 9/229 (3%) Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRN 69 A+ L + S + PLS ++ + K+ P I+IFK E +LE++ Sbjct: 8 LAMLFILPSVAINSSYAN----PLSP---VATETKQQVTGSPVYIQIFKEERVLELYAM- 59 Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE 129 + EY L++ Y IC +SG GPK+ GD ++PEGFY + L P+S Y+ +IN+GFPNE Sbjct: 60 IGGEYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLRQLKPDSHYYRAINVGFPNE 119 Query: 130 FDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMT 189 +D+AH +G LMIHGEC S GCYAM NK ++EIY V +LR N Q +++ +PFRMT Sbjct: 120 YDRAHGYSGRYLMIHGECVSIGCYAMTNKYIEEIYTYVEKALR-NGQQKVELAIYPFRMT 178 Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 +NM+ + + Y FW+ L+ G+ YF + HQ P + ++N QYV + Sbjct: 179 EQNMKRHSRSNYYKFWSQLQPGYAYFNRTHQPPAVSVLNGQYVVNQSSP 227 >gi|295096900|emb|CBK85990.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 246 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 89/234 (38%), Positives = 127/234 (54%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L A+ + S +S + K+ P I+IFK E Sbjct: 1 MRKIALFIAMLLI------PCMSFAGLLGSNSSTTPVSKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +I Sbjct: 55 LDLFVK-MGETYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYNVQRNQLKPDSRFYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN FD+AH G LMIHG C S GCYAM + + EI+ V +L Q ++Q+ Sbjct: 114 NIGFPNAFDRAHGYEGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTGALV-FGQPNVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NM ++ + FW LK G+DYFE+ H+ P + I+N +YV K Sbjct: 173 IYPFRMTDANMARHKYSVYTDFWKQLKPGYDYFEQTHKPPVVSIVNGRYVVSKP 226 >gi|261822679|ref|YP_003260785.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163] gi|261606692|gb|ACX89178.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163] Length = 244 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 95/234 (40%), Positives = 134/234 (57%), Gaps = 6/234 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + L FA+ FL + + + + I+ + K+ P I+IFK E I Sbjct: 1 MQKIALSFAMLFFLPSLVVTSAASETS----PPLAPIAKELKQQLLGSPIYIQIFKEERI 56 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 E++ + V EY LL++Y IC +SG GPK GD ++PEGFY + L P+S Y+ +I Sbjct: 57 FELYAK-VGNEYRLLEQYPICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSHYYRAI 115 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN++DK+ +G LMIHGEC S GCYAM N M IY +LR N Q+ I I Sbjct: 116 NIGFPNDYDKSQGYSGRYLMIHGECVSVGCYAMTNNYMDVIYRYAEAALR-NGQAKIDIA 174 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT +NMQ ++N+ SFW L+ G+ YF +++Q P I + N QYV Sbjct: 175 IYPFRMTEQNMQRHRNSTYASFWKQLQPGYAYFNQHNQPPAITVFNGQYVVNPP 228 >gi|146310424|ref|YP_001175498.1| hypothetical protein Ent638_0761 [Enterobacter sp. 638] gi|145317300|gb|ABP59447.1| protein of unknown function DUF949 [Enterobacter sp. 638] Length = 246 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 90/234 (38%), Positives = 131/234 (55%), Gaps = 8/234 (3%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R L A+ L C L+ S IS + K+ P I+IFK E Sbjct: 1 MRKIALFIAML--LIPCLSFAGLLSSN----SSTTPISKEYKQQLMGSPVYIQIFKEERT 54 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L+++ + + Y LL YKIC++SG GPK GD ++PEGFY + N L P+S+++ +I Sbjct: 55 LDLFVK-MGETYQLLDSYKICSYSGGLGPKQRQGDFKSPEGFYTVQRNQLKPDSRFYKAI 113 Query: 123 NIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 NIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L Q+ +Q+ Sbjct: 114 NIGFPNAYDRAHGYDGKYLMIHGACVSIGCYAMTDGGIDEIFQFVTGALV-FGQAGVQVS 172 Query: 183 AFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + + + +Y+ K Sbjct: 173 IYPFRMTDANMQRHKFSTYSEFWKQLKPGYDYFEQTHKPPTVSVADGRYIVSKP 226 >gi|237730216|ref|ZP_04560697.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226905755|gb|EEH91673.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 246 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 88/236 (37%), Positives = 129/236 (54%), Gaps = 10/236 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L + L C L+ + +S + K+ P I+IFK E Sbjct: 1 MRKIAFFL----AMLLLPCVSFAGLLSSSSP----TTPVSKEYKQQLMGSPVYIQIFKEE 52 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + L P+S+++ Sbjct: 53 RTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKQRQGDFKSPEGFYSVQRGQLKPDSRFYK 111 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L QS +Q Sbjct: 112 AINIGFPNAYDRAHGYEGKYLMIHGACVSVGCYAMTDNGIDEIFQFVTGALV-FGQSSVQ 170 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + +PFRMT NMQ ++ + FW LK G+DYFE+ + P + ++N +YV K Sbjct: 171 VSIYPFRMTDANMQRHKFSYYKDFWAQLKPGYDYFEQTRKPPTVSVVNGRYVVSKP 226 >gi|242238374|ref|YP_002986555.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703] gi|242130431|gb|ACS84733.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703] Length = 249 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 89/227 (39%), Positives = 132/227 (58%), Gaps = 2/227 (0%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67 L A+ FL + A + Q ++++ P I+IFK E +LE++ Sbjct: 6 LSLAMLFFLPSVAINSHAAQTAPVTTNTTQQPLQQPQQSAIGSPVYIQIFKEERVLELYS 65 Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127 ++ +Y L++ Y IC +SG GPK GD ++PEGFY + L P+S+Y+ +IN+GFP Sbjct: 66 KS-GNDYRLVQSYPICKFSGGLGPKKTEGDFKSPEGFYQVDLRQLKPDSRYYRAINVGFP 124 Query: 128 NEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187 NE+D+A +G LMIHGEC S GCYAM NK + EIY V +LR N Q + I +PFR Sbjct: 125 NEYDRAQGYSGRYLMIHGECVSIGCYAMTNKSIDEIYTYVEKALR-NGQQKVDIAIYPFR 183 Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 MT +NM+ + + +Y FW+ L+ G+ +F HQ P + + N QYV Sbjct: 184 MTEQNMKRHSRSVDYKFWSQLQPGYAFFNLTHQPPAVSVANGQYVIN 230 >gi|16759307|ref|NP_454924.1| hypothetical protein STY0357 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763695|ref|NP_459310.1| periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142920|ref|NP_806262.1| hypothetical protein t2538 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414560|ref|YP_151635.1| hypothetical protein SPA2443 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161615518|ref|YP_001589483.1| hypothetical protein SPAB_03290 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553102|ref|ZP_02346852.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993330|ref|ZP_02574425.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232267|ref|ZP_02657325.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238582|ref|ZP_02663640.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240051|ref|ZP_02664983.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261273|ref|ZP_02683246.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168465386|ref|ZP_02699268.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819097|ref|ZP_02831097.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445276|ref|YP_002039554.1| hypothetical protein SNSL254_A0351 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451114|ref|YP_002044296.1| hypothetical protein SeHA_C0353 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469639|ref|ZP_03075623.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738370|ref|YP_002113338.1| hypothetical protein SeSA_A0361 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251197|ref|YP_002145294.1| hypothetical protein SeAg_B0346 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264992|ref|ZP_03165066.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197363490|ref|YP_002143127.1| hypothetical protein SSPA2281 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198244473|ref|YP_002214267.1| hypothetical protein SeD_A0342 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389854|ref|ZP_03216465.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204926845|ref|ZP_03218047.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205351636|ref|YP_002225437.1| hypothetical protein SG0323 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207855797|ref|YP_002242448.1| hypothetical protein SEN0295 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213162132|ref|ZP_03347842.1| hypothetical protein Salmoneentericaenterica_19903 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425139|ref|ZP_03357889.1| hypothetical protein SentesTyphi_05232 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580522|ref|ZP_03362348.1| hypothetical protein SentesTyph_04605 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213649645|ref|ZP_03379698.1| hypothetical protein SentesTy_21510 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852431|ref|ZP_03381963.1| hypothetical protein SentesT_05809 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238913298|ref|ZP_04657135.1| hypothetical protein SentesTe_19534 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|25359104|pir||AF0542 probable exported protein STY0357 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418814|gb|AAL19269.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501598|emb|CAD08782.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138552|gb|AAO70122.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128817|gb|AAV78323.1| putative exported protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161364882|gb|ABX68650.1| hypothetical protein SPAB_03290 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403939|gb|ACF64161.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409418|gb|ACF69637.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456003|gb|EDX44842.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713872|gb|ACF93093.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195631687|gb|EDX50207.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094967|emb|CAR60504.1| putative exported protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214900|gb|ACH52297.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243247|gb|EDY25867.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288566|gb|EDY27943.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938989|gb|ACH76322.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602299|gb|EDZ00845.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323510|gb|EDZ08705.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271417|emb|CAR36225.1| putative exported protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322377|gb|EDZ10216.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328600|gb|EDZ15364.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333436|gb|EDZ20200.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339945|gb|EDZ26709.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344088|gb|EDZ30852.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205349892|gb|EDZ36523.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206707600|emb|CAR31882.1| putative exported protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261245538|emb|CBG23332.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992006|gb|ACY86891.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156928|emb|CBW16409.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911281|dbj|BAJ35255.1| hypothetical protein STMDT12_C03120 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084567|emb|CBY94359.1| Uncharacterized protein yafK Flags: Precursor [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224973|gb|EFX50034.1| putative exported protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322614605|gb|EFY11534.1| hypothetical protein SEEM315_18260 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620124|gb|EFY16996.1| hypothetical protein SEEM971_15976 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623418|gb|EFY20257.1| hypothetical protein SEEM973_06381 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629284|gb|EFY26063.1| hypothetical protein SEEM974_10053 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632004|gb|EFY28758.1| hypothetical protein SEEM201_09219 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637258|gb|EFY33960.1| hypothetical protein SEEM202_19419 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642455|gb|EFY39057.1| hypothetical protein SEEM954_06651 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646291|gb|EFY42805.1| hypothetical protein SEEM054_13439 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652440|gb|EFY48794.1| hypothetical protein SEEM675_07516 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653398|gb|EFY49731.1| hypothetical protein SEEM965_19094 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660454|gb|EFY56690.1| hypothetical protein SEEM19N_20333 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664606|gb|EFY60799.1| hypothetical protein SEEM801_06827 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669341|gb|EFY65491.1| hypothetical protein SEEM507_01020 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670887|gb|EFY67020.1| hypothetical protein SEEM877_06777 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678874|gb|EFY74929.1| hypothetical protein SEEM867_12580 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681903|gb|EFY77928.1| hypothetical protein SEEM180_16648 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322688029|gb|EFY83995.1| hypothetical protein SEEM600_10966 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323128630|gb|ADX16060.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194384|gb|EFZ79579.1| hypothetical protein SEEM581_21779 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197799|gb|EFZ82931.1| hypothetical protein SEEM501_21865 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203405|gb|EFZ88430.1| hypothetical protein SEEM460_07235 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206850|gb|EFZ91803.1| hypothetical protein SEEM020_02859 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210381|gb|EFZ95273.1| hypothetical protein SEEM6152_05557 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214623|gb|EFZ99374.1| hypothetical protein SEEM0077_18315 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223179|gb|EGA07522.1| hypothetical protein SEEM0047_02263 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224850|gb|EGA09113.1| hypothetical protein SEEM0055_09708 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230054|gb|EGA14174.1| hypothetical protein SEEM0052_01612 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233792|gb|EGA17881.1| hypothetical protein SEEM3312_07268 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238514|gb|EGA22572.1| hypothetical protein SEEM5258_09642 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244202|gb|EGA28211.1| hypothetical protein SEEM1156_09570 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246362|gb|EGA30345.1| hypothetical protein SEEM9199_11783 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251988|gb|EGA35851.1| hypothetical protein SEEM8282_14497 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257985|gb|EGA41664.1| hypothetical protein SEEM8283_03816 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259918|gb|EGA43549.1| hypothetical protein SEEM8284_22115 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265068|gb|EGA48567.1| hypothetical protein SEEM8285_20274 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272631|gb|EGA56038.1| hypothetical protein SEEM8287_15049 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622011|gb|EGE28356.1| Putative L,D-transpeptidase YafK [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326626667|gb|EGE33010.1| Putative exported protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987261|gb|AEF06244.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 246 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 130/236 (55%), Gaps = 10/236 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L + L C L+ + +S + K+ P I+IFK E Sbjct: 1 MRKIAFFL----AMLLMPCVSFAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEE 52 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ Sbjct: 53 RTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYK 111 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q Sbjct: 112 AINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALV-FGQPSVQ 170 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K Sbjct: 171 VSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSKP 226 >gi|271501763|ref|YP_003334789.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586] gi|270345318|gb|ACZ78083.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586] Length = 241 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 9/230 (3%) Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRN 69 A+ L S S ++ ++ + K+ P I+IFK E +LE++ Sbjct: 8 LAMLFILPSVAISNSYANQVSP-------VATETKQQVAGSPVYIQIFKEERVLELYAM- 59 Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE 129 + EY L++ Y IC +SG GPK+ GD ++PEGFY + L P+S Y+ +IN+GFPNE Sbjct: 60 IGGEYKLVQSYPICKYSGGLGPKMTEGDFKSPEGFYQVDLKQLKPDSHYYRAINVGFPNE 119 Query: 130 FDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMT 189 +D+AH +G LMIHGEC S GCYAM NK ++EIY V +LR N Q +++ +PFRMT Sbjct: 120 YDRAHGYSGRYLMIHGECVSIGCYAMTNKYIEEIYTYVEKALR-NGQQKVELAIYPFRMT 178 Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 +NM+ + + Y FW+ L+ G+ YF + HQ P + ++N QYV + + Sbjct: 179 EQNMKRHSRSNYYKFWSQLQPGYAYFNRMHQPPAVSVLNGQYVVNQSAPV 228 >gi|238793948|ref|ZP_04637567.1| hypothetical protein yinte0001_28550 [Yersinia intermedia ATCC 29909] gi|238726715|gb|EEQ18250.1| hypothetical protein yinte0001_28550 [Yersinia intermedia ATCC 29909] Length = 235 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 89/217 (41%), Positives = 130/217 (59%), Gaps = 6/217 (2%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80 + S A P++ +S + K+ I+IFK E LE++ R + EY L++ Y Sbjct: 4 PAVSFTSSASEPVA----VSKELKQQLLGSSVYIQIFKEERTLELYAR-LQGEYRLVQSY 58 Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGAD 140 +IC +SG GPK GD ++PEGFY I +L P+SK++ +INIGFPN++DK+ +G Sbjct: 59 RICEFSGGLGPKRREGDFKSPEGFYSIDMRHLKPDSKFYRAINIGFPNDYDKSQGYSGKY 118 Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNP 200 LMIHG C S GCYAM + M EI+ V+ + Q + I +PFRMT +NMQ ++N+ Sbjct: 119 LMIHGACKSIGCYAMTDAYMDEIFNYVQTAF-IFGQEKVDISIYPFRMTEQNMQRHRNSS 177 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 +YSFW L+ G+ YF KN P + +IN QYV + Sbjct: 178 DYSFWRQLQPGYAYFTKNRMPPSVAVINGQYVLSRPP 214 >gi|304395395|ref|ZP_07377278.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB] gi|304356689|gb|EFM21053.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB] Length = 248 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 93/232 (40%), Positives = 132/232 (56%), Gaps = 8/232 (3%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ I L + + P+ +S + K+ P I+IFK E LE+ Sbjct: 4 IALLFAM-ILLPALSMAMTP-----EPVQTAAPVSKELKKQLLGTPVYIQIFKEERTLEL 57 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + EY LL Y+IC +SG GPK GD ++PEGFY + N L P+S+++ +INIG Sbjct: 58 Y-GKIGNEYRLLDTYRICNFSGGLGPKRREGDFKSPEGFYNVKLNQLKPDSRFYRAINIG 116 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN+FD+ +G LMIHG+C S GCYAM N M EI+ V +LR N Q + I +P Sbjct: 117 FPNQFDRNQGYSGNYLMIHGDCKSIGCYAMTNAYMDEIFTYVNAALR-NGQQDVSISIYP 175 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FRMT NMQ ++ + + SFW L+ G+ YF K HQ P + + + +YV Sbjct: 176 FRMTDSNMQRHRYSSDASFWQQLQPGYAYFAKYHQPPTVNVASGKYVMNSSP 227 >gi|227329184|ref|ZP_03833208.1| hypothetical protein PcarcW_18350 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 231 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 2/216 (0%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80 S + A I+ + K+ P I+IFK E I E++ + V EY LL++Y Sbjct: 2 PSLVVTSAASETAPPLAPIAKELKQQLLGSPIYIQIFKEERIFELYAK-VGNEYRLLEQY 60 Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGAD 140 IC +SG GPK GD ++PEGFY + L P+S+Y+ +INIGFPN++DK+ +G Sbjct: 61 PICKYSGGLGPKRVEGDLKSPEGFYQVDLRQLKPDSQYYRAINIGFPNDYDKSQGYSGRY 120 Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNP 200 LMIHGEC S GCYAM N M EIY +LR N Q+ I I +PFRMT +NMQ ++N+ Sbjct: 121 LMIHGECVSVGCYAMTNTYMDEIYRYAEAALR-NGQAKIDIAIYPFRMTEQNMQRHRNST 179 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 SFW L+ G+ YF +++Q P + + N QYV Sbjct: 180 YASFWKQLQPGYAYFNQHNQPPAVTVFNGQYVVNPP 215 >gi|213622012|ref|ZP_03374795.1| hypothetical protein SentesTyp_32601 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 242 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 89/227 (39%), Positives = 130/227 (57%), Gaps = 6/227 (2%) Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRN 69 F L + L C L+ + +S + K+ P I+IFK E L+++ + Sbjct: 2 FFLAMLLMPCVSFAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK- 56 Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE 129 + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ +INIGFPN Sbjct: 57 MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYKAINIGFPNA 116 Query: 130 FDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMT 189 +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q+ +PFRMT Sbjct: 117 YDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALV-FGQPSVQVSIYPFRMT 175 Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K Sbjct: 176 DANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSKP 222 >gi|238918831|ref|YP_002932345.1| hypothetical protein NT01EI_0895 [Edwardsiella ictaluri 93-146] gi|238868398|gb|ACR68109.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 240 Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats. Identities = 88/238 (36%), Positives = 128/238 (53%), Gaps = 12/238 (5%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M IL L + L S S I + + I+IFK E Sbjct: 1 MGKIVAILAICLTLPLAASKSSASESG----------ITPLNDANSLLGSQVYIQIFKEE 50 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 LE++ + D +Y L+K + IC +SG GPK GD ++PEGFY I +L P+S+Y+ Sbjct: 51 RQLELYAKVQD-KYRLVKSFPICKFSGGLGPKRTEGDFKSPEGFYQIDARHLKPDSRYYQ 109 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIG+PN FD++H +G LMIHG+C S GCYAM N + EIY V+ + R Q+ + Sbjct: 110 AINIGYPNSFDQSHGYSGNYLMIHGDCVSIGCYAMTNDGISEIYRYVQSAFRS-GQTLVN 168 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 I +PFRMT +NMQL++N+ FW L+ G+ YF +N P + + + +YV Sbjct: 169 INIYPFRMTDRNMQLHRNSSYIGFWRQLQPGYQYFAQNALPPQVNVQDGRYVVSGALP 226 >gi|161504584|ref|YP_001571696.1| hypothetical protein SARI_02698 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865931|gb|ABX22554.1| hypothetical protein SARI_02698 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 246 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 89/236 (37%), Positives = 130/236 (55%), Gaps = 10/236 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L + L C L+ + +S + K+ P I+IFK E Sbjct: 1 MRKIAFFL----AMLLMPCVSLAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEE 52 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ Sbjct: 53 RTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYK 111 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q Sbjct: 112 AINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAAL-IFGQPSVQ 170 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K Sbjct: 171 VSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPIVSIVDGRYVVSKP 226 >gi|37525163|ref|NP_928507.1| hypothetical protein plu1195 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784589|emb|CAE13489.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 247 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 97/237 (40%), Positives = 126/237 (53%), Gaps = 8/237 (3%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M I L + + L+ Q P P I+IFK E Sbjct: 1 MKKIAAFPAIITIILLLFSSFTPVYTQ-------DTLVQLQQNFPVQPGSPVFIQIFKEE 53 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 ILE++ +N Y L K Y IC +SG GPK GD ++PEGFY + + LNPNS+Y+ Sbjct: 54 RILELYTKNSHGSYQLSKSYPICNYSGGLGPKTTEGDLKSPEGFYRVKTHQLNPNSRYYR 113 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 SIN+GFPNE+DK +G LMIHGEC S GCYAM N M EIY V +L Q I Sbjct: 114 SINLGFPNEYDKFRGYSGNYLMIHGECKSVGCYAMTNGYMDEIYHYVESALL-RGQYEIN 172 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 I +PFRMT +NM ++++ +Y FW L+ ++YF KNHQ + IIN QYV Sbjct: 173 ISIYPFRMTPQNMLRHRSSSHYMFWLQLQPAYEYFAKNHQPATVSIINGQYVVNATP 229 >gi|261346249|ref|ZP_05973893.1| putative membrane protein [Providencia rustigianii DSM 4541] gi|282565557|gb|EFB71092.1| putative membrane protein [Providencia rustigianii DSM 4541] Length = 245 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 122/209 (58%), Gaps = 1/209 (0%) Query: 29 AEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88 E LI ++ I+IFK E +LE++++ D ++ L+K Y IC +SG Sbjct: 19 VNAQNKETLINLNERANIEQKSSIFIQIFKQEGVLELYQKASDGKFKLVKTYPICKFSGG 78 Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA 148 GPK GD ++PEGFY I LNPNS+++ SIN+GFPN+FDKA TG LMIHG C Sbjct: 79 LGPKKIEGDLKSPEGFYQITAEQLNPNSQFYRSINLGFPNDFDKAQGYTGNYLMIHGSCV 138 Query: 149 SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNML 208 S GCYAM +K M EIY V +L+ N Q I + +PFRMT NM Y+N+ +Y+FW L Sbjct: 139 STGCYAMTDKSMGEIYQTVERALQ-NGQPIIDVNIYPFRMTKTNMLRYRNSSHYAFWKQL 197 Query: 209 KLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + +DYFE+ + +I +Y Sbjct: 198 QPAYDYFERTKTPAEVSVILGKYNVNSMP 226 >gi|300715465|ref|YP_003740268.1| hypothetical protein EbC_08790 [Erwinia billingiae Eb661] gi|299061301|emb|CAX58410.1| Putative exported protein [Erwinia billingiae Eb661] Length = 246 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 87/234 (37%), Positives = 132/234 (56%), Gaps = 7/234 (2%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ IFL + P+ +S + K+ P I+IFK E LE+ Sbjct: 4 IALLFAM-IFLPAVVFASVPTS----PVLPLAPVSKELKKQLLGTPVYIQIFKEERTLEL 58 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + +Y LL Y+IC +SG GPK GD ++PEGFY +G + L P+S+++ +IN+G Sbjct: 59 Y-GKIGNDYRLLDSYRICNFSGGLGPKRRQGDFKSPEGFYSVGLSQLKPDSRFYRAINVG 117 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPNE+D+ G LMIHG C S GCYAM + + +IY V +LR N Q +++ +P Sbjct: 118 FPNEYDRQQGYEGKYLMIHGSCVSIGCYAMTDANIADIYQFVDAALR-NGQPRVEVSIYP 176 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 FRMT N+Q ++N+ YSFW L+ G+ F +N P + + YV + ++ Sbjct: 177 FRMTDSNLQRHRNSVYYSFWKQLQPGYAQFVQNRLPPSVSVNEGHYVLNQPGSL 230 >gi|22124856|ref|NP_668279.1| hypothetical protein y0949 [Yersinia pestis KIM 10] gi|108811018|ref|YP_646785.1| hypothetical protein YPN_0853 [Yersinia pestis Nepal516] gi|229901240|ref|ZP_04516362.1| putative exported protein precursor [Yersinia pestis Nepal516] gi|270489430|ref|ZP_06206504.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|21957687|gb|AAM84530.1|AE013698_4 hypothetical protein y0949 [Yersinia pestis KIM 10] gi|108774666|gb|ABG17185.1| hypothetical protein YPN_0853 [Yersinia pestis Nepal516] gi|229681169|gb|EEO77263.1| putative exported protein precursor [Yersinia pestis Nepal516] gi|270337934|gb|EFA48711.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|320016430|gb|ADW00002.1| putative exported protein precursor [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 220 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 120/199 (60%), Gaps = 2/199 (1%) Query: 39 ISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98 +S + K+ I+IFK E +LE++ + + EY L++ Y IC +SG GPK GD Sbjct: 3 VSKELKQQLLGSSVYIQIFKEERVLELYAK-LQGEYRLVQSYPICEFSGGLGPKRREGDF 61 Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNK 158 ++PEGFY I +L P+S+++ +INIGFPN++DK+ +G LMIHG C S GCYAM + Sbjct: 62 KSPEGFYRINTRHLKPDSQFYRAINIGFPNDYDKSQGYSGKYLMIHGACKSIGCYAMTDA 121 Query: 159 QMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKN 218 M EI+ VR + Q + I +PFRMT +N+Q ++N+ +FW L+ G+ YF KN Sbjct: 122 YMDEIFNYVRTAF-IFGQEKVDISIYPFRMTEQNIQRHRNSSYSNFWRQLQPGYTYFAKN 180 Query: 219 HQEPFIQIINKQYVFFKGQ 237 P + + N QYV Sbjct: 181 RMPPPVSVSNGQYVLSPPP 199 >gi|308185804|ref|YP_003929935.1| hypothetical protein Pvag_0272 [Pantoea vagans C9-1] gi|308056314|gb|ADO08486.1| Uncharacterized protein yafK precursor [Pantoea vagans C9-1] Length = 247 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 91/232 (39%), Positives = 132/232 (56%), Gaps = 9/232 (3%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ I L + + + P+S+ L + P I+IFK E LE+ Sbjct: 4 IALLFAM-ILLPALSMAMTPEPVSAAPVSKELKKQL------LGTPVYIQIFKEERTLEL 56 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + E+ LL Y+IC +SG GPK GD ++PEGFY + N L P+S+++ +INIG Sbjct: 57 Y-GKIGNEFRLLDTYRICNFSGGLGPKRREGDFKSPEGFYNVKLNQLKPDSRFYRAINIG 115 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++D+ +G LMIHG+C S GCYAM N M EI+ V +LR N Q + I +P Sbjct: 116 FPNQYDRNQGYSGNYLMIHGDCKSIGCYAMTNAYMDEIFTYVNAALR-NGQQDVGISIYP 174 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 FRMT NMQ ++ + + SFW L+ G+ YF K HQ P + + + +YV Sbjct: 175 FRMTDSNMQRHRYSSDASFWQQLQPGYAYFAKYHQPPMVNVASGKYVMNSSP 226 >gi|218780861|ref|YP_002432179.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans AK-01] gi|218762245|gb|ACL04711.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans AK-01] Length = 239 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 3/216 (1%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80 S + + ++ +L + + P +RIFK E LE+W + K Y Sbjct: 25 PSSARSKEVIARIAPDLKKEFSQAGLTWGAPVFMRIFKKEKRLEVWVLK-GKRFQHFKSY 83 Query: 81 KI-CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139 KI GPK+E GD +APEGFY++ +NP+S+Y L+ NIG+PN++D+ H RTG Sbjct: 84 KIFTYGLRGLGPKLEEGDWRAPEGFYFVPPKMMNPSSRYHLAFNIGYPNKYDRRHGRTGG 143 Query: 140 DLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNN 199 +M+HG C S GCYAM +K+++EIY I +LR N Q ++ FPF MT KNM+ YQ++ Sbjct: 144 LIMVHGSCVSVGCYAMRDKRIEEIYTIADAALR-NGQPFFRVHIFPFEMTEKNMKKYQDD 202 Query: 200 PNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + FW LK G+D FEKN P + + +YVF Sbjct: 203 DWFEFWRNLKQGYDLFEKNKTPPDADVKDGKYVFSP 238 >gi|292487367|ref|YP_003530239.1| hypothetical protein EAMY_0881 [Erwinia amylovora CFBP1430] gi|292898612|ref|YP_003537981.1| exported protein [Erwinia amylovora ATCC 49946] gi|291198460|emb|CBJ45568.1| putative exported protein [Erwinia amylovora ATCC 49946] gi|291552786|emb|CBA19831.1| Uncharacterized protein yafK precursor [Erwinia amylovora CFBP1430] gi|312171472|emb|CBX79730.1| Uncharacterized protein yafK precursor [Erwinia amylovora ATCC BAA-2158] Length = 244 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 86/231 (37%), Positives = 129/231 (55%), Gaps = 8/231 (3%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ IFL + ++ +S + ++ P ++IFK E LE+ Sbjct: 4 IALLFAM-IFLPAVVFAS-----VNETITPLAPVSKELRKQLIGIPVYLQIFKEERTLEL 57 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + EY LL + IC +SG GPK GD ++PEGFY + + L P+S+Y+ +IN+G Sbjct: 58 Y-GKIGNEYRLLNSFPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRYYRAINVG 116 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPNE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +P Sbjct: 117 FPNEYDRQQGYQGKYLMIHGNCVSIGCYAMTDAYMDEIYRYVEAALR-NGQPRIEVSIYP 175 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 FRMT+ NMQ ++ + +FW L+ G+ FE+ Q P + + +YV + Sbjct: 176 FRMTASNMQRHRYSTYINFWKQLQPGYAQFEQTKQPPAVAVSAGKYVLSRP 226 >gi|317047049|ref|YP_004114697.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b] gi|316948666|gb|ADU68141.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b] Length = 248 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 92/240 (38%), Positives = 125/240 (52%), Gaps = 11/240 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L + L+ P++ +S + K+ P I+IFK E Sbjct: 1 MGRIALFLAMIVMPVLSWAMTP--------EPVNPQAPVSKELKKQLLGTPVYIQIFKEE 52 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 LE++ + EY LL Y+IC +SG GPK GD ++PEGFY + N L P+S Y+ Sbjct: 53 RTLELY-GKIGNEYRLLDSYRICNFSGGLGPKRREGDFKSPEGFYSVKLNQLKPDSHYYR 111 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +IN GFPN+FD+ + G LMIHG+C S GCYAM N M EIY V +LR N Q I Sbjct: 112 AINTGFPNQFDRDNGYNGKYLMIHGDCKSIGCYAMTNAYMDEIYTYVNAALR-NGQQEIA 170 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIIN-KQYVFFKGQTI 239 + FPFRMT NMQ ++ + SFW L+ G+ YFEK Q P + + QY + Sbjct: 171 LSIFPFRMTDSNMQRHRYSTYASFWRQLQPGYAYFEKYRQPPTVNVTATGQYAVNSSPAV 230 >gi|310766742|gb|ADP11692.1| hypothetical protein EJP617_20110 [Erwinia sp. Ejp617] Length = 244 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 87/232 (37%), Positives = 128/232 (55%), Gaps = 7/232 (3%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 I L IFL + + A PL+ +S + ++ P ++IFK E LE++ Sbjct: 4 IALLIAMIFLPAVVFAS--VPDAVTPLAP---VSKELRKQLIGVPVYLQIFKEERTLELY 58 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 + EY LL Y IC +SG GPK GD ++PEGFY + + L P+S+++ +IN+GF Sbjct: 59 -GKIGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRFYRAINVGF 117 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PNE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +PF Sbjct: 118 PNEYDRQQGYQGKYLMIHGSCVSIGCYAMTDAYMDEIYHYVEAALR-NGQPRIEVSIYPF 176 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 RMT NMQ ++ + +FW L+ G+ F + Q P + + +YV + T Sbjct: 177 RMTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAVAVSAGKYVLSRPLT 228 >gi|188534726|ref|YP_001908523.1| hypothetical protein ETA_26010 [Erwinia tasmaniensis Et1/99] gi|188029768|emb|CAO97647.1| Putative exported protein [Erwinia tasmaniensis Et1/99] Length = 244 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 87/233 (37%), Positives = 124/233 (53%), Gaps = 8/233 (3%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ S + P+S+ L + P ++IFK E LE+ Sbjct: 4 IALLFAMIFLPAVVFASVTETATPLAPVSKELRKQL------IGVPVYLQIFKEERTLEL 57 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + EY LL Y IC +SG GPK GD ++PEGFY + + L PNS+++ +IN+G Sbjct: 58 Y-GKIGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYNVSLSQLKPNSRFYRAINVG 116 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPNE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I + +P Sbjct: 117 FPNEYDRQQGYQGNYLMIHGSCVSIGCYAMTDAYMDEIYHYVEAALR-NGQPRIDVSIYP 175 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 FRMT NMQ ++ + +FW L+ G+ F + Q P + + +YV + T Sbjct: 176 FRMTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAMAVNAGKYVLDRPLT 228 >gi|300024685|ref|YP_003757296.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299526506|gb|ADJ24975.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 318 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 2/207 (0%) Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90 P L ++ K + P +IRIFK E+ LEIWK+ Y+L Y IC WSGT G Sbjct: 42 TPNVAFLQARLRDKGVTLADPILIRIFKAESELEIWKQKGGG-YILFATYPICHWSGTLG 100 Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA 150 PK+ GD QAPEG+Y + + ++ S+++GFPN D++ RTG+ +++HG C+S Sbjct: 101 PKLRDGDRQAPEGYYTLSRSQTRHVGRWPRSLDLGFPNILDQSQARTGSSILVHGGCSSI 160 Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210 GC+AM N EI+ + ++ G + + + FPFRMT KN+ +P +FW LK Sbjct: 161 GCFAMTNPVSDEIHQMTLAAMDG-GEQIVPVHVFPFRMTDKNLAAQDASPWKAFWTNLKE 219 Query: 211 GHDYFEKNHQEPFIQIINKQYVFFKGQ 237 G+D FE+ + P I + + +Y+F + Q Sbjct: 220 GYDLFEQTKRPPIIGVCSGRYIFRETQ 246 >gi|269119360|ref|YP_003307537.1| ErfK/YbiS/YcfS/YnhG family protein [Sebaldella termitidis ATCC 33386] gi|268613238|gb|ACZ07606.1| ErfK/YbiS/YcfS/YnhG family protein [Sebaldella termitidis ATCC 33386] Length = 247 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 98/236 (41%), Positives = 142/236 (60%), Gaps = 10/236 (4%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKR---------TSPFHPTVIR 55 L F +FI ++ +ID+ E ++ + + + + +P IR Sbjct: 9 VLALFFLVFIGISNKISFEKVIDEGEEIINTISLGNKEYRNSGEKGGQENIKTGNPLYIR 68 Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 +FK E LE+W +N Y L K + IC +SG GPK + GD+++PEGFYY + LNPN Sbjct: 69 VFKEEKELEMWIKNDSGTYSLYKVFDICTFSGGLGPKKKEGDKKSPEGFYYTQKSFLNPN 128 Query: 116 SKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNM 175 S Y LS NIG+PNE+DK+H TG+ +MIHG+C S GCYAM +K ++EIY +V +L N Sbjct: 129 SAYHLSFNIGYPNEYDKSHGYTGSLIMIHGDCLSIGCYAMTDKYIEEIYGLVEKTLN-NG 187 Query: 176 QSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231 Q I + FPF+MT+ NM+ ++ + YSFW LK G+DYFEKN P + + NK+Y Sbjct: 188 QEKINVDVFPFKMTAANMKRHKKSEYYSFWEELKPGYDYFEKNKIPPRMTVENKKY 243 >gi|212709370|ref|ZP_03317498.1| hypothetical protein PROVALCAL_00406 [Providencia alcalifaciens DSM 30120] gi|212688282|gb|EEB47810.1| hypothetical protein PROVALCAL_00406 [Providencia alcalifaciens DSM 30120] Length = 245 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 91/225 (40%), Positives = 123/225 (54%), Gaps = 9/225 (4%) Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 + C + L K T P I+IFK E +LE++++ Sbjct: 11 LLITFACSS--------YAQKEDALFSLNNKPATQPDSSIFIQIFKQEGVLELYQKTAVG 62 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 +Y L+K Y IC +SG GPK GD ++PEGFY I + LNPNS+Y+ SIN+GFPNEFDK Sbjct: 63 KYKLVKTYPICKFSGGLGPKKMEGDLKSPEGFYQITHSQLNPNSRYYRSINLGFPNEFDK 122 Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192 +G LMIHG C S GCYAM +K M EIY IV +L+ N Q I + +PFRMT N Sbjct: 123 TQGYSGNYLMIHGSCVSVGCYAMTDKSMGEIYQIVEQALQ-NGQPAIDVSIYPFRMTKMN 181 Query: 193 MQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 M Y+N+ +Y+FW L+ +DYFE+ I + +Y Sbjct: 182 MLRYRNSAHYAFWKQLQPAYDYFERTGNPAEISVTLGKYHVNSMP 226 >gi|62178883|ref|YP_215300.1| hypothetical protein SC0313 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62126516|gb|AAX64219.1| putative periplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322713335|gb|EFZ04906.1| hypothetical protein SCA50_0331 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 207 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 2/188 (1%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 P I+IFK E L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + Sbjct: 2 GSPVYIQIFKEERTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQ 60 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVR 168 N L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V Sbjct: 61 RNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVT 120 Query: 169 DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIIN 228 +L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ Sbjct: 121 AALV-FGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVD 179 Query: 229 KQYVFFKG 236 +YV K Sbjct: 180 GRYVVSKP 187 >gi|183596299|ref|ZP_02958327.1| hypothetical protein PROSTU_00030 [Providencia stuartii ATCC 25827] gi|188023899|gb|EDU61939.1| hypothetical protein PROSTU_00030 [Providencia stuartii ATCC 25827] Length = 245 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 81/191 (42%), Positives = 118/191 (61%), Gaps = 1/191 (0%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 I+IFK E +LE++++ + +Y L K Y IC +SG GPK GD ++PEGFY Sbjct: 37 QQNSAIFIQIFKQEGVLELYQKAPNGKYNLSKTYPICKFSGGLGPKKREGDLKSPEGFYQ 96 Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAI 166 I + LNPNS+Y+ SIN+GFPNE+D+A G LMIHG+C S GCYAM +K M EIY Sbjct: 97 ITASQLNPNSRYYRSINLGFPNEYDRAQGYEGNYLMIHGDCVSVGCYAMTDKYMSEIYQT 156 Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQI 226 V + + Q+ I + +PFRMT +NM +++N+ +Y+FW LK +DYF+ + I + Sbjct: 157 VESAFKS-GQNTIDVSIYPFRMTKENMLIHRNSSHYAFWQQLKPAYDYFQDAGKPAQISV 215 Query: 227 INKQYVFFKGQ 237 + +Y Sbjct: 216 TSGKYAVNSLP 226 >gi|259909352|ref|YP_002649708.1| hypothetical protein EpC_27230 [Erwinia pyrifoliae Ep1/96] gi|224964974|emb|CAX56502.1| Putative exported protein [Erwinia pyrifoliae Ep1/96] gi|283479424|emb|CAY75340.1| Uncharacterized protein yafK precursor [Erwinia pyrifoliae DSM 12163] Length = 243 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 86/230 (37%), Positives = 127/230 (55%), Gaps = 7/230 (3%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 I L IFL + + A PL+ +S + ++ P ++IFK E LE++ Sbjct: 4 IALLIAMIFLPAVVFAS--VPDAVTPLAP---VSKELRKQLIGVPVYLQIFKEERTLELY 58 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 + EY LL Y IC +SG GPK GD ++PEGFY + + L P+S+++ +IN+GF Sbjct: 59 -GKIGNEYRLLNSYPICKFSGGLGPKRVQGDFKSPEGFYSVSLSQLKPDSRFYRAINVGF 117 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PNE+D+ G LMIHG C S GCYAM + M EIY V +LR N Q I++ +PF Sbjct: 118 PNEYDRQQGYQGKYLMIHGSCVSIGCYAMTDAYMDEIYHHVEAALR-NGQPRIEVSIYPF 176 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 RMT NMQ ++ + +FW L+ G+ F + Q P + + +YV + Sbjct: 177 RMTESNMQRHRYSTYINFWKQLQPGYAQFVQTKQPPAVAVSAGKYVLSRP 226 >gi|320540146|ref|ZP_08039801.1| putative conserved protein [Serratia symbiotica str. Tucson] gi|320029812|gb|EFW11836.1| putative conserved protein [Serratia symbiotica str. Tucson] Length = 253 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 92/237 (38%), Positives = 132/237 (55%), Gaps = 15/237 (6%) Query: 1 MTNRYN-ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M +F L C A L ++ Q P I+IFK Sbjct: 1 MGKIALWFAMFLAMPILTACS--------ANTQLPALPVVQQQL----VGAPVYIQIFKE 48 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E LE++ + + ++ L K ++IC++SG GPK + GD ++PEGFY I +L P+S+Y+ Sbjct: 49 ERTLELYTK-IGDQFRLAKSFRICSFSGGLGPKRQQGDFKSPEGFYSIDVRHLKPDSQYY 107 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHI 179 +INIGFPN++DKA +GA LMIHGEC S GCYAM N M EIY V + QS I Sbjct: 108 RAINIGFPNDYDKAQGYSGAYLMIHGECKSIGCYAMTNTAMGEIYRYVAAAF-AYGQSRI 166 Query: 180 QIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 I +PFRMT +N+Q ++++ +FW L+ G++YF KN Q P + + N QYV + Sbjct: 167 DISIYPFRMTKQNLQRHRSSSYIAFWRQLEPGYNYFVKNQQPPRMAVANGQYVLNRP 223 >gi|322831680|ref|YP_004211707.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602] gi|321166881|gb|ADW72580.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602] Length = 241 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 84/236 (35%), Positives = 136/236 (57%), Gaps = 11/236 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L L + L +++ + S+ + ++ K+ P I+IFK E Sbjct: 1 MIRIALFLAMLLSLPLFTANYAVA---------SDAVPVNAALKKQLLGAPVYIQIFKQE 51 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 LE++ + +D E+ L+ Y IC +SG G K GD ++PEGFY + ++L P+S+++ Sbjct: 52 RKLELYAQ-LDGEFRLIGSYGICDFSGGLGNKRREGDFKSPEGFYNVDIHHLKPDSRFYR 110 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D + +G LMIHG C S GCYAM + M EI+ V+ + + Q +++ Sbjct: 111 AINIGFPNAYDISQGYSGKYLMIHGNCKSIGCYAMTDGYMDEIFTYVQAAFQ-FGQRNLK 169 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 I +PFRMT NM+ ++N+ YSFWN L+ G+ YFEK+HQ P + + + +Y + Sbjct: 170 ISIYPFRMTDANMKAHKNSSYYSFWNQLQPGYAYFEKHHQPPNVVVTDGRYEVLQP 225 >gi|329296658|ref|ZP_08253994.1| ErfK/YbiS/YcfS/YnhG family protein [Plautia stali symbiont] Length = 247 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 90/235 (38%), Positives = 125/235 (53%), Gaps = 9/235 (3%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LLFA+ + P+ +S + K+ P I+IFK E LE+ Sbjct: 4 IALLFAMILM------PLLSWAMTPEPMQPLAPVSKELKKQLLGTPVFIQIFKEERTLEL 57 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 + + EY LL Y+IC SG GPK GD ++PEGFY + N L P+S+++ +IN G Sbjct: 58 Y-GKIGNEYRLLDSYRICNISGGLGPKRRQGDFKSPEGFYNVKMNQLKPDSRFYRAINTG 116 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 FPN++D+A G LMIHG+C S GCYAM N M EI+ V +LR N Q +Q+ FP Sbjct: 117 FPNQYDRAKGYNGNYLMIHGDCVSVGCYAMTNASMDEIFTYVNAALR-NGQQDVQVNIFP 175 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIIN-KQYVFFKGQTI 239 FRMT NMQ ++ + SFW L+ G+ YF K H P + + QY + Sbjct: 176 FRMTDSNMQRHRYSTYISFWRELQPGYAYFAKYHVPPTVNVTATGQYAVNNTPVM 230 >gi|296446177|ref|ZP_06888125.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium OB3b] gi|296256371|gb|EFH03450.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium OB3b] Length = 387 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 111/215 (51%), Gaps = 15/215 (6%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 S + + +RIFK E LE+W + D Y L K Y IC WSG GPK+ Sbjct: 165 SPGPLQRREDGNFRLGAAAYVRIFKKEGELELWLK-RDGRYSLYKTYPICKWSGRLGPKL 223 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCY 153 +GD Q+PEGFY + L+P+S Y + NIGFPN +D+ + RTG LM+HG C S GC+ Sbjct: 224 RSGDYQSPEGFYSVSARQLHPSSAYHRAFNIGFPNAYDRQNGRTGGALMVHGACKSVGCF 283 Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY-------------QNNP 200 AM +K ++EIY +V +LR Q + + FPFRMT + + + Sbjct: 284 AMTDKVIEEIYGVVEAALRA-GQHEVPVHIFPFRMTEEALAKETRGDWSTFWAVPPEYQQ 342 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 +FW LK G+D FE+ + P +Y F Sbjct: 343 WTAFWQNLKEGYDLFERTGEPPTAYACGARYGFAA 377 >gi|187735088|ref|YP_001877200.1| protein of unknown function DUF949 [Akkermansia muciniphila ATCC BAA-835] gi|187425140|gb|ACD04419.1| protein of unknown function DUF949 [Akkermansia muciniphila ATCC BAA-835] Length = 244 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 3/223 (1%) Query: 13 FIFLNGCHH-SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR-NV 70 +F C S + D A ++ L ++ P +R K +++LE+W + + Sbjct: 20 AVFNMACAEKSSNRADIARKRVTPVLNSFLEPCGARVGSPVFLRAVKEDSVLELWVKPDK 79 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130 Y+L K Y I AWSG GPK + GD Q PEGFY + + LNP S Y LS NIG+PN + Sbjct: 80 SECYMLAKRYPIAAWSGKLGPKEKEGDRQTPEGFYEVEPSGLNPRSNYHLSFNIGYPNAY 139 Query: 131 DKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190 D++ NRTG+ +M+HG S GC AM + ++EIY +V +L + Q ++ +Q +PF T Sbjct: 140 DRSLNRTGSFIMVHGRDVSIGCLAMTDSGIEEIYTMVEQALV-HGQKNVPVQIYPFVPTP 198 Query: 191 KNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 + +++P+ +FW + D+ E+ ++ +N + V Sbjct: 199 ARLSEEKDSPHAAFWADMARAWDWTERTRTPARVKAVNGRLVV 241 >gi|197284252|ref|YP_002150124.1| hypothetical protein PMI0351 [Proteus mirabilis HI4320] gi|194681739|emb|CAR40910.1| putative exported protein [Proteus mirabilis HI4320] Length = 250 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 81/228 (35%), Positives = 126/228 (55%), Gaps = 12/228 (5%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +++F I + ++ + P+ ++ P I+IFK EN+LE++ Sbjct: 8 LIIFLTIILTSLFVNAENSSKFLIKPVKKST-----------GEPIYIQIFKEENLLELY 56 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 D + ++ Y IC++SG GPK GD ++PEGFY + LNPNS+++ +IN+GF Sbjct: 57 IEKQDGQLEKIRTYPICSYSGGLGPKKYQGDLKSPEGFYQVNQTQLNPNSRFYRAINLGF 116 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN++D+ TG LMIHG C S GCYAM + M EIY +L+ N Q I I FPF Sbjct: 117 PNQYDQEQGYTGDFLMIHGACKSVGCYAMTDTVMDEIYQYAELALK-NGQQSINIHIFPF 175 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 +MT++NM+ +Q + N FW L + Y E+ + P I + N +Y+ Sbjct: 176 KMTAENMKKFQYSANMDFWQQLAPAYQYVEEYKKIPSISVKNGRYLVN 223 >gi|253990732|ref|YP_003042088.1| exported protein YafK [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782182|emb|CAQ85346.1| putative exported protein YafK [Photorhabdus asymbiotica] Length = 244 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 95/234 (40%), Positives = 124/234 (52%), Gaps = 11/234 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L F SL L + T +P I+IFK E Sbjct: 1 MKKTAAFAAIILMFF-------SSLPPTYAQDTPIELKSTPS---TQLGYPVFIQIFKEE 50 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 ILE++ ++ Y L K Y IC +SG GPK GD ++PEGFY + + LNPNS+Y+ Sbjct: 51 RILELYTKDSHGNYQLAKSYPICNYSGGLGPKTMEGDLKSPEGFYRVKTSQLNPNSRYYR 110 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 SIN+GFPNE+DK+ +G LMIHGEC S GCYAM N M EIY V +L N Q I Sbjct: 111 SINLGFPNEYDKSRGYSGNYLMIHGECKSVGCYAMTNNYMNEIYHYVESALL-NGQYEIN 169 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 I +PFRMT +NM +Q + +Y FW L+ ++YF K + I +IN QY Sbjct: 170 ISIYPFRMTPQNMLRHQASSHYMFWLQLQPAYEYFIKTRRPAAISVINNQYAVN 223 >gi|268593097|ref|ZP_06127318.1| conserved hypothetical protein [Providencia rettgeri DSM 1131] gi|291311366|gb|EFE51819.1| conserved hypothetical protein [Providencia rettgeri DSM 1131] Length = 245 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 85/188 (45%), Positives = 119/188 (63%), Gaps = 2/188 (1%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I+IFK E +LE++++ +Y L K Y IC +SG GPK GD ++PEGFY I Sbjct: 42 IFIQIFKQEGLLELYQKTPSGKYKLSKTYPICKFSGGLGPKKIEGDLKSPEGFYQITAEQ 101 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSL 171 LNPNS+Y+ SINIGFPNEFDKA +G+ LMIHG C S GCYAM +K M EIY V +L Sbjct: 102 LNPNSRYYRSINIGFPNEFDKAQGYSGSYLMIHGSCVSVGCYAMTDKYMGEIYQTVETAL 161 Query: 172 RGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQY 231 QS I + +PF+MT++NM Y+N+ +Y+FW L+ ++YF + + + + +Y Sbjct: 162 LS-GQSVINVSIYPFKMTNENMLRYRNSSHYAFWKQLQPAYEYFNRTGRPAEVSVALGKY 220 Query: 232 -VFFKGQT 238 V + T Sbjct: 221 AVIDQADT 228 >gi|227357845|ref|ZP_03842193.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Proteus mirabilis ATCC 29906] gi|227161955|gb|EEI46973.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Proteus mirabilis ATCC 29906] Length = 250 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 81/228 (35%), Positives = 127/228 (55%), Gaps = 12/228 (5%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +++F I + ++ + P+ ++ P I+IFK EN+LE++ Sbjct: 8 LIIFLTIILTSLFVNAENSSKFLIKPVKKST-----------GEPIYIQIFKEENLLELY 56 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 D + ++ Y IC++SG GPK GD ++PEGFY + LNPNS+++ +IN+GF Sbjct: 57 IEKQDGQLEKIRTYPICSYSGGLGPKKYQGDLKSPEGFYQVNQTQLNPNSRFYRAINLGF 116 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN++D+ TG LMIHG C S GCYAM + M EIY +L+ N Q +I I FPF Sbjct: 117 PNQYDQEQGYTGDFLMIHGACKSVGCYAMTDTVMDEIYQYAELALK-NGQQNINIHIFPF 175 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 +MT++NM+ +Q + N FW L + Y E+ + P I + N +Y+ Sbjct: 176 KMTAENMKKFQYSANMDFWQQLAPAYQYVEEYQKIPVISVKNGRYLVN 223 >gi|226328780|ref|ZP_03804298.1| hypothetical protein PROPEN_02680 [Proteus penneri ATCC 35198] gi|225201966|gb|EEG84320.1| hypothetical protein PROPEN_02680 [Proteus penneri ATCC 35198] Length = 256 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 118/198 (59%), Gaps = 2/198 (1%) Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99 M+ + S P I+IFK E++LE++ +D + ++ Y IC++SG GPK GD + Sbjct: 30 LMKPVKKSTGQPIYIQIFKEESLLELYTEKLDGQLEKVRTYPICSYSGGLGPKKFQGDLK 89 Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQ 159 +PEGFY + + LNPNS+++ +IN+GFPN++DK+ TG LMIHG C S GCYAM + Sbjct: 90 SPEGFYQVNFAQLNPNSRFYRAINLGFPNQYDKSKGYTGDFLMIHGACKSVGCYAMTDPV 149 Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYS-FWNMLKLGHDYFEKN 218 M EIY +L+ QS I I FPF+MT++NM+ +Q + + FW L + Y E Sbjct: 150 MDEIYQYAELALQ-RGQSTINIHIFPFKMTAENMKKHQYSKDMDFFWQQLMPAYQYVEAY 208 Query: 219 HQEPFIQIINKQYVFFKG 236 + P I + + +Y Sbjct: 209 KKIPSITVQDGRYFVNST 226 >gi|171911100|ref|ZP_02926570.1| hypothetical protein VspiD_07990 [Verrucomicrobium spinosum DSM 4136] Length = 219 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 4/208 (1%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIW-KRNVDAEYVLLKEYKICAWSGTFGPK 92 + L ++++ + P IR+FK LE+W K + K + I A SG GPK Sbjct: 9 TPGLTEELRRQGFALGDPIFIRVFKETLELELWIKAKSAPAFRKWKTWPIAAMSGELGPK 68 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGC 152 + GD QAPEGFY + +LNP S Y LS NIG+PN FD+AH RTG+ +M+HG+ S GC Sbjct: 69 TKEGDRQAPEGFYQVTTKSLNPRSSYHLSFNIGYPNAFDQAHQRTGSFIMVHGKAVSIGC 128 Query: 153 YAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM--QLYQNNPNYSFWNMLKL 210 +AM + ++EIY + +L+ QS + FPFRMTS+ + ++ FW L+ Sbjct: 129 FAMTDPVIEEIYLMAEAALK-RGQSSFGVHVFPFRMTSERLLQAGEEHPSLLKFWLDLRP 187 Query: 211 GHDYFEKNHQEPFIQIINKQYVFFKGQT 238 G+ FE Q P I++ K+Y T Sbjct: 188 GYTAFESTQQPPIIKVEEKRYRVTPVGT 215 >gi|114800403|ref|YP_759185.1| hypothetical protein HNE_0455 [Hyphomonas neptunium ATCC 15444] gi|114740577|gb|ABI78702.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 253 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 125/240 (52%), Gaps = 11/240 (4%) Query: 5 YNILLFALFIFL----------NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVI 54 +L A+ FL + A +E L ++ +K + P + Sbjct: 15 IFAILIAMLAFLCLPALLAFAHADTVPETARSRAAYAAQAEPLKAALAEKGLALGSPVFL 74 Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 +I K L + ++ + ++ + + +CA SG GPKI GD QAPEGFY + +NP Sbjct: 75 QITKEPAELTAYVQDTEGKFQPFRTWPVCAVSGDLGPKIREGDHQAPEGFYKVTAGQMNP 134 Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGN 174 S + LS N+G+PN FD+A++RTG+ LM+HG CAS GC+AM ++ ++EI+ +++ + G Sbjct: 135 ASSFHLSFNLGYPNAFDRANDRTGSFLMVHGSCASVGCFAMTDEGIEEIWTLMQAAFEG- 193 Query: 175 MQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 Q + + FPF MT + M + +P+ +FW LK + F + + P + + + Y Sbjct: 194 GQKAVDVHIFPFPMTQQAMAGREASPHAAFWESLKPAWNKFSASGEVPTVSVRDGAYQVR 253 >gi|320353230|ref|YP_004194569.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM 2032] gi|320121732|gb|ADW17278.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM 2032] Length = 266 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 126/241 (52%), Gaps = 11/241 (4%) Query: 7 ILLFALFIFLN------GCHHSRSLIDKAEHPLS---ENLIISMQKKRTSPFHPTVIRIF 57 +L F+L + KAE ++ + +Q K + P +RIF Sbjct: 14 LLFFSLLTLASPWPVPVATGTDLPTTPKAETAMAQTRPKIQQELQAKGFAVGQPIFVRIF 73 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K ILE+W + L K YK+C +SG GPKI GD QAPEGFY + LNPNS Sbjct: 74 KIPGILELWMNKGRG-FELFKAYKVCNYSGFPGPKISEGDWQAPEGFYSVSAEQLNPNSG 132 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 Y L+ +IG+PN FD A RTG +M+HG C S GC+AM +++++EIY + ++L Q Sbjct: 133 YHLAFDIGYPNAFDVAKRRTGNLIMVHGNCKSVGCFAMTDRRIEEIYLLAHEAL-AQGQE 191 Query: 178 HIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 + FPF +T +N++ + +P FW L+ G+ FE + Q P I + N +YV Sbjct: 192 RFDVHIFPFPLTQRNLKKFAASPWIKFWESLEPGYSAFEMSKQVPQIAVQNGEYVVTSRV 251 Query: 238 T 238 Sbjct: 252 P 252 >gi|46204594|ref|ZP_00049770.2| COG3034: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 290 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 78/169 (46%), Positives = 106/169 (62%), Gaps = 1/169 (0%) Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 ++ + Y LLK Y I WS GPK + GD QAPEGFY I +NPNS Y+LS ++G Sbjct: 3 FEARANGHYALLKTYPIFRWSVQLGPKTKQGDRQAPEGFYTITPGQMNPNSSYYLSFDVG 62 Query: 126 FPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 +PN D+A TG +M+HG C+SAGC+AM + M EIYA+ R++ G Q Q Q++P Sbjct: 63 YPNAVDRAKGGTGNYIMVHGTCSSAGCFAMTDASMGEIYALAREAFNG-GQRAFQFQSYP 121 Query: 186 FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 FRMT+ N+ ++N+PN FW LK G DYFE +EP + +YVF Sbjct: 122 FRMTAANVAKFRNDPNAPFWRNLKEGSDYFEALKEEPRVAACGTKYVFG 170 >gi|323137985|ref|ZP_08073059.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242] gi|322396704|gb|EFX99231.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242] Length = 496 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 111/227 (48%), Gaps = 16/227 (7%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 L + A P E+ K +RIFK E LE+W R + + L K + I Sbjct: 263 ARLPEPALRPAPEDAFQQPPPK-FGMGDQVFVRIFKQEGQLELWLRK-NGRFNLYKTFPI 320 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM 142 C WSG GPKI+ D Q+PEGFY + LNP+S Y + N+G+PN FD+ + RTG +M Sbjct: 321 CKWSGRLGPKIKEADYQSPEGFYSVSARQLNPHSNYHRAFNVGYPNAFDRQNGRTGGLVM 380 Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY------ 196 +HG C S GC+AM ++ ++EIY V +LR Q I + FPFRMT + Sbjct: 381 VHGACKSVGCFAMTDRGIEEIYGFVEAALRA-GQKEIAVHIFPFRMTDAAIARETGGGWL 439 Query: 197 -------QNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 SFW LK G+D FE+ + P Y F G Sbjct: 440 AFVGGGGNYAQWTSFWKNLKQGYDLFERTGEPPVAFACGDHYEFDGG 486 >gi|312892268|ref|ZP_07751764.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM 18603] gi|311295243|gb|EFQ72416.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM 18603] Length = 234 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 93/233 (39%), Positives = 131/233 (56%), Gaps = 5/233 (2%) Query: 4 RYNILLFALFIFLN---GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 + ++L + F+ +N L + L + P IRIFK E Sbjct: 3 KALLVLISFFLLINHPVTDLPDSKLAADVRAAVWPRLEKELNNGGFKAGSPIYIRIFKEE 62 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 +ILEIW + D+ Y L K Y +C +SG FG K D ++PEGFYYI LNP S Y L Sbjct: 63 HILEIWVKK-DSTYSLFKTYPVCYFSGGFGTKTRINDGKSPEGFYYITPWQLNPVSHYHL 121 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIG+PN+ +K+ TG D+MIHG CAS GCYAM + ++EIY +V SL Q+ I Sbjct: 122 AINIGYPNQLEKSKGYTGTDIMIHGHCASIGCYAMTDPLIEEIYTVVYKSL-AAGQTAIP 180 Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 + FPF++ + NM+L + +SFWN +K G+D FE P + ++NKQY F Sbjct: 181 LHIFPFKLNATNMKLCAASDYFSFWNNMKAGYDLFESRRIPPVVSVVNKQYAF 233 >gi|312114448|ref|YP_004012044.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC 17100] gi|311219577|gb|ADP70945.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC 17100] Length = 352 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 123/237 (51%), Gaps = 6/237 (2%) Query: 1 MTNRY-NILLFALFIFLNGCHHSRSLIDKAEHPLSEN--LIISMQKKRTSPFHPTVIRIF 57 M R +L+ A+ L + + A + + L + K P IRI+ Sbjct: 1 MQYRLVCVLVSAIAFCLASFQGASATSRDARGAVEKENALAAEFEGKGMKLGSPVFIRIY 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL-NPNS 116 K + LE+W Y L K Y IC ++G GPK+ GD Q+PEG Y + W++L PN Sbjct: 61 KQSSTLELWVEK-GPRYELFKTYGICKFAGGLGPKMYEGDRQSPEGLYRVEWDDLIGPNP 119 Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176 ++ ++NI +PN FDK + R G+ ++IHG+C+S GC+A+ + ++E+Y VR +LRG Q Sbjct: 120 RWHRAMNINYPNAFDKMNGRGGSSILIHGKCSSIGCFAIQDANVEEVYDAVRAALRG-GQ 178 Query: 177 SHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 SH+ + A PFR +L FW+ L+ F+++ P + + +Y F Sbjct: 179 SHVPVLALPFRFAKYAPELDDTRKLNEFWSDLRRADLLFDRDRLPPMAYVCDNRYYF 235 >gi|284007778|emb|CBA73623.1| conserved hypothetical protein [Arsenophonus nasoniae] Length = 182 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 75/162 (46%), Positives = 106/162 (65%), Gaps = 1/162 (0%) Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 ++K Y IC +SG GPK GD ++PEGFY I + L P+SKY+ + N+GFPNE+D+AH Sbjct: 1 MVKSYPICNFSGGLGPKTRQGDLKSPEGFYRITRSQLKPDSKYYRAFNLGFPNEYDQAHG 60 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 TG+ LM+HG C S GCYAM ++ + EIY V ++L N Q IQ+ +PF+MTS NM Sbjct: 61 YTGSYLMVHGGCRSIGCYAMTDRYINEIYRYVENAL-HNGQYEIQVNIYPFKMTSANMNR 119 Query: 196 YQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 ++N+ Y+FW L+ ++YF K +Q P I I QY+ K Sbjct: 120 HRNSRYYTFWQQLQPAYEYFTKTNQLPVINIQQGQYLVNKFP 161 >gi|254786219|ref|YP_003073648.1| hypothetical protein TERTU_2191 [Teredinibacter turnerae T7901] gi|237686206|gb|ACR13470.1| conserved hypothetical protein [Teredinibacter turnerae T7901] Length = 171 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 74/169 (43%), Positives = 106/169 (62%), Gaps = 1/169 (0%) Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 EY L K Y+IC +SG+ GPK GD QAPEGFY++ +LNP S Y LS N+G+PN Sbjct: 4 KSGEEYELFKTYEICTFSGSLGPKTRKGDNQAPEGFYFVKPGSLNPWSSYHLSFNLGYPN 63 Query: 129 EFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188 +++ H TG+ LM+HG+C S G YAM ++ + EIYA+ + + Q ++ AFPFR+ Sbjct: 64 SYERLHGFTGSALMVHGKCVSIGSYAMTDRYINEIYAMAQGAFES-GQPFFRVHAFPFRL 122 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQ 237 S+ ++ Y+NN YSFW LK G+D+F K+ P + +YVF G Sbjct: 123 ESEVLEKYKNNRWYSFWKNLKEGYDHFAKHKVPPNVDSEKGRYVFSAGT 171 >gi|332664143|ref|YP_004446931.1| ErfK/YbiS/YcfS/YnhG family protein [Haliscomenobacter hydrossis DSM 1100] gi|332332957|gb|AEE50058.1| ErfK/YbiS/YcfS/YnhG family protein [Haliscomenobacter hydrossis DSM 1100] Length = 251 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 21/243 (8%) Query: 6 NILLFALFIFLNGCHHSRSLIDK---------AEHPLSENLIISMQKKRTSPFHPTVIRI 56 IL + LN + + A + E L + +K P IR Sbjct: 8 LILTILMLNNLNCSGQQQQTTNTLVDGDRVANARQLVGEKLAQELTQKGLKPGAAIFIRA 67 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 FK+E LE+W ++ ++ K Y IC G GPK + GD Q PEG Y+I NP S Sbjct: 68 FKSEQQLEVWVQD-SLQFRWFKTYHICKVPGELGPKRKEGDLQVPEGLYWIE--VFNPQS 124 Query: 117 KYFLSINIGFPNEFDKAH---NRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRG 173 Y LS+ I +PN D+ + G ++ IHG C S GC + ++ ++E+Y + D+ + Sbjct: 125 SYHLSMGINYPNASDRILSDPKKPGGEIYIHGACGSVGCIPLTDEFIREVYLLALDA-KT 183 Query: 174 NMQSHIQIQAFPFRMTSKNMQ--LYQNNPN-YSFWNMLKLGHDYFEKNHQEPFIQIIN-- 228 Q I + FP RMT +N L +N P+ FW L +D+F + P ++ + Sbjct: 184 AGQEKIPVHIFPCRMTEQNKVNLLARNQPHLMPFWENLAEAYDFFVEKKVVPKYEVESNT 243 Query: 229 KQY 231 +Y Sbjct: 244 GRY 246 >gi|255530608|ref|YP_003090980.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366] gi|255343592|gb|ACU02918.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366] Length = 244 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 9/205 (4%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE-YVLLKEYKICAWSGTFGPKI 93 NL + + I +KNE LE+W + + Y L K Y CA SGT GPK+ Sbjct: 42 ANLQTELSAAGITRPFKLYIAAYKNEGKLELWLKTNGQKAYKLFKIYDFCAHSGTLGPKV 101 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH---NRTGADLMIHGECASA 150 + GD Q PEGFYYI NP S + LS+ + +PN+ D+ R G D+ IHG C + Sbjct: 102 KEGDLQTPEGFYYIN--VFNPKSSFHLSLGVNYPNKVDERRSGKERPGGDIYIHGNCVTV 159 Query: 151 GCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM--QLYQNNPNYSFWNML 208 GC + + +++E+Y + ++ + Q I + FPF+MTS N+ QL Q + W L Sbjct: 160 GCIPLTDDKIKEVYVLAVEA-KNAGQDPIPVHIFPFKMTSVNLNIQLKQYPAQRALWTNL 218 Query: 209 KLGHDYFEKNHQEPFIQIINKQYVF 233 + G+ YFEK++ P + +Y+F Sbjct: 219 ETGYRYFEKHNNLPVVTEKEGKYLF 243 >gi|149279594|ref|ZP_01885723.1| putative inner membrane protein [Pedobacter sp. BAL39] gi|149229630|gb|EDM35020.1| putative inner membrane protein [Pedobacter sp. BAL39] Length = 247 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 9/222 (4%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD-AEYVLLK 78 + + A + + ++ + + +I +K E +LE+W + + Y L + Sbjct: 28 QLTFPRVKAAYQDTWKPMQKALLEAKIPAGSELLIMAYKKEGMLEVWMKPKGTSRYQLFR 87 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH---N 135 Y CA SG GPK++ GD Q PEGFY I NP S + LS+ + +PN D A Sbjct: 88 SYGFCARSGVLGPKVQEGDYQTPEGFYEINA--FNPQSNFHLSLGVSYPNAVDLARSGTK 145 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 + G ++ IHG C + GC + +++++E+Y + ++ R Q I + FPFRM N + Sbjct: 146 KPGGEIYIHGNCVTVGCVPLTDEKIKEVYLLAIEA-RNAGQQRIPVYMFPFRMNEVNFEK 204 Query: 196 Y--QNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 Q +FW +K G+ YFE P I++ + QY K Sbjct: 205 NAKQFPQFRNFWASMKTGYQYFESRKTLPQIRVKSGQYQISK 246 >gi|196234486|ref|ZP_03133311.1| protein of unknown function DUF949 [Chthoniobacter flavus Ellin428] gi|196221467|gb|EDY16012.1| protein of unknown function DUF949 [Chthoniobacter flavus Ellin428] Length = 265 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 27/258 (10%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHP--------------LSENLIISMQKKRTSPFH 50 + A+ + L G H + P L Sbjct: 8 LLVATIAIALSLVGAHAWAQAVPAPASPDNDTTDRIAVARQQHEAALRQKYHAAAVGYPG 67 Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 +R K E +LE+W R+ + L+ Y I A SGT GPK GD Q PEGFY I Sbjct: 68 EVFLRWLKREAMLELWARDPGRRFRLVATYPILASSGTPGPKRREGDRQVPEGFYEINR- 126 Query: 111 NLNPNSKYFLSINIGFPNEFDKA---HNRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167 NP S + LS+ + +PN D H++ G+D+ IHG S GC + + ++E+Y Sbjct: 127 -FNPKSSFHLSLGLNYPNASDLVLSDHDQPGSDIFIHGSNVSIGCAPLGDNAIEEVYLAA 185 Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQLY-----QNNPNYS-FWNMLKLGHDYFEKNHQE 221 D+ + Q+ IQ+ FP RM + + + P + FW L+ G ++FE++ Sbjct: 186 LDA-QARGQARIQVHVFPSRMNGSGWEQFATGEIRQRPELAVFWTQLRPGFEFFERHRTL 244 Query: 222 PFIQII-NKQYVFFKGQT 238 P + + + +Y Sbjct: 245 PTVAVEKDGRYRVQGAAP 262 >gi|256424395|ref|YP_003125048.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588] gi|256039303|gb|ACU62847.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588] Length = 252 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 15/219 (6%) Query: 26 IDKAEHPLSENLIISMQKKRT-SPFHPTVIRIFKNENILEIWKRNV-DAEYVLLKEYKIC 83 + A E L QKK P IR FK ++ LEIW +N + L K Y++C Sbjct: 36 VGTAYRDKEEQLREEFQKKGLAYPAKYIFIRSFKLDSELEIWVKNSVADTFRLFKSYRVC 95 Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH---NRTGAD 140 SG GPK + GD Q PEGFYYI + NPNS Y LS+ I +PN DK + G + Sbjct: 96 TLSGKMGPKRKEGDRQVPEGFYYIN--DFNPNSSYHLSLGINYPNFADKILSDPKKPGGE 153 Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLY---- 196 + IHG C + GC + + ++E+Y + ++ + + Q I + FP + + Y Sbjct: 154 IYIHGSCLTIGCIPLTDDIIEEVYVMAVNA-KNSGQDFIPVHVFPVKFGNIRSMEYLGNF 212 Query: 197 --QNNPNYSFWNMLKLGHDYFEKNHQEPFIQI-INKQYV 232 ++N + FW LK +DYFE +H+ P + + +Y+ Sbjct: 213 TLKDNSSEKFWVDLKYAYDYFEAHHKLPVVLVDEKGKYI 251 >gi|124003370|ref|ZP_01688220.1| pollen allergen Poa pIX/Phl pVI, C-terminal [Microscilla marina ATCC 23134] gi|123991468|gb|EAY30899.1| pollen allergen Poa pIX/Phl pVI, C-terminal [Microscilla marina ATCC 23134] Length = 296 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 13/204 (6%) Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVD-AEYVLLKEYKICAWSGTFGPKIETGDE 98 Q+ + IR K E +E+W R + L++ YK C SG GPK + GD+ Sbjct: 93 LKQQDIQTLDIELFIRAVKLEREVEVWARQKGTKPFKLVRTYKFCESSGELGPKRKDGDK 152 Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT---GADLMIHGECASAGCYAM 155 Q PEGFY+I NP SK+ LS+ + +PN DK T G D+ +HG+C + GC + Sbjct: 153 QIPEGFYHINR--FNPVSKFHLSLGLNYPNRSDKVLGDTTGLGGDIFLHGDCVTVGCIPI 210 Query: 156 NNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNM----QLYQNNPNY-SFWNMLKL 210 + ++E+Y ++ + Q I + FP R+ + + Y+ N FW LK Sbjct: 211 TDNNIRELYVFAVEA-KARGQKKIPVNIFPARLDNAGFDKLKEQYKAQENLVEFWASLKK 269 Query: 211 GHDYFEKNHQEPFIQIIN-KQYVF 233 G++YFE + P I +Y+ Sbjct: 270 GYEYFENTKELPTIIFAKSGKYIV 293 >gi|296125423|ref|YP_003632675.1| ErfK/YbiS/YcfS/YnhG family protein [Brachyspira murdochii DSM 12563] gi|296017239|gb|ADG70476.1| ErfK/YbiS/YcfS/YnhG family protein [Brachyspira murdochii DSM 12563] Length = 247 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 75/190 (39%), Positives = 104/190 (54%), Gaps = 11/190 (5%) Query: 52 TVIRIFKNENILEIWKRN-VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 +I +K E+ILEI+ +N D Y + EYKI A SG GPK GD Q PEGFYYI Sbjct: 61 ILITAYKQEDILEIYAKNKNDKTYKKIAEYKIAAKSGILGPKRMEGDLQVPEGFYYIDR- 119 Query: 111 NLNPNSKYFLSINIGFPNEFDKAH---NRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167 NP S Y+LS+ I +PNE D+ R G D+ IHG + GC M + +++EIY Sbjct: 120 -FNPASSYYLSLGINYPNEADRKKSNAKRLGGDIFIHGANVTIGCMPMTDDKIKEIYLYA 178 Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ---NNPNYSFWNMLKLGHDYFEKNHQEPFI 224 + + N Q+ I + FPF+MT N Y+ + FW +K G+D F+ +E I Sbjct: 179 IYA-KDNGQNKIPVYIFPFKMTDDNFNYYKEIYESSLIDFWKNIKEGYDIFQNTKKEINI 237 Query: 225 QI-INKQYVF 233 +I N Y+F Sbjct: 238 KIDNNGNYIF 247 >gi|300870101|ref|YP_003784972.1| hypothetical protein BP951000_0468 [Brachyspira pilosicoli 95/1000] gi|300687800|gb|ADK30471.1| hypothetical protein BP951000_0468 [Brachyspira pilosicoli 95/1000] Length = 242 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 15/243 (6%) Query: 1 MTNRYNILLFALFIFLNGCHHSRS-----LIDKAEHPLSENLIISMQKKRTSPFH-PTVI 54 M LF L L + + KA + + ++Q S +I Sbjct: 1 MLKYIAASLFILNTLLFSANFLDEQKRYPRVRKAIEDKEQIIKQNLQNNNISINKLNIII 60 Query: 55 RIFKNENILEIWKRNV-DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 +K E+ILEI+ +N D Y + +Y I + SG GPK GD Q PEGFYYI N Sbjct: 61 IAYKEESILEIYAKNNADKTYKKIAQYNIASKSGVLGPKRMEGDLQVPEGFYYIDR--FN 118 Query: 114 PNSKYFLSINIGFPNEFDKAHNRT---GADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170 P S Y+LS+ I +PN+ D+ + G D+ IHG + GC M + +++EIY + Sbjct: 119 PASSYYLSLGINYPNKSDQIKGKRNQLGGDIFIHGSEVTIGCIPMTDDKIKEIYLYAVHA 178 Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQ-LYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQI-IN 228 + N Q I + FPF+MT +N++ +++ +FW +K+G+D F + +E +I N Sbjct: 179 -KNNGQKKIPVYIFPFKMTEENIKNRRESDKLINFWKNIKVGYDVFINSKREIIYKIDEN 237 Query: 229 KQY 231 Y Sbjct: 238 GNY 240 >gi|290476303|ref|YP_003469207.1| hypothetical protein XBJ1_3325 [Xenorhabdus bovienii SS-2004] gi|289175640|emb|CBJ82443.1| conserved hypothetical protein; putative exported protein [Xenorhabdus bovienii SS-2004] Length = 180 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 8/183 (4%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L L ++ ++S + P + P I+IFK E Sbjct: 1 MKKTAFYLSLLLLFHMSCSALAQSTPSWLQSPNERRPLKQ-------PGAEIFIQIFKEE 53 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 +LE++ ++ Y L + Y IC +SG GPK TGD ++PEGFY++ L PNS+Y+ Sbjct: 54 KVLELYTKDNTDHYQLAQSYPICNYSGGLGPKTLTGDFKSPEGFYHVNLKQLKPNSRYYR 113 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +IN+GFPNEFDK +G +LMIHG C S GCYAM ++ + EIY ++ Q I+ Sbjct: 114 AINLGFPNEFDKFRGYSGNNLMIHGGCKSIGCYAMTDRYIDEIYRYAESAI-SYGQDEIK 172 Query: 181 IQA 183 I Sbjct: 173 INI 175 >gi|213026129|ref|ZP_03340576.1| hypothetical protein Salmonelentericaenterica_28298 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 147 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 56/128 (43%), Positives = 80/128 (62%), Gaps = 1/128 (0%) Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVR 168 N L P+S+++ +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V Sbjct: 1 RNQLKPDSRFYKAINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVT 60 Query: 169 DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIIN 228 +L Q +Q+ +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ Sbjct: 61 AALV-FGQPSVQVSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVD 119 Query: 229 KQYVFFKG 236 +YV K Sbjct: 120 GRYVVSKP 127 >gi|225619280|ref|YP_002720506.1| hypothetical protein BHWA1_00333 [Brachyspira hyodysenteriae WA1] gi|225214099|gb|ACN82833.1| conserved hypothetical protein [Brachyspira hyodysenteriae WA1] Length = 233 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 10/176 (5%) Query: 52 TVIRIFKNENILEIWKRNV-DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 +I ++K E+ILEI+ +N D+ Y + Y I A SG GPK GD Q PEGFYYI Sbjct: 60 ILITVYKQEDILEIYAKNKSDSTYKKIASYNIAAKSGILGPKRMEGDLQVPEGFYYIDR- 118 Query: 111 NLNPNSKYFLSINIGFPNEFDKAH---NRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167 NP S Y+LS+ I +PNE DK +R G D+ IHG + GC M + +++EIY Sbjct: 119 -FNPASSYYLSLGINYPNESDKKKSNASRLGGDIFIHGANVTIGCMPMTDDKIKEIYLYA 177 Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNM---QLYQNNPNYSFWNMLKLGHDYFEKNHQ 220 + + N Q+ I + FPF+MT +N + Y N +FW+ +K G+D F+ + + Sbjct: 178 VYA-KDNGQNKIPVYIFPFQMTDRNFDYYKKYYNESLINFWDNIKKGYDIFQNSKK 232 >gi|218678022|ref|ZP_03525919.1| hypothetical protein RetlC8_03792 [Rhizobium etli CIAT 894] Length = 262 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 55/112 (49%), Positives = 82/112 (73%), Gaps = 1/112 (0%) Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPF 186 PN +D A+ RTG+DLMIHG C+S+GCY+M ++Q+ EIYA RD+ +G Q+ +Q+QAFPF Sbjct: 1 PNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFKG-GQATVQLQAFPF 59 Query: 187 RMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQT 238 RMT++NM ++ + +Y FW MLK+G+D FE + P + + K+YVF + T Sbjct: 60 RMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVFNQQAT 111 >gi|300723899|ref|YP_003713210.1| hypothetical protein XNC1_3038 [Xenorhabdus nematophila ATCC 19061] gi|297630427|emb|CBJ91092.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061] Length = 121 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 59/120 (49%), Positives = 82/120 (68%), Gaps = 1/120 (0%) Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAM 155 GD ++PEGFY++ L PNS Y+ +IN+GFPNEFDK+ +G +LMIHGEC S GCYAM Sbjct: 3 GDLKSPEGFYHVSLKQLKPNSHYYRAINLGFPNEFDKSKGYSGNNLMIHGECKSIGCYAM 62 Query: 156 NNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYF 215 N+ M EIY + + Q I+I +PFRMT +NM+ Y+NN N+ FW L+ ++Y+ Sbjct: 63 TNRYMDEIYQYAESAF-YHGQLAIKINIYPFRMTPQNMRRYKNNDNFLFWKQLQHAYEYY 121 >gi|294054888|ref|YP_003548546.1| ErfK/YbiS/YcfS/YnhG family protein [Coraliomargarita akajimensis DSM 45221] gi|293614221|gb|ADE54376.1| ErfK/YbiS/YcfS/YnhG family protein [Coraliomargarita akajimensis DSM 45221] Length = 235 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 28/233 (12%) Query: 1 MTNRYNILLFA--LFIFLNGCHHSRSLI-------DKAEHPLSENLIISMQ-KKRTSPFH 50 M R+ ILL L + L C S + + + + S + Sbjct: 1 MRQRFCILLIGTILLVLLYLCGRSIWYPVYIKLRGGRTVSEVVHEIKSTQSFNDDFSQWK 60 Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 + FK E +E+W ++++ +SG GPK+ GD Q PEG Y I + Sbjct: 61 SLHLLCFKEERKIEVWVSGQSGTKE-IRQFDFTGYSGELGPKLRQGDGQIPEGIYEIEY- 118 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIY 164 LNPNS Y LS+ I +PNEFD+ R G D+ IHG+ A+ GC + + ++E++ Sbjct: 119 -LNPNSSYHLSMKISYPNEFDRLKGREDRREKLGYDIFIHGKSATVGCIPIGDDGIEELF 177 Query: 165 AIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEK 217 +V + + +Q+ P+ M L + W +D E Sbjct: 178 LMVSE----FGKDRVQVIISPYDMRQGRRALEITEIS---WEN--ELYDIIEA 221 >gi|83646750|ref|YP_435185.1| hypothetical protein HCH_04045 [Hahella chejuensis KCTC 2396] gi|83634793|gb|ABC30760.1| uncharacterized protein conserved in bacteria [Hahella chejuensis KCTC 2396] Length = 248 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 22/223 (9%) Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEIWKRNV 70 L++ L G ++ + L + + + P + FK E LE+W Sbjct: 34 LYLDLKGRRTVDDVMRNIGPVVEPGLQDAFARAGVTYPPQRITLLAFKEEKRLELWAE-Q 92 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130 D VL+ Y I A SG GPK+ GD Q PEGFY I NPNS + LS+ + +P+ F Sbjct: 93 DGVQVLVSAYPIQAASGVAGPKLREGDRQVPEGFYRIEG--FNPNSSFHLSMKLNYPSPF 150 Query: 131 D----KAHNRT--GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 D +A RT G D+ IHG+ +S GC AM + +++++ + ++I + Sbjct: 151 DLKHAQAEGRTSPGGDIFIHGKASSVGCLAMGDPAVEDLFILA----NRVGVTNIDVIIA 206 Query: 185 P--FRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQ 225 P FRM + W L + E++ + + Sbjct: 207 PHDFRMR----APEATPQSAPAW--LPELYQDIEQSLRPFAVS 243 >gi|163737962|ref|ZP_02145378.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis BS107] gi|161388578|gb|EDQ12931.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis BS107] Length = 172 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 74/189 (39%), Gaps = 43/189 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L A + L GC S P + + + K Sbjct: 1 MDRRTFGLGAAATLGLAGCSSGPSKFRSYNGPEVTS-----------------VVVNKGA 43 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +L+EY + G K GD + PEG Y I NPNS+Y L Sbjct: 44 RKVYLLHHED-----VLREYDMELGFAPLGHKQIEGDGKTPEGTYLIDRR--NPNSRYHL 96 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 SI I +PN D+A + G ++ IHGE +AGC A+ N +++ Sbjct: 97 SIGISYPNGQDRAKASAMGKKPGGEIFIHGEPNNAKERKRAARVDDWTAGCIAVTNDEIE 156 Query: 162 EIYAIVRDS 170 EIYA+VRD Sbjct: 157 EIYAMVRDG 165 >gi|163742642|ref|ZP_02150028.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis 2.10] gi|161384227|gb|EDQ08610.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis 2.10] Length = 172 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 74/189 (39%), Gaps = 43/189 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L A + L GC S P + + + K Sbjct: 1 MDRRTFGLGAAATLGLAGCSSGPSKFRSYNGPEVTS-----------------VVVNKGA 43 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +L+EY + G K GD + PEG Y I NPNS+Y L Sbjct: 44 RKVYLLHHED-----VLREYDMELGFAPLGHKQIEGDGKTPEGTYLIDRR--NPNSRYHL 96 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 SI I +PN D+A + G ++ IHGE +AGC A+ N +++ Sbjct: 97 SIGISYPNGQDRAKAAAMGKKPGGEIFIHGEPNNAKERKRAARVDDWTAGCIAVTNDEIE 156 Query: 162 EIYAIVRDS 170 EIYA+VRD Sbjct: 157 EIYAMVRDG 165 >gi|254476164|ref|ZP_05089550.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria sp. R11] gi|214030407|gb|EEB71242.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria sp. R11] Length = 175 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 40/189 (21%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L A + + GC S ++K + I + K Sbjct: 1 MDRRAFGLGIAATLGVAGCSSSTGPVNKFLAYNGPEVTS--------------IVVNKGA 46 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +L+EYK+ G K GD + PEG Y+I NPNS Y L Sbjct: 47 RKVYLMHDQD-----ILREYKMDLGFAPAGHKAVEGDGKTPEGTYFIDRR--NPNSAYHL 99 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 SI I +PN D+A + G ++ IHGE +AGC A+ N +++ Sbjct: 100 SIGISYPNAEDRAKAAAMGKKPGGEIFIHGEPNSAKARKRAARVDDWTAGCIAVKNHEIE 159 Query: 162 EIYAIVRDS 170 EIYA+V D Sbjct: 160 EIYAMVADG 168 >gi|86136792|ref|ZP_01055370.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193] gi|85826116|gb|EAQ46313.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193] Length = 174 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 75/189 (39%), Gaps = 41/189 (21%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L + + GC + + + + + + K Sbjct: 1 MDRRAFGLTAVASLAVAGCGRGPQV-SRFKTYGGPEVTS--------------VVVNKGA 45 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +L+EYK+ G K GD + PEG Y I NPNS + L Sbjct: 46 RKVYLLHGED-----ILREYKMDLGFAPLGHKRVEGDGKTPEGLYRIDRR--NPNSAFHL 98 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 SI I +PN D+AH R G ++ IHGE +AGC A+ N +++ Sbjct: 99 SIGISYPNAEDRAHARALGKRPGGEIFIHGEPNNEKDRKRAARVSDWTAGCIAVKNDEIE 158 Query: 162 EIYAIVRDS 170 EIYA+VRD Sbjct: 159 EIYAMVRDG 167 >gi|213421922|ref|ZP_03354988.1| hypothetical protein Salmonentericaenterica_31013 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 119 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 2/121 (1%) Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++ + + +Y LL YKIC +SG GPK GD ++PEGFY + N L P+S+++ Sbjct: 1 RTLDLYVK-MGEQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKPDSRFYK 59 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQ 180 +INIGFPN +D+AH G LMIHG C S GCYAM + + EI+ V +L Q +Q Sbjct: 60 AINIGFPNAYDRAHGYDGKYLMIHGACVSVGCYAMTDSGIDEIFQFVTAALV-FGQPSVQ 118 Query: 181 I 181 + Sbjct: 119 V 119 >gi|83942056|ref|ZP_00954518.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36] gi|83953105|ref|ZP_00961827.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1] gi|83842073|gb|EAP81241.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1] gi|83847876|gb|EAP85751.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36] Length = 165 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 40/183 (21%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R IL + L C S+ + P + + K + Sbjct: 1 MKRRNLILGGTALVALGACSSSK--FKRYNGPQVT-----------------YVIVNKGD 41 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + + +L+ Y I G K+ GD + PEG Y I NPNS++ L Sbjct: 42 RRMYLMHHD-----KVLESYDIKLGFAPVGHKVYEGDGRTPEGIYMIDRR--NPNSRFHL 94 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHG---------ECASAGCYAMNNKQMQEIYAI 166 SI I +PNE D+A G D+ IHG + GC +++N +M+EIYA+ Sbjct: 95 SIGINYPNEMDRARAEALGKSPGGDIFIHGQKTAKDKNRTDWTWGCISVSNDEMEEIYAM 154 Query: 167 VRD 169 V D Sbjct: 155 VGD 157 >gi|254487420|ref|ZP_05100625.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101] gi|214044289|gb|EEB84927.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101] Length = 166 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 39/181 (21%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R IL + L+ C + ++ + + K + Sbjct: 1 MKRRNFILGGTALVALSACSGDSKFKRYSGPQVT------------------YVVVNKGD 42 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + ++ +L+ Y I G K GD + PEG Y+I NPNSK+ L Sbjct: 43 RRMYLMHQD-----KVLEAYDIRLGFAPVGHKAHEGDGRTPEGRYWIDRR--NPNSKFHL 95 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGE---------CASAGCYAMNNKQMQEIYAI 166 S+ I +PN+ D+A+ + G D+ IHG+ + GC +++N+++++IYA+ Sbjct: 96 SLGISYPNDNDRANAAALGKQPGGDIFIHGQKAADKKNINDWTWGCISVSNQEIEDIYAM 155 Query: 167 V 167 V Sbjct: 156 V 156 >gi|259417350|ref|ZP_05741269.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TrichCH4B] gi|259346256|gb|EEW58070.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TrichCH4B] Length = 203 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 44/189 (23%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R + GC ++ P++ I I K Sbjct: 33 MHRRTFGAGILATLGAAGCSSGPNIRRYNGPPVTS------------------IVINKGS 74 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + E +LKEY++ G K GD + PEG Y I NP S+++L Sbjct: 75 RRMYLL-----NETKVLKEYEVGLGFAPVGHKQIEGDGRTPEGTYRIDRR--NPRSQFYL 127 Query: 121 SINIGFPNEFDKAH-----NRTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S+ I +PN D+A+ G D+ IHGE +AGC A++N++++ Sbjct: 128 SLGISYPNAADRAYASSLGASPGGDIFIHGEPNDRADRRRAARTQDWTAGCIAVSNEEIE 187 Query: 162 EIYAIVRDS 170 EI+++V D Sbjct: 188 EIWSMVNDG 196 >gi|260431994|ref|ZP_05785965.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260415822|gb|EEX09081.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 192 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 72/189 (38%), Gaps = 43/189 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L + L+ C S + P + I + K Sbjct: 21 MDRRAFGLGALATLSLSACGTSGPRFLTYDGPEVTS-----------------IVVNKGA 63 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +L+EY I G K GD + PEG Y I NP S+Y L Sbjct: 64 RKMYLLHHE-----QILREYDIDLGFAPNGTKTRRGDGRTPEGTYLIDRR--NPRSRYHL 116 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S+ I +PN D A + G D+ IHG+ +AGC A+ N +++ Sbjct: 117 SVGISYPNAQDIAKAKAMGVDPGGDIFIHGQPNLRKELKRAKKTPDWTAGCIAVKNHEIE 176 Query: 162 EIYAIVRDS 170 EIYA+V++ Sbjct: 177 EIYAMVKEG 185 >gi|254509663|ref|ZP_05121730.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium KLH11] gi|221533374|gb|EEE36362.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium KLH11] Length = 172 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 75/189 (39%), Gaps = 43/189 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L + L+ C ++ P +L+ I K Sbjct: 1 MDRRAFGLGAVATLGLSACASAKPRFLSYRGPEVTSLV-----------------INKGA 43 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +L+EY++ G K GD + PEG Y I NP S+Y L Sbjct: 44 RKMYLLHNE-----QILREYEVDLGFAPKGTKTRKGDGRTPEGTYLIDRR--NPRSRYHL 96 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S+ I +PN D+A + G D+ IHG+ +AGC A+ N++M+ Sbjct: 97 SLGISYPNSADRAQAKAAGVDPGGDIFIHGQPNLRSELKRAKKTPDWTAGCIAVKNEEME 156 Query: 162 EIYAIVRDS 170 EIYA+V + Sbjct: 157 EIYAMVNEG 165 >gi|126738470|ref|ZP_01754175.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. SK209-2-6] gi|126720269|gb|EBA16975.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. SK209-2-6] Length = 174 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 41/189 (21%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L A + L GC + + + + + + + K Sbjct: 1 MDRRVFGLSVAASLTLAGCGST-NYASRFKTYNGPEVTS--------------VVVNKGA 45 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +L+EYK+ G K GD + PEG Y I NPNS Y L Sbjct: 46 RKIYLL-----NGESILREYKMDLGFAPLGHKQIEGDGKTPEGLYRIDRR--NPNSSYHL 98 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 SI I +PN D A+ R G ++ IHGE +AGC A+ N +++ Sbjct: 99 SIGISYPNASDVAYARSIGKRPGGEIFIHGEPNERKARKRASRVSDWTAGCIAVKNSEIE 158 Query: 162 EIYAIVRDS 170 EIYA+VRD Sbjct: 159 EIYAMVRDG 167 >gi|159046034|ref|YP_001534828.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12] gi|157913794|gb|ABV95227.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12] Length = 166 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 24/146 (16%) Query: 42 QKKRTSPFHPTV--IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99 K P V I +FK E + + + +L+ + I G K GD + Sbjct: 21 SSKFLDYEGPEVTRIVVFKGERRMYLMNED-----RVLRGFDIDLGFAPEGHKQVEGDGK 75 Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC------- 147 PEG Y I NPNS + LS+ I +PN D A R G ++ IHG+ Sbjct: 76 TPEGRYRIDRR--NPNSSFHLSLGISYPNTADVARARAMGQSPGGNIFIHGQPNLLGPQT 133 Query: 148 ---ASAGCYAMNNKQMQEIYAIVRDS 170 +AGC A+ N +M+EIYA+V D Sbjct: 134 EENWTAGCIAVTNAEMEEIYAMVEDG 159 >gi|84685767|ref|ZP_01013663.1| ErfK/YbiS/YcfS/YnhG family protein [Maritimibacter alkaliphilus HTCC2654] gi|84665860|gb|EAQ12334.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium HTCC2654] Length = 222 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 51/200 (25%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R + A F+ L C S P I +FK Sbjct: 2 MNRRVMLASTAAFVGLTAC----SKFKTYNGPEVTE-----------------IFVFKEN 40 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + L EY + +G K + GD + PEG Y I NP+S + L Sbjct: 41 RKMYLMHHQTA-----LAEYDVHLGFSPYGHKQQKGDGRTPEGSYRINRR--NPDSAFHL 93 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNNKQMQEIYA 165 S+ + +PN+ D+ + G D+ IHG +AGC A+ NK++++IYA Sbjct: 94 SVGLDYPNDTDRKIAKEVGVSPGGDIFIHGGPTRKEDKNKADWTAGCIAVTNKEIEDIYA 153 Query: 166 IVRDSLRGNMQSHIQIQAFP 185 +VRD I FP Sbjct: 154 MVRDGT--------PIHIFP 165 >gi|84500743|ref|ZP_00998992.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597] gi|84391696|gb|EAQ04028.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597] Length = 165 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 42/185 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M IL+ A+ + L+GC K + + + ++K + Sbjct: 1 MRFLSLILMIAIGLGLSGCAS------KFKTYYGPEVTQ--------------VLVYKAD 40 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + + +LK Y+I G K GD + PEG Y I NP+S++ L Sbjct: 41 RRMYLMHHD-----EVLKSYRIGLGFAPVGHKQFEGDGRTPEGTYRIDRR--NPDSEFHL 93 Query: 121 SINIGFPNEFDKA----HNR-TGADLMIHGEC----------ASAGCYAMNNKQMQEIYA 165 S+ + +PN D A + G D+ IHG +AGC A+ N ++++IYA Sbjct: 94 SVGLSYPNTRDVAFATSQGKSPGGDIFIHGLPNRFKKSGSRDWTAGCIAVRNHEIEDIYA 153 Query: 166 IVRDS 170 +V+D Sbjct: 154 MVKDG 158 >gi|89067448|ref|ZP_01154961.1| hypothetical protein OG2516_11426 [Oceanicola granulosus HTCC2516] gi|89047017|gb|EAR53071.1| hypothetical protein OG2516_11426 [Oceanicola granulosus HTCC2516] Length = 164 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 77/198 (38%), Gaps = 47/198 (23%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +LL L C S+ P++ ++++K + Sbjct: 1 MNAIRLVLLMVGLTLLASCAPSK-FRTYNGPPVTS------------------VQVWKTD 41 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 ++ + +LK Y G K GD + PEG YYI NPNS Y L Sbjct: 42 RVMALMSGT-----RVLKTYDFEMGFAPQGHKYFEGDGRTPEGVYYIDRR--NPNSDYHL 94 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 SI I +P+E D A G D+ IHG +AGC A++N ++EIYA+V Sbjct: 95 SIGISYPDEEDIARALEAGLEPGGDIFIHGTPKLFADRTDWTAGCIAVSNDAVEEIYAMV 154 Query: 168 RDSLRGNMQSHIQIQAFP 185 +D I +P Sbjct: 155 QDGT--------PIVIYP 164 >gi|260429237|ref|ZP_05783214.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45] gi|260419860|gb|EEX13113.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45] Length = 173 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 77/200 (38%), Gaps = 50/200 (25%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M IL+ AL L C + E T + + K+ Sbjct: 1 MRFFRLILIIALLGGLGACSSKFRTYNGPEV--------------------TQVVVKKST 40 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + + +L+ Y I G K GD + PEG Y+I NPNS + L Sbjct: 41 RRMYLLHND-----KVLESYDIGLGFQPQGHKQYEGDGKTPEGLYFIDRR--NPNSNFHL 93 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC------------------ASAGCYAMNN 157 SI I +PN +D+A G D+ IHG + GC A+++ Sbjct: 94 SIGISYPNPYDRAFAASSGKSPGGDIFIHGGPPKDKKRRGGGSWRSNGRDWTWGCIAVSD 153 Query: 158 KQMQEIYAIVRDSLRGNMQS 177 ++M++IYA+VRD +Q Sbjct: 154 REMEDIYAMVRDGTPITIQP 173 >gi|237752719|ref|ZP_04583199.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376208|gb|EEO26299.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 324 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 87/275 (31%), Gaps = 42/275 (15%) Query: 1 MTN-RYNILLFALFIFLNGCHHSRSLIDKAE-HPLSENLIISMQKKRT------------ 46 M + L L G L K + + + MQ + Sbjct: 1 MKFFKIFYLCLVLSFASAGDFEWVELYKKGGVSAIEKKIDSIMQTRDFWSGVLREQDTRF 60 Query: 47 --SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + KN L ++ N L G K + GD P G Sbjct: 61 GYYEDLKYLFIATKNAPTLRLYALNEGKWNEKLNV--ESLVGSKGGHKEKEGDLATPIGV 118 Query: 105 YYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAM 155 Y + +N + Y L+ +PN +D+ RTG + IHG + GC A+ Sbjct: 119 YSLNARLVNLDQYYGPLAFATNYPNLYDRLQKRTGYGIWIHGMPLDGNRKELNTRGCIAI 178 Query: 156 NNKQMQEIYAIV--RDSLRGNMQSHI-------------QIQAFPFRMTSKNMQLYQNNP 200 N ++ + A++ R +L ++ + + N++ Y Sbjct: 179 ENDKLSSVDALINYRQALLITFENSFKEVKKEDLSILLADLYVWKDAWKESNIEKYLEFY 238 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + F +D F +N + F + K+ VF + Sbjct: 239 SKDFIRFDGNKYDDFAQNKRRIFAKNEKKEIVFSQ 273 >gi|330447689|ref|ZP_08311337.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491880|dbj|GAA05834.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 233 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 33/241 (13%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLI--------------DKAEHPLSENLIISMQKKRT 46 M + + L +F + + S + + + + Sbjct: 1 MFKKALLPLLVMFTAVTDAQAASSYATYPPAGSRTVDDVMKRYSPFVEPRIKRYFESVGL 60 Query: 47 S-PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 + P + K E LE+W ++ +K Y I SG GPK+ GD+Q PEG Y Sbjct: 61 TYPPKNIALFAMKEEMSLELWAEEK-GKWSYVKRYDIEKISGKKGPKLREGDKQVPEGIY 119 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQ 159 + + LNPNS++ LS+ + +PN FD+ + R G+++ IHG+ AS GC AM + Sbjct: 120 RV--SLLNPNSRFHLSMKLDYPNAFDRKYARLEGRTSPGSNIFIHGKQASTGCLAMGDYS 177 Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNH 219 ++E++ + +I++ P + N P FW + + E+ Sbjct: 178 IEELFLLAE----RTGLDNIEVVISPRDPKKGKLTAALNQP---FWTQI--LYRNIEQEA 228 Query: 220 Q 220 + Sbjct: 229 R 229 >gi|52841744|ref|YP_095543.1| lipoprotein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|30577829|emb|CAD90960.1| LssA protein [Legionella pneumophila] gi|52628855|gb|AAU27596.1| lipoprotein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 243 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 32/241 (13%) Query: 1 MTNRYNIL-------LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52 M + IL LFA+ LN I + + LI K S P Sbjct: 11 MKRFFPILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI 70 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + FK+E +E+W +N + E+ + +Y + +SG GPK+ D+Q PEG Y + N Sbjct: 71 ALLAFKSERKVELWAKNPNQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NF 128 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166 NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ + Sbjct: 129 NPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 188 Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF----WNMLKLGHDYFEKNHQEP 222 R +IQ+ P N YQ +F W L + ++ + Sbjct: 189 AR----RVGLKNIQVIIAP------NDLRYQKPSTSTFAQPRW--LPELYKQITESLKPF 236 Query: 223 F 223 Sbjct: 237 K 237 >gi|54297427|ref|YP_123796.1| secretion system protein A [Legionella pneumophila str. Paris] gi|53751212|emb|CAH12623.1| Legionella secretion system protein A [Legionella pneumophila str. Paris] Length = 243 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 32/241 (13%) Query: 1 MTNRYNIL-------LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52 M ++IL LFA+ LN I + + LI K S P Sbjct: 11 MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI 70 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + FK+E +E+W +N E+ + +Y + +SG GPK+ D+Q PEG Y + N Sbjct: 71 ALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NF 128 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166 NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ + Sbjct: 129 NPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 188 Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF----WNMLKLGHDYFEKNHQEP 222 R +IQ+ P N YQ +F W L + ++ + Sbjct: 189 AR----RVGLKNIQVIIAP------NDLRYQKPSTSTFAQPRW--LPELYKQISESLKPF 236 Query: 223 F 223 Sbjct: 237 K 237 >gi|54294442|ref|YP_126857.1| secretion system protein A [Legionella pneumophila str. Lens] gi|30577820|emb|CAD90952.1| LssA protein [Legionella pneumophila str. Corby] gi|53754274|emb|CAH15751.1| Legionella secretion system protein A [Legionella pneumophila str. Lens] Length = 243 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 32/241 (13%) Query: 1 MTNRYNIL-------LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52 M ++IL LFA+ LN I + + LI K S P Sbjct: 11 MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI 70 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + FK+E +E+W +N E+ + +Y + +SG GPK+ D+Q PEG Y + N Sbjct: 71 ALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NF 128 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166 NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ + Sbjct: 129 NPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 188 Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF----WNMLKLGHDYFEKNHQEP 222 R +IQ+ P N YQ +F W L + ++ + Sbjct: 189 AR----RVGLKNIQVIIAP------NDLRYQKPSTSTFAQPRW--LPELYKQITESLKPF 236 Query: 223 F 223 Sbjct: 237 K 237 >gi|86358120|ref|YP_470012.1| hypothetical protein RHE_CH02508 [Rhizobium etli CFN 42] gi|86282222|gb|ABC91285.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 189 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 67/94 (71%), Gaps = 1/94 (1%) Query: 142 MIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPN 201 M+HG C+S+GC+A+ ++ + EIYA+V +LRG Q Q+QA+PFRMT +N+ ++++PN Sbjct: 1 MVHGACSSSGCFALTDQGVGEIYAVVEKALRG-GQQAFQVQAYPFRMTPQNLAAHRDDPN 59 Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 ++FW LK G+D FE +EP + +++Y+F Sbjct: 60 FAFWKNLKEGYDIFEVRRREPRVAACSRKYIFDA 93 >gi|148359048|ref|YP_001250255.1| lipoprotein [Legionella pneumophila str. Corby] gi|296107097|ref|YP_003618797.1| lipoprotein [Legionella pneumophila 2300/99 Alcoy] gi|148280821|gb|ABQ54909.1| lipoprotein [Legionella pneumophila str. Corby] gi|295648998|gb|ADG24845.1| lipoprotein [Legionella pneumophila 2300/99 Alcoy] Length = 233 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 32/241 (13%) Query: 1 MTNRYNIL-------LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52 M ++IL LFA+ LN I + + LI K S P Sbjct: 1 MKRFFSILFILYCCNLFAMAPKLNWDKAIDKAIKRYGLRVEPQLISYFSKAGVSYPPKEI 60 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + FK+E +E+W +N E+ + +Y + +SG GPK+ D+Q PEG Y + N Sbjct: 61 ALLAFKSERKVELWAKNPSQEWTHIHDYPLTGFSGRLGPKLRENDKQIPEGIYKLV--NF 118 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166 NP S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ + Sbjct: 119 NPFSSMHLSMMINYPNSFDRQKGYMDGRKELGNNIFIHGKNLSVGCLAVGDLAIDQLFIL 178 Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF----WNMLKLGHDYFEKNHQEP 222 R +IQ+ P N YQ +F W L + ++ + Sbjct: 179 AR----RVGLKNIQVIIAP------NDLRYQKPSTSTFAQPRW--LPELYKQITESLKPF 226 Query: 223 F 223 Sbjct: 227 K 227 >gi|83955789|ref|ZP_00964331.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1] gi|83839794|gb|EAP78971.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1] Length = 160 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 43/180 (23%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +LL L FL+GC + E T +RI+K + +L + Sbjct: 1 MLLGGLATFLSGCASKFRSYNGPEV--------------------TRLRIYKAQRLLVL- 39 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 D +L+ Y I G K GD + PEG Y I NP+S + LSI I F Sbjct: 40 ----DGTDDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYLIDRR--NPDSLFHLSIGISF 93 Query: 127 PNEFDKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDS 170 PNE D A + G D+ IHG +AGC ++ ++Q+++IYA+VRD Sbjct: 94 PNEADIAFAKAQGKSPGGDIFIHGGPRKGIDPMNKRDWTAGCISVTDRQIEDIYAMVRDG 153 >gi|163735640|ref|ZP_02143071.1| ErfK/YbiS/YcfS/YnhG [Roseobacter litoralis Och 149] gi|161391068|gb|EDQ15406.1| ErfK/YbiS/YcfS/YnhG [Roseobacter litoralis Och 149] Length = 170 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 51/197 (25%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 R +LL L FL+GC E T +R++K + +L Sbjct: 8 RRAVLLGGLAAFLSGCASKFRSYGGPEV--------------------TRVRLYKGQRLL 47 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123 + D +L+ Y + G K GD + PEG Y + NP S Y LS+ Sbjct: 48 VL-----DGADRVLQTYPVGLGFAPEGHKQFEGDGRTPEGTYIVDKR--NPESTYHLSVG 100 Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIV 167 I +PNE D A G D+ IHG +AGC A+ ++Q+++IYA+V Sbjct: 101 ISYPNEVDIAFAEAQGLSPGGDIFIHGGPRPGIDPTDVRDWTAGCIAVTDRQIEDIYAMV 160 Query: 168 RDSLRGNMQSHIQIQAF 184 +D I F Sbjct: 161 KDGT--------PIHIF 169 >gi|86139674|ref|ZP_01058241.1| hypothetical protein MED193_02185 [Roseobacter sp. MED193] gi|85823565|gb|EAQ43773.1| hypothetical protein MED193_02185 [Roseobacter sp. MED193] Length = 170 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 79/197 (40%), Gaps = 51/197 (25%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 R +LL L FL+GC D E T +R++K + +L Sbjct: 8 RRAVLLGGLAAFLSGCAGKFRSYDGPEV--------------------TRLRLYKGQRLL 47 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123 + D +L+ Y I G K GD + PEG Y + NP S Y LS+ Sbjct: 48 VL-----DGSDRVLQTYPIGLGFAPQGHKQFEGDGRTPEGTYIVDKR--NPESTYHLSVG 100 Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIV 167 I +PNE D A G D+ IHG +AGC A+ ++Q+++IYA+V Sbjct: 101 ISYPNEADIAFAAAQGLSPGGDIFIHGGPRPGIDPTDIRDWTAGCIAVTDRQIEDIYAMV 160 Query: 168 RDSLRGNMQSHIQIQAF 184 +D I F Sbjct: 161 KDGT--------PIHIF 169 >gi|149377346|ref|ZP_01895091.1| hypothetical protein MDG893_17682 [Marinobacter algicola DG893] gi|149358358|gb|EDM46835.1| hypothetical protein MDG893_17682 [Marinobacter algicola DG893] Length = 187 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 28/170 (16%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 + SL +PLS + + T ++R K E L + + +++ Sbjct: 20 AFAFSLSLAPLYPLSASELPMGAMDETPEVSEVLVR--KEERRLYLLSGD-----QVVRS 72 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN---- 135 Y+I G K+ GD++ PEG Y + W N NS ++ SI+I +PN D+ Sbjct: 73 YRIGLGDNPSGHKLYEGDKRTPEGKYVLDWR--NSNSDFYKSIHISYPNAEDREQASAWG 130 Query: 136 -RTGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDS 170 G +MIHG + GC A++N++M EI+ +V D Sbjct: 131 LDPGGSIMIHGLPNEAGDMAFAFLGLDWTDGCIAVSNEEMDEIWQLVADG 180 >gi|89052763|ref|YP_508214.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1] gi|88862312|gb|ABD53189.1| ErfK/YbiS/YcfS/YnhG [Jannaschia sp. CCS1] Length = 160 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 53/198 (26%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI--FKNE 60 R+ ++ + L GC + P V R+ +K E Sbjct: 1 MRFLLIAVLTLVALTGCS-----------------------RFIDYDGPQVTRVLVYKGE 37 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 ++ + N +L+ Y+I G K+E GD + PEG Y I NPNS+++L Sbjct: 38 RMMYLMHNND-----VLESYEIELGFAPEGHKLEEGDGRTPEGEYMIDRR--NPNSQWYL 90 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 SI I +PNE D A R G D+ IHG + GC A+ N +M++IYA+V Sbjct: 91 SIGISYPNEDDIAQARERGVDPGGDIFIHGTPRPFRRDQDWTVGCIAVTNAEMRQIYAMV 150 Query: 168 RDSLRGNMQSHIQIQAFP 185 + I +P Sbjct: 151 ENGT--------PISIYP 160 >gi|163732991|ref|ZP_02140435.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149] gi|161393526|gb|EDQ17851.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149] Length = 159 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 39/172 (22%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 A + L+ C + ++ + + K + + Sbjct: 4 AALLSLSACATGSKFKRYSGPEVT------------------FVVVNKGARRMHLLHNES 45 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130 LLK Y I G K GD + PEG Y I NPNS + LS+ I +PN Sbjct: 46 -----LLKSYDIHLGFAPVGHKQFEGDGKTPEGLYRIDRR--NPNSDFHLSLGISYPNVN 98 Query: 131 D----KAHNRT-GADLMIHGE---------CASAGCYAMNNKQMQEIYAIVR 168 D KA ++ G D+ IHG+ + GC A+ N +M+EIYA+V+ Sbjct: 99 DYAAAKAVGKSAGGDIFIHGQKSPFRNDDPDWTWGCIAVTNPEMEEIYAMVQ 150 >gi|254436867|ref|ZP_05050361.1| hypothetical protein OA307_1737 [Octadecabacter antarcticus 307] gi|198252313|gb|EDY76627.1| hypothetical protein OA307_1737 [Octadecabacter antarcticus 307] Length = 163 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 40/180 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M NR A L C + + + T + + K Sbjct: 1 MMNRRTFTSAAALFALTACSNKFRVYNGP--------------------AVTSVVVQKGR 40 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + N +L++Y+ G K GD + PEG YYI NPNS+++L Sbjct: 41 RKMFLLHNN-----KVLEQYEFELGFAPTGHKKTEGDGRTPEGAYYIDRK--NPNSRFYL 93 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 SI I +PN+ D+A R G D+ IHG +AGC A+ +++M++IYA+V Sbjct: 94 SIGISYPNDADRARARAMGKSPGGDIFIHGTPRLSLNRDDWTAGCLAVTDREMEDIYAMV 153 >gi|225024431|ref|ZP_03713623.1| hypothetical protein EIKCOROL_01306 [Eikenella corrodens ATCC 23834] gi|224942812|gb|EEG24021.1| hypothetical protein EIKCOROL_01306 [Eikenella corrodens ATCC 23834] Length = 200 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 75/197 (38%), Gaps = 35/197 (17%) Query: 1 MTNRYNILLFALFIFLNG--------CHHSRSLIDKAEHP-LSENLIISMQKKRTSPFHP 51 M + + LF + L G + SL + LS +Q+ P Sbjct: 1 MNKKPLLALFGTILLLLGGYVFLRHSSNPPGSLPNTGNSAGLSPRQQSLLQQPALPPGSE 60 Query: 52 TV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 + + K E ++ + + LLK Y I G K GD + PEG Y I Sbjct: 61 IAKLVVRKAEREMDAYDAQGN----LLKTYPIALGFSPVGHKQFEGDGKTPEGRYTINDR 116 Query: 111 NLNPNSKYFLSINIGFPNEFDK----AHNR-TGADLMIHG--------------ECASAG 151 NP+S + ++ I +PN D+ A + G D+ IHG + G Sbjct: 117 --NPHSSHHKNLGISYPNAADRTHASAQGKNPGGDIKIHGLRNGLGLIGAQHLRRDWTHG 174 Query: 152 CYAMNNKQMQEIYAIVR 168 C A+ + ++ E+Y V+ Sbjct: 175 CIAVTDGEIDELYIHVK 191 >gi|90578351|ref|ZP_01234162.1| hypothetical protein VAS14_14909 [Vibrio angustum S14] gi|90441437|gb|EAS66617.1| hypothetical protein VAS14_14909 [Vibrio angustum S14] Length = 233 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 33/241 (13%) Query: 1 MTNRYNILLFALFIFL--------------NGCHHSRSLIDKAEHPLSENLIISMQKKRT 46 M + + L +F + G ++ + + + ++ Sbjct: 1 MFKKALLPLLVMFTAVTDVQAAYSYSTYPPAGTRTVDDVMKRYSPFVEPRIKRYFEQAGL 60 Query: 47 S-PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 S P + K E ++E+W ++ +K Y I SG GPK+ GD+Q PEG Y Sbjct: 61 SYPPKNIALFAMKEEMLVELWAEEK-GKWSYVKRYNIEKISGKKGPKLREGDKQVPEGIY 119 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQ 159 + + LNPNS++ LS+ + +PN FD+ + + G+++ IHG+ AS GC AM + Sbjct: 120 RV--SLLNPNSRFHLSMKLDYPNAFDRKYAKLEGRTSPGSNIFIHGKQASTGCLAMGDYS 177 Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNH 219 ++E++ + + +I++ P + + N FW + + E+ Sbjct: 178 IEELFLLAQ----RTGLDNIEVVISPHDPKKGKL---LASVNQPFWTQI--LYRNIEQQA 228 Query: 220 Q 220 + Sbjct: 229 R 229 >gi|85706916|ref|ZP_01038006.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217] gi|85668527|gb|EAQ23398.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217] Length = 166 Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 39/184 (21%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + ++ A L+ C + ++ + + K E Sbjct: 1 MKLKRRFVVMAGLCALSACGTNSKFRSYRGPEVT------------------RVIVNKGE 42 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + N LLK YK+ G K GD + PEG Y I NPNS + L Sbjct: 43 REMYLLHHN-----KLLKRYKVDLGFAPAGHKQFEGDGRTPEGEYVIDRR--NPNSSFHL 95 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166 S+ I +PNE D A+ G D+ IHGE +AGC ++ N++M+++YA+ Sbjct: 96 SLGISYPNEADIAYAEAMGETPGGDIFIHGEPNALAVLSRDWTAGCISVKNREMEDVYAM 155 Query: 167 VRDS 170 VRD Sbjct: 156 VRDG 159 >gi|187251137|ref|YP_001875619.1| hypothetical protein Emin_0727 [Elusimicrobium minutum Pei191] gi|186971297|gb|ACC98282.1| hypothetical protein Emin_0727 [Elusimicrobium minutum Pei191] Length = 189 Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 26/183 (14%) Query: 1 MTN-RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M R + FI L G + A PL++ +++K+ I I K Sbjct: 1 MRKERLIYIFIVTFILLCGVLFFALRGNAAGIPLTKEEQENLKKEIPENAVIDKIVILKE 60 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + I+E+ + LLK YKI G K + GD + PEG Y + NP+S+Y+ Sbjct: 61 KRIMEV-----SQKEELLKSYKISLGFEPKGHKEQQGDGKTPEGIYKVDGK--NPHSRYY 113 Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHG-------------ECASAGCYAMNNKQMQ 161 ++ + +PN+ D+A + G D+ IHG + GC A+ N ++ Sbjct: 114 KNLGVSYPNDKDRAAAKAKGINPGGDIKIHGIGKDYWHIKENILGDWTLGCIAVTNAEID 173 Query: 162 EIY 164 EIY Sbjct: 174 EIY 176 >gi|270160116|ref|ZP_06188772.1| Legionella secretion system protein A [Legionella longbeachae D-4968] gi|269988455|gb|EEZ94710.1| Legionella secretion system protein A [Legionella longbeachae D-4968] Length = 264 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 33/239 (13%) Query: 3 NRYNILL--------FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTV 53 R L+ +A+ LN + + + L + S P Sbjct: 33 KRVFALIMIVFSFNSYAMAPKLNWDQAVDRAVQRYGLRVEPQLKSYFSRAGVSYPPRELA 92 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + FK+E +E+W RN + + + +Y + +SG GPK+ D+Q PEG Y + N N Sbjct: 93 LLAFKSERKVELWARNSNQSWKHIHDYPLTGFSGRLGPKLRENDKQIPEGVYKLV--NFN 150 Query: 114 PNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIV 167 P S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ + Sbjct: 151 PFSSMHLSMMINYPNSFDRQKGYQDGRKQLGNNIFIHGKNLSVGCLAVGDLAIDQLFILA 210 Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF----WNMLKLGHDYFEKNHQEP 222 R ++I++ P N + +F W L + ++ + Sbjct: 211 R----RVGLNNIKVIIAP------NDLRKKKPSTSTFAQPRW--LPELYKQIAESLKPF 257 >gi|99082736|ref|YP_614890.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. TM1040] gi|99039016|gb|ABF65628.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. TM1040] Length = 162 Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 44/180 (24%) Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRN 69 + GC + P++ I + K + + Sbjct: 1 MLATLGAAGCSSGPQIRRYNGPPVTS------------------IVVNKGSRKMYLL--- 39 Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE 129 E +L EYK+ G K GD + PEG Y I NP S+++LS+ I +PN Sbjct: 40 --NESKVLTEYKVGLGFAPVGHKQVEGDGRTPEGTYLIDRR--NPRSQFYLSLGISYPNS 95 Query: 130 FDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDS 170 D+AH R G D+ IHGE +AGC A+ N +++EI+++V + Sbjct: 96 ADRAHARSLGASPGGDIFIHGEPNDRADRRRAARVRDWTAGCIAVTNDEIEEIWSMVNNG 155 >gi|56694959|ref|YP_165304.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3] gi|56676696|gb|AAV93362.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3] Length = 202 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 43/189 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R+ L A + L+ C S + P + I I K Sbjct: 31 MDRRHFGLGAAAALGLSACGSQDSKFRRYYGPAVTS-----------------IVINKGA 73 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +LKEYK+ G K GD + PEG Y I NPNS + L Sbjct: 74 RKMYLLNNE-----KVLKEYKVELGFAPAGHKQFEGDGKTPEGTYLIDRR--NPNSAFHL 126 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S+ I +PN D A+ + G ++ IHGE +AGC A+ N +++ Sbjct: 127 SLGISYPNSRDVAYAQAMGKKPGGEIFIHGEPNGLRDRKKAKKQPDWTAGCIAVKNDEIE 186 Query: 162 EIYAIVRDS 170 EIYA+VRD Sbjct: 187 EIYAMVRDG 195 >gi|149204465|ref|ZP_01881431.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. TM1035] gi|149141964|gb|EDM30013.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. TM1035] Length = 158 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 43/178 (24%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 + FL+GC + E T +R++K + +L + Sbjct: 1 MGGFAAFLSGCASKFRSYNGPEV--------------------TRLRMYKGQRLLVL--- 37 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 D +L+ Y I G K GD + PEG Y I NP+S + LSI I +PN Sbjct: 38 --DGADDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYEIDRR--NPDSLFHLSIGISYPN 93 Query: 129 EFDK----AHNR-TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDS 170 E D A + G D+ +HG +AGC A+ ++Q++EIYA+VRD Sbjct: 94 EADIAFAEAQGKSPGGDIFVHGGPRKGIDPMNVRDWTAGCIAVTDRQIEEIYAMVRDG 151 >gi|89074657|ref|ZP_01161122.1| hypothetical protein SKA34_07229 [Photobacterium sp. SKA34] gi|89049595|gb|EAR55155.1| hypothetical protein SKA34_07229 [Photobacterium sp. SKA34] Length = 233 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 33/238 (13%) Query: 1 MTNRYNILLFALFIFL--------------NGCHHSRSLIDKAEHPLSENLIISMQKKRT 46 M + + L +F + G ++ + + + Sbjct: 1 MFKKALLPLLVMFTAVTDVQAAYSYSTYPPAGTRTVDDVMKHYSPFVEPRMKRYFEHAGL 60 Query: 47 S-PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 S P + K E +E+W ++ +K Y I SG GPK+ GD+Q PEG Y Sbjct: 61 SYPPQNIALFAMKEEMSVELWAEEK-GKWSYVKRYNIEKISGKKGPKLREGDKQVPEGIY 119 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQ 159 I + LNPNS++ LS+ + +PN FD+ + + G+++ IHG+ AS GC AM + Sbjct: 120 RI--SLLNPNSRFHLSMKLDYPNAFDRKYAKLEGRTFPGSNIFIHGKQASTGCLAMGDYS 177 Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEK 217 ++E++ + + +I++ P + + N FW + + E+ Sbjct: 178 IEELFLLAQ----RTGLDNIEVVISPHDPKKGKL---LASVNQPFWTQI--LYRNIEQ 226 >gi|85707004|ref|ZP_01038093.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217] gi|85668445|gb|EAQ23317.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217] Length = 158 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 43/178 (24%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 + L FL+GC + E T +R++K + L + Sbjct: 1 MGGLAAFLSGCASKFRSYNGPEV--------------------TRLRMYKAQRFLVL--- 37 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 D +L+ Y I G K GD + PEG Y I NP S + LSI I +PN Sbjct: 38 --DGVDDVLRTYPIGLGFAPEGHKQFEGDGRTPEGSYVIDRR--NPESLFHLSIGISYPN 93 Query: 129 EFD----KAHNR-TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDS 170 D +A + G D+ IHG +AGC A+ ++Q++EIYA+VRD Sbjct: 94 AADIAFAQAQGKSPGGDIFIHGGPRKGIDPMNVRDWTAGCIAVTDRQIEEIYAMVRDG 151 >gi|289165107|ref|YP_003455245.1| Legionella secretion system protein A [Legionella longbeachae NSW150] gi|288858280|emb|CBJ12148.1| Legionella secretion system protein A [Legionella longbeachae NSW150] Length = 243 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 33/239 (13%) Query: 3 NRYNILL--------FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTV 53 R L+ +A+ LN + + + L + S P Sbjct: 12 KRVFALIMIVFSFNSYAMAPKLNWDQAVDRAVQRYGLRVEPQLKSYFSRAGVSYPPRELA 71 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + FK+E +E+W RN + + + +Y + +SG GPK+ D+Q PEG Y + N N Sbjct: 72 LLAFKSERKVELWARNSNQSWKHIHDYPLTGFSGRLGPKLRENDKQIPEGVYKLV--NFN 129 Query: 114 PNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIV 167 P S LS+ I +PN FD+ G ++ IHG+ S GC A+ + + +++ + Sbjct: 130 PFSSMHLSMMINYPNSFDRQKGYQDGRKQLGNNIFIHGKNLSVGCLAVGDLAIDQLFILA 189 Query: 168 RDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF----WNMLKLGHDYFEKNHQEP 222 R ++I++ P N + +F W L + ++ + Sbjct: 190 R----RVGLNNIKVIIAP------NDLRKKKPSTSTFAQPRW--LPELYKQIAESLKPF 236 >gi|167032069|ref|YP_001667300.1| hypothetical protein PputGB1_1056 [Pseudomonas putida GB-1] gi|166858557|gb|ABY96964.1| conserved hypothetical protein [Pseudomonas putida GB-1] Length = 184 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 29/187 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + LF L + + P+ S ++ P V+ I K+E Sbjct: 1 MRWLLALFCLCV--TSVSQAAFTETIIRKPVPAAQTPSPSQQAMQPLIDKVLVI-KSERR 57 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++ Sbjct: 58 LQLISRG-----EPLKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWR--KQSDRFNLAM 110 Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163 +I +PN D A G+ +MIHG + GC AM N+ MQE+ Sbjct: 111 HINYPNISDAARATREGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170 Query: 164 YAIVRDS 170 + +VRD Sbjct: 171 WELVRDG 177 >gi|84514894|ref|ZP_01002257.1| ErfK/YbiS/YcfS/YnhG family protein [Loktanella vestfoldensis SKA53] gi|84511053|gb|EAQ07507.1| ErfK/YbiS/YcfS/YnhG family protein [Loktanella vestfoldensis SKA53] Length = 160 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 20/134 (14%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I++FK + +++ + LL++Y + K + GD + PEG Y I N Sbjct: 31 IQVFKEQRKMQLLHND-----KLLRQYDVALGFNPRDHKQQEGDGRTPEGAYVINRQ--N 83 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------ASAGCYAMNNKQM 160 PNS++ LSI I +PN D A R G D+ IHG + GC A++N +M Sbjct: 84 PNSRFHLSIGISYPNAVDVARARAMGVHPGGDIFIHGTPAPWIGMPDWTWGCIAVSNTEM 143 Query: 161 QEIYAIVRDSLRGN 174 E+Y++V+ + Sbjct: 144 DEVYSMVQLGTKIF 157 >gi|116626039|ref|YP_828195.1| ErfK/YbiS/YcfS/YnhG [Candidatus Solibacter usitatus Ellin6076] gi|116229201|gb|ABJ87910.1| ErfK/YbiS/YcfS/YnhG [Candidatus Solibacter usitatus Ellin6076] Length = 140 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 20/130 (15%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I ++K+ + + + +L+ Y+I G K + GD + PEG Y I N Sbjct: 11 IVVYKSRREMLLLRGES-----ILRSYRIALGRDPIGHKFQEGDGRTPEGCYTIDRR--N 63 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------ECASAGCYAMNNKQM 160 P SKY LS++I +P D R G D+MIHG + GC A++N++M Sbjct: 64 PKSKYHLSLHISYPEARDLDRAREAGVDPGGDIMIHGLKDGQPDPSDWTQGCIAVSNEEM 123 Query: 161 QEIYAIVRDS 170 EI+++V D Sbjct: 124 DEIWSLVPDG 133 >gi|269104655|ref|ZP_06157351.1| hypothetical protein VDA_000812 [Photobacterium damselae subsp. damselae CIP 102761] gi|268161295|gb|EEZ39792.1| hypothetical protein VDA_000812 [Photobacterium damselae subsp. damselae CIP 102761] Length = 239 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 14/191 (7%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEIWKRNVDAEYVL 76 G +I + + + L I + S P + KNE +E+W + L Sbjct: 34 GSRTVDDVIKRYQPIVEPRLKIDFARAEVSYPPKKIALFAMKNEQKMELWAE-EGDTWHL 92 Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN- 135 +K Y I SG GPK GD+Q PEG Y + + LNPNS+Y LS+ + +PN+FD + Sbjct: 93 IKNYPITKLSGVMGPKKREGDKQIPEGIYQVEF--LNPNSQYHLSMKLNYPNDFDLKYAK 150 Query: 136 -----RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190 + G ++ IHG+ +S GC A+ + ++E++ + + +I + P+ + Sbjct: 151 LEGRTKPGTNIFIHGKESSVGCLAIGDVAIEELFVLA----KNTGIDNIDVVISPYDPRT 206 Query: 191 KNMQLYQNNPN 201 + + + P Sbjct: 207 RTLVPTLSEPY 217 >gi|255261385|ref|ZP_05340727.1| ErfK/YbiS/YcfS/YnhG [Thalassiobium sp. R2A62] gi|255103720|gb|EET46394.1| ErfK/YbiS/YcfS/YnhG [Thalassiobium sp. R2A62] Length = 175 Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 41/184 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + +F LF L GC + E T I ++K Sbjct: 12 MRLFRVLSVFLLFFVLVGCGSKFKTYNGPEV--------------------TRIAVYKEA 51 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + N +L++Y G K GD + PEG Y+I NPNS++ L Sbjct: 52 RTMYLMHNN-----EVLEKYDFALGFEPVGRKQVEGDGKTPEGNYFIDRR--NPNSRFHL 104 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166 S+ I +PN D R G D+ IHG + GC A+ +++M++IYA+ Sbjct: 105 SLGISYPNANDVEVARALGMPPGGDIFIHGTPKRFRNSDDDWTWGCIAVKDREMEQIYAM 164 Query: 167 VRDS 170 V++ Sbjct: 165 VKNG 168 >gi|163745086|ref|ZP_02152446.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45] gi|161381904|gb|EDQ06313.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45] Length = 160 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 40/178 (22%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 IL + L C S+ + P + + K++ + + Sbjct: 2 ILGGTAMVALGACSSSK--FKRYNGPEVT-----------------YVVVNKSQRRMMLL 42 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 N +L++Y I G K GD + PEG Y I NPNS++ LSI I + Sbjct: 43 HHN-----RVLEDYPIKLGFAPVGHKTVEGDGRTPEGLYRIDRR--NPNSRFHLSIGIDY 95 Query: 127 PNEFDKAHNR-----TGADLMIHGE---------CASAGCYAMNNKQMQEIYAIVRDS 170 PN+ D + R G D+ IHG+ + GC A+ NK+++++YA+VRD Sbjct: 96 PNQLDVEYARSMGKSPGGDIFIHGQKDPRQKEKNDWTWGCIAVTNKEIEDVYAMVRDG 153 >gi|254496466|ref|ZP_05109343.1| secretion system protein A [Legionella drancourtii LLAP12] gi|254354322|gb|EET12980.1| secretion system protein A [Legionella drancourtii LLAP12] Length = 243 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 32/240 (13%) Query: 1 MTN-RYNILLF------ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPT 52 M I++F A+ LN I + + L +K S P Sbjct: 11 MKRFITFIIMFLSLNSYAMTHKLNWDQAVDRAIKRYGLRVEPQLKSYFKKAGVSYPPRNI 70 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + FK+E +E+W +N D + + Y + +SG GPK+ D+Q PEG Y + N Sbjct: 71 ALLAFKSERKVELWAKNQDQGWKHVHNYPLTGFSGRLGPKLRENDKQIPEGVYKLV--NF 128 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAI 166 NP S LS+ I +PN +D+ G ++ IHG+ S GC A+ + + +++ + Sbjct: 129 NPFSSMHLSMMINYPNNYDRQKGYQDGRRNLGNNIFIHGKNLSVGCLAIGDLAIDQLFIL 188 Query: 167 VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF----WNMLKLGHDYFEKNHQEP 222 R HIQ+ P N + +F W L + ++ + Sbjct: 189 AR----RVGLEHIQVIIAP------NDLRNKKPSTSTFAQPRW--LPELYKQIAESLKPF 236 >gi|104783244|ref|YP_609742.1| hypothetical protein PSEEN4271 [Pseudomonas entomophila L48] gi|95112231|emb|CAK16958.1| conserved hypothetical protein; putative signal peptide [Pseudomonas entomophila L48] Length = 185 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 30/188 (15%) Query: 3 NRYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R+ + LF L + ++ + ++I K + + + + + K+E Sbjct: 1 MRWLLALFCLSVASVSQAAFTETIIRKPASTQQPASLAMVAPQGPQIDK---VLVLKSER 57 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L++ R LK Y+I G K GD++ PEG Y++ W + + +Y L+ Sbjct: 58 RLQLISRG-----EPLKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWRKV--SDRYNLA 110 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A R G+ +MIHG + GC AM N M+E Sbjct: 111 MHISYPNITDAAKARRDGVAAGSMIMIHGTPINEEYPEWYFHTLDWTEGCIAMRNDDMRE 170 Query: 163 IYAIVRDS 170 ++++V+D Sbjct: 171 VWSMVKDG 178 >gi|26988184|ref|NP_743609.1| hypothetical protein PP_1451 [Pseudomonas putida KT2440] gi|24982920|gb|AAN67073.1|AE016336_5 conserved hypothetical protein [Pseudomonas putida KT2440] gi|313500324|gb|ADR61690.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 184 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 29/187 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + LF L + + P S ++ P V+ I K+E Sbjct: 1 MRWLLALFCLCV--TSVSQAAFTETIIRKPAPAAQTPSPSQQAMQPLIDKVLVI-KSERR 57 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++ Sbjct: 58 LQLISRG-----EPLKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWR--KQSDRFNLAM 110 Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163 +I +PN D A G+ +MIHG + GC AM N+ MQE+ Sbjct: 111 HINYPNISDAARATRAGVNAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170 Query: 164 YAIVRDS 170 + +VRD Sbjct: 171 WDLVRDG 177 >gi|146278672|ref|YP_001168831.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC 17025] gi|145556913|gb|ABP71526.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC 17025] Length = 164 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 78/199 (39%), Gaps = 49/199 (24%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L+ L + L C S+ I K E P + +++ K E Sbjct: 1 MKFLKITLII-LALGLTACGDSK--IRKYEGPPVTS-----------------VQVHKAE 40 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + +L++Y I G K GD + PEG Y+I NP S Y L Sbjct: 41 RKMYLLSGA-----KVLRQYDIGLGFKPTGHKQYEGDGRTPEGVYFIDRQ--NPRSSYHL 93 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHG---------ECASAGCYAMNNKQMQEIYAI 166 S+ I +PN D+ + G D+ IHG +AGC A+ +++++EIYA+ Sbjct: 94 SLGISYPNTADQKMAFLEGKKPGGDIFIHGRGKYNGPNKRDWTAGCIAVTDQEVEEIYAM 153 Query: 167 VRDSLRGNMQSHIQIQAFP 185 VR I P Sbjct: 154 VRVGT--------PIYILP 164 >gi|302185720|ref|ZP_07262393.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae 642] Length = 187 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+ Sbjct: 1 MRWLLALFCMSFVPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G K++ GD++ PEGFY+I W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +M+HG + GC A+ N M+ Sbjct: 112 SMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|148549476|ref|YP_001269578.1| hypothetical protein Pput_4270 [Pseudomonas putida F1] gi|148513534|gb|ABQ80394.1| conserved hypothetical protein [Pseudomonas putida F1] Length = 184 Score = 148 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 29/187 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + LF L + + P S ++ P V+ I K+E Sbjct: 1 MRWLLALFCLCV--TSVSQAAFTETIIRKPAPAAQTPSPSQQAMQPLIDKVLVI-KSERR 57 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++ Sbjct: 58 LQLISRG-----EPLKTYRISLGKQPKGAKEREGDKKTPEGLYWLDWR--KQSDRFNLAM 110 Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163 +I +PN D A G+ +MIHG + GC AM N+ MQE+ Sbjct: 111 HINYPNISDAARATRAGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170 Query: 164 YAIVRDS 170 + +VRD Sbjct: 171 WDLVRDG 177 >gi|325273813|ref|ZP_08140000.1| hypothetical protein G1E_11950 [Pseudomonas sp. TJI-51] gi|324101053|gb|EGB98712.1| hypothetical protein G1E_11950 [Pseudomonas sp. TJI-51] Length = 184 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 29/187 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + +F L + + P+ S ++ P V+ I K+E Sbjct: 1 MRWLLAIFCLCV--TSVSQAAFTETIIRKPVQAAPSPSPSQQAMQPLIDKVLVI-KSERR 57 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L++ R LK Y+I G K GD++ PEG Y++ W + ++ L++ Sbjct: 58 LQLISRG-----EPLKTYRISLGKQPKGAKQREGDKKTPEGLYWLDWR--KQSDRFNLAM 110 Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163 +I +PN D A G+ +MIHG + GC AM N+ MQE+ Sbjct: 111 HINYPNSNDAARATREGVSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNRDMQEV 170 Query: 164 YAIVRDS 170 + +VRD Sbjct: 171 WNLVRDG 177 >gi|77464780|ref|YP_354284.1| hypothetical protein RSP_1201 [Rhodobacter sphaeroides 2.4.1] gi|221640697|ref|YP_002526959.1| hypothetical protein RSKD131_2598 [Rhodobacter sphaeroides KD131] gi|77389198|gb|ABA80383.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] gi|221161478|gb|ACM02458.1| Hypothetical Protein RSKD131_2598 [Rhodobacter sphaeroides KD131] Length = 166 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 49/200 (24%) Query: 1 MTNRYN-ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M ++ I L L + L GC S+ I K + P + +++ K Sbjct: 1 MNMKFLKITLIVLALGLAGCGDSK--IRKYDGPPVTS-----------------VQVHKA 41 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + + + + +L++Y + G K GD + PEG Y+I NP S Y Sbjct: 42 DRKMYLLNGS-----KVLRQYDVGLGFKPTGHKQYEGDGRTPEGVYFIDRQ--NPRSTYH 94 Query: 120 LSINIGFPNEFDKAHN-----RTGADLMIHG---------ECASAGCYAMNNKQMQEIYA 165 LS+ I +PN D+ + G D+ IHG +AGC A+ + +++E+Y+ Sbjct: 95 LSLGISYPNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTAGCIAITDDEVEEVYS 154 Query: 166 IVRDSLRGNMQSHIQIQAFP 185 +VR I P Sbjct: 155 MVRLGT--------PIYILP 166 >gi|254464093|ref|ZP_05077504.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I] gi|206685001|gb|EDZ45483.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I] Length = 135 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 26/134 (19%) Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 I K+ L + + +L+EY + G K GD + PEG Y I NPN Sbjct: 2 INKSSRKLYLLHKE-----EVLREYDVDLGFAPQGHKQFEGDGKTPEGTYVIDRR--NPN 54 Query: 116 SKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMN 156 S+Y LS+ I +PN D+A + G ++ IHG+ +AGC A++ Sbjct: 55 SRYHLSVGISYPNVEDRATAEAAGKKPGGEIFIHGQPNNPKERKRAARVSDWTAGCIAVS 114 Query: 157 NKQMQEIYAIVRDS 170 N ++EIYA+V+D Sbjct: 115 NDDIEEIYAMVQDG 128 >gi|120553064|ref|YP_957415.1| hypothetical protein Maqu_0121 [Marinobacter aquaeolei VT8] gi|120322913|gb|ABM17228.1| conserved hypothetical protein [Marinobacter aquaeolei VT8] Length = 185 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 30/189 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R + + + L + L+ +A+ + + + + + K E Sbjct: 1 MIVRVLLTIALIASPLLA--SASELLARADTRMMPSAPEPALMEGLLEITQVL--VNKGE 56 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + + +++Y+I G K+ GDE+ PEG Y + W N +S ++ Sbjct: 57 RRLYLLSGD-----EPVRQYRISLGDNPVGHKLYEGDERTPEGDYVLDWR--NASSDFYK 109 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 SI+I +P+ D+ G +MIHG + GC A++N+ M Sbjct: 110 SIHISYPSPRDRELAEAWGLDPGGSIMIHGLPNNAGDMAFAYTGLDWTNGCIAVSNEAMD 169 Query: 162 EIYAIVRDS 170 EI+ +V++ Sbjct: 170 EIWQLVQNG 178 >gi|126724610|ref|ZP_01740453.1| ErfK/YbiS/YcfS/YnhG-like protein [Rhodobacterales bacterium HTCC2150] gi|126705774|gb|EBA04864.1| ErfK/YbiS/YcfS/YnhG-like protein [Rhodobacterales bacterium HTCC2150] Length = 166 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 31/160 (19%) Query: 42 QKKRTSPFHPTVIR--IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99 K PTV R +FK L I+ +L +++ G K GD + Sbjct: 22 SSKFKRYHGPTVTRLAVFKESRKLYIFHNET-----VLAAHEVELGFAPVGHKEVEGDGK 76 Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIH---------G 145 PEG Y+I NPNS + LS+ I +PN+ D+ G D+ IH G Sbjct: 77 TPEGRYFIDRR--NPNSSFHLSLGISYPNDADRKAAAELGESPGGDIFIHGQKSLTNRGG 134 Query: 146 ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + +AGC ++ N +M++IYA+V + + I +P Sbjct: 135 DDWTAGCISVTNDEMEDIYAMVPNG--------VPIDIYP 166 >gi|149912912|ref|ZP_01901446.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. AzwK-3b] gi|149813318|gb|EDM73144.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. AzwK-3b] Length = 165 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 21/131 (16%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + K E + + +L+ + I G K GD + PEG Y+I N Sbjct: 35 IIVNKGEREMHLLHHG-----RVLRSFDIHLGFAPEGHKQVEGDGKTPEGEYFIDRR--N 87 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC---------ASAGCYAMNNKQ 159 PNS + LSI I +PNE D A G D+ IHG + GC A+ +K+ Sbjct: 88 PNSSFHLSIGISYPNEMDVARAASMGMSPGGDIFIHGAPQTVRRHRPDWTEGCIAVTDKE 147 Query: 160 MQEIYAIVRDS 170 M+ IYA+V+D Sbjct: 148 MEIIYAMVKDG 158 >gi|289677908|ref|ZP_06498798.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae FF5] gi|330969039|gb|EGH69105.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aceris str. M302273PT] Length = 187 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+ Sbjct: 1 MRWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G K++ GD++ PEGFY+I W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +M+HG + GC A+ N M+ Sbjct: 112 SMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|66044519|ref|YP_234360.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] gi|63255226|gb|AAY36322.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a] Length = 187 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+ Sbjct: 1 MRWLLALFCMSFMPLSQAALTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G K++ GD++ PEGFY+I W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWIDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +M+HG + GC A+ N M+ Sbjct: 112 SMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|85859401|ref|YP_461603.1| protein ERFK [Syntrophus aciditrophicus SB] gi|85722492|gb|ABC77435.1| protein ERFK [Syntrophus aciditrophicus SB] Length = 314 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 36/181 (19%) Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83 + + K L L + P +I K + L + R+ +LK YKI Sbjct: 151 AALRKNIEALERELKNRISAIPNMPADRILIE--KRKRRLTLIARD-----KVLKMYKIA 203 Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TG 138 GPKI GD + PEG Y I N +S+Y L+++I +PN+ D+ R G Sbjct: 204 LGGNPDGPKIRQGDNKTPEGTYIIDSR--NRDSRYHLALHISYPNDEDRKRARRLGVSPG 261 Query: 139 ADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 ++MIHG + GC A+ N++++EI +VR+ + Sbjct: 262 GNIMIHGLRNGFSWIGDFHTANDWTKGCIAVTNEEIEEIARLVRNGTI--------VHIL 313 Query: 185 P 185 P Sbjct: 314 P 314 >gi|170723329|ref|YP_001751017.1| hypothetical protein PputW619_4168 [Pseudomonas putida W619] gi|169761332|gb|ACA74648.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 184 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 31/188 (16%) Query: 3 NRYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R+ LF L + ++ + ++I K + PL + + + K+E Sbjct: 1 MRWLFALFCLCVTSVSQAAFTETIIRKPQPPLPAQSQSQAAMQPLIDK----VLVIKSER 56 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L++ R LK Y+I G K GD++ PEG Y++ W + ++ LS Sbjct: 57 RLQLISRG-----EPLKTYRISLGKQPKGAKQREGDKKTPEGLYWLDWR--KQSDRFNLS 109 Query: 122 INIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A G+ +MIHG + GC AM N M+E Sbjct: 110 MHITYPNISDAARATREGWSAGSMIMIHGTPINDEYPEWYFHTLDWTDGCIAMRNSDMRE 169 Query: 163 IYAIVRDS 170 ++ +V D Sbjct: 170 VWDLVPDG 177 >gi|167947682|ref|ZP_02534756.1| hypothetical protein Epers_14537 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 249 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 39/238 (16%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF----- 57 R+ ++L + + +L A PLS ++ +++ P + R F Sbjct: 1 MRFAVILLCFTLI------AGTLPVAANEPLSPEVVQVLERL-VPRLEPQLRRRFEQAGV 53 Query: 58 ------------KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 K E +E+W + + + +Y++ A SG GPK+ GD Q PEGFY Sbjct: 54 EYPPARLQLISLKQEQQIEVWAADA-GPWRHIHDYQVLAASGVAGPKLREGDRQVPEGFY 112 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFD----KAHNR--TGADLMIHGECASAGCYAMNNKQ 159 I LNP+S++ LSI + FPN FD A R G+++ IHG S GC A+ ++ Sbjct: 113 QIEA--LNPHSRFHLSIKLNFPNSFDWLNAHAEGRRQPGSNIFIHGSAWSVGCLAIGDQA 170 Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ-LYQNNPN-YSFWNMLKLGHDYF 215 ++E++ +V + Q + P+ + Q P ++ L+ G F Sbjct: 171 VEELFLLV----ARSWQEPASVMILPYDFRCQAPQLPAAARPWVAELYSYLQQGVARF 224 >gi|110677799|ref|YP_680806.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh 114] gi|109453915|gb|ABG30120.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh 114] Length = 153 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 21/130 (16%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + + K + + L+ Y I G K GD + PEG Y I Sbjct: 22 FVVVNKGARRMHLLHNETA-----LRSYDIHLGFAPVGHKQFEGDGKTPEGLYRIDRR-- 74 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE---------CASAGCYAMNNK 158 NPNS + LS+ I +PN D A + G D+ IHG+ + GC A+ N Sbjct: 75 NPNSDFHLSLGISYPNVNDYAAAKAVGKSPGGDIFIHGQKSPFRKDEPDWTWGCIAVTNP 134 Query: 159 QMQEIYAIVR 168 +++EIYA+V+ Sbjct: 135 EIEEIYAMVQ 144 >gi|85373228|ref|YP_457290.1| hypothetical protein ELI_02005 [Erythrobacter litoralis HTCC2594] gi|84786311|gb|ABC62493.1| hypothetical protein ELI_02005 [Erythrobacter litoralis HTCC2594] Length = 169 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 43/187 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 + R L+ L F+ C + + P+ + + K++ Sbjct: 2 IRFRIPALMLGLA-FVASCAPTPQPVSVEAPPVD------------------FLLVDKSD 42 Query: 61 NILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 L +++ + ++ Y + G K GDE+ PEG Y I NPNS Y+ Sbjct: 43 RTLALYRDGAE-----VRRYTGLQFGDAPLGHKRFEGDERTPEGRYTIDTR--NPNSAYY 95 Query: 120 LSINIGFPNEFDKAHN-----RTGADLMIHGEC-----------ASAGCYAMNNKQMQEI 163 LS+ + +PN D+A+ G D+ +HG+ + GC A N +M E+ Sbjct: 96 LSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLPAGRMPGDWTDGCIAFTNAEMDEL 155 Query: 164 YAIVRDS 170 + +VRD Sbjct: 156 WRLVRDG 162 >gi|53805015|ref|YP_113152.1| hypothetical protein MCA0637 [Methylococcus capsulatus str. Bath] gi|53758776|gb|AAU93067.1| conserved domain protein [Methylococcus capsulatus str. Bath] Length = 292 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 14/172 (8%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 ++ + L ++ + P V+ K E LE+W R+ ++Y L++ Sbjct: 77 TVSDVLRDFGPYSVQKLKPYFERAGVAFPPREVVLVGLKQEKKLELWARD-GSDYRLIRH 135 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN---- 135 Y I A SG+ GPK+ GD+Q PEG Y I LNPNS Y LS+ + +PN+FD H Sbjct: 136 YDIQAASGSAGPKLRQGDKQVPEGVYRIVG--LNPNSNYHLSMKLNYPNDFDLYHAQLEG 193 Query: 136 --RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + G+D+ IHG SAGC AM ++ ++E++ + + ++++ P Sbjct: 194 RTQPGSDIFIHGRAVSAGCLAMGDEAIEELFVLTAQ----VGKENVKVVIAP 241 >gi|83952906|ref|ZP_00961635.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM] gi|83835697|gb|EAP74997.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM] Length = 158 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 43/178 (24%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 + L FL+GC E T +R++K + +L + Sbjct: 1 MGGLAAFLSGCASKFRSYGGPEV--------------------TRVRLYKGQRLLVL--- 37 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 D +L+ Y + G K GD + PEG Y + NP S Y LS+ I +PN Sbjct: 38 --DGADRVLQTYPVGLGFAPEGHKQFEGDGRTPEGAYVVDKR--NPESTYHLSVGISYPN 93 Query: 129 EFDKAHNR-----TGADLMIHGEC-----------ASAGCYAMNNKQMQEIYAIVRDS 170 E D A G D+ IHG +AGC A+ ++Q+++IYA+V+D Sbjct: 94 EADIAFAEAQGLSPGGDIFIHGGPRPGIDPTDVRDWTAGCIAVTDRQIEDIYAMVKDG 151 >gi|330895915|gb|EGH28200.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. japonica str. M301072PT] gi|330936942|gb|EGH41053.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. pisi str. 1704B] gi|330975932|gb|EGH75998.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 187 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+ Sbjct: 1 MRWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +M+HG + GC A+ N M+ Sbjct: 112 SMHISYPNVSDSARARSEGVKPGSMIMLHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|222053244|ref|YP_002535606.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] gi|221562533|gb|ACM18505.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] Length = 323 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 26/153 (16%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 L + I I K + L ++ + +LK Y+I GPK G Sbjct: 171 LEQKISALTIQKVTADRILIEKKQRRLTLFSKG-----EVLKTYRIALGGNPDGPKERQG 225 Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG------ 145 D + PEG Y+I N +S+Y L+++I +PNE DK + G ++MIHG Sbjct: 226 DNKTPEGTYFIDSR--NRDSRYHLALHISYPNERDKRRAKELGVAPGGNIMIHGLKNGFS 283 Query: 146 --------ECASAGCYAMNNKQMQEIYAIVRDS 170 + GC A+ ++++ EI V + Sbjct: 284 YVGDLHTKADWTKGCIAVTDEEIAEIAKAVPNG 316 >gi|148264213|ref|YP_001230919.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4] gi|146397713|gb|ABQ26346.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4] Length = 337 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K E L + + +LK YKI GPK GD + PEG Y+I N Sbjct: 202 ILIEKKERRLMLISKG-----EVLKTYKIALGGNPNGPKERQGDNKTPEGTYFIDSR--N 254 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------------ECASAGCYA 154 +S Y LS++I +PNE DK + TG ++MIHG + GC A Sbjct: 255 KDSHYHLSLHISYPNERDKKRAKELGVSTGGNIMIHGIKNGFSWVGDFHTEVDWTKGCIA 314 Query: 155 MNNKQMQEIYAIVRDS 170 + +++++EI + + Sbjct: 315 VTDEEIEEIAKLAPNG 330 >gi|90411123|ref|ZP_01219136.1| hypothetical protein P3TCK_06142 [Photobacterium profundum 3TCK] gi|90327969|gb|EAS44290.1| hypothetical protein P3TCK_06142 [Photobacterium profundum 3TCK] Length = 238 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 19/202 (9%) Query: 23 RSLIDKAEHPLSENLIISMQKKRT-SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81 +I + L + + ++ P + K E +E+W ++ +V +K Y Sbjct: 42 GDVIKRYSPILEPRISLMFEQVGVQYPPEQVALFALKEEMQVELWAKD-GEAWVYIKRYD 100 Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA------HN 135 I SG GPK+ GD Q PEG Y + LNPNSKY LS+ + +PNEFD N Sbjct: 101 IAKISGKSGPKLREGDHQVPEGIYQV--IGLNPNSKYHLSMQLNYPNEFDLKYAQLEKRN 158 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQL 195 R GA++ IHG+ S GC AM + ++E++ +V + ++Q+ P + Sbjct: 159 RPGANIFIHGKAKSVGCLAMGDIAIEELFLLVERAKI----QNVQVVISPSDPRKGPLVP 214 Query: 196 YQNNPNYSFWNMLKLGHDYFEK 217 P FW + EK Sbjct: 215 AYGQP---FWVT--QLYRDIEK 231 >gi|330872830|gb|EGH06979.1| hypothetical protein PSYMP_01409 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330968074|gb|EGH68334.1| hypothetical protein PSYAC_26222 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 187 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF + FI L+ +++++ K +E + N +I+ + + + + K+ Sbjct: 1 MRWLLALFCMSFIPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y++ G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC A+ N M+ Sbjct: 112 SMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|315267942|gb|ADT94795.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS678] Length = 170 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 34/172 (19%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 ++ ++S + ++ I K+E+ + + + +LK+Y+I G K Sbjct: 14 VTIAALVSPVLHASGMGKVDLVVITKSESSMALLRDG-----KILKQYRIAMGDLPAGHK 68 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE- 146 ++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK R G +MIHG+ Sbjct: 69 LKEGDQRTPQGRYTLDYK--KPDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQN 126 Query: 147 -------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ +V + I+ +P Sbjct: 127 PKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDEGT--------PIEIWP 170 >gi|42522152|ref|NP_967532.1| hypothetical protein Bd0553 [Bdellovibrio bacteriovorus HD100] gi|39574683|emb|CAE78525.1| unnamed protein product [Bdellovibrio bacteriovorus HD100] Length = 220 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 36/198 (18%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT-------- 52 M L+ + L S++ ++ I + + Sbjct: 17 MKKLIFPLIALTLVSLQSFAGSKATDRSYKYCDDMTQIDKLLDRSRESVERIQREGLNIE 76 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I + K++ L + + LL+ Y + G K GD + PEG Y I + Sbjct: 77 RIVVSKDKRQLYLVSGDT-----LLRTYTVAFGWNFIGHKQFEGDGKTPEGIYSIDYK-- 129 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----------------ASAG 151 NP S++ S+++ +PN+ D A+ + G D+MIHG + G Sbjct: 130 NPKSQFTKSLHVDYPNKADIAYAKSQGRSPGGDIMIHGLPSNPQKYERISKIHPYDWTLG 189 Query: 152 CYAMNNKQMQEIYAIVRD 169 C A+ NK+++EIYA+V++ Sbjct: 190 CIAVTNKEIEEIYALVKE 207 >gi|298488264|ref|ZP_07006297.1| lipoprotein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157203|gb|EFH98290.1| lipoprotein, putative [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 187 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ F + F+ L+ +++++ K +E + N +I+ + + P + + K+ Sbjct: 1 MRWLFAFFCMSFVPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSV 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC A+ N M+ Sbjct: 112 SMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +VRD Sbjct: 172 EIWDLVRDG 180 >gi|160875753|ref|YP_001555069.1| hypothetical protein Sbal195_2641 [Shewanella baltica OS195] gi|160861275|gb|ABX49809.1| conserved hypothetical protein [Shewanella baltica OS195] Length = 188 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 34/172 (19%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 ++ ++S + ++ I K+E+ + + + +LK+Y+I G K Sbjct: 32 VTIAALVSPVLHASGMGKVDLVVITKSESSMALLRDG-----KILKQYRIAMGDLPAGHK 86 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE- 146 ++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK R G +MIHG+ Sbjct: 87 LKEGDQRTPQGRYTLDYK--KPDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQN 144 Query: 147 -------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ +V + I+ +P Sbjct: 145 PKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDEGT--------PIEIWP 188 >gi|118579010|ref|YP_900260.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM 2379] gi|118501720|gb|ABK98202.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM 2379] Length = 334 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 26/134 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K + L ++ RN LK Y+I GPK GD + PEG Y I N Sbjct: 199 ILIEKGDRRLTLFSRNEA-----LKSYRIALGGAPSGPKEREGDNKTPEGAYVIDSK--N 251 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------------ECASAGCYA 154 NS+Y LS++I +PNE DK + G D+MIHG + GC A Sbjct: 252 GNSQYHLSLHISYPNERDKKRAQELGVSPGGDIMIHGIKNGFSWVGDSQADADWTRGCVA 311 Query: 155 MNNKQMQEIYAIVR 168 +++++++EIY +V+ Sbjct: 312 VSDEEIEEIYKLVQ 325 >gi|330950757|gb|EGH51017.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae Cit 7] Length = 187 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF + F+ L+ +++++ K +E + N +I+ + + P + + K+ Sbjct: 1 MRWLLALFCMSFMPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSV 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC A+ N M+ Sbjct: 112 SMHISYPNISDSARARSAGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|237800073|ref|ZP_04588534.1| hypothetical protein POR16_14647 [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806402|ref|ZP_04593106.1| hypothetical protein POR16_38084 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022928|gb|EGI02985.1| hypothetical protein POR16_14647 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027515|gb|EGI07570.1| hypothetical protein POR16_38084 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 187 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + F + F+ L+ +++++ K +E + N +I+ + + + + K+ Sbjct: 1 MRWLLAFFCMSFLPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISDGEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC AM N M+ Sbjct: 112 SMHISYPNITDSARARNEGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIAMKNNDMR 171 Query: 162 EIYAIVRDS 170 E++ +V+D Sbjct: 172 EVWDLVKDG 180 >gi|163747598|ref|ZP_02154946.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45] gi|161379123|gb|EDQ03544.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45] Length = 157 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 42/177 (23%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 + L + L GC D T +++FK++ L ++ Sbjct: 1 MGGLALGLAGCASKFRTYDGP--------------------AVTRLQMFKSDRNLFLFNN 40 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 +LK Y+I GPK GD + PEG Y + NP+S + LSI I +PN Sbjct: 41 TS-----VLKAYRIDLGFAAEGPKQFEGDGKTPEGTYTVDRR--NPDSLFHLSIGISYPN 93 Query: 129 EFDKAHN-----RTGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVRDS 170 E D A+ G D+ IHG +AGC A++++++++IYA+VRD Sbjct: 94 EADIAYAAAQGQEPGGDIFIHGGPRPGIDAIKPDWTAGCIAVSDREIEDIYAMVRDG 150 >gi|85859827|ref|YP_462029.1| hypothetical protein SYN_00443 [Syntrophus aciditrophicus SB] gi|85722918|gb|ABC77861.1| hypothetical membrane protein [Syntrophus aciditrophicus SB] Length = 313 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 18/200 (9%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLK 78 +I K + +K + + K E LE+W R D +V ++ Sbjct: 50 PSVAGVIRKIGPRAEARIKPFFEKAGLPYPSRRLAFVVLKEEKKLEVWTR-YDGNWVHVR 108 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT- 137 Y I A SG+ GPK + GD Q PEG Y I +LNP S++ LS+ I +PN +D R Sbjct: 109 TYDILAASGSRGPKRKKGDYQVPEGIYQIV--SLNPASRFHLSMKINYPNAYDLQMARNE 166 Query: 138 -----GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKN 192 G D+ IHG+ S GC AM NK ++E++ +V ++++ P + + Sbjct: 167 QRSNLGGDIFIHGKTRSHGCLAMGNKAIEELFVLV----AKTRPRNVKVVIAPHDLRKSD 222 Query: 193 MQLYQNNPNYSFWNMLKLGH 212 L N P+ W L + Sbjct: 223 PAL--NLPSQPSW--LPDLY 238 >gi|213972051|ref|ZP_03400145.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301385883|ref|ZP_07234301.1| hypothetical protein PsyrptM_24748 [Pseudomonas syringae pv. tomato Max13] gi|302063774|ref|ZP_07255315.1| hypothetical protein PsyrptK_27639 [Pseudomonas syringae pv. tomato K40] gi|302132524|ref|ZP_07258514.1| hypothetical protein PsyrptN_14095 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213923184|gb|EEB56785.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 187 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF + FI L+ +++++ K +E + N +I+ + + + + K+ Sbjct: 1 MRWLLALFCVSFIPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y++ G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC A+ N M+ Sbjct: 112 SMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|126463622|ref|YP_001044736.1| hypothetical protein Rsph17029_2862 [Rhodobacter sphaeroides ATCC 17029] gi|332559675|ref|ZP_08413997.1| hypothetical protein RSWS8N_11470 [Rhodobacter sphaeroides WS8N] gi|126105286|gb|ABN77964.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029] gi|332277387|gb|EGJ22702.1| hypothetical protein RSWS8N_11470 [Rhodobacter sphaeroides WS8N] Length = 164 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 48/193 (24%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 I L L + L GC S+ I K + P + +++ K + + + Sbjct: 6 ITLIVLALGLAGCGDSK--IRKYDGPPVTS-----------------VQVHKADRKMYLL 46 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 + +L++Y + G K GD + PEG Y+I NP S Y LS+ I + Sbjct: 47 NGS-----KVLRQYDVGLGFKPTGHKQYEGDGRTPEGVYFIDRQ--NPRSTYHLSLGISY 99 Query: 127 PNEFDKAHN-----RTGADLMIHG---------ECASAGCYAMNNKQMQEIYAIVRDSLR 172 PN D+ + G D+ IHG +AGC A+ + +++E+Y++VR Sbjct: 100 PNVLDQKMAFLEGKKPGGDIFIHGRGKYNGPNRRDWTAGCIAITDDEVEEVYSMVRLGT- 158 Query: 173 GNMQSHIQIQAFP 185 I P Sbjct: 159 -------PIYILP 164 >gi|126730073|ref|ZP_01745885.1| ErfK/YbiS/YcfS/YnhG [Sagittula stellata E-37] gi|126709453|gb|EBA08507.1| ErfK/YbiS/YcfS/YnhG [Sagittula stellata E-37] Length = 165 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 22/132 (16%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K E L + + +LK Y + G K GD + PEG Y+I N Sbjct: 34 VVVNKGERRLHLLHHD-----KVLKSYNVGLGFAPQGHKFIEGDGKTPEGNYFIDRR--N 86 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE----------CASAGCYAMNNK 158 PNSK++LSI I +PN D+ + G D+ IHG+ +AGC A+ +K Sbjct: 87 PNSKFYLSIGISYPNPVDRMTAQELGKSPGGDIFIHGQGPNYRKGSPRDWTAGCIAVTDK 146 Query: 159 QMQEIYAIVRDS 170 QM++IYA+V+D Sbjct: 147 QMRDIYAMVQDG 158 >gi|71736308|ref|YP_273601.1| hypothetical protein PSPPH_1343 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487172|ref|ZP_05641213.1| hypothetical protein PsyrptA_28111 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625953|ref|ZP_06458907.1| hypothetical protein PsyrpaN_12636 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647895|ref|ZP_06479238.1| hypothetical protein Psyrpa2_09102 [Pseudomonas syringae pv. aesculi str. 2250] gi|71556861|gb|AAZ36072.1| conserved hypothetical protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|320323189|gb|EFW79278.1| hypothetical protein PsgB076_19577 [Pseudomonas syringae pv. glycinea str. B076] gi|320329540|gb|EFW85529.1| hypothetical protein PsgRace4_12078 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867514|gb|EGH02223.1| hypothetical protein PSYAE_09719 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330874811|gb|EGH08960.1| hypothetical protein Pgy4_06879 [Pseudomonas syringae pv. glycinea str. race 4] gi|330894520|gb|EGH27181.1| hypothetical protein PSYMO_39125 [Pseudomonas syringae pv. mori str. 301020] gi|330985037|gb|EGH83140.1| hypothetical protein PLA107_08431 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009210|gb|EGH89266.1| hypothetical protein PSYTB_05857 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 187 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 30/189 (15%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ F + F+ L+ +++++ K +E + N +I+ + + P + + K+ Sbjct: 1 MRWLFAFFCMSFVPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKPIDKVL--VLKSV 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC A+ N M+ Sbjct: 112 SMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|304409118|ref|ZP_07390739.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183] gi|307303121|ref|ZP_07582876.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175] gi|304352939|gb|EFM17336.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183] gi|306913481|gb|EFN43903.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175] Length = 188 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 34/172 (19%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 ++ ++S + ++ I K+E+ + + + +LK+Y+I G K Sbjct: 32 VTIAALVSPVLHASGMGKVDLVVITKSESSMALLRDG-----KILKQYRIAMGDLPAGHK 86 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE- 146 ++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK R G +MIHG+ Sbjct: 87 LKEGDQRTPQGRYTLDYK--KPDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQN 144 Query: 147 -------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ +V + I+ +P Sbjct: 145 PKSPLSPEQAQQYNWTDGCIAITNAEMDEVWKVVDEGT--------PIEIWP 188 >gi|54302191|ref|YP_132184.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9] gi|46915612|emb|CAG22384.1| hypothetical protein PBPRB0511 [Photobacterium profundum SS9] Length = 246 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 19/200 (9%) Query: 25 LIDKAEHPLSENLIISMQKKRT-SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83 +I + L + + ++ P + K E +E+W ++ +V +K Y I Sbjct: 52 VIKRYSPILEPRISLMFEQVGVQYPPEQIAMFALKEEMQVELWAKD-GEAWVYIKRYDIA 110 Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA------HNRT 137 SG GPK+ GD Q PEG Y + LNPNSKY LS+ + +PNEFD NR Sbjct: 111 KISGKSGPKLREGDHQVPEGIYQV--IGLNPNSKYHLSMQLNYPNEFDLKYAQLEKRNRP 168 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQ 197 GA++ IHG+ S GC AM + ++E++ +V + ++Q+ P + Sbjct: 169 GANIFIHGKAKSVGCLAMGDIAIEELFLLVERAQI----QNVQVVISPSDPRKGPLVPAY 224 Query: 198 NNPNYSFWNMLKLGHDYFEK 217 P FW + EK Sbjct: 225 GQP---FWVT--QLYRDIEK 239 >gi|153874627|ref|ZP_02002774.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152068908|gb|EDN67225.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 172 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 9/127 (7%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 P + FK E LE+W + ++ Y I A SG GPK+ GD Q PEG Y Sbjct: 3 YPPQRLALLGFKAEKRLEVWAEQQT-TWQFIRNYPILAASGVAGPKLREGDRQVPEGIYR 61 Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHN----RT--GADLMIHGECASAGCYAMNNKQM 160 I + LNPNS+Y LS+ I +PNEFD+ RT G ++ IHG+ S GC A+ ++ + Sbjct: 62 INF--LNPNSRYHLSMQINYPNEFDRRKAALENRTDLGGEIFIHGKAVSIGCLAIGDEAI 119 Query: 161 QEIYAIV 167 +E++ +V Sbjct: 120 EELFVLV 126 >gi|256823749|ref|YP_003147712.1| hypothetical protein Kkor_2536 [Kangiella koreensis DSM 16069] gi|256797288|gb|ACV27944.1| conserved hypothetical protein [Kangiella koreensis DSM 16069] Length = 243 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 14/197 (7%) Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEIWKRNV 70 L+I + G ++ ++ + +S P + K E LE+W + Sbjct: 31 LYIKVAGARTVEDVVQTYGEEARNRMVPYFEAAGSSYPPGSVALIAIKEEATLELWDTSA 90 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130 V +++Y + A SG GPK+ GD Q PEG Y I + LNPNS Y LS+ + +PN+F Sbjct: 91 ANP-VFIRKYSVLAQSGVAGPKLREGDMQVPEGIYRIEY--LNPNSSYHLSMKLNYPNDF 147 Query: 131 DKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 D H R G ++ IHG+ S GC AM ++ +E++ + D +I + Sbjct: 148 DLTHARAEGRSEPGTNIFIHGKAVSIGCLAMGDEVAEELFVLASD----IGHRNIDVAIA 203 Query: 185 PFRMTSKNMQLYQNNPN 201 P + +Q P Sbjct: 204 PKDPRKEQLQPISELPW 220 >gi|308535397|ref|YP_002140778.2| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter bemidjiensis Bem] gi|308052742|gb|ACH40982.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR domain-containing protein [Geobacter bemidjiensis Bem] Length = 335 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 26/153 (16%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 + + I K E L + + ++K YKI GPK Sbjct: 181 AAQEEEISPPPVPTGPADKVLIEKKERRLTLLSKG-----EVIKSYKISLGENPNGPKER 235 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--- 146 GD + PEG Y I N +S+Y LS++I +PNE DK + G ++MIHG Sbjct: 236 QGDNKTPEGIYRIDSR--NNDSQYHLSLHISYPNEQDKKRAKQLGVAPGGNIMIHGMRNG 293 Query: 147 -----------CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ ++++QEI +V Sbjct: 294 FSWFGEHHTLIDWTKGCIAVTDEEIQEIAELVP 326 >gi|83649037|ref|YP_437472.1| hypothetical protein HCH_06401 [Hahella chejuensis KCTC 2396] gi|83637080|gb|ABC33047.1| uncharacterized protein conserved in bacteria [Hahella chejuensis KCTC 2396] Length = 178 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 41/191 (21%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + L LF C + + + K +++ K Sbjct: 1 MRKGFLFLTGVLF----ACSAGAEQAQTSLALSESAYMAPLVDK---------VQVKKAS 47 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 +L + K + Y I G K GDE+ PEG Y + W NPNS + Sbjct: 48 RLLILLKEG-----KPFRVYPIALGDKPLGHKQFEGDERTPEGTYSLDWR--NPNSAFHK 100 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC----------------ASAGCYAMNNKQ 159 SI++ +PN+ D + + G +MIHG + GC A+NN+ Sbjct: 101 SIHVSYPNDQDIEYAKSQGREPGGMIMIHGWPNGFNHDRDSIWLYEFDWTDGCIAVNNQA 160 Query: 160 MQEIYAIVRDS 170 M EI+++V D Sbjct: 161 MDEIWSLVPDG 171 >gi|330959130|gb|EGH59390.1| hypothetical protein PMA4326_11282 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 187 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 30/189 (15%) Query: 3 NRYNILLFALF-IFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF L + L+ +++++ K +E + N +I+ + + + + K+ Sbjct: 1 MRWLLALFCLSCVPLSQAAFTQTIVPKGSEQKIINNRVINTESIASKKIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ + LK Y+I G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISGSEA-----LKTYRISLGKNPKGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC A+ N M+ Sbjct: 112 SMHISYPNITDAARARSEGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 E++ +V+D Sbjct: 172 EVWDLVKDG 180 >gi|262371690|ref|ZP_06064969.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205] gi|262311715|gb|EEY92800.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205] Length = 179 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 30/163 (18%) Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90 P+ L ++ T I +FK + W+ + +++ Y I G Sbjct: 17 APIHPALSAQEIEEINKTKPVTTIEVFKQQ-----WQLKLKHHDQIIRSYPIRLGFNPMG 71 Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG 145 K GD + PEG Y I W NP S Y+ S++I +PN D + + G D+MIHG Sbjct: 72 HKQFEGDGKTPEGTYTIDWR--NPQSAYYKSLHISYPNPNDLTYAKQRQKSAGGDVMIHG 129 Query: 146 E------------------CASAGCYAMNNKQMQEIYAIVRDS 170 + GC A+ N M EI+ +V++ Sbjct: 130 TVPTPATALPASSTYMPRKDWTLGCIAVTNADMDEIWQLVKNG 172 >gi|119386750|ref|YP_917805.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans PD1222] gi|119377345|gb|ABL72109.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans PD1222] Length = 169 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 25/147 (17%) Query: 42 QKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100 K +T P + + K + + N +LK Y+I + G K GD + Sbjct: 23 SKFKTYSGPPVTQVVVNKGARQMLLLNGNT-----VLKAYRIGLGNEPLGHKQFEGDGKT 77 Query: 101 PEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK----AHNRT-GADLMIHG---------- 145 PEG YYI NP+S+Y LSI I +PN D R+ G+D+ IHG Sbjct: 78 PEGLYYIDRR--NPDSRYHLSIGISYPNPHDAVLASELGRSAGSDIFIHGQGPEGRALSR 135 Query: 146 --ECASAGCYAMNNKQMQEIYAIVRDS 170 + +AGC A+ + ++++IYA+VRD Sbjct: 136 LRQDWTAGCIAVTDAEVEDIYAMVRDG 162 >gi|294140531|ref|YP_003556509.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12] gi|293327000|dbj|BAJ01731.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12] Length = 185 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 34/187 (18%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R + A+ IF G S + ++ LS + ++++ K ++ + K+ + Sbjct: 7 MRLFFSV-AILIFFAGISLPVSAVSSMQNSLSSSTLVNIGKID-------LVVVTKSTSS 58 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 + + + +L+ Y I G K + GD++ PEG Y + + +S Y+ +I Sbjct: 59 MALMRNG-----KVLRRYHIALGDRPRGHKTQEGDQRTPEGRYTLDYK--KFDSAYYRAI 111 Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCYAMNNKQMQEI 163 +I +PNE D+ + G +MIHG+ + GC A+ N QM E+ Sbjct: 112 HISYPNEEDRLRASALGIQPGGQIMIHGQNPRSSLSAEEAQKYNWTDGCIAITNPQMDEL 171 Query: 164 YAIVRDS 170 + + + Sbjct: 172 WRAIDEG 178 >gi|319784695|ref|YP_004144171.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170583|gb|ADV14121.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 163 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++R+ K E LE+ + +L+ Y I G K + GD++ PEG Y + W Sbjct: 27 LVRVHKAERRLELI-----GDGKVLRNYGIALGGDPVGHKHQEGDQRTPEGNYVLDWR-- 79 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153 NPNS SI+I +PN D+A + G +MIHG+ + GC Sbjct: 80 NPNSIAHKSIHISYPNADDEAAAKARNVGAGGMIMIHGQPNGYGWWGWLLQLVDWTDGCI 139 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ + M EI+A+V D Sbjct: 140 AVTDSDMDEIWALVADG 156 >gi|146308430|ref|YP_001188895.1| hypothetical protein Pmen_3411 [Pseudomonas mendocina ymp] gi|145576631|gb|ABP86163.1| conserved hypothetical protein [Pseudomonas mendocina ymp] Length = 167 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 46/187 (24%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + L L L + + ++ + + K+E Sbjct: 1 MRWLLPLLCLIFSL---------------DVLASTTPAISSHAVDK-----VLVLKSERK 40 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L + +R +K Y+I G K GD + PEGFY+I W P+ KY LS+ Sbjct: 41 LHLQRRGET-----IKSYRISLGKQPNGAKQREGDLRTPEGFYWIDWR--KPSDKYQLSL 93 Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163 +I +PN D A + G+ +MIHG + GC AM N M+E+ Sbjct: 94 HISYPNARDLARAKEAGVPPGSMIMIHGTPLDEEYPEWFFHTLDWTEGCIAMKNDDMREV 153 Query: 164 YAIVRDS 170 +++V+D Sbjct: 154 WSLVKDG 160 >gi|126174741|ref|YP_001050890.1| hypothetical protein Sbal_2528 [Shewanella baltica OS155] gi|153001040|ref|YP_001366721.1| hypothetical protein Shew185_2521 [Shewanella baltica OS185] gi|217973000|ref|YP_002357751.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223] gi|125997946|gb|ABN62021.1| conserved hypothetical protein [Shewanella baltica OS155] gi|151365658|gb|ABS08658.1| conserved hypothetical protein [Shewanella baltica OS185] gi|217498135|gb|ACK46328.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223] Length = 188 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 34/172 (19%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 ++ ++S + ++ I K+E+ + + + +LK+Y+I G K Sbjct: 32 VTIAALVSPVLHASGMGKVDLVVITKSESSMALLRDG-----KILKQYRIAMGDLPAGHK 86 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE- 146 ++ GD++ P+G Y + + P+S Y+ SI+I +PNE DK R G +MIHG+ Sbjct: 87 LKEGDQRTPQGRYTLDYK--KPDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQN 144 Query: 147 -------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ +V + I+ +P Sbjct: 145 PKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDEGT--------PIEIWP 188 >gi|319957168|ref|YP_004168431.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM 16511] gi|319419572|gb|ADV46682.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM 16511] Length = 182 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 33/186 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 MT R +LLFA + S A +SE + K+ S + I K+E Sbjct: 1 MTLR-LLLLFAFGSLIFAAGPS------AFKAVSETVQSLSVSKKPSIPKAQKVLIIKSE 53 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + + +EY I GPK D++ PEG Y + + +S Y+ Sbjct: 54 RKLYLLRNG-----KPYREYHIALGKHPVGPKRREHDQKTPEGNYTLDFK--KADSSYYR 106 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 +I++ +PN DKA + G +MIHG+ +AGC A++N M Sbjct: 107 AIHVSYPNSTDKARAKRLGVNPGGAIMIHGQPNWFGWLSIIRQRFYWTAGCIAVSNGDMD 166 Query: 162 EIYAIV 167 EI+ V Sbjct: 167 EIWQAV 172 >gi|120598543|ref|YP_963117.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1] gi|146293378|ref|YP_001183802.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32] gi|120558636|gb|ABM24563.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1] gi|145565068|gb|ABP76003.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32] gi|319426681|gb|ADV54755.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens 200] Length = 171 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 34/152 (22%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++ I K+E+ + + + +LK+Y+I G K++ GD++ P+G Y + + Sbjct: 35 LVVITKSESNMALLRDG-----KVLKQYRIAMGDLPAGHKLKEGDQRTPQGRYILDYK-- 87 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153 P+S Y+ SI+I +PNE DK + G +MIHG+ + GC Sbjct: 88 KPDSAYYKSIHISYPNEEDKLRAKALGIKPGGMIMIHGQDPKSPLSPAQAQQFNWTNGCI 147 Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 A+ N +M E++ V + I+ +P Sbjct: 148 ALTNAEMDELWKAVDEGT--------PIEIWP 171 >gi|222055904|ref|YP_002538266.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] gi|221565193|gb|ACM21165.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] Length = 174 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 39/183 (21%) Query: 8 LLFALFIFLNGCHHSRSLIDKAE-HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 LL A + + G ++ K E PL ++ + I K L ++ Sbjct: 4 LLLAFVLIIIGSVAVIWMLGKPESKPLPAGVVADR------------VLIEKGPRRLTLF 51 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 ++ LK Y++ G K E GD + PEG Y I +S+Y +++I + Sbjct: 52 RQG-----KRLKTYEVALGRNPQGKKTEEGDCRTPEGIYTIDRR--KQSSRYHRALHISY 104 Query: 127 PNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIV 167 P+ D A + G D+MIHG + GC A+ N ++EI+ +V Sbjct: 105 PSSADVAQAKARSVSPGGDVMIHGLPNALGFVGKVHLIRDWTLGCVAVTNPDIEEIWRVV 164 Query: 168 RDS 170 D Sbjct: 165 PDG 167 >gi|167623553|ref|YP_001673847.1| hypothetical protein Shal_1622 [Shewanella halifaxensis HAW-EB4] gi|167353575|gb|ABZ76188.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4] Length = 169 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 34/159 (21%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 + ++ + K+E + + ++ + K+Y+I G K+ GD++ PEG Y Sbjct: 26 MANGKADLVIVTKSEASMTLLRQG-----KVFKKYRIAMGDNPVGHKLTEGDQRTPEGRY 80 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE-------------- 146 + + +S Y+ +I+I +PN+ D+ G +MIHGE Sbjct: 81 LLDYK--KSDSAYYRAIHISYPNDEDRLRADALGISPGGQIMIHGENPNSSLSPEEAQMY 138 Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ + + I+ +P Sbjct: 139 NWTDGCIAVTNAEMDELWRAIDEGT--------PIEIWP 169 >gi|212634603|ref|YP_002311128.1| ErfK/YbiS/YcfS/YnhG protein [Shewanella piezotolerans WP3] gi|212556087|gb|ACJ28541.1| ErfK/YbiS/YcfS/YnhG [Shewanella piezotolerans WP3] Length = 137 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 34/152 (22%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++ + K+E+ L + + +LK Y+I G K+ GD++ PEG Y + + Sbjct: 1 MVVVTKSESSLSLLREG-----KVLKSYRIAMGDNPVGHKLTEGDQRTPEGRYLLDYK-- 53 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153 +S Y+ SI+I +PN+ D+ G +MIHGE + GC Sbjct: 54 KSDSAYYRSIHISYPNDEDRLRANALGIEPGGQIMIHGENPNSSLSPIEAQQYNWTDGCI 113 Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 A+ N +M E++ + + I+ +P Sbjct: 114 AVTNAEMDELWRAIDEGT--------PIEIWP 137 >gi|331019743|gb|EGH99799.1| hypothetical protein PLA106_27216 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 187 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 30/189 (15%) Query: 3 NRYNILLF-ALFIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF FI L+ +++++ K +E + N +I+ + + + + K+ Sbjct: 1 MRWLLALFYVSFIPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSA 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y++ G K++ GD++ PEGFY++ W P++ Y L Sbjct: 59 RQLQLISGGEA-----LKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 111 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC A+ N M+ Sbjct: 112 SMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 171 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 172 EIWDLVKDG 180 >gi|13476231|ref|NP_107801.1| hypothetical protein mlr7497 [Mesorhizobium loti MAFF303099] gi|14026991|dbj|BAB53587.1| mlr7497 [Mesorhizobium loti MAFF303099] Length = 163 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++R+ K E LE+ + +L+ Y I S K + GD++ PEG Y + W Sbjct: 27 LVRVHKAERRLELI-----GDGKVLRSYGIALGSDPVDHKHQEGDQRTPEGRYMLDWR-- 79 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153 NPNS SI+I +PN D A + G +MIHG+ + GC Sbjct: 80 NPNSIAHRSIHISYPNADDLAAAKARNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTDGCI 139 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ + M EI+A+V D Sbjct: 140 AVTDSDMDEIWAMVADG 156 >gi|260460299|ref|ZP_05808551.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum WSM2075] gi|259033944|gb|EEW35203.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum WSM2075] Length = 163 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++R+ K E LE+ + +++ Y I G K + GD++ PEG Y + W Sbjct: 27 LVRVHKAERRLELI-----GDGKVVRSYGIALGGAPVGHKHQEGDQRTPEGRYILDWR-- 79 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153 NPNS + SI++ +PN D A + G +MIHG+ + GC Sbjct: 80 NPNSIAYKSIHVSYPNADDLAAAKRRNVDAGGMIMIHGQPNGFGWWGWLLQLVDWTDGCI 139 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ + M EI+A V D Sbjct: 140 AVTDSDMDEIWAKVADG 156 >gi|83950747|ref|ZP_00959480.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM] gi|83838646|gb|EAP77942.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM] Length = 161 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 44/181 (24%) Query: 7 ILLFAL--FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 +L+ AL + L+GC + E T + + K + Sbjct: 1 MLMVALIGAVALSGCSSKFKTYNGPEV--------------------THVLVNKGARRMY 40 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 + N +LK Y I G K GD + PEG Y I NPNS + LSI + Sbjct: 41 LLHHN-----QVLKAYDIDLGFAPEGHKQFQGDGKTPEGRYVIDRR--NPNSDFHLSIGL 93 Query: 125 GFPNEFDK----AHNRT-GADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVRD 169 +PN D+ A +T G D+ IHG +AGC ++ ++++++IYA+V++ Sbjct: 94 DYPNMRDRAYALAQGKTPGGDIFIHGRPNTKKKGNGPDWTAGCISVKDREIEDIYAMVKN 153 Query: 170 S 170 Sbjct: 154 G 154 >gi|114562765|ref|YP_750278.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB 400] gi|114334058|gb|ABI71440.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB 400] Length = 167 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 54/202 (26%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R +LF IF + S A+ L + + K+E+ Sbjct: 1 MRALYILFIALIFSPSLAVASSSQTTAKVDL--------------------VVVNKSESR 40 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L + + ++K Y I G K++ GD++ P+G Y + + +S ++ SI Sbjct: 41 LSVMRDG-----RVVKSYLIAMGDVPSGHKLKEGDQRTPQGRYVLDYK--KSDSAFYKSI 93 Query: 123 NIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCYAMNNKQMQEI 163 +I +PNE DK R G +MIHGE + GC A+ NK+M E+ Sbjct: 94 HISYPNEEDKLRADALGIRAGGMIMIHGENPRSTLPPEEAQKYNWTNGCIAVTNKEMDEL 153 Query: 164 YAIVRDSLRGNMQSHIQIQAFP 185 + ++ I+ +P Sbjct: 154 WQMIDAGT--------PIEIWP 167 >gi|28868668|ref|NP_791287.1| hypothetical protein PSPTO_1461 [Pseudomonas syringae pv. tomato str. DC3000] gi|28851907|gb|AAO54982.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 208 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 30/189 (15%) Query: 3 NRYNILLF-ALFIFLNGCHHSRSLIDK-AEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R+ + LF FI L+ +++++ K +E + N +I+ + + + + K+ Sbjct: 22 MRWLLALFYVSFIPLSQAAFTQTIVPKGSEQKIINNKVINTESIASKKIDKVL--VLKSA 79 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y++ G K++ GD++ PEGFY++ W P++ Y L Sbjct: 80 RQLQLISGGEA-----LKTYRVSLGKNPTGTKLQEGDQRTPEGFYWLDWR--KPSNNYNL 132 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G+ +MIHG + GC A+ N M+ Sbjct: 133 SMHISYPNISDSARARREGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNGCIALKNNDMR 192 Query: 162 EIYAIVRDS 170 EI+ +V+D Sbjct: 193 EIWDLVKDG 201 >gi|149204353|ref|ZP_01881320.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. TM1035] gi|149142238|gb|EDM30285.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. TM1035] Length = 167 Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 21/131 (16%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K E + + N L+ YK+ G K GD + PEG Y+I N Sbjct: 37 VIVNKGEREMFLLHHNRT-----LERYKVDLGFSPSGHKQFEGDGRTPEGEYHIDRR--N 89 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC---------ASAGCYAMNNKQ 159 PNS + LS+ I +PNE D A+ + G D+ IHGE +AGC ++ N++ Sbjct: 90 PNSAFHLSLGISYPNEADIAYAKALGKSPGGDIFIHGEPNALAFLSPDWTAGCISVKNRE 149 Query: 160 MQEIYAIVRDS 170 M+++YA+VRD Sbjct: 150 MEDVYAMVRDG 160 >gi|294651441|ref|ZP_06728755.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC 19194] gi|292822687|gb|EFF81576.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC 19194] Length = 212 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 31/159 (19%) Query: 33 LSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 + + + P I +FK++ IL++ N +++EY + G Sbjct: 51 VMPQSLSDEEIIYIRDNTPITKIEVFKHQRILQLKHHN-----EIIREYPMRLGFNPLGH 105 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE 146 K GD + PEG Y I W NPNS Y+ S++I +PNE D A+ + G D+MIHG Sbjct: 106 KQFEGDGKTPEGTYSIDWR--NPNSAYYKSLHISYPNEQDAAYAKQQGRSAGGDIMIHGS 163 Query: 147 ------------------CASAGCYAMNNKQMQEIYAIV 167 + GC A+ N M EI+ +V Sbjct: 164 VPKEYLNLPTSMTYFPQGDWTLGCIAVRNIDMDEIWQLV 202 >gi|298506428|gb|ADI85151.1| lipoprotein, putative [Geobacter sulfurreducens KN400] Length = 174 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 38/164 (23%) Query: 26 IDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85 + E+PL N + I K++ L + +N LK Y++ Sbjct: 23 ARRLENPLPANATADK------------VLIEKSKRQLTLLNKNT-----PLKTYEVSLG 65 Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGAD 140 G K E GD + PEG Y I LN SKY ++++ +P+ D A + G D Sbjct: 66 KEPVGKKTEEGDGRTPEGIYSIDRRKLN--SKYHRALHVSYPSAEDTAQAKARGVSPGGD 123 Query: 141 LMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDS 170 +MIHG + GC A+ N +++EI+ +V D Sbjct: 124 IMIHGLPNGIGFIGKLHTKRDWTLGCIAVTNPEIEEIWRVVPDG 167 >gi|77457235|ref|YP_346740.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens Pf0-1] gi|77381238|gb|ABA72751.1| putative exported protein [Pseudomonas fluorescens Pf0-1] Length = 171 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 44/188 (23%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + LF L + + + PL E ++ + K+ + Sbjct: 1 MRWLLALFCLSFVTVSQASFVTTVTPSNTPLIEKVL-----------------VLKSAHQ 43 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L++ LK Y+I G GPK+ GD++ PEGFY+I W + K+ LS Sbjct: 44 LQLIADG-----KPLKSYRISLGKGAKKGPKLIEGDKRTPEGFYWIDWRKTSE--KFNLS 96 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A R G +MIHG + GC AM N M+E Sbjct: 97 MHISYPNISDSARARREGVEPGGMIMIHGTPDSEDNPEQLFHTLDWTDGCIAMRNVDMRE 156 Query: 163 IYAIVRDS 170 ++ +V D Sbjct: 157 VWNLVPDG 164 >gi|94970797|ref|YP_592845.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345] gi|94552847|gb|ABF42771.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345] Length = 174 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 26/134 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K+ + + +++ + L+ +YK+ GPK GD + PEG Y+I N Sbjct: 39 IVIEKSAHRMALYRSGL-----LVHQYKVSLGGQPVGPKTRQGDHRTPEGQYFIEGR--N 91 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYA 154 +S Y+ S+ I +PN D R G D+MIHG + GC A Sbjct: 92 EHSHYYKSLRISYPNATDLQRAREQKVSPGGDIMIHGLPNGERFIGKLHLLHDWTEGCIA 151 Query: 155 MNNKQMQEIYAIVR 168 + +++M EI+A+VR Sbjct: 152 VTDEEMDEIWALVR 165 >gi|85707820|ref|ZP_01038886.1| ErfK/YbiS/YcfS/YnhG family protein [Erythrobacter sp. NAP1] gi|85689354|gb|EAQ29357.1| ErfK/YbiS/YcfS/YnhG family protein [Erythrobacter sp. NAP1] Length = 193 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 25/171 (14%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT--VIRIFKNENILEIWKRNVDAEYV 75 G + + + P + I K+E +L ++ Sbjct: 23 GTAQQAAATSSFPTQIVPAATRGNASRSIPSRPPVADYLLIDKSERLLVAYQNG-----R 77 Query: 76 LLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA- 133 +K Y+ + G K GDE+ PEG Y I NP S++ LS+ I +PN D+A Sbjct: 78 PIKAYRGLQFGDTPMGHKRFEGDERTPEGLYTIDTR--NPQSRFHLSLRISYPNRQDRAF 135 Query: 134 ---HNR-TGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVRDS 170 + R G D+ IHG+ + GC A++N +++E++ +V D Sbjct: 136 AAQYGRSPGGDIFIHGQPTGRPGRMRGDWTDGCIALSNTEIEELWQLVPDG 186 >gi|294675749|ref|YP_003576364.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003] gi|294474569|gb|ADE83957.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003] Length = 167 Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 46/199 (23%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R +L + L C + P I++FK + Sbjct: 1 MHRRTLLLGLSSLTLLAACGGDSAKFRNYSGPRVTQ-----------------IQVFKRK 43 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + ++ + ++++YKI G K GD + PEG Y+I + NPNS Y L Sbjct: 44 RKMFLFVGDD-----VVRKYKIALGGNPVGKKRFEGDGKTPEGLYHI--SMHNPNSAYHL 96 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGE---------CASAGCYAMNNKQMQEIYAI 166 S+ + +PNE D A+ + G D+MIHG+ +AGC A+ + +++EI+A+ Sbjct: 97 SLRVSYPNEADTAYAEAHGRKPGGDIMIHGQGRKYRGTRGDWTAGCIAVKDDEIEEIFAM 156 Query: 167 VRDSLRGNMQSHIQIQAFP 185 V + I FP Sbjct: 157 VPNGT--------PIFIFP 167 >gi|288941780|ref|YP_003444020.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180] gi|288897152|gb|ADC62988.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180] Length = 210 Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 55/191 (28%) Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVL 76 NGC + + P+ + + K++ LE+ + Sbjct: 53 NGCTTAPPPTTQFNGPVDT------------------VVVKKSQRRLELLSGG-----KV 89 Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136 +++Y++ G K GD++ PEG Y + W NP S ++ +I+I +P D+A +R Sbjct: 90 VRQYRVALGGAPVGHKYREGDQRTPEGRYTLNWR--NPKSNFYKAIHISYPTAKDRATSR 147 Query: 137 ------TGADLMIHGEC----------------ASAGCYAMNNKQMQEIYAIVRDSLRGN 174 G +MIHG + GC A+ N +M EI+++V+D Sbjct: 148 QLGYSNPGGMIMIHGLPNYIQSASLRQQYANRDWTQGCIAVQNHEMDEIWSLVKDGT--- 204 Query: 175 MQSHIQIQAFP 185 IQ P Sbjct: 205 -----PIQIMP 210 >gi|157374959|ref|YP_001473559.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3] gi|157317333|gb|ABV36431.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3] Length = 179 Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 37/191 (19%) Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73 FL C SL A ++ S TS ++ + K+++ + + + Sbjct: 7 FFLLACTIGFSLQSVA---VTSLQSASYSSSNTSIGKIDLVVVDKSQSSMALMRNGQT-- 61 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133 L++Y+I G K+ GD++ PEG Y + + +S Y+ +I+I +PNE D Sbjct: 62 ---LRKYRIAMGDRPVGHKVTEGDQRTPEGRYLLDYK--KSDSAYYRAIHISYPNEEDSL 116 Query: 134 HNR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDSLRGN 174 + G +MIHG+ + GC A+ N QM E++ + + Sbjct: 117 RAKALGLDPGGQIMIHGQNPNSSLSPEEAQRFNWTDGCIAITNAQMDELWRAIDEGT--- 173 Query: 175 MQSHIQIQAFP 185 I+ +P Sbjct: 174 -----PIEIWP 179 >gi|327479744|gb|AEA83054.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 167 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 46/187 (24%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + L L H+ + P+ + + + K+E Sbjct: 1 MRWLLALLCLTF--TAFSHANATPSLGGSPIDK------------------VLVIKSERK 40 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L + LK Y+I G K GD + PEGFY+I W + KY LS+ Sbjct: 41 LHLVSAGQT-----LKSYRISLGKQPNGAKQREGDMRTPEGFYWIDWR--KTSDKYNLSM 93 Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163 +I +PN D A + G+ +M+HG + GC A+ N M+EI Sbjct: 94 HISYPNARDLARAQQEGVAPGSMIMLHGTPVDEEYPEWFFHTLDWTEGCIALTNSDMREI 153 Query: 164 YAIVRDS 170 + +V+D Sbjct: 154 WGLVKDG 160 >gi|226946005|ref|YP_002801078.1| ErfK/YbiS/YcfS/YnhG-like protein [Azotobacter vinelandii DJ] gi|226720932|gb|ACO80103.1| ErfK/YbiS/YcfS/YnhG-related protein [Azotobacter vinelandii DJ] Length = 168 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 43/183 (23%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 LL +L + + G + L E + + I + K+E L + Sbjct: 3 WLLASLCLSVVGLSQASVLSPGEEQRIVDK-----------------ILVVKSERKLMLL 45 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 R LK YK+ GPK GD++ PEG Y+I W + KY LS++I + Sbjct: 46 SRG-----QPLKSYKVSLGKRPTGPKRREGDQRTPEGLYWIDWR--KASDKYNLSMHISY 98 Query: 127 PNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIV 167 PN D+A R G +M+HG + GC AM N ++E++++V Sbjct: 99 PNIRDQAQARAEGVPPGGMIMLHGTPLDENYPEWYFHGLDWTEGCIAMRNDDIREVWSLV 158 Query: 168 RDS 170 +D Sbjct: 159 KDG 161 >gi|78223705|ref|YP_385452.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] gi|78194960|gb|ABB32727.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 175 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + ++K++ +LE+ + L++ Y++ GPK+ GD + PEG Y + +L Sbjct: 40 VVVYKSKRLLEL-----RSGQNLIRSYRVALGRNPVGPKVRAGDFRTPEGIYRLDRRSL- 93 Query: 114 PNSKYFLSINIGFPNEFDKAHNRT-----GADLMIHGEC--------------ASAGCYA 154 S++F SI+I +PN D A R G D+MIHG + GC A Sbjct: 94 -QSRFFRSIHISYPNTEDIATARKQGVSAGGDIMIHGLPTGFEDLGPSHASFDWTKGCIA 152 Query: 155 MNNKQMQEIYAIVRDS 170 + N +M EI+ +VR+ Sbjct: 153 VTNAEMTEIWHLVRNG 168 >gi|24373740|ref|NP_717783.1| hypothetical protein SO_2183 [Shewanella oneidensis MR-1] gi|24348116|gb|AAN55227.1|AE015660_7 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 171 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 34/170 (20%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 LI + ++ I K+E+ + + + +LK+Y+I G K+ Sbjct: 17 AALISPQVLASSGIGKVDLVVITKSESNMALLRDG-----KVLKQYRIAMGDLPTGHKLT 71 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--- 146 GD++ P+G Y + + +S Y+ SI+I +PNE DK R G +MIHG+ Sbjct: 72 EGDQRTPQGRYILDYK--KSDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPR 129 Query: 147 -----------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ V + I+ +P Sbjct: 130 SPLPPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGT--------PIEIWP 171 >gi|113970547|ref|YP_734340.1| hypothetical protein Shewmr4_2210 [Shewanella sp. MR-4] gi|113885231|gb|ABI39283.1| conserved hypothetical protein [Shewanella sp. MR-4] Length = 171 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 34/171 (19%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 LI + ++ I K+E+ + + + +LK+Y+I G K+ Sbjct: 16 VAALISPQVLASSGIGKVDLVVITKSESNMALLRDG-----KILKQYRIAMGDLPTGHKL 70 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE-- 146 GD++ P+G Y + + +S Y+ SI+I +PNE DK R G +MIHG+ Sbjct: 71 TEGDQRTPQGRYILDYK--KSDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNP 128 Query: 147 ------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ V + I+ +P Sbjct: 129 RSPLSPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGT--------PIEIWP 171 >gi|114047782|ref|YP_738332.1| hypothetical protein Shewmr7_2287 [Shewanella sp. MR-7] gi|113889224|gb|ABI43275.1| conserved hypothetical protein [Shewanella sp. MR-7] Length = 171 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 34/170 (20%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 LI + ++ I K+E+ + + + +LK+Y+I G K+ Sbjct: 17 AALISPQVLASSGIGKVDLVVITKSESNMALLRDG-----KILKQYRIAMGDLPTGHKLT 71 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--- 146 GD++ P+G Y + + +S Y+ SI+I +PNE DK R G +MIHG+ Sbjct: 72 EGDQRTPQGRYILDYK--KSDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPR 129 Query: 147 -----------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ V + I+ +P Sbjct: 130 SPLSPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGT--------PIEIWP 171 >gi|253702667|ref|YP_003023856.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21] gi|251777517|gb|ACT20098.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21] Length = 331 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 41/152 (26%), Positives = 62/152 (40%), Gaps = 26/152 (17%) Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95 + I I K L + + ++K YKI GPK Sbjct: 178 AQEEEVSPPAVPTGPADKILIEKKARRLTLLSKG-----EVIKSYKISLGENPNGPKERQ 232 Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE---- 146 GD + PEG Y I N +S+Y LS++I +PNE DK + G ++MIHG Sbjct: 233 GDNKTPEGIYRIDSR--NNDSQYHLSLHISYPNEQDKRRAKQLGVSPGGNVMIHGMRNGF 290 Query: 147 ----------CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ ++++QEI +V Sbjct: 291 SWFGEHHTSIDWTKGCIAVTDEEIQEIAELVP 322 >gi|119385305|ref|YP_916361.1| hypothetical protein Pden_2578 [Paracoccus denitrificans PD1222] gi|119375072|gb|ABL70665.1| conserved hypothetical protein [Paracoccus denitrificans PD1222] Length = 171 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 31/162 (19%) Query: 40 SMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98 S+Q +T P I + K + + + ++K YK+ + FGPK GD Sbjct: 25 SLQPSKTYQGPPITQIVVKKADRKMYLVSGK-----EVVKSYKVNLGNQPFGPKQFEGDG 79 Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHG-------- 145 + PEG Y+I NP S+Y LS+ I +P+ D A R G D+ IHG Sbjct: 80 RTPEGMYFIDR--FNPRSRYHLSVGISYPSAQDVAKAAAMGLRPGGDIFIHGLGPEGRAL 137 Query: 146 --ECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 +AGC A+ +++++EI+ ++R + I +P Sbjct: 138 NRADWTAGCIAVTDEEIEEIFTMLR--------PGVPIFIYP 171 >gi|330504649|ref|YP_004381518.1| hypothetical protein MDS_3735 [Pseudomonas mendocina NK-01] gi|328918935|gb|AEB59766.1| hypothetical protein MDS_3735 [Pseudomonas mendocina NK-01] Length = 167 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K+E L + +R +K Y+I G K GD + PEGFY+I W Sbjct: 32 VLVLKSERKLHLQQRGET-----IKSYRISLGKQPDGAKQREGDLRTPEGFYWIDWR--K 84 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYA 154 P+ KY LS++I +PN D A + G+ +MIHG + GC A Sbjct: 85 PSDKYQLSLHISYPNARDLAKAKEAGVPPGSMIMIHGTPLDEEYPEWFFHTLDWTEGCIA 144 Query: 155 MNNKQMQEIYAIVRDS 170 M N M+E++++V+D Sbjct: 145 MKNDDMREVWSLVKDG 160 >gi|226954427|ref|ZP_03824891.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244] gi|226834776|gb|EEH67159.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244] Length = 198 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 30/137 (21%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I +FK++ IL++ N +++EY + G K GD + PEG Y I W N Sbjct: 59 IEVFKHQRILQLKHHN-----EIIREYPMRLGFNPLGHKQFEGDGKTPEGTYSIDWR--N 111 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------------CASA 150 PNS Y+ S++I +PNE D A+ + G D+MIHG + Sbjct: 112 PNSAYYKSLHISYPNEQDAAYAKQQGRSAGGDIMIHGSVPKEYLNLPTSMTYFPQGDWTL 171 Query: 151 GCYAMNNKQMQEIYAIV 167 GC A+ N M EI+ +V Sbjct: 172 GCIAVRNIDMDEIWQLV 188 >gi|117920863|ref|YP_870055.1| hypothetical protein Shewana3_2420 [Shewanella sp. ANA-3] gi|117613195|gb|ABK48649.1| conserved hypothetical protein [Shewanella sp. ANA-3] Length = 186 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 34/170 (20%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 LI + ++ I K+E+ + + + +LK+Y+I G K+ Sbjct: 32 AALISPQVLASSGIGKVDLVVITKSESNMALLRDG-----KILKQYRIAMGDLPTGHKLT 86 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--- 146 GD++ P+G Y + + +S Y+ SI+I +PNE DK R G +MIHG+ Sbjct: 87 EGDQRTPQGRYILDYK--KSDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPR 144 Query: 147 -----------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ V + I+ +P Sbjct: 145 SPLTPEQAQQYNWTDGCIAITNAEMDEVWKAVDEGT--------PIEIWP 186 >gi|42523534|ref|NP_968914.1| hypothetical protein Bd2061 [Bdellovibrio bacteriovorus HD100] gi|39575740|emb|CAE79907.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 204 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 37/199 (18%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHP---------LSENLIISMQKKRTSPFHP 51 M L+ N +DK+ L + S+ + + Sbjct: 1 MKKTLLPLIALSLFATNSFAAGSKALDKSFRYCQDISQVDKLLDRSRESVDRLQAEELKV 60 Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I + K+ L + LLK Y + G K GD + PEG Y I + Sbjct: 61 ERIVVSKDRKELYLISGET-----LLKVYPVAFGRNPVGHKQFEGDNKTPEGLYSIDYK- 114 Query: 112 LNPNSKYFLSINIGFPNEFD----KAHNRT-GADLMIHGEC----------------ASA 150 NP S+Y ++++ +PN+ D KA ++ G D+MIHG + Sbjct: 115 -NPQSQYTKALHVSYPNKADVEFAKAQGKSAGGDIMIHGLPSEERKGQAVGLIHPMNWTQ 173 Query: 151 GCYAMNNKQMQEIYAIVRD 169 GC A+ N +++EIY++V++ Sbjct: 174 GCVAVTNPEIEEIYSLVKE 192 >gi|311696719|gb|ADP99592.1| ErfK/YbiS/YcfS/YnhG family protein [marine bacterium HP15] Length = 187 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 30/171 (17%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPT----VIRIFKNENILEIWKRNVDAEYVLLK 78 + L M + + K E L + +++ Sbjct: 17 AAAPTAVATELLAKADTRMPVATMYEPAEIQNVSRVVVRKGERRLYLMDGED-----VVR 71 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN--- 135 Y+I G K+ GDE+ PEG Y + W N S ++ SI+I +P+E D+ Sbjct: 72 SYRISLGDNPEGHKLYEGDERTPEGDYTLDWR--NAESDFYKSIHISYPSERDRELASAW 129 Query: 136 --RTGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDS 170 G +MIHG + GC A+ N++M EI+ +V + Sbjct: 130 GLDPGGSIMIHGLPNNVGDMAFAYTGLDWTDGCIAVTNEEMDEIWQLVSNG 180 >gi|327192576|gb|EGE59525.1| hypothetical protein RHECNPAF_213007 [Rhizobium etli CNPAF512] Length = 179 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 38/189 (20%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + +L A + + P++ + +IR++K+E Sbjct: 1 MRTKIIVLAVATGSLFVYTKVMARIGSGSPPPVAPTEQRA-----------DLIRVYKSE 49 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + + + + + Y+I S GPK GDE+ PEG Y I W NP S Sbjct: 50 RRMVLLRGD-----APIATYQISLGSAADAGPKQREGDEKTPEGRYEIDWR--NPKSMAH 102 Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQM 160 LS++I +PN ++ G +MIHG + GC A+ N +M Sbjct: 103 LSLHISYPNPKERRAAEANGFPPGGSIMIHGLPNGWGLLGQAHRLWDWTDGCIAVTNTEM 162 Query: 161 QEIYAIVRD 169 +EI+A V D Sbjct: 163 REIWARVPD 171 >gi|157961382|ref|YP_001501416.1| hypothetical protein Spea_1556 [Shewanella pealeana ATCC 700345] gi|157846382|gb|ABV86881.1| conserved hypothetical protein [Shewanella pealeana ATCC 700345] Length = 171 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 34/159 (21%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 + ++ + K+E + I ++ +LK+Y+I G K+ GD++ PEG Y Sbjct: 28 MASGKADLVVVTKSEASMAILRQG-----KVLKKYRIAMGDNPVGHKLTEGDQRTPEGRY 82 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE-------------- 146 + + +S Y+ +I+I +PN+ DK G +MIHGE Sbjct: 83 ILDYK--KSDSAYYRAIHISYPNDEDKLRADALGISPGGQIMIHGENPNSSLTPEEAQMY 140 Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N +M E++ + I+ +P Sbjct: 141 NWTDGCIAITNAEMDELWRAIE--------PGTPIEIWP 171 >gi|15598951|ref|NP_252445.1| hypothetical protein PA3756 [Pseudomonas aeruginosa PAO1] gi|107103271|ref|ZP_01367189.1| hypothetical protein PaerPA_01004340 [Pseudomonas aeruginosa PACS2] gi|116051754|ref|YP_789407.1| hypothetical protein PA14_15840 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889966|ref|YP_002438830.1| hypothetical protein PLES_12241 [Pseudomonas aeruginosa LESB58] gi|254236665|ref|ZP_04929988.1| hypothetical protein PACG_02669 [Pseudomonas aeruginosa C3719] gi|254242447|ref|ZP_04935769.1| hypothetical protein PA2G_03196 [Pseudomonas aeruginosa 2192] gi|296387735|ref|ZP_06877210.1| hypothetical protein PaerPAb_06264 [Pseudomonas aeruginosa PAb1] gi|313109166|ref|ZP_07795136.1| hypothetical protein PA39016_001690005 [Pseudomonas aeruginosa 39016] gi|9949925|gb|AAG07143.1|AE004794_8 hypothetical protein PA3756 [Pseudomonas aeruginosa PAO1] gi|115586975|gb|ABJ12990.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126168596|gb|EAZ54107.1| hypothetical protein PACG_02669 [Pseudomonas aeruginosa C3719] gi|126195825|gb|EAZ59888.1| hypothetical protein PA2G_03196 [Pseudomonas aeruginosa 2192] gi|218770189|emb|CAW25951.1| hypothetical protein PLES_12241 [Pseudomonas aeruginosa LESB58] gi|310881638|gb|EFQ40232.1| hypothetical protein PA39016_001690005 [Pseudomonas aeruginosa 39016] Length = 166 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 49/188 (26%) Query: 3 NRYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R+ + L L L + + SL K + + + K+E Sbjct: 1 MRWLLALLCLTFASLTQANAAPSLEGKVDK----------------------VLVLKSER 38 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L + + +LK Y++ GPK+ GD + PEGFY+I W + N Y LS Sbjct: 39 KLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLS 91 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A R G +MIHG + GC AMNN M+E Sbjct: 92 MHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMRE 151 Query: 163 IYAIVRDS 170 ++++V+D Sbjct: 152 VWSVVKDG 159 >gi|49081476|gb|AAT50138.1| PA3756 [synthetic construct] Length = 167 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 78/188 (41%), Gaps = 49/188 (26%) Query: 3 NRYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R+ + L L L + + SL K + + + K+E Sbjct: 1 MRWLLALLCLTFASLTQANAAPSLEGKVDK----------------------VLVLKSER 38 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L + + +LK Y++ GPK+ GD + PEGFY+I W + N Y LS Sbjct: 39 KLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLS 91 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A R G +MIHG + GC AMNN M+E Sbjct: 92 MHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMRE 151 Query: 163 IYAIVRDS 170 ++++V+D Sbjct: 152 VWSVVKDG 159 >gi|260576138|ref|ZP_05844131.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2] gi|259021618|gb|EEW24921.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2] Length = 165 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 21/129 (16%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I++ K + + + +L++Y I G K GD + PEG Y I + N Sbjct: 35 IQVHKAARKMYLLHND-----KVLEQYDIALGFAPIGHKQFEGDGKTPEGAYQINFR--N 87 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG---------ECASAGCYAMNNKQ 159 P+S Y LS+ I +P+E D+A TG D+ IHG +AGC A+ +++ Sbjct: 88 PDSDYHLSLKISYPDENDRAFADEAGKPTGGDIFIHGHSNWKGRNKGDWTAGCIAVTDRE 147 Query: 160 MQEIYAIVR 168 M+ IY++VR Sbjct: 148 MEVIYSMVR 156 >gi|78224670|ref|YP_386417.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] gi|78195925|gb|ABB33692.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 341 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K + + + +LK Y+I GPK GD + PEG Y I N Sbjct: 206 ILIEKQARRMMLISKG-----AVLKTYRIALGGDPIGPKERQGDNKTPEGAYTIDAR--N 258 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIH--------------GECASAGCYA 154 +S+Y +++I +PNE D+ R G ++MIH G + GC A Sbjct: 259 RDSRYHRALHISYPNERDRKRARELGVSPGGNIMIHGIKNGFSWVGDAHAGVDWTKGCIA 318 Query: 155 MNNKQMQEIYAIVRDS 170 + +++++EI + + Sbjct: 319 VTDEEIEEIDTLAPNG 334 >gi|146281566|ref|YP_001171719.1| hypothetical protein PST_1182 [Pseudomonas stutzeri A1501] gi|145569771|gb|ABP78877.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 167 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 46/187 (24%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + L L H+ + P+ + + + K+E Sbjct: 1 MRWLLALLCLTF--TAFSHANATPSLGGSPIDK------------------VLVIKSERK 40 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L + LK Y+I G K GD + PEG Y+I W + KY LS+ Sbjct: 41 LHLVSAGQT-----LKSYRISLGKQPNGAKQREGDMRTPEGLYWIDWR--KTSDKYNLSM 93 Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEI 163 +I +PN D A + G+ +M+HG + GC A+ N M+EI Sbjct: 94 HISYPNARDLARAQQEGVAPGSMIMLHGTPVDEEYPEWFFHTLDWTEGCIALTNSDMREI 153 Query: 164 YAIVRDS 170 + +V+D Sbjct: 154 WGLVKDG 160 >gi|255066178|ref|ZP_05318033.1| ErfK/YbiS/YcfS/YnhG [Neisseria sicca ATCC 29256] gi|255049723|gb|EET45187.1| ErfK/YbiS/YcfS/YnhG [Neisseria sicca ATCC 29256] Length = 194 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 38/170 (22%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 S+ + +E PL EN +I + + K++ + + + LL Sbjct: 35 ATSGESSVAEPSETPLPENAVIDR------------LVVHKSKRTMSAYSQG-----KLL 77 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK----A 133 K Y I G K GD + PEG Y I NPNS Y ++ + +PNE DK A Sbjct: 78 KTYPIALGKQPVGHKHFEGDGKTPEGKYRINDR--NPNSAYHKNLGVSYPNEADKAYAAA 135 Query: 134 HNR-TGADLMIHG--------------ECASAGCYAMNNKQMQEIYAIVR 168 + G + IHG + GC A+ ++++ E+Y V+ Sbjct: 136 QGKSPGGLIKIHGIKNGWGSIGKRHLQRDWTDGCIAVTDEEIDELYRSVK 185 >gi|114769815|ref|ZP_01447425.1| hypothetical protein OM2255_09611 [alpha proteobacterium HTCC2255] gi|114549520|gb|EAU52402.1| hypothetical protein OM2255_09611 [alpha proteobacterium HTCC2255] Length = 169 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 36/183 (19%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + +L + +GC +S ++ + + I + K++ Sbjct: 1 MKLFNILLFMAFIFSGCFNSSTVYKSIPNYNGPKITK--------------IVVNKSQRK 46 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L ++ + +++++K+ K + GD + PEG Y+I N NSKYFLS+ Sbjct: 47 LFLFHND-----KIIRKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRK--NYNSKYFLSL 99 Query: 123 NIGFPNEFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIV 167 I +PN DK + + G D+ IHG +AGC ++++K M+ IY++V Sbjct: 100 GISYPNTEDKKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISVSDKNMKVIYSMV 159 Query: 168 RDS 170 + Sbjct: 160 KAG 162 >gi|170727112|ref|YP_001761138.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908] gi|169812459|gb|ACA87043.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908] Length = 179 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 34/152 (22%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++ + K+E + + + ++++Y+I G K++ GD++ PEG Y + + Sbjct: 43 LVVVTKSEAKMVLMRNG-----KVMRQYRIAMGDRPKGHKLKEGDQRTPEGRYILDYK-- 95 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S Y+ +I+I +PN+ DK + G +MIHG+ + GC Sbjct: 96 KSDSAYYRAIHISYPNDEDKLRAKALGISPGGQIMIHGQNPNSSLTPEEAQKFNWTDGCI 155 Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 A+ N+QM E++ G+++ I+ +P Sbjct: 156 AITNRQMDELW--------GSIEPGTPIEIWP 179 >gi|257454799|ref|ZP_05620050.1| ErfK/YbiS/YcfS/YnhG family protein [Enhydrobacter aerosaccus SK60] gi|257447732|gb|EEV22724.1| ErfK/YbiS/YcfS/YnhG family protein [Enhydrobacter aerosaccus SK60] Length = 185 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 32/183 (17%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 ++LFA FL G ++ + + + + + + K+ I++ Sbjct: 7 ILVILFAWLYFL-GLPKPEKIVKANNSDKP--TMNYLAQNKIYADK---VYVKKSARIMQ 60 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 + N +++EY I G K + GDE+ PEG+Y + W N S + S+++ Sbjct: 61 LLHNNS-----VIREYNIALGDNPKGHKQQEGDERTPEGWYTLDWA--NEQSAAYRSLHV 113 Query: 125 GFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYA 165 +PN D+A+ + G +MIHG+ + GC A+ N +M EI Sbjct: 114 SYPNSKDRANAKMLGVSPGGAIMIHGQMNGTELLTAFNQKRDWTNGCIAVTNSEMDEIMT 173 Query: 166 IVR 168 +V+ Sbjct: 174 LVK 176 >gi|127512419|ref|YP_001093616.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4] gi|126637714|gb|ABO23357.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4] Length = 194 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 34/171 (19%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 S L ++ ++ + K+E + + ++ +L+ YKI G K+ Sbjct: 39 SSGLSSPHSTSKSQIGKVDLVVVNKSEASMLLMRQG-----KVLRRYKIALGDRPVGHKL 93 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE-- 146 + GD++ PEG Y + + +S Y+ +I+I +PN+ DK G +MIHG+ Sbjct: 94 QEGDQRTPEGRYILDYK--KADSAYYRAIHISYPNDEDKLRAAALGINPGGQIMIHGQNP 151 Query: 147 ------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N+++ E++ V I+ +P Sbjct: 152 NSSLTPDEAQRLNWTDGCIAIKNEEIDELWRAVDTGT--------PIEIWP 194 >gi|308270259|emb|CBX26871.1| hypothetical protein N47_A09000 [uncultured Desulfobacterium sp.] Length = 337 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K E L + +N +LK YKI GPK GD + PEG Y+I N Sbjct: 202 ILIEKKERRLTLMSKN-----KVLKTYKIALGENPDGPKERQGDYKTPEGIYFIDSR--N 254 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154 + +Y LS++I +PNE DK + G D++IHG + GC A Sbjct: 255 NSRRYHLSLHISYPNENDKKRAKALGISPGGDIVIHGIKNGFSWVGDLHTKFNWTKGCIA 314 Query: 155 MNNKQMQEIYAIVRDS 170 + + +++EI +V + Sbjct: 315 VTDDEIEEIDKLVPNG 330 >gi|257459222|ref|ZP_05624341.1| protein erfk [Campylobacter gracilis RM3268] gi|257443607|gb|EEV18731.1| protein erfk [Campylobacter gracilis RM3268] Length = 186 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 31/188 (16%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + + L + L + E ++ + + IR++K++ Sbjct: 1 MKFKILLPLIIIAAGLAWALDNYLSYKNIET-INSEIPLKQALDGEQISK---IRVYKSK 56 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 ILEI + K YKI G K GD + PEG Y I NPNS Y L Sbjct: 57 RILEILTSKG-----VAKSYKIALGREPEGHKEVQGDGKTPEGNYTINGK--NPNSAYHL 109 Query: 121 SINIGFPNEFDKAHNRT-----GADLMIHGEC---------------ASAGCYAMNNKQM 160 ++ I +PN+ D AH ++ G D+ IHG + GC A+ N M Sbjct: 110 NLGISYPNKADVAHAKSLGKSAGGDIKIHGLPNKFSYLGQSIAAFGDWTEGCIALVNDDM 169 Query: 161 QEIYAIVR 168 E++ V+ Sbjct: 170 DELFEHVK 177 >gi|261379335|ref|ZP_05983908.1| putative lipoprotein [Neisseria subflava NJ9703] gi|284797774|gb|EFC53121.1| putative lipoprotein [Neisseria subflava NJ9703] Length = 186 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 32/183 (17%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT-VIRIFKNENILE 64 L A+ + + + S + + + + + K++ + Sbjct: 7 IGLAVAMLSAVAALVFWFAAPIR-----STTTVATPSEAALPENAVIDRLVVHKSKRTMS 61 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 + + LLK Y I G K GD + PEG Y I NPNS Y ++ + Sbjct: 62 AYSQG-----RLLKTYPISLGKQPVGHKQFEGDGKTPEGKYRINER--NPNSGYHKNLGV 114 Query: 125 GFPNEFDK----AHNR-TGADLMIHG--------------ECASAGCYAMNNKQMQEIYA 165 +PNE DK A + G + IHG + + GC A+ ++++ E+Y Sbjct: 115 SYPNEADKAYAAAQGKSPGGLIKIHGMKNGWGFIGKKHLQKDWTNGCIAVTDEEVDELYR 174 Query: 166 IVR 168 V+ Sbjct: 175 SVK 177 >gi|93005670|ref|YP_580107.1| hypothetical protein Pcryo_0840 [Psychrobacter cryohalolentis K5] gi|92393348|gb|ABE74623.1| conserved hypothetical protein [Psychrobacter cryohalolentis K5] Length = 187 Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 38/183 (20%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 + ++ F+L I + + + + + + N++I + + K+ L+ Sbjct: 15 FIVIGFSLAIMTSTSAIAAEGVSENKQAMLNNIMIDK------------VFVDKSARTLQ 62 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 + N ++K Y I G K + GD++ P G Y + + N SK++ SI++ Sbjct: 63 LLSDN-----KVIKSYHIALGGNPVGHKQQQGDKRTPTGSYILDYK--NEKSKFYRSIHV 115 Query: 125 GFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYA 165 +PN DKA + G D+MIHG+ + GC A+ + +M EI A Sbjct: 116 SYPNAADKARAKSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTDGCIAVTDNEMDEIMA 175 Query: 166 IVR 168 V Sbjct: 176 AVE 178 >gi|310817141|ref|YP_003965105.1| ErfK/YbiS/YcfS/YnhG family protein [Ketogulonicigenium vulgare Y25] gi|308755876|gb|ADO43805.1| ErfK/YbiS/YcfS/YnhG family protein [Ketogulonicigenium vulgare Y25] Length = 142 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 21/142 (14%) Query: 47 SPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 P P + +K L + + +++ Y G K GD + PEG Y Sbjct: 5 DPNTPVTHLLAYKGNRSLYLMANDT-----VVRSYNFGLGFQPVGHKQFEGDGKTPEGIY 59 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------ASAGC 152 + NP S Y LS+ I +PN D+ + + G D+ IHG + GC Sbjct: 60 TMDRR--NPRSAYHLSVGISYPNLADREYAKQYNRSPGGDIFIHGTPQRFVGAGDWTVGC 117 Query: 153 YAMNNKQMQEIYAIVRDSLRGN 174 A+ N +++EIY +V R + Sbjct: 118 MAVTNAEVEEIYRLVPLGARIH 139 >gi|241667037|ref|YP_002985121.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240862494|gb|ACS60159.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 179 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 75/188 (39%), Gaps = 38/188 (20%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M N++ IL + + + P + + + IR++K E Sbjct: 1 MRNKFVILAAVVVSLFAYTKLMARIGAGSPPPDAPLEQQADR-----------IRVYKTE 49 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + + K + + Y+I GPK GDE+ PEG Y I W NP S Sbjct: 50 RRMVLLKGDT-----PISTYRISLGQAADEGPKQREGDEKTPEGRYEIDWR--NPKSMAH 102 Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQM 160 LS++I +P+ D+ + G ++MIHG + GC A+ N +M Sbjct: 103 LSLHISYPDPDDRRNAEAGGFPPGGNIMIHGLPNGWGLFGNAHQLWDWTDGCIAVTNAEM 162 Query: 161 QEIYAIVR 168 +EI+A V Sbjct: 163 REIWARVP 170 >gi|119775248|ref|YP_927988.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] gi|119767748|gb|ABM00319.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B] Length = 165 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 35/167 (20%) Query: 39 ISMQKKRTSPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 S+Q P ++ + K E ++++ R L+K Y+I G K++ GD Sbjct: 14 ASVQANAIKPGQKVDLVVVNKAEAQMQVFYRG-----ELIKSYRIAMGDNPKGHKLKEGD 68 Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------ 146 ++ P+G Y + + +S Y+ SI+I +PN+ D + G +MIHG+ Sbjct: 69 QRTPQGRYLLDFK--KADSAYYRSIHISYPNDEDILRAKALGISPGGAIMIHGQDPKSPL 126 Query: 147 --------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N+ M E++ ++ I+ +P Sbjct: 127 SAEEAQKYNWTNGCIAVTNRDMDELWQLID--------PGTPIEIWP 165 >gi|148266084|ref|YP_001232790.1| hypothetical protein Gura_4074 [Geobacter uraniireducens Rf4] gi|146399584|gb|ABQ28217.1| Uncharacterized protein-like protein [Geobacter uraniireducens Rf4] Length = 171 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 26/134 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K+E ++++ K ++K Y+I G K + GD++ PEG Y + N Sbjct: 36 VVVIKSERVMKLLKEGT-----VVKSYEIALGKEPVGAKAQKGDKKTPEGTYILDRR--N 88 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYA 154 NSK++ SI++ +PN D + + G D+MIHG + GC A Sbjct: 89 SNSKFYRSIHVSYPNRSDLENAQKYGVSPGGDIMIHGLPKGLERVGELHTLINWTKGCIA 148 Query: 155 MNNKQMQEIYAIVR 168 + N QM EI+ +V Sbjct: 149 VTNAQMDEIWQMVP 162 >gi|152991672|ref|YP_001357393.1| hypothetical protein SUN_0076 [Sulfurovum sp. NBC37-1] gi|151423533|dbj|BAF71036.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 215 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 34/194 (17%) Query: 1 MTNRYNILL--FALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT-VIRIF 57 M N+ L+ L +F +GC S K ++ LSE M + S I + Sbjct: 26 MNNKIYFLIYSIVLVLFFSGCEPSG---PKNQYNLSECKKELMTAEDYSEADAIDRIVVV 82 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E + ++K + + I G K + GD + PEG ++I +P K Sbjct: 83 KKERKMYLYKDG-----KVKGTFPISLGRNPVGHKQQKGDYRTPEGEFFIHRKLCSP--K 135 Query: 118 YFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----------------ASAGCYAMN 156 Y+ S+ I +P DKA R G D+ IH + + GC A+ Sbjct: 136 YYRSLCISYPRPEDKARARARGVNPGGDITIHAQPKWNADGKGDKYTLNRNWTQGCVAVT 195 Query: 157 NKQMQEIYAIVRDS 170 N M++++ VR+ Sbjct: 196 NSSMKKLWYAVREG 209 >gi|152986155|ref|YP_001346746.1| hypothetical protein PSPA7_1362 [Pseudomonas aeruginosa PA7] gi|150961313|gb|ABR83338.1| hypothetical protein PSPA7_1362 [Pseudomonas aeruginosa PA7] Length = 166 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 49/188 (26%) Query: 3 NRYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R+ + + L L + + +L K + + + K+E Sbjct: 1 MRWLLAVLCLTFASLIQANAAPTLDGKVDK----------------------VLVLKSER 38 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L + + +LK Y++ GPK+ GD + PEGFY+I W + N Y LS Sbjct: 39 KLLLLNKGN-----VLKSYRVSLGKRPTGPKLAEGDNRTPEGFYWIDWRKTSNN--YNLS 91 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A R G +MIHG + GC AMNN M+E Sbjct: 92 MHISYPNARDVAKAREKGLPAGGMIMIHGTPLDDEYPEWYFSTLDWTNGCIAMNNTDMRE 151 Query: 163 IYAIVRDS 170 ++++V+D Sbjct: 152 VWSVVKDG 159 >gi|206889453|ref|YP_002248809.1| ErfK/YbiS/YcfS/YnhG [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741391|gb|ACI20448.1| ErfK/YbiS/YcfS/YnhG [Thermodesulfovibrio yellowstonii DSM 11347] Length = 160 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 49/183 (26%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +LLF++ IF+ + S + ++ + K++ + + Sbjct: 1 MLLFSILIFIFSVNTSLAYETVD-----------------------LVVVIKSKRAMFLM 37 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 K ++K YK+ G K+ GD + PEG YYI NPNS ++ ++ I + Sbjct: 38 KEG-----KIVKAYKVALGKTPVGKKVSQGDGKTPEGRYYIIGR--NPNSNFYKALKISY 90 Query: 127 PNEFDKAHN-----RTGADLMIHG--------------ECASAGCYAMNNKQMQEIYAIV 167 PNE D G +MIHG + + GC A+ N++M EI+ +V Sbjct: 91 PNEQDIEQAIKLHVNPGGGIMIHGLSKHVEYLGKYHIIDDWTEGCIAVTNEEMDEIWKLV 150 Query: 168 RDS 170 D Sbjct: 151 PDG 153 >gi|161170313|gb|ABX59283.1| uncharacterized protein conserved in bacteria [uncultured marine bacterium EB000_55B11] Length = 190 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 36/182 (19%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 + +L + +GC +S ++ + + I + K++ L Sbjct: 23 KLFNILLFMAFIFSGCFNSSTVYKSIPNYNGPKITK--------------IVVNKSQRKL 68 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123 ++ + +++++K+ K + GD + PEG Y+I N NSKYFLS+ Sbjct: 69 FLFHND-----KIIRKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRK--NYNSKYFLSLG 121 Query: 124 IGFPNEFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVR 168 I +PN DK + + G D+ IHG +AGC ++++K M+ IY++V+ Sbjct: 122 ISYPNTEDKKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISVSDKNMKVIYSMVK 181 Query: 169 DS 170 Sbjct: 182 AG 183 >gi|308050605|ref|YP_003914171.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799] gi|307632795|gb|ADN77097.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799] Length = 248 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 12/138 (8%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + K + +E+W + D ++ L+ Y I SG+ PK+ GD PEG Y I N Sbjct: 60 LVAIKADRRMEVWLQGADGQWGELRSYPILEASGSLRPKMRQGDFLVPEGVYRIEAA--N 117 Query: 114 PNSKYFLSINIGFPNEFDK------AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167 PNS Y LS+ I +PN D+ G D+ IHG S GC AM ++ ++E++ + Sbjct: 118 PNSLYHLSLKIDYPNAMDQHYGAMEQRGDLGGDIFIHGRDVSQGCLAMGDRYIEELFVLA 177 Query: 168 RDSLRGNMQSHIQIQAFP 185 D +I++ P Sbjct: 178 HD----IGLENIEVVISP 191 >gi|150395748|ref|YP_001326215.1| hypothetical protein Smed_0524 [Sinorhizobium medicae WSM419] gi|150027263|gb|ABR59380.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 180 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 26/173 (15%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL GC ++ A ++ + + +FK +L++++ Sbjct: 6 FLWGCWFWMRIVKIAWMMTLFAATVAFPLSALAAETADKVIVFKERRVLQLFQGE----- 60 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134 LL+EY + GPK GD++ PEG Y + W NP S ++ SI+I +P D Sbjct: 61 KLLREYPVVLGGNPVGPKRREGDQKTPEGSYVLDWR--NPGSSFYKSIHISYPAPKDLEE 118 Query: 135 N-----RTGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVR 168 G +MIHG+ + GC A+ N +M EI+ +V Sbjct: 119 AAARYVEPGGMIMIHGQPNYLGWLAFLTQMFDWTNGCIAVTNAEMDEIWDMVP 171 >gi|330811494|ref|YP_004355956.1| hypothetical protein PSEBR_a4539 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379602|gb|AEA70952.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 168 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 77/188 (40%), Gaps = 47/188 (25%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ ++LF L S + + E ++ + K+ + Sbjct: 1 MRWLLVLFCLSFT---AMSQASAVGTYNGKVIEKVL-----------------VLKSAHQ 40 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L++ LK Y+I G GPK+ GD++ PEGFY+I W + N Y+LS Sbjct: 41 LQLINDG-----KPLKTYRISLGRGAKKGPKLIEGDKRTPEGFYWIDWRKTSEN--YYLS 93 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A R G +MIHG + GC AM N M+E Sbjct: 94 MHISYPNISDAARARREGVEPGGMIMIHGTPDSEENPEQLFHTLDWTDGCIAMRNVDMRE 153 Query: 163 IYAIVRDS 170 ++ +V D Sbjct: 154 VWNLVPDG 161 >gi|253559443|gb|ACT32405.1| hypothetical protein [Pseudomonas fluorescens] Length = 168 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 49/189 (25%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT-VIRIFKNEN 61 R+ ++LF L + T + + K+ + Sbjct: 1 MRWLLVLFCLSF---------------------TTVSQASAVGTYNGKVIEKVLVLKSAH 39 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L++ LK Y+I G GPK+ GD++ PEGFY++ W + +++L Sbjct: 40 QLQLINDG-----KPLKTYRISLGKGAKKGPKLIEGDKRTPEGFYWLDWR--KTSDRFYL 92 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +PN D A R G +MIHG + GC AM N M+ Sbjct: 93 SMHISYPNISDAARARREGVEPGGMIMIHGTPDSEENPEQLFHTLDWTDGCIAMRNVDMR 152 Query: 162 EIYAIVRDS 170 E++ +V D Sbjct: 153 EVWNLVPDG 161 >gi|237751635|ref|ZP_04582115.1| ERFK [Helicobacter bilis ATCC 43879] gi|229373001|gb|EEO23392.1| ERFK [Helicobacter bilis ATCC 43879] Length = 174 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 39/179 (21%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +LLF + L S + E+P+ +L + K I + K + ILE++ Sbjct: 1 MLLFCILTLLY--QISIATERGQEYPIDLSLKGRVAK----------IVVHKQKRILELY 48 Query: 67 KRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 D + LLK Y I G K GD + PEG YYI NP S+YFL++ I Sbjct: 49 ----DDKNKLLKSYPHIALGKNPQGHKEFEGDSKTPEGLYYIDSK--NPKSRYFLNLGIS 102 Query: 126 FPNEFDKAHNRT-----GADLMIHGEC---------------ASAGCYAMNNKQMQEIY 164 +PN+ D A+ + G D+ IHG + GC A++N M+E+Y Sbjct: 103 YPNKLDIANAKKHNKNAGGDIKIHGLPNGMNIAKELFKQYGDWTDGCIALDNASMKELY 161 >gi|91793728|ref|YP_563379.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217] gi|91715730|gb|ABE55656.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217] Length = 181 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 35/170 (20%) Query: 36 NLIISMQKKRTSPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 + S + + ++ + K+ + + I + +K Y I G K++ Sbjct: 27 QVQASSNQHFITKTSKVDLVVVNKSASRMSIIRDG-----KTIKSYLIAMGDAPNGHKLK 81 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--- 146 GD++ P+G Y++ + +S ++ SI+I +PNE DK G +MIHGE Sbjct: 82 EGDQRTPQGRYFLDYK--KSDSAFYKSIHISYPNEEDKLRADALGISPGGMIMIHGENPK 139 Query: 147 -----------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ NK+M E++ ++ I+ +P Sbjct: 140 STLPPEEAQKYNWTNGCIAVTNKEMDELWRMIE--------PGTPIEIWP 181 >gi|119713560|gb|ABL97612.1| ErfK/YbiS/YcfS/YnhG family protein [uncultured marine bacterium EB0_39F01] Length = 160 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 36/174 (20%) Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71 + +GC +S ++ + + I + K++ L ++ + Sbjct: 1 MAFIFSGCFNSSTVYKSIPNYNGPKITK--------------IVVNKSQRKLFLFHND-- 44 Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131 ++K++K+ K + GD + PEG Y+I N NSKYFLS+ I +PN D Sbjct: 45 ---KIIKKFKVGLGFNPKSHKSKQGDGRTPEGLYFIDRK--NYNSKYFLSLGISYPNTED 99 Query: 132 KAHNR-----TGADLMIHGEC----------ASAGCYAMNNKQMQEIYAIVRDS 170 K + + G D+ IHG +AGC ++++K M+ IY++V+ Sbjct: 100 KKYAKSLDIDPGGDIFIHGGPRYKGEFGKRDWTAGCISVSDKNMKVIYSMVKAG 153 >gi|254466238|ref|ZP_05079649.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I] gi|206687146|gb|EDZ47628.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium Y4I] Length = 175 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 33/172 (19%) Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73 +FL G + A P+ +I K+ L + E Sbjct: 11 VFLTG-AAWMAWQAFAPRPVPPQATA------VDRIDRILIE--KSARRL---TASRGGE 58 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133 VL E+ I G KI+ GD + PEG + I NPNS Y LS+ I +P D+A Sbjct: 59 TVL--EFPIALGFEPAGDKIQEGDGKTPEGTFRIDRR--NPNSAYHLSLGIDYPQPGDRA 114 Query: 134 HNR-----TGADLMIHGEC------------ASAGCYAMNNKQMQEIYAIVR 168 R G D+ IHG+ +AGC A++N QM+ ++ + Sbjct: 115 RARAAGVSPGGDIFIHGQPNSLGTLITLPGDWTAGCIAVSNDQMETLWRLAE 166 >gi|325123406|gb|ADY82929.1| hypothetical protein BDGL_002343 [Acinetobacter calcoaceticus PHEA-2] Length = 193 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 39/176 (22%) Query: 34 SENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 S + + + + P I +FKN+ +L + K N D ++++Y I G K Sbjct: 33 SHQALSNEEIQEIIKTKPVTSIEVFKNQRLL-LLKSNQD----VIRQYPIRLGFNPKGHK 87 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE- 146 D + PEG Y I W N S Y+ S++I +P+ D A+ + TG D+MIHG Sbjct: 88 HFENDGRTPEGIYSIDWR--NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSV 145 Query: 147 -----------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N + EI+ +V +H +I +P Sbjct: 146 PKSLLSMPFSSTYMPHKDWTLGCIAVRNVDIDEIWQLVP--------NHTKIIIYP 193 >gi|299768812|ref|YP_003730838.1| hypothetical protein AOLE_02820 [Acinetobacter sp. DR1] gi|298698900|gb|ADI89465.1| hypothetical protein AOLE_02820 [Acinetobacter sp. DR1] Length = 193 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 80/209 (38%), Gaps = 40/209 (19%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV-IRIFKN 59 M R I+ L + L + P S + + P I +FK+ Sbjct: 1 MKIRPIIICTLLIVPLGITFYKYEKYLPTFTP-SHQALSREEISDLIKTKPVTSIEVFKS 59 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + IL + K N D +++ Y I G K D + PEG Y I W N S ++ Sbjct: 60 QRIL-LLKSNQD----VIRRYPIRLGLNPKGHKHFENDGKTPEGIYSIDWR--NSQSVFY 112 Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGE------------------CASAGCYAMN 156 S++I +P+ D A+ + TG D+MIHG + GC A+ Sbjct: 113 KSLHISYPDMKDIAYAKQHNQPTGGDIMIHGSVPKSFLSMPFSSTYMPHKDWTLGCIAVR 172 Query: 157 NKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 N + EI+ V +H +I +P Sbjct: 173 NTDIDEIWQFVP--------NHTKIIIYP 193 >gi|209546383|ref|YP_002278273.1| hypothetical protein Rleg2_6003 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209539240|gb|ACI59173.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 179 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 38/189 (20%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + L + + + P + + IR++K+E Sbjct: 1 MRKKLIALAIVIVSLFTYTKLMARIGSGSPPPDAPLAQQADS-----------IRVYKSE 49 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + + K + V + Y+I GPK GDE+ PEG Y I W NP S Sbjct: 50 RRMVLLKGD-----VPISTYRISLGKAADAGPKQREGDEKTPEGHYEIDWR--NPKSMAH 102 Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQM 160 LS++I +P+ D+ + G ++MIHG + GC A+ N +M Sbjct: 103 LSLHISYPSPDDQRNAAAGSFPPGGNIMIHGLPNGWGLFRQAHRLWDWTDGCIAVTNAEM 162 Query: 161 QEIYAIVRD 169 ++I+A V D Sbjct: 163 RDIWARVPD 171 >gi|254452444|ref|ZP_05065881.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238] gi|198266850|gb|EDY91120.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238] Length = 162 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 41/180 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R A L C + T + + K Sbjct: 1 MNRRIF-TSAAALFALTACSSEFRVYTGP--------------------AVTSVVVQKGR 39 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + ++ N +L++Y G K GD + PEG Y+I NPNS ++L Sbjct: 40 RKMFLFHNN-----EVLEQYDFELGFAPTGHKEVEGDGRTPEGAYFIDRK--NPNSSFYL 92 Query: 121 SINIGFPNEFDKAH----NR-TGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 SI I +PN D+A + G D+ IHG +AGC A+ +++M++IYA+V Sbjct: 93 SIGISYPNAADRARARAMGKSPGGDIFIHGTPRASLNRDDWTAGCLAVKDREMEDIYAMV 152 >gi|126665583|ref|ZP_01736565.1| hypothetical protein MELB17_23360 [Marinobacter sp. ELB17] gi|126630211|gb|EBA00827.1| hypothetical protein MELB17_23360 [Marinobacter sp. ELB17] Length = 187 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 27/185 (14%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 LF L L ++L L T + + K E L++ Sbjct: 3 LGRLFVLCSLLLTLLTPQALASDLLARADTRLPFPHSSDIDQLPSITKVLVQKGERSLQL 62 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 ++++Y+I G K+ GD + PEG Y + W N S ++ SI+I Sbjct: 63 LSGE-----QVIRQYRISLGDNPLGHKLYEGDSRTPEGEYSLDWR--NAGSSFYKSIHIS 115 Query: 126 FPNEFDKAHNR-----TGADLMIHGEC---------------ASAGCYAMNNKQMQEIYA 165 +P+ D+ G +MIHG + GC A++N+++ EI+ Sbjct: 116 YPSAKDREMAENWGLNPGGSIMIHGLPNGTDDDFAFAFFGLDWTDGCIAVSNQEIDEIWQ 175 Query: 166 IVRDS 170 +V D Sbjct: 176 LVSDG 180 >gi|301167780|emb|CBW27364.1| putative exported protein [Bacteriovorax marinus SJ] Length = 171 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 33/146 (22%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 + + K+ ++E+ +D + +++ Y + GPK++ GD + PEG Y I W Sbjct: 25 VRVEVRKSNRVMEL----IDHKGEVIRTYDVMLGQSPIGPKVQRGDNKTPEGKYKINWR- 79 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------------------- 145 NP S YFLS++I +PN+ D+ ++R G ++ IHG Sbjct: 80 -NPKSSYFLSLHISYPNKEDRQNSRDLGVDPGDNIFIHGLPNKIQRLSSFERRIAESILL 138 Query: 146 -ECASAGCYAMNNKQMQEIYAIVRDS 170 + GC A++NK MQEI+ +V + Sbjct: 139 STDWTNGCIAVSNKDMQEIWDLVPNG 164 >gi|218672529|ref|ZP_03522198.1| hypothetical protein RetlG_13267 [Rhizobium etli GR56] Length = 179 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 38/189 (20%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + +L + + P + + +IR++K+E Sbjct: 1 MRTKLIVLALVAISLFAYTKVMARIGSGSPSPDAPLEQRA-----------DLIRVYKSE 49 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + + + + + Y+I GPK GDE+ PEG Y I W NP S Sbjct: 50 RRMVLLRAD-----APIATYRISLGRAADAGPKQREGDEKTPEGRYEIDWR--NPKSMAH 102 Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQM 160 LS++I +P ++ + G ++MIHG + GC A+ N +M Sbjct: 103 LSLHISYPKPEEQRAAQVNGFPPGGNIMIHGLPNGWGLLGDVHRLLDWTDGCIAVTNAEM 162 Query: 161 QEIYAIVRD 169 ++I+A V D Sbjct: 163 RDIWARVPD 171 >gi|293611082|ref|ZP_06693381.1| predicted protein [Acinetobacter sp. SH024] gi|292826734|gb|EFF85100.1| predicted protein [Acinetobacter sp. SH024] Length = 178 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 39/176 (22%) Query: 34 SENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 S + + + + P I +FKN+ +L + K N D ++++Y I G K Sbjct: 18 SHQALSNEEIQEIIKTKPVTSIEVFKNQRLL-LLKSNQD----VIRQYPIRLGFNPKGHK 72 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE- 146 D + PEG Y I W N S Y+ S++I +P+ D A+ + TG D+MIHG Sbjct: 73 HFENDGRTPEGIYSIDWR--NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSV 130 Query: 147 -----------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N + EI+ +V +H +I +P Sbjct: 131 PKSLLSMPFSSTYMPHKDWTLGCIAVRNVDIDEIWQLVP--------NHTKIIIYP 178 >gi|227821108|ref|YP_002825078.1| lipoprotein, putative [Sinorhizobium fredii NGR234] gi|227340107|gb|ACP24325.1| lipoprotein, putative [Sinorhizobium fredii NGR234] Length = 200 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 26/134 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K +L++++ LL+E+ I G K++ GD + PEG Y + W N Sbjct: 65 VVVHKERRVLQLFQGE-----RLLREFPIALGGNPVGDKLQEGDRRTPEGLYVLDWR--N 117 Query: 114 PNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYA 154 S ++ S+++ +P D G +MIHG+ + GC A Sbjct: 118 DASSFYRSMHVSYPAPEDVQAAAAKVVDPGGMIMIHGQPNYLGWLAFLTQMFDWTDGCIA 177 Query: 155 MNNKQMQEIYAIVR 168 + N +M EI+ +V Sbjct: 178 VTNAEMDEIWDMVP 191 >gi|254225243|ref|ZP_04918856.1| conserved hypothetical protein [Vibrio cholerae V51] gi|125622342|gb|EAZ50663.1| conserved hypothetical protein [Vibrio cholerae V51] Length = 194 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 50 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 104 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ + G D+ IHG Sbjct: 105 YLLDFII--EDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNSDEREPSFVQS 162 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 163 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 192 >gi|297579707|ref|ZP_06941634.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535353|gb|EFH74187.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 194 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 50 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 104 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ + G D+ IHG Sbjct: 105 YLLDFII--EDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQS 162 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 163 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 192 >gi|153214388|ref|ZP_01949359.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124115337|gb|EAY34157.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 194 Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 50 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 104 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ G D+ IHG Sbjct: 105 YLLDFII--EDSSFYRSIHISYPNTRDQQLAHLRGVNPGGDIKIHGLKNGDEREPSFVQS 162 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 163 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 192 >gi|126734435|ref|ZP_01750182.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2] gi|126717301|gb|EBA14165.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2] Length = 121 Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 15/108 (13%) Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 LL YKI G K++ GD + PEG Y + NPNS + LS+ I +P+ D A Sbjct: 9 LLSSYKIDLGFAPVGHKVQEGDGRTPEGGYRVDRR--NPNSSFHLSLGISYPDANDIASA 66 Query: 136 R-----TGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170 R G D+ IHG + GC A+ N QM E+YA+V Sbjct: 67 RAKGVNPGGDIFIHGTPAVWERTPDWTWGCIAVTNDQMDEVYAMVNTG 114 >gi|117921827|ref|YP_871019.1| hypothetical protein Shewana3_3390 [Shewanella sp. ANA-3] gi|117614159|gb|ABK49613.1| conserved hypothetical protein [Shewanella sp. ANA-3] Length = 157 Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 26/143 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K+E+ + + ++KEY + + G K + GDE+ PEG Y + + Sbjct: 21 LVKVDKSESKMYLLDGE-----QVIKEYHVAFGANPKGHKQKEGDEKTPEGSYTLDYK-- 73 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ +++I +PN D+A+ + G +M+HG+ + GC Sbjct: 74 KEDSSFYRAMHINYPNAQDEANAKKLGVSPGGFIMVHGQRNKLGWLSFITQRFNWTNGCI 133 Query: 154 AMNNKQMQEIYAIVRDSLRGNMQ 176 A+ N +M E +V + +Q Sbjct: 134 ALTNSEMDEFMELVNVGTKIEIQ 156 >gi|327485387|gb|AEA79793.1| Uncharacterized protein conserved in bacteria [Vibrio cholerae LMA3894-4] Length = 187 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 43 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 97 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ + G D+ IHG Sbjct: 98 YLLDFII--EDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPSFVQS 155 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 156 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 185 >gi|153816794|ref|ZP_01969461.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|227811790|ref|YP_002811800.1| hypothetical protein VCM66_A0162 [Vibrio cholerae M66-2] gi|229506670|ref|ZP_04396179.1| hypothetical protein VCF_001892 [Vibrio cholerae BX 330286] gi|298500021|ref|ZP_07009827.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|126512597|gb|EAZ75191.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|227010932|gb|ACP07143.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|229357021|gb|EEO21939.1| hypothetical protein VCF_001892 [Vibrio cholerae BX 330286] gi|297542002|gb|EFH78053.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 194 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 50 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 104 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ G D+ IHG Sbjct: 105 YLLDFII--EDSSFYRSIHISYPNTRDQQLAHLRGVNPGGDIKIHGLKNGDEREPGFVQS 162 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 163 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 192 >gi|262403345|ref|ZP_06079905.1| hypothetical protein VOA_001335 [Vibrio sp. RC586] gi|262350844|gb|EEY99977.1| hypothetical protein VOA_001335 [Vibrio sp. RC586] Length = 160 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 34/150 (22%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + + N +++EY+I G K + GD++ PEG Y++ + Sbjct: 24 LVKVDKSKRRMYLLQGN-----EVIREYRIALGKSPKGHKQQEGDQRTPEGHYFLDFII- 77 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ SI+I +PN D+ + G D+ IHG + GC Sbjct: 78 -DDSSFYRSIHISYPNARDQQLAQLRGVNPGGDIKIHGLKNSDEREPAFVQSFDWTNGCI 136 Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 A+ N++M E ++V Q I IQ Sbjct: 137 AITNQEMDEFLSLV--------QPGIPIQI 158 >gi|312962870|ref|ZP_07777357.1| hypothetical protein PFWH6_4793 [Pseudomonas fluorescens WH6] gi|311282897|gb|EFQ61491.1| hypothetical protein PFWH6_4793 [Pseudomonas fluorescens WH6] Length = 167 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 71/188 (37%), Gaps = 48/188 (25%) Query: 3 NRYNILLFALFIF-LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R+ + L L L+ ++L K + + K+ + Sbjct: 1 MRWLLALICLSFATLSPASTPQTLGGKTVEK---------------------VLVLKSAH 39 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L++ K Y+I G K+ GD + PEG Y+I W + ++ L+ Sbjct: 40 QLQLINDG-----KPFKTYRISLGKNPKGHKLIEGDRRTPEGLYWIDWR--KTSDRFNLA 92 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A R G+ +MIHG + GC M N M+E Sbjct: 93 MHISYPNISDAARARREGVKPGSMIMIHGTPDTEDYPEQWFHTLDWTDGCIGMRNVDMRE 152 Query: 163 IYAIVRDS 170 ++ +V+D Sbjct: 153 VWNLVKDG 160 >gi|189499065|ref|YP_001958535.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium phaeobacteroides BS1] gi|189494506|gb|ACE03054.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium phaeobacteroides BS1] Length = 192 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 34/151 (22%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + K E +L ++ +K Y+I G K+ GD + PEG Y I N Sbjct: 57 LVAQKGERLLHLYSGGAA-----VKSYRIALGFNPVGAKLRQGDGKTPEGRYSISER--N 109 Query: 114 PNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYA 154 P S Y LS+ I +P+ D+ G D+ IHG + GC A Sbjct: 110 PQSSYHLSLRISYPDTKDRNRAGKAGVSPGGDIFIHGWPDSIVRKHASPPAGDWTQGCIA 169 Query: 155 MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + N +++E++ V + +P Sbjct: 170 VTNDEIEELWKAVPVGT--------PVIIYP 192 >gi|229592409|ref|YP_002874528.1| hypothetical protein PFLU5023 [Pseudomonas fluorescens SBW25] gi|229364275|emb|CAY52000.1| putative exported protein [Pseudomonas fluorescens SBW25] Length = 167 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 48/188 (25%) Query: 3 NRYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R+ + L L F+ L+ +L K + + K+ + Sbjct: 1 MRWLLALICLSFVTLSSASTVETLGGKTVEK---------------------VLVLKSAH 39 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L++ K Y+I G K+ GD + PEG Y+I W + ++ L+ Sbjct: 40 QLQLINDG-----KPFKTYRISLGKNPKGHKLIEGDRRTPEGLYWIDWRKTSE--RFNLA 92 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQE 162 ++I +PN D A R G+ +MIHG + GC M N M+E Sbjct: 93 MHISYPNISDAARARREGVKPGSMIMIHGTPDTEDYPEQWFHTLDWTDGCIGMRNVDMRE 152 Query: 163 IYAIVRDS 170 ++ +V+D Sbjct: 153 VWTLVKDG 160 >gi|87200697|ref|YP_497954.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444] gi|87136378|gb|ABD27120.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444] Length = 167 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 23/151 (15%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIET 95 + S P +R+ K+ L + + L+ + I G K Sbjct: 16 VQASASANEIRPEDIASVRVEKSARRLLLLDADG----ATLRSFSNIQLGDAPLGHKRFE 71 Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK----AHNR-TGADLMIHGEC--- 147 GDE+ PEG Y I + N S Y LS++I +P+ D+ A R G + IHG+ Sbjct: 72 GDERTPEGRYVID--HGNARSAYHLSLHISYPDASDRAYAEARGRSPGGQIFIHGQPNSL 129 Query: 148 --------ASAGCYAMNNKQMQEIYAIVRDS 170 + GC A++N ++ EI+A+V D Sbjct: 130 ASGRIEGDWTDGCIALSNAEIDEIWALVGDG 160 >gi|262281096|ref|ZP_06058878.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter calcoaceticus RUH2202] gi|262257327|gb|EEY76063.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter calcoaceticus RUH2202] Length = 181 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 39/176 (22%) Query: 34 SENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 S + + + P I +FKN+ IL + K N D +++ Y I G K Sbjct: 21 SHKALSTEEIFELIKTKPITSIEVFKNQRIL-LLKSNQD----VIRRYPIRLGFNPEGHK 75 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE- 146 D + PEG Y I W N S Y+ S++I +P+ D A+ + TG D+MIHG Sbjct: 76 HFENDGKTPEGVYSIDWR--NSQSAYYKSLHISYPDAKDIAYAKQHNQPTGGDIMIHGSV 133 Query: 147 -----------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + GC A+ N + EI+ V +H +I +P Sbjct: 134 PKSLISMPFSSTYMPHKDWTLGCIAVRNADIDEIWQFVP--------NHTKIIIYP 181 >gi|153830346|ref|ZP_01983013.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148874189|gb|EDL72324.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 194 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 50 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 104 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D + G D+ IHG Sbjct: 105 YLLDFII--EDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQS 162 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 163 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 192 >gi|121728201|ref|ZP_01681235.1| conserved hypothetical protein [Vibrio cholerae V52] gi|254286657|ref|ZP_04961612.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|121629524|gb|EAX61948.1| conserved hypothetical protein [Vibrio cholerae V52] gi|150423241|gb|EDN15187.1| conserved hypothetical protein [Vibrio cholerae AM-19226] Length = 194 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 50 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 104 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D + G D+ IHG Sbjct: 105 YLLDFII--EDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQS 162 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 163 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 192 >gi|147672199|ref|YP_001215949.1| hypothetical protein VC0395_1113 [Vibrio cholerae O395] gi|262167801|ref|ZP_06035502.1| hypothetical protein VIJ_000972 [Vibrio cholerae RC27] gi|146314582|gb|ABQ19122.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227014791|gb|ACP11000.1| conserved hypothetical protein [Vibrio cholerae O395] gi|262023709|gb|EEY42409.1| hypothetical protein VIJ_000972 [Vibrio cholerae RC27] Length = 160 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 16 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 70 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ G D+ IHG Sbjct: 71 YLLDFII--EDSSFYRSIHISYPNTRDQQLAHLRGVNPGGDIKIHGLKNGDEREPSFVQS 128 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 129 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 158 >gi|229526209|ref|ZP_04415613.1| hypothetical protein VCA_000324 [Vibrio cholerae bv. albensis VL426] gi|229527855|ref|ZP_04417246.1| hypothetical protein VCG_000929 [Vibrio cholerae 12129(1)] gi|229334217|gb|EEN99702.1| hypothetical protein VCG_000929 [Vibrio cholerae 12129(1)] gi|229336367|gb|EEO01385.1| hypothetical protein VCA_000324 [Vibrio cholerae bv. albensis VL426] Length = 160 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 68/158 (43%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 16 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 70 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ + G D+ IHG Sbjct: 71 YLLDFII--EDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPSFVQS 128 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 129 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 158 >gi|119382801|ref|YP_913857.1| hypothetical protein Pden_0044 [Paracoccus denitrificans PD1222] gi|119372568|gb|ABL68161.1| conserved hypothetical protein [Paracoccus denitrificans PD1222] Length = 188 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 27/137 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNL 112 I + K + + + + + +LK Y+I S G K GDE+ PEG Y I W Sbjct: 48 IVVSKGDKTMYLLRGD-----RILKTYRIAMGSNWNQGHKQREGDERTPEGTYRIDWR-- 100 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCY 153 NP S LS+++ +PN D R G ++MIHG + GC Sbjct: 101 NPRSIAHLSLHVSYPNAEDSERARQAGYSPGGNIMIHGLPNGWGAMGRLHRLLDWTDGCI 160 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N +M+EI+++ + Sbjct: 161 AVTNDEMREIWSLTPNG 177 >gi|121587991|ref|ZP_01677744.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121547789|gb|EAX57878.1| conserved hypothetical protein [Vibrio cholerae 2740-80] Length = 197 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N ++ EY+I G K + GD++ PEG Sbjct: 53 NLSYAQVDLVKVDKSKRRMYLLQGN-----EVISEYRIALGKSPKGHKQQEGDQRTPEGH 107 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ + G D+ IHG Sbjct: 108 YLLDFII--EDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPSFVQS 165 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 166 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 195 >gi|152991674|ref|YP_001357395.1| hypothetical protein SUN_0078 [Sulfurovum sp. NBC37-1] gi|151423535|dbj|BAF71038.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 196 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 32/197 (16%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV---IRIF 57 + N + + +F++GC R+ P + T + I ++ Sbjct: 2 IKNIVLLSILGTAVFISGCGEPRAYGKVDNTPYAIGECRQELSHGTDVDQGKLADKIVVY 61 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAW-SGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 K + L ++++ LL KI +G G KI+ GD + PEG Y+I +P Sbjct: 62 KKKRKLSMYRQG-----KLLYACKISLGKNGDKGNKIQAGDYRTPEGSYWIVRKKCDP-- 114 Query: 117 KYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----------------ASAGCYAM 155 + + S+ I +PNE DKA R G + IHG+ + GC A+ Sbjct: 115 RLYKSLMISYPNEADKARARAHGAKPGGYITIHGQPKWNADGHADRYTLAHDWTEGCMAV 174 Query: 156 NNKQMQEIYAIVRDSLR 172 NK + ++ V++ ++ Sbjct: 175 PNKAIDTLWRSVKNGVK 191 >gi|254505691|ref|ZP_05117837.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16] gi|219551344|gb|EED28323.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16] Length = 159 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 26/134 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + +++EY++ G K + GD++ PEG YY+ + Sbjct: 23 LVKVDKSKRRMYLMDGK-----EVVREYRVALGQSPKGHKRQEGDQKTPEGRYYLDFVI- 76 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S+Y+ SI+I +PN D+ + R G D+ IHG + GC Sbjct: 77 -EDSQYYKSIHISYPNLRDRTYARVHNLDPGGDIKIHGLKNGERRPANYVQSFDWTDGCI 135 Query: 154 AMNNKQMQEIYAIV 167 A+ N++M E+ ++V Sbjct: 136 AITNQEMDELLSLV 149 >gi|99078481|ref|YP_611739.1| hypothetical protein TM1040_3505 [Ruegeria sp. TM1040] gi|99035619|gb|ABF62477.1| hypothetical protein TM1040_3505 [Ruegeria sp. TM1040] Length = 186 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + K+ L + + ++ Y I + G K GDE+ PEG Y I W N Sbjct: 49 ILVIKSTRALHLLRDGET-----IRSYDISLGAAPEGHKQSEGDERTPEGRYEIDWR--N 101 Query: 114 PNSKYFLSINIGFPN-----EFDKAHNRTGADLMIHGEC--------------ASAGCYA 154 PNS LS++I +PN A G ++MIHG + GC A Sbjct: 102 PNSIAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMLDWTDGCIA 161 Query: 155 MNNKQMQEIYAIVRDS 170 + N +M+EI+++V D Sbjct: 162 VTNAEMREIWSLVPDG 177 >gi|241760216|ref|ZP_04758312.1| ErfK/YbiS/YcfS/YnhG [Neisseria flavescens SK114] gi|241319327|gb|EER55792.1| ErfK/YbiS/YcfS/YnhG [Neisseria flavescens SK114] Length = 182 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 26/134 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K++ + + + LLK Y I G K GD + PEG Y I N Sbjct: 47 LVVHKSKRTMSAYSQG-----RLLKTYPISLGKQPVGHKQFEGDGKTPEGKYRINER--N 99 Query: 114 PNSKYFLSINIGFPNEFDK----AHNR-TGADLMIHG--------------ECASAGCYA 154 PNS Y ++ + +PNE DK A + G + IHG + + GC A Sbjct: 100 PNSGYHKNLGVSYPNEADKAYAAAQGKSPGGLIKIHGMKNGWGFIGKKHLQKDWTNGCIA 159 Query: 155 MNNKQMQEIYAIVR 168 + ++++ E+Y V+ Sbjct: 160 VTDEEVDELYRSVK 173 >gi|114762228|ref|ZP_01441696.1| ErfK/YbiS/YcfS/YnhG family protein [Pelagibaca bermudensis HTCC2601] gi|114545252|gb|EAU48255.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. HTCC2601] Length = 133 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 27/121 (22%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK-- 132 +LK Y I G K GD + PEG Y+I NPNS + LS+ I +PN D+ Sbjct: 8 KVLKSYDIGLGFQPQGHKQFEGDGKTPEGLYFIDRR--NPNSSFHLSLGISYPNPNDRAF 65 Query: 133 --AHNR-TGADLMIHGEC--------------------ASAGCYAMNNKQMQEIYAIVRD 169 A + G D+ IHG + GC A+++ Q++ IYA+V+ Sbjct: 66 AAAAGKSPGGDIFIHGGPPKDRKRLGGGDWMTKGNSVDWTWGCIAVSDDQIEHIYAMVKT 125 Query: 170 S 170 Sbjct: 126 G 126 >gi|229522834|ref|ZP_04412248.1| hypothetical protein VIF_003402 [Vibrio cholerae TM 11079-80] gi|229340051|gb|EEO05059.1| hypothetical protein VIF_003402 [Vibrio cholerae TM 11079-80] Length = 160 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 34/158 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 16 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 70 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D + G D+ IHG Sbjct: 71 YLLDFII--EDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQS 128 Query: 147 -CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC A+ N++M E ++V Q + I Sbjct: 129 FDWTNGCIAITNQEMDEFLSLV--------QPGVPIHI 158 >gi|29654462|ref|NP_820154.1| putative lipoprotein [Coxiella burnetii RSA 493] gi|153211349|ref|ZP_01947691.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177'] gi|154707148|ref|YP_001424614.1| hypothetical protein CBUD_1254 [Coxiella burnetii Dugway 5J108-111] gi|161830363|ref|YP_001597027.1| putative lipoprotein [Coxiella burnetii RSA 331] gi|212218590|ref|YP_002305377.1| hypothetical protein CbuK_1024 [Coxiella burnetii CbuK_Q154] gi|29541729|gb|AAO90668.1| hypothetical exported protein [Coxiella burnetii RSA 493] gi|120575062|gb|EAX31686.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177'] gi|154356434|gb|ABS77896.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111] gi|161762230|gb|ABX77872.1| putative lipoprotein [Coxiella burnetii RSA 331] gi|212012852|gb|ACJ20232.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154] Length = 233 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 22/195 (11%) Query: 10 FALFIFLNGCHH--------SRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNE 60 L + GC S I K +NL ++ S P + +FKN Sbjct: 17 ILLTLTFTGCASIHHGPQRSMSSAISKYRGYAFKNLGPYFKRAGVSYPPKDISLLVFKNS 76 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + +++W ++ + ++ + I A SG GPK+ GD Q PEG Y I NP S++ L Sbjct: 77 HRVQLWAKDR-GPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIVG--FNPASRFDL 133 Query: 121 SINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGN 174 S+ + +PN D+ + R G D+ IHG AS GC + NK +++++ + Sbjct: 134 SLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGCIPIGNKAIEQLFVLA----YLV 189 Query: 175 MQSHIQIQAFPFRMT 189 + HI++ P + Sbjct: 190 GERHIKVIIAPDDLR 204 >gi|163751492|ref|ZP_02158715.1| hypothetical protein KT99_14104 [Shewanella benthica KT99] gi|161328613|gb|EDP99763.1| hypothetical protein KT99_14104 [Shewanella benthica KT99] Length = 127 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 21/115 (18%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134 +L+ Y I G K++ GD++ PEG Y + + +S Y+ +I+I +PNE D+ Sbjct: 8 KVLRRYHIALGDRPLGHKLQEGDQRTPEGRYTLDYK--KSDSAYYRAIHISYPNEEDQLR 65 Query: 135 NR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170 R G +MIHG+ + GC A+ N QM E++ + + Sbjct: 66 ARALGIQPGGQIMIHGQNPRSSLSAAEAQQYNWTDGCIAITNPQMDELWRAIDEG 120 >gi|259415196|ref|ZP_05739118.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter sp. TrichCH4B] gi|259349106|gb|EEW60860.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter sp. TrichCH4B] Length = 186 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + K+ L + ++ ++ Y I + G K GDE+ PEG Y I W N Sbjct: 49 ILVIKSTRALHLLRQGET-----IRSYDISLGAAPEGHKQSEGDERTPEGRYKIDWR--N 101 Query: 114 PNSKYFLSINIGFPN-----EFDKAHNRTGADLMIHGEC--------------ASAGCYA 154 PNS LS++I +PN A G ++MIHG + GC A Sbjct: 102 PNSVAHLSLHISYPNAADQAAAKAAARDPGGNIMIHGLPNGWGALGALHLMRDWTDGCIA 161 Query: 155 MNNKQMQEIYAIVRDS 170 + N +M+EI+++V + Sbjct: 162 VTNAEMREIWSLVPNG 177 >gi|70728465|ref|YP_258214.1| hypothetical protein PFL_1083 [Pseudomonas fluorescens Pf-5] gi|68342764|gb|AAY90370.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 167 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K+ + L++ LK Y+I GPK+ GD++ PEG Y++ W Sbjct: 32 VLVLKSAHQLQLINGG-----KPLKTYRISLGKKPKGPKLMEGDKRTPEGLYWLDWR--K 84 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYA 154 + +Y L+++I +PN D A +R G +MIHG + GC A Sbjct: 85 TSDRYNLAMHISYPNITDAARSRREGVDPGGMIMIHGTPDTEEFPEQYFHTLDWTDGCIA 144 Query: 155 MNNKQMQEIYAIVRDS 170 M N M+E++ +V+D Sbjct: 145 MRNVDMREVWGLVKDG 160 >gi|260777335|ref|ZP_05886229.1| hypothetical protein VIC_002729 [Vibrio coralliilyticus ATCC BAA-450] gi|260607001|gb|EEX33275.1| hypothetical protein VIC_002729 [Vibrio coralliilyticus ATCC BAA-450] Length = 154 Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + ++KE++I G K + GD + PEG YY+ + Sbjct: 18 LVKVDKSKRRMYLIDNG-----QVVKEFRIALGKHPKGHKTQEGDHRTPEGRYYLDFVI- 71 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153 NS+++ SI+I +PN D A+ G D+ IHG + GC Sbjct: 72 -DNSEFYRSIHISYPNPRDIAYAAKLRVDPGGDIKIHGLRNGEKRPAKFVQSFDWTNGCI 130 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N++M E+ +V+ Sbjct: 131 AITNEEMDELLTLVKTG 147 >gi|329120497|ref|ZP_08249162.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC BAA-1200] gi|327461955|gb|EGF08285.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC BAA-1200] Length = 235 Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 26/156 (16%) Query: 33 LSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 LS +Q+ P + + K+ ++ + D LLK Y + G Sbjct: 77 LSPRRQTLLQQPALPPDTEIAKLVVRKSAREMDAY----DHSGRLLKTYPVALGRAPVGH 132 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN----EFDKAHNR-TGADLMIHG- 145 K GD + PEG Y I NP+S Y ++ + +PN A R G D+ IHG Sbjct: 133 KQFEGDGKTPEGRYTISGR--NPHSGYHKNLGVSYPNRADRARAAAQGRSPGGDIKIHGL 190 Query: 146 -------------ECASAGCYAMNNKQMQEIYAIVR 168 + GC A+ ++++ E+YA+V Sbjct: 191 KNGLGAIGAQHLRRDWTDGCIAVTDREIDELYALVE 226 >gi|261414486|ref|YP_003248169.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261370942|gb|ACX73687.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326024|gb|ADL25225.1| ErfK/YbiS/YcfS/YnhG family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 174 Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 29/154 (18%) Query: 39 ISMQKKRTSPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 + + P I + K + + + E ++K YKI G K+++GD Sbjct: 21 SEKESPKVMLTSPVDNILVEKAKRQMHL----RSGE-NIVKTYKISLGKNPVGAKVKSGD 75 Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----- 147 + PEG Y I + NP S + LS+ + +PN + G D+MIHG Sbjct: 76 NKTPEGNYTIERH--NPKSIFHLSLKVSYPNAEQIKAAKEGNYEPGGDIMIHGYPNKIPA 133 Query: 148 -----------ASAGCYAMNNKQMQEIYAIVRDS 170 +AGC A+ N +++EIY V+D Sbjct: 134 FLFKFWHKWKDWTAGCIAVTNDEIEEIYDAVKDG 167 >gi|310780465|ref|YP_003968797.1| ErfK/YbiS/YcfS/YnhG family protein [Ilyobacter polytropus DSM 2926] gi|309749788|gb|ADO84449.1| ErfK/YbiS/YcfS/YnhG family protein [Ilyobacter polytropus DSM 2926] Length = 164 Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 20/129 (15%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K+ + + N ++K Y I G K ++GD + PEG Y + + Sbjct: 33 LVKVDKSSKKMFLMSGN-----QVIKIYDISLGIDPIGHKGKSGDNKTPEGIYTLDYK-- 85 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------ASAGCYAMNNKQ 159 N S Y+ SI+I +PNE DKA G D+ IHG+ + GC + N++ Sbjct: 86 NSQSIYYKSIHISYPNEKDKAAAAQKGWDPGGDITIHGQKKGSLSKEEWTEGCIGVTNEE 145 Query: 160 MQEIYAIVR 168 M EI+ +++ Sbjct: 146 MDEIWELLQ 154 >gi|212212447|ref|YP_002303383.1| hypothetical protein CbuG_0852 [Coxiella burnetii CbuG_Q212] gi|212010857|gb|ACJ18238.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212] Length = 233 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 22/195 (11%) Query: 10 FALFIFLNGCHH--------SRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNE 60 L + GC S I K +NL ++ S P + +FKN Sbjct: 17 ILLTLTFTGCASIHHGPQRSMSSAISKYRGYAFKNLGPCFKRAGVSYPPKDISLLVFKNS 76 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + +++W ++ + ++ + I A SG GPK+ GD Q PEG Y I NP S++ L Sbjct: 77 HRVQLWAKDR-GPWRYIRSFPILASSGGPGPKLHDGDHQVPEGVYKIVG--FNPASRFDL 133 Query: 121 SINIGFPNEFDKAHNR------TGADLMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGN 174 S+ + +PN D+ + R G ++ IHG AS GC + NK +++++ + Sbjct: 134 SLMLNYPNSADRYYARLDHRHDLGDNIFIHGSDASIGCIPIGNKAIEQLFVLA----YLV 189 Query: 175 MQSHIQIQAFPFRMT 189 + HI++ P + Sbjct: 190 GERHIKVIIAPDDLR 204 >gi|153802363|ref|ZP_01956949.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124122082|gb|EAY40825.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 194 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 26/143 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 50 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 104 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D+ + G D+ IHG Sbjct: 105 YLLDFII--EDSSFYRSIHISYPNTRDQQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQS 162 Query: 147 -CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ N++M E ++V+ Sbjct: 163 FDWTNGCIAITNQEMDEFLSLVQ 185 >gi|71906556|ref|YP_284143.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] gi|71846177|gb|AAZ45673.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 431 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 17/149 (11%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV--DAEYVLLKEYKICAW 85 KA + + P I + + L +++ + D + +Y I Sbjct: 143 KAYREKPPADFVPRYLLQMQPDQRYAIVVDTKRSRLYLYENDTKHDGRPRFVADYYITH- 201 Query: 86 SGTFG-PKIETGDEQAPEGFYYIG---WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL 141 G G K+ GD++ P G Y++ + + + +PNE+DK R G+ + Sbjct: 202 -GKLGAEKLVEGDKKTPVGVYHVTANLPKQKLADLYGTGAYPLNYPNEWDKRQGRGGSGI 260 Query: 142 MIHGECA---------SAGCYAMNNKQMQ 161 +HG + S GC + N+ + Sbjct: 261 WLHGTPSNTFARPPRASDGCVVLTNQDLD 289 >gi|119945545|ref|YP_943225.1| hypothetical protein Ping_1849 [Psychromonas ingrahamii 37] gi|119864149|gb|ABM03626.1| conserved hypothetical protein [Psychromonas ingrahamii 37] Length = 166 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 52/189 (27%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M N + I+LF + + G + PL++ + + K++ Sbjct: 4 MKNLFIIILF-MLPLIAGANT--------LLPLADQ-----------------VVVEKSK 37 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + K+ V+ +EY I G K + GD++ PEG Y I + NP S+++L Sbjct: 38 RKMYLIKQG-----VVYREYPIALGYRPIGHKGKEGDKRTPEGRYIIDYR--NPESRFYL 90 Query: 121 SINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQ 161 S++I +P+E D G ++ IHG+ + GC A+ N+ ++ Sbjct: 91 SLHINYPSEKDLQSAADNNVSPGGEIFIHGQPNNTKHHPSKFRGRDWTDGCIAITNQDIK 150 Query: 162 EIYAIVRDS 170 + + +V+D Sbjct: 151 QFWTLVKDG 159 >gi|27367809|ref|NP_763336.1| hypothetical protein VV2_1455 [Vibrio vulnificus CMCP6] gi|27359382|gb|AAO08326.1|AE016813_78 Uncharacterized protein conserved in bacteria [Vibrio vulnificus CMCP6] Length = 161 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 +++ K++ L + +++EY+I G K++ GD++ PEG Y + + + Sbjct: 26 VKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VT 78 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154 S ++ S++I +PN D + G D+ +HG + GC A Sbjct: 79 EESAFYRSVHISYPNPIDSLLAKEKGLSPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIA 138 Query: 155 MNNKQMQEIYAIVRDS 170 + N++M E +V+ Sbjct: 139 LTNQEMDEFIRLVKMG 154 >gi|37675934|ref|NP_936330.1| hypothetical protein VVA0274 [Vibrio vulnificus YJ016] gi|37200474|dbj|BAC96300.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus YJ016] Length = 161 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 +++ K++ L + +++EY+I G K++ GD++ PEG Y + + + Sbjct: 26 VKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VT 78 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154 S ++ S++I +PN D + G D+ +HG + GC A Sbjct: 79 EESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIA 138 Query: 155 MNNKQMQEIYAIVRDS 170 + N++M E +V+ Sbjct: 139 LTNQEMDEFIRLVKMG 154 >gi|262275516|ref|ZP_06053326.1| hypothetical protein VHA_002498 [Grimontia hollisae CIP 101886] gi|262220761|gb|EEY72076.1| hypothetical protein VHA_002498 [Grimontia hollisae CIP 101886] Length = 139 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 26/135 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K+ + + + + ++K Y I + G K+ GD++ PEG Y + + + Sbjct: 3 LVKVDKSARKMYLIQGD-----RIVKRYHISLGANPKGHKLREGDQRTPEGHYLLDF--I 55 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 N S+++ SI I +PNE D + G +MIHG+ + GC Sbjct: 56 NEKSRFYRSIRINYPNENDVKRAQKLGVNPGGQIMIHGQKNNNDSLPGSGRSKDWTDGCI 115 Query: 154 AMNNKQMQEIYAIVR 168 A+ N+++ E +V+ Sbjct: 116 AITNEEIDEFLRLVK 130 >gi|323499297|ref|ZP_08104274.1| hypothetical protein VISI1226_03725 [Vibrio sinaloensis DSM 21326] gi|323315685|gb|EGA68719.1| hypothetical protein VISI1226_03725 [Vibrio sinaloensis DSM 21326] Length = 159 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ L + +++EY+I G K + GD++ PEG YY+ + Sbjct: 23 LVKVDKSKRRLYLLDGQ-----QVVREYRIALGKSPKGHKQQEGDQKTPEGRYYLDFVL- 76 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S+++ SI+I +PN D+ G D+ IHG + GC Sbjct: 77 -NDSQFYRSIHISYPNLKDRTQAMSNKVDPGGDIKIHGLKNGETRPANYVQSFDWTDGCI 135 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N++M ++ ++V Sbjct: 136 ALTNQEMDDLLSLVSTG 152 >gi|320158079|ref|YP_004190457.1| hypothetical protein VVM_00523 [Vibrio vulnificus MO6-24/O] gi|319933391|gb|ADV88254.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus MO6-24/O] Length = 160 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 26/136 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 +++ K++ L + +++EY+I G K++ GD++ PEG Y + + + Sbjct: 25 VKVDKSKRRLYLMSGE-----EVIREYRIALGKQPKGHKVQEGDQRTPEGIYTLDY--VT 77 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154 S ++ S++I +PN D + G D+ +HG + GC A Sbjct: 78 EESAFYRSVHISYPNPIDSLLAKEKGISPGGDIKVHGLRDGEQRDPRFVQSFDWTNGCIA 137 Query: 155 MNNKQMQEIYAIVRDS 170 + N++M E +V+ Sbjct: 138 LTNQEMDEFIRLVKMG 153 >gi|15600934|ref|NP_232564.1| hypothetical protein VCA0164 [Vibrio cholerae O1 biovar eltor str. N16961] gi|153822669|ref|ZP_01975336.1| conserved hypothetical protein [Vibrio cholerae B33] gi|254850432|ref|ZP_05239782.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|9657554|gb|AAF96077.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126519826|gb|EAZ77049.1| conserved hypothetical protein [Vibrio cholerae B33] gi|254846137|gb|EET24551.1| conserved hypothetical protein [Vibrio cholerae MO10] Length = 194 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 26/143 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 50 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 104 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D + G D+ IHG Sbjct: 105 YLLDFII--EDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQS 162 Query: 147 -CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ N++M E ++V+ Sbjct: 163 FDWTNGCIAITNQEMDEFLSLVQ 185 >gi|91228120|ref|ZP_01262162.1| hypothetical protein V12G01_03532 [Vibrio alginolyticus 12G01] gi|91188238|gb|EAS74538.1| hypothetical protein V12G01_03532 [Vibrio alginolyticus 12G01] Length = 160 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + ++ +LKEY+I + G K E GD + PEG Y + + Sbjct: 24 LVKVDKSKRRMYLMEQG-----AVLKEYRIALGANPQGHKQEEGDNRTPEGEYTLDYVI- 77 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ S++I +P+ D + G ++ IHG + GC Sbjct: 78 -EDSAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTNGCI 136 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N++M E +V Sbjct: 137 AITNEEMDEFIQLVEMG 153 >gi|167644675|ref|YP_001682338.1| hypothetical protein Caul_0707 [Caulobacter sp. K31] gi|167347105|gb|ABZ69840.1| conserved hypothetical protein-like protein [Caulobacter sp. K31] Length = 178 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 69/206 (33%), Gaps = 49/206 (23%) Query: 1 MTNRYNILLFALFIFLNG--CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 M R L G C + A P E I I K Sbjct: 1 MIRRPRFRFGTARAALLGSLCAGIAACTRPAPAPAVE-------------GSVDHILIEK 47 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 + + + + L+ Y+I G PK GD + PEG Y I NP S Y Sbjct: 48 AAHRMTLLAGH-----RPLRTYRISLGRGGLAPKAREGDGRTPEGDYRIAGR--NPKSAY 100 Query: 119 FLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQ 159 LS+ IG+P A R G D+MIHG + GC A+ + + Sbjct: 101 HLSLRIGYPTPAQTADARGRGVDPGGDIMIHGLPNGRGALARYYAGRDWTDGCVAVTDAE 160 Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFP 185 ++EI+ + Q ++ P Sbjct: 161 VEEIWRLT--------QDDARVHIAP 178 >gi|326389097|ref|ZP_08210679.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370] gi|326206697|gb|EGD57532.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370] Length = 174 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 22/133 (16%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + I K L + A ++ Y I GPK GD + PEG Y I W Sbjct: 41 VLIEKGARRLTLLDAEGGA----VRVYDHIRLGWEPVGPKRFEGDGRTPEGHYRIDWGL- 95 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC----------ASAGCYAMNN 157 +S Y LS++I +P D+A+ R G + IHG +AGC A++N Sbjct: 96 -ESSAYHLSLHISYPGPSDQAYARSRGRSPGGAIFIHGWPNGARDAPEGDWTAGCIALDN 154 Query: 158 KQMQEIYAIVRDS 170 +++EI+ +V D Sbjct: 155 AEIEEIWGLVGDG 167 >gi|126738023|ref|ZP_01753744.1| hypothetical protein RSK20926_05802 [Roseobacter sp. SK209-2-6] gi|126720520|gb|EBA17225.1| hypothetical protein RSK20926_05802 [Roseobacter sp. SK209-2-6] Length = 177 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 67/184 (36%), Gaps = 34/184 (18%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L + L A P L+ Q+ I I K+ Sbjct: 1 MLRRALQLS---ALCLTAALGWGLWHAFAPAPSIPTLVEDAQRVDQ-------IVIDKSA 50 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + E VL E+ I G K E GD + PEG + + N NS + L Sbjct: 51 RRL---LASRQGETVL--EFDIALGFEPVGDKAEEGDGKTPEGIFRVNRR--NANSSFHL 103 Query: 121 SINIGFPNEFDKAHN-----RTGADLMIHGEC------------ASAGCYAMNNKQMQEI 163 S+ + +P D G D+ IHG+ +AGC A++N +M+ + Sbjct: 104 SLGLDYPQAEDLQRAEDAGIDPGGDIFIHGQPNAVGGALTLPGDWTAGCIAISNSEMERL 163 Query: 164 YAIV 167 + +V Sbjct: 164 WQLV 167 >gi|291279132|ref|YP_003495967.1| hypothetical protein DEFDS_0732 [Deferribacter desulfuricans SSM1] gi|290753834|dbj|BAI80211.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 168 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 26/135 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + + K+++ + + K +LK + I G K + GDE+ PEG Y++ + Sbjct: 32 YVLVKKSKHKIYLLKSG-----KILKSFHIALGGNPKGAKQKQGDEKTPEGIYFLDYK-- 84 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 N S+Y+ SI+I +PN D + G D+MIHG+ + GC Sbjct: 85 NERSRYYKSIHISYPNTSDVKRAKKMGVSPGGDIMIHGQKKGWGWLSFISQKFDWTKGCI 144 Query: 154 AMNNKQMQEIYAIVR 168 A++NK M I+ +V+ Sbjct: 145 AVSNKDMDVIWKMVK 159 >gi|229514664|ref|ZP_04404125.1| hypothetical protein VCB_002316 [Vibrio cholerae TMA 21] gi|229348644|gb|EEO13602.1| hypothetical protein VCB_002316 [Vibrio cholerae TMA 21] Length = 160 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 26/143 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 16 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 70 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D + G D+ IHG Sbjct: 71 YLLDFII--EDSSFYRSIHISYPNTRDHQLAQLRGVNPGGDIKIHGLKNGDEREPSFVQS 128 Query: 147 -CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ N++M E ++V+ Sbjct: 129 FDWTNGCIAITNQEMDEFLSLVQ 151 >gi|71281133|ref|YP_269221.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H] gi|71146873|gb|AAZ27346.1| ErfK/YbiS/YcfS/YnhG family protein [Colwellia psychrerythraea 34H] Length = 171 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 26/141 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +++I K+E + + + +KEY + G K + GDE+ PEG Y + + Sbjct: 35 LVKIDKSERRMYLLENG-----KTIKEYHVAFGENPKGHKEKEGDEKTPEGIYILDYK-- 87 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ +++I +PN+ D + + G +MIHG+ + GC Sbjct: 88 KEDSSFYRAMHISYPNQADLDNAKIKGFSAGGLIMIHGQRNELAGVSAFTQRFNWTNGCI 147 Query: 154 AMNNKQMQEIYAIVRDSLRGN 174 A+ N +M + ++V+ + + Sbjct: 148 ALTNSEMDQFMSLVKVGTKIH 168 >gi|153834888|ref|ZP_01987555.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio harveyi HY01] gi|148868659|gb|EDL67741.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio harveyi HY01] Length = 160 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + ++KEY+I + G K E GD + PEG Y + + Sbjct: 24 LVKVDKSKRRMYLMDNG-----EVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLDYVI- 77 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ S++I +P+ D+ G + IHG + GC Sbjct: 78 -NDSAFYRSVHISYPDAIDRLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCI 136 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N++M E +V+ Sbjct: 137 AITNEEMDEFIRLVKMG 153 >gi|153825032|ref|ZP_01977699.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio cholerae MZO-2] gi|149741357|gb|EDM55391.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio cholerae MZO-2] Length = 160 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 26/143 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 16 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 70 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D + G D+ IHG Sbjct: 71 YLLDFII--EDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNSDEREPGFVQS 128 Query: 147 -CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ N++M E ++V+ Sbjct: 129 FDWTNGCIAITNQEMDEFLSLVQ 151 >gi|254227859|ref|ZP_04921289.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio sp. Ex25] gi|262396152|ref|YP_003288005.1| hypothetical protein VEA_000854 [Vibrio sp. Ex25] gi|151939355|gb|EDN58183.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio sp. Ex25] gi|262339746|gb|ACY53540.1| hypothetical protein VEA_000854 [Vibrio sp. Ex25] Length = 153 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + ++ +LKEY+I + G K E GD + PEG Y + + Sbjct: 17 LVKVDKSKRRMYLMEQGT-----ILKEYRIALGASPKGHKQEEGDNRTPEGEYTLDYVI- 70 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ S++I +P+ D + G ++ IHG + GC Sbjct: 71 -EDSAFYRSVHISYPDAIDTLEAKRRGVSPGGNIKIHGLKNGESQLPIYIQSFDWTNGCI 129 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N++M E +V Sbjct: 130 AITNEEMDEFIQLVEMG 146 >gi|229510533|ref|ZP_04400013.1| hypothetical protein VCE_001941 [Vibrio cholerae B33] gi|229517335|ref|ZP_04406780.1| hypothetical protein VCC_001356 [Vibrio cholerae RC9] gi|229605146|ref|YP_002875850.1| hypothetical protein VCD_000084 [Vibrio cholerae MJ-1236] gi|255746022|ref|ZP_05419969.1| hypothetical protein VCH_002389 [Vibrio cholera CIRS 101] gi|262162139|ref|ZP_06031154.1| hypothetical protein VIG_003319 [Vibrio cholerae INDRE 91/1] gi|229345371|gb|EEO10344.1| hypothetical protein VCC_001356 [Vibrio cholerae RC9] gi|229352978|gb|EEO17918.1| hypothetical protein VCE_001941 [Vibrio cholerae B33] gi|229371632|gb|ACQ62054.1| hypothetical protein VCD_000084 [Vibrio cholerae MJ-1236] gi|255735776|gb|EET91174.1| hypothetical protein VCH_002389 [Vibrio cholera CIRS 101] gi|262028214|gb|EEY46872.1| hypothetical protein VIG_003319 [Vibrio cholerae INDRE 91/1] Length = 160 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 26/143 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S ++++ K++ + + + N +++EY+I G K + GD++ PEG Sbjct: 16 NLSYAQVDLVKVDKSKRRMYLLQGN-----EIIREYRIALGKSPKGHKQQEGDQRTPEGH 70 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE------------- 146 Y + + +S ++ SI+I +PN D + G D+ IHG Sbjct: 71 YLLDFII--EDSSFYRSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQS 128 Query: 147 -CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ N++M E ++V+ Sbjct: 129 FDWTNGCIAITNQEMDEFLSLVQ 151 >gi|119383401|ref|YP_914457.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans PD1222] gi|119373168|gb|ABL68761.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans PD1222] Length = 209 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 25/154 (16%) Query: 33 LSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 L + P I + K+ + +++ + + ++I G Sbjct: 54 LPPIFQRPPVQPEAPIASPVRRILVEKSARRMTVYQESGPP-----RTFRIALGFSPEGD 108 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE 146 K GD + PEG + I LN S Y LS+ I +P + + R G D+MIHG+ Sbjct: 109 KSREGDGRTPEGIFRIDR--LNRQSAYHLSLGIDYPQKHHREAARRLGLSPGGDIMIHGQ 166 Query: 147 C------------ASAGCYAMNNKQMQEIYAIVR 168 +AGC A++N +++EI+A R Sbjct: 167 PNQVPDGYRVKGDWTAGCIAVDNAEIEEIFAHAR 200 >gi|152982143|ref|YP_001352557.1| hypothetical protein mma_0867 [Janthinobacterium sp. Marseille] gi|151282220|gb|ABR90630.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 393 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 14/153 (9%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 K+ + ++ + V+ + + L ++ + V+ ++ L +Y I Sbjct: 104 KSLRERPDPDMVPRAILQMREDQKNVLLVDAKRSRLYVY-QRVNGQFKLTSDYYISQGRL 162 Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLN---PNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144 K + GD++ P G YYI P ++ I +PNE+DKA+ R+G+ + +H Sbjct: 163 GV-NKFKEGDQKTPLGVYYITARLPGARLPEFYGPGALPINYPNEWDKANGRSGSGIWLH 221 Query: 145 GEC---------ASAGCYAMNNKQMQEIYAIVR 168 G +S GC + N ++E+ A V Sbjct: 222 GTPSDSYSRPPLSSDGCVVLTNPDLKELSASVE 254 >gi|269961393|ref|ZP_06175758.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833944|gb|EEZ88038.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 168 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + + ++KEY+I + G K E GD + PEG Y + + Sbjct: 32 LVKVDKSKRRMYLMENG-----EVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLDYVI- 85 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ S++I +P+ D+ G ++ IHG + GC Sbjct: 86 -NDSAFYRSVHISYPDAIDRLEAHRRGVSPGGEIKIHGLKNGETQSPQFIQSFDWTNGCI 144 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N++M E +V+ Sbjct: 145 AITNEEMDEFIKLVKMG 161 >gi|256830867|ref|YP_003159595.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM 4028] gi|256580043|gb|ACU91179.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM 4028] Length = 409 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 63/177 (35%), Gaps = 24/177 (13%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R IL+ A L + P + + M + V+R Sbjct: 1 MDTRTFILIAAFLSLLFAAPARPQSWTASLAPHPKAPPLFMAV-DMARQRAFVVR----- 54 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN---NLNPNSK 117 N D E +K+ C G K+ GD + PEG Y++ L+ +S Sbjct: 55 --------NKDGELKKMKDMS-CTTGMHGGGKLLEGDRKTPEGVYFLQGKATGGLDFDSF 105 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECAS------AGCYAMNNKQMQEIYAIVR 168 + + +PN D+ +TG +MIHG S GC + N + + VR Sbjct: 106 GNTAFPLNYPNPVDRIQGKTGNGIMIHGRGRSFGPRQTLGCVVLENDDVDTLDRHVR 162 >gi|260769479|ref|ZP_05878412.1| hypothetical protein VFA_002537 [Vibrio furnissii CIP 102972] gi|260614817|gb|EEX40003.1| hypothetical protein VFA_002537 [Vibrio furnissii CIP 102972] Length = 159 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 64/135 (47%), Gaps = 26/135 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + +++E++I G K + GD++ PEG YY+ + + Sbjct: 23 LVKVDKSKRRMYLIDDG-----HVIREFRIALGKAPKGHKQQEGDQRTPEGRYYLDF--I 75 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153 +S ++ S++I +PN D+ H G ++ IHG + GC Sbjct: 76 TEHSNFYRSMHISYPNLRDQRHAESLGVDPGGEIKIHGLKLDYQGRPEFIQSFDWTNGCI 135 Query: 154 AMNNKQMQEIYAIVR 168 A+ N++M E +V+ Sbjct: 136 AITNQEMDEFLRLVK 150 >gi|83951624|ref|ZP_00960356.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM] gi|83836630|gb|EAP75927.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM] Length = 185 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 32/182 (17%) Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R L + + L G RS +S +I + K+E Sbjct: 8 RRRLIRLTALMLVVLIGVALWRS--------VSIAPPPPPAPLPPLTGTIDLIELDKSER 59 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 + +++ L+ Y++ G K GD + PEG + I N S++ LS Sbjct: 60 RMTVYREGEA-----LRSYEVALGFAPEGDKQIEGDGKTPEGEFRIDRR--NDQSQFHLS 112 Query: 122 INIGFPNEFDKAHNR-----TGADLMIHGEC------------ASAGCYAMNNKQMQEIY 164 + I +P D+A G D+ HG+ +AGC A+ N +++E++ Sbjct: 113 LGINYPRAEDRARAAAQGVSPGGDIFFHGQPNKLPDILRRKGDWTAGCIALTNAEIEELW 172 Query: 165 AI 166 + Sbjct: 173 RV 174 >gi|254459078|ref|ZP_05072501.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] gi|207084349|gb|EDZ61638.1| conserved hypothetical protein [Campylobacterales bacterium GD 1] Length = 322 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 30/206 (14%) Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTF-GPKIETGDEQAPEGFYYIGWNNLNPN 115 K ++ L ++ ++ + Y KEY A++G G KI+ GD + P G Y I N Sbjct: 68 DKEKSTLNLYVKDNNNSYGFKKEY--SAYTGKIKGDKIKEGDLKTPIGIYQITKKLSTEN 125 Query: 116 S----KYFLSINIGFPNEFDKAHNRTGADLMIHGECA-------SAGCYAMNNKQMQEI- 163 L+ +PN +D + G + IHG + GC A+NN ++ + Sbjct: 126 KLDSFYGPLAFVTSYPNVYDTYRGKNGHGIWIHGLPTEQDRDEFTKGCIAINNPNIECLN 185 Query: 164 -------------YAIVRDSLRGNMQSHI--QIQAFPFRMTSKNMQLYQNNPNYSFWNML 208 + V+ + + S I Q+ ++ + ++ Y N + F Sbjct: 186 KRIDIDNTLLIINSSEVKKGISKEILSSILAQLYSWRYSWLFDDIDRYLNFYSSDFVRFD 245 Query: 209 KLGHDYFEKNHQEPFIQIINKQYVFF 234 + D F+K F +I K +F Sbjct: 246 GMNFDRFKKYKTRIFKKIEKKTIIFN 271 >gi|170727585|ref|YP_001761611.1| hypothetical protein Swoo_3246 [Shewanella woodyi ATCC 51908] gi|169812932|gb|ACA87516.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908] Length = 160 Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 26/134 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K+E+ + + ++KEY + + G K++ GDE+ PEG Y + + Sbjct: 24 LVKVDKSESKMYLLDSG-----QIVKEYDVAFGANPKGHKVQEGDEKTPEGTYTLDYK-- 76 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ +++I +PN+ D + G +M+HG+ + GC Sbjct: 77 KEDSSFYRAMHISYPNKQDIENAAKRGVSPGGFIMVHGQRNWLGWFAPITQSFNWTNGCI 136 Query: 154 AMNNKQMQEIYAIV 167 A++N +M E +V Sbjct: 137 ALSNSEMDEFMDLV 150 >gi|315182009|gb|ADT88922.1| hypothetical protein vfu_B00702 [Vibrio furnissii NCTC 11218] Length = 159 Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 64/135 (47%), Gaps = 26/135 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + +++E++I G K + GD++ PEG YY+ + + Sbjct: 23 LVKVDKSKRRMYLIDDG-----HVIREFRIALGKSPKGHKQQEGDQRTPEGRYYLDF--I 75 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153 +S ++ S++I +PN D+ H G ++ IHG + GC Sbjct: 76 TEHSNFYRSMHISYPNLRDQRHAESLGVDPGGEIKIHGLKLDYQGRPEFIQSFDWTNGCI 135 Query: 154 AMNNKQMQEIYAIVR 168 A+ N++M E +V+ Sbjct: 136 AITNQEMDEFLRLVK 150 >gi|119897349|ref|YP_932562.1| hypothetical protein azo1058 [Azoarcus sp. BH72] gi|119669762|emb|CAL93675.1| conserved hypothetical secreted protein [Azoarcus sp. BH72] Length = 398 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 14/153 (9%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 +A ++ + P + + L ++ RN + + + +Y Sbjct: 113 RAYRERPPTEVVPRYLMQMGPDQRYAVVVDTRRARLYVY-RNDNGKPRFVADYYASHGKA 171 Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLN---PNSKYFLSINIGFPNEFDKAHNRTGADLMIH 144 K+ GD + P G Y++ P+ + + +PN++DK RTG + +H Sbjct: 172 GA-EKMREGDNRTPLGVYHVTSFIEPKRLPDFYGSGAFPLNYPNDWDKRLGRTGHGIWLH 230 Query: 145 GECA---------SAGCYAMNNKQMQEIYAIVR 168 G + S GC + N+ + + V Sbjct: 231 GTPSDTYSRPPKASEGCVVLTNQDFTSLSSYVE 263 >gi|239831254|ref|ZP_04679583.1| Hypothetical protein OINT_1000435 [Ochrobactrum intermedium LMG 3301] gi|239823521|gb|EEQ95089.1| Hypothetical protein OINT_1000435 [Ochrobactrum intermedium LMG 3301] Length = 224 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 37/190 (19%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + + + I L G + I AE PL+ S IR+ K Sbjct: 45 MFKKTLFAVVLIAIALFGYTKVMARISLAEPPLAAP----------SEQQADAIRVEKAN 94 Query: 61 NILEIWKRNVDAEYVLLKEYKICAW-SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + + + + Y+I +G G K GDE+ PEG Y I W NP S Sbjct: 95 RQMTLLRDGRT-----IGTYRISLGSNGDGGHKQREGDEKTPEGHYVIDWR--NPRSMAH 147 Query: 120 LSINIGFPNEFDKA-----HNRTGADLMIHGEC--------------ASAGCYAMNNKQM 160 LS++I +PNE DK + G ++MIHG + GC A+ + +M Sbjct: 148 LSLHISYPNENDKQAAAAAGHAPGGNIMIHGLPNGWGWLKSAHRLWDWTDGCIAVTDAEM 207 Query: 161 QEIYAIVRDS 170 ++I+A V Sbjct: 208 RDIWARVPTG 217 >gi|329906069|ref|ZP_08274352.1| hypothetical protein IMCC9480_2761 [Oxalobacteraceae bacterium IMCC9480] gi|327547344|gb|EGF32175.1| hypothetical protein IMCC9480_2761 [Oxalobacteraceae bacterium IMCC9480] Length = 416 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 16/148 (10%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG-PK 92 + ++ + + + L ++ +N + LL +Y I G G K Sbjct: 136 PDPELVPRALLKLRDDQRFAFVVDTKRSRLYVY-QNTRGQLKLLSDYYI--TQGKLGSNK 192 Query: 93 IETGDEQAPEGFYYIGWNNLN---PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA- 148 + GD++ P G YYI P+ ++ I +PNE+D+ R+G+ + +HG + Sbjct: 193 LTEGDQKTPVGVYYITGRLGRNRLPDFYGAGALPINYPNEWDRMKGRSGSGIWLHGTPST 252 Query: 149 --------SAGCYAMNNKQMQEIYAIVR 168 S GC + N +++++ V Sbjct: 253 SYSRPPLASDGCVVLTNPDLEKLFRSVE 280 >gi|134094136|ref|YP_001099211.1| hypothetical protein HEAR0900 [Herminiimonas arsenicoxydans] gi|133738039|emb|CAL61084.1| conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 420 Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 16/166 (9%) Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 LN + K+ + +I + ++ + + L +++R+ D + Sbjct: 118 LNNLRAEAIVRLKSLRERPDPNLIPRVFLQMRADQKKLLLVDAKRSRLYVYERSKD-QVK 176 Query: 76 LLKEYKICAWSGTFG-PKIETGDEQAPEGFYYIGWNNLN---PNSKYFLSINIGFPNEFD 131 L+ +Y + G G K++ GD++ P G YYI P ++ I +PNE+D Sbjct: 177 LVSDYYVS--QGKLGVDKLKEGDQKTPLGVYYITARLDGARLPEFYGPGALPINYPNEWD 234 Query: 132 KAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168 KA+ R G+ + +HG +S GC + N ++E+ A V Sbjct: 235 KANGRGGSGIWLHGTPSDSYSRPPLSSDGCVVLTNPDLKELSASVE 280 >gi|149909260|ref|ZP_01897917.1| lipoprotein, putative [Moritella sp. PE36] gi|149807784|gb|EDM67730.1| lipoprotein, putative [Moritella sp. PE36] Length = 162 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 25/136 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + + K++ L +++ N L+K Y+I G K + GD++ PEG Y I + Sbjct: 27 YVLVKKSDRTLFLFRNN-----QLIKSYRISLGKNPIGAKTQRGDKKTPEGLYNIDFK-- 79 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC-------------ASAGCYA 154 N SKY LS++I +PN+ DK + G + IHG + GC A Sbjct: 80 NRQSKYHLSLHITYPNKRDKERSFERNLNPGDSIYIHGLPNKNKNAGLLIGSDWTNGCIA 139 Query: 155 MNNKQMQEIYAIVRDS 170 ++N +++I V D Sbjct: 140 VSNNAIRDIAKYVPDG 155 >gi|116255215|ref|YP_771048.1| hypothetical protein pRL110015 [Rhizobium leguminosarum bv. viciae 3841] gi|115259863|emb|CAK02957.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 165 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 32/159 (20%) Query: 35 ENLIISMQKKRTSPFHPT-----VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG-T 88 L+ + P P +IR++K E + + K + + Y+I Sbjct: 5 TKLMARIGAGSPPPDAPLEQQADLIRVYKAERRMILLKGDT-----PISTYRISLGQAAD 59 Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMI 143 GPK GDE+ PEG Y I W NP S LS++I +P D+ + G ++MI Sbjct: 60 EGPKQREGDEKTPEGRYEIDWR--NPKSMAHLSLHISYPGSDDRRNADAGGFPPGGNIMI 117 Query: 144 HGEC--------------ASAGCYAMNNKQMQEIYAIVR 168 HG + GC A+ N +M++I+A V Sbjct: 118 HGLPNGWGLFGNAHQLWDWTDGCIAVTNSEMRDIWARVP 156 >gi|297537707|ref|YP_003673476.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera sp. 301] gi|297257054|gb|ADI28899.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera sp. 301] Length = 408 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 88/235 (37%), Gaps = 37/235 (15%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPT--VIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85 + E LS + + +P +I + +++ L ++K N + +Y + Sbjct: 121 RIERYLSNENLDKLPNLLLAPNDQQSHLIVVDTDKSRLYLYKNN-GGNLSYVADYYVTVG 179 Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKYFLSINIGFPNEFDKAHNRTGADLMI 143 G K GD++ P G Y+ P + + + +PNE+D HNR+G+ + + Sbjct: 180 KNGVG-KQTEGDKRTPIGVYFASQKLTKPLADMYGNGAYPLNYPNEWDMQHNRSGSGIWL 238 Query: 144 HGECA---------SAGCYAMNNKQMQEIYAIVRDSL----------------RGNMQSH 178 HG + S GC + N+ + I I++ + Sbjct: 239 HGTPSNTYSRPPNASDGCVVLTNQDLNAIAPILQTGKTPVIIANHLKWIDADNTSADKDT 298 Query: 179 IQI--QAFPFRMTSKNMQLYQNNPNYSFWN---MLKLGHDY-FEKNHQEPFIQII 227 +Q+ ++ S+N Y ++ + +F + D+ F +P + I Sbjct: 299 LQVAMNSWLSDWKSQNTPKYLSHYSRAFSTDGINFQQWSDHKFTVQASKPKVDIA 353 >gi|117619935|ref|YP_855158.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561342|gb|ABK38290.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 163 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 24/142 (16%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++ + K+ L + K + +K Y I G K GD++ PEG Y + + Sbjct: 29 MVVVKKSSYSLTLMKDGKE-----VKRYWIALGPAPKGHKQREGDQRTPEGRYILDYKKT 83 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE------------CASAGCYAM 155 N S Y+ +I+I +PN D R G +MIHG+ + GC AM Sbjct: 84 N--SNYYKAIHINYPNLDDIKAANEMGVRPGGMIMIHGQRNSIGNTRLQPSNWTNGCIAM 141 Query: 156 NNKQMQEIYAIVRDSLRGNMQS 177 NK + E++ + +Q Sbjct: 142 LNKDLDEVWNAIEPGTPIVIQP 163 >gi|149188458|ref|ZP_01866751.1| hypothetical protein VSAK1_20724 [Vibrio shilonii AK1] gi|148837676|gb|EDL54620.1| hypothetical protein VSAK1_20724 [Vibrio shilonii AK1] Length = 167 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 26/134 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K+ + + + +++EY+I G KI+ GD + PEG YY+ + Sbjct: 32 VEVKKSARRMYLMDGDT-----VIREYRIALGKNPRGHKIQEGDNRTPEGKYYLDFVM-- 84 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154 +S ++ S++I +PN DK + G ++ IHG + GC A Sbjct: 85 DDSAFYRSMHISYPNLRDKNRAKSLGVAPGGNIKIHGLKNNNTKPPQFVQSFDWTNGCIA 144 Query: 155 MNNKQMQEIYAIVR 168 + N +M E+ ++V+ Sbjct: 145 ITNDEMDELVSLVK 158 >gi|323493533|ref|ZP_08098655.1| hypothetical protein VIBR0546_14470 [Vibrio brasiliensis LMG 20546] gi|323312356|gb|EGA65498.1| hypothetical protein VIBR0546_14470 [Vibrio brasiliensis LMG 20546] Length = 158 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 26/135 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I++ K++ + + + N ++KE++I G KI GD++ PEG Y++ + Sbjct: 22 LIKVDKSKRRMYLIENN-----EVVKEFRIALGKRPKGHKIHEGDQRTPEGRYFLDFVL- 75 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S+++ SI+I +PN D A+ G ++ IHG + GC Sbjct: 76 -EDSEFYRSIHISYPNAQDMAYAMNRNLDPGGNIKIHGLKNGETRPANYVQSFDWTDGCI 134 Query: 154 AMNNKQMQEIYAIVR 168 A++N++M ++ +V Sbjct: 135 AISNQEMDQLLQLVE 149 >gi|156977970|ref|YP_001448876.1| hypothetical protein VIBHAR_06766 [Vibrio harveyi ATCC BAA-1116] gi|156529564|gb|ABU74649.1| hypothetical protein VIBHAR_06766 [Vibrio harveyi ATCC BAA-1116] Length = 146 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + ++KEY+I + G K E GD + PEG Y + + Sbjct: 10 LVKVDKSKRRMYLMDNG-----EVVKEYRIALGANPKGHKQEEGDNRTPEGDYTLVYVI- 63 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ S++I +P+ D+ G + IHG + GC Sbjct: 64 -NDSAFYRSVHISYPDAIDRLEAHRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCI 122 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N++M E +V+ Sbjct: 123 AITNEEMDEFIRLVKMG 139 >gi|330831248|ref|YP_004394200.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas veronii B565] gi|328806384|gb|AEB51583.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas veronii B565] Length = 141 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 24/129 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++ + K+ L + K + LK Y I G K + GD++ PEG Y + + Sbjct: 7 LVVVKKSTYSLTLMKDGKE-----LKRYWIALGPAPKGHKQQEGDQRTPEGRYTLDYKKT 61 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE------------CASAGCYAM 155 N S Y+ +I+I +PN D R G +MIHG+ + GC AM Sbjct: 62 N--SGYYKAIHINYPNLDDIKRANELGVRPGGMIMIHGQRNSIGNRRVQPSNWTNGCIAM 119 Query: 156 NNKQMQEIY 164 N ++ E++ Sbjct: 120 LNHELDEVW 128 >gi|222824134|ref|YP_002575708.1| hypothetical protein Cla_1135 [Campylobacter lari RM2100] gi|222539356|gb|ACM64457.1| conserved hypothetical protein [Campylobacter lari RM2100] Length = 323 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 98/272 (36%), Gaps = 42/272 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------SPF 49 + ++LF+L +F+N ++ +++ + + L + KK Sbjct: 2 FKTILVLFSLVVFVNASDLAKIYLNQGIDAVEKVLEQELSKKDFWLDEIKDKNVSLGYYE 61 Query: 50 HPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I + K++ I+ ++ N + + G K GD + P GFY +G Sbjct: 62 ENVAIVLTNKSDKIIRVYHYNDGKVEKKFIQKDVLTGLA--GDKEIEGDLKTPIGFYELG 119 Query: 109 WNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNK 158 + Y + +PN DK +TG + IHG + GC A+ N Sbjct: 120 KKFYPGDPYYGPFAFATTYPNVLDKTLGKTGGGIWIHGYPLDGTRLDTYKTRGCIAVQND 179 Query: 159 QMQEI---------YAIVRDSLR---GNMQSHI---QIQAFPFRMTSKNMQLYQNNPNYS 203 +++ YA+ + + + + I + A+ ++ Y + + Sbjct: 180 LLEDFNKLVADRKSYAMTEEKNKVRANHEEVAILLANLFAWKDSWQKSDISKYLSFYDQK 239 Query: 204 -FWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 F + K ++ F KN Q F + K F Sbjct: 240 IFKHNNKFSYEQFAKNKQRIFAKKEEKTIKFS 271 >gi|148978670|ref|ZP_01815073.1| hypothetical protein VSWAT3_16790 [Vibrionales bacterium SWAT-3] gi|145962208|gb|EDK27491.1| hypothetical protein VSWAT3_16790 [Vibrionales bacterium SWAT-3] Length = 242 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 31/163 (19%) Query: 32 PLSENLIISMQKKRTSPFHPTV-----IRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86 P + L M S P + +++ K++ + + K + +++E++I Sbjct: 80 PQASLLEPYMAPDSFSEIDPLLQVVTLVKVDKSKRRMYLLKGD-----EVVQEFRIALGK 134 Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN-----RTGADL 141 G K GD + PEG Y + + S+++ S++I +P D+ G ++ Sbjct: 135 EPKGHKRFEGDNRTPEGEYTLDYIM--ERSEFYRSVHINYPRSSDRQWAEENDVDPGGNI 192 Query: 142 MIHGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170 IHG + GC A+ N+ M E +V+ Sbjct: 193 KIHGIKNGERRSPGFIQSFDWTDGCIALTNQDMDEFIQLVKMG 235 >gi|258624844|ref|ZP_05719772.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|262173004|ref|ZP_06040681.1| hypothetical protein VII_000090 [Vibrio mimicus MB-451] gi|258582842|gb|EEW07663.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|261890362|gb|EEY36349.1| hypothetical protein VII_000090 [Vibrio mimicus MB-451] Length = 160 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 26/134 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + + N +++EY+I G K + GD++ PEG Y++ + + Sbjct: 24 LVKVDKSKRRMYLLQGN-----EVIREYRIALGKSPKGHKQQEGDQRTPEGHYFLDF--V 76 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 S ++ SI+I +PN+ D+ + G D+ IHG + GC Sbjct: 77 TQESHFYRSIHISYPNQQDEQYAALLGVSPGGDIKIHGLKNGETADPAFIQSFDWTNGCI 136 Query: 154 AMNNKQMQEIYAIV 167 A+ N +M E ++V Sbjct: 137 ALTNLEMDEFLSLV 150 >gi|258622323|ref|ZP_05717349.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258585647|gb|EEW10370.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 160 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 26/134 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + + N +++EY+I G K + GD++ PEG Y++ + + Sbjct: 24 LVKVDKSKRRMYLLQGN-----EVIREYRIALGKSPKGHKQQEGDQRTPEGHYFLDF--V 76 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 S ++ SI+I +PN+ D+ + G D+ IHG + GC Sbjct: 77 TQESHFYRSIHISYPNQQDERYAALLGVSPGGDIKIHGLKNGETADPAFIQSFDWTNGCI 136 Query: 154 AMNNKQMQEIYAIV 167 A+ N +M E ++V Sbjct: 137 ALTNLEMDEFLSLV 150 >gi|86137252|ref|ZP_01055830.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193] gi|85826576|gb|EAQ46773.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193] Length = 178 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 24/132 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I I K++ L ++ + +Y I G K GD + PEG + I Sbjct: 44 YILIEKSKRRLSAHRKGQQ-----VLQYSIALGFAPIGDKSREGDGKTPEGLFKINRR-- 96 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC------------ASAGCYAM 155 N NS + LS+ I +P D A G D+ IHG+ +AGC A+ Sbjct: 97 NSNSSFHLSLGIDYPRPEDIARAEALGLNPGGDIFIHGQPNRLGNHLMLPGDWTAGCIAI 156 Query: 156 NNKQMQEIYAIV 167 +N +M ++ + Sbjct: 157 SNSEMVALWRLA 168 >gi|218676977|ref|YP_002395796.1| hypothetical protein VS_II1218 [Vibrio splendidus LGP32] gi|218325245|emb|CAV27216.1| conserved hypothetical protein [Vibrio splendidus LGP32] Length = 257 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 26/171 (15%) Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78 S ++ S L + + T++++ K++ + + K + +++ Sbjct: 87 SQGSSKRPPQSSSQQSYTLTGPSSEADSLSQVVTLVKVDKSKRRMYLLKGD-----EVIQ 141 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN--- 135 E++I G K GD + PEG Y + + S + S++I +P D Sbjct: 142 EFRIALGKQPKGHKRFEGDNRTPEGEYQLDYVM--EESDFHRSVHISYPQPSDMQWAEEN 199 Query: 136 --RTGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170 G ++ IHG + GC A+ N+ M E +V+ Sbjct: 200 DVDPGGNIKIHGIKNGERRSPSFIQSFDWTDGCIALTNQDMDEFLQLVKMG 250 >gi|86145077|ref|ZP_01063409.1| uncharacterized protein conserved in bacteria [Vibrio sp. MED222] gi|85837976|gb|EAQ56088.1| uncharacterized protein conserved in bacteria [Vibrio sp. MED222] Length = 257 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 26/171 (15%) Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78 S ++ S L + + T++++ K++ + + K + +++ Sbjct: 87 SQGSSKRPPQSSSQQSYTLTGPSSEADSLSQVVTLVKVDKSKRRMYLLKGD-----EVIQ 141 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN--- 135 E++I G K GD + PEG Y + + S + S++I +P D Sbjct: 142 EFRIALGKQPKGHKRFEGDNRTPEGEYQLDYVM--EESDFHRSVHISYPQPSDMQWAEEN 199 Query: 136 --RTGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDS 170 G ++ IHG + GC A+ N+ M E +V+ Sbjct: 200 DVDPGGNIKIHGIKNGERRSPSFIQSFDWTDGCIALTNQDMDEFLQLVKMG 250 >gi|42522629|ref|NP_968009.1| hypothetical protein Bd1075 [Bdellovibrio bacteriovorus HD100] gi|39575161|emb|CAE79002.1| Uncharacterized conserved [Bdellovibrio bacteriovorus HD100] Length = 332 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 100/267 (37%), Gaps = 50/267 (18%) Query: 3 NRYNI---LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 R + LFAL + + + + + E L ++ + + T F VI + K Sbjct: 1 MRLLLTGCALFALSLPVLA-GPAVTPSSQIETDLLPASLLQISE--TEAFSRYVILVDKE 57 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN---- 115 + L +++RN + + EY G K + D + PEG Y++ P Sbjct: 58 QRKLSVFERN-GEQIQKITEYPADIGKMG-GNKTKRDDHKTPEGIYFLQERLSQPKIPFS 115 Query: 116 SKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA-------GCYAMNNKQMQE------ 162 L+ +PN FDK N+TG+ + +H S GC + N +++ Sbjct: 116 LYGALAFTTNYPNLFDKRENKTGSGIWLHAIPDSVPLTRGSRGCVVVRNDVIKKLADYIK 175 Query: 163 -------IYAIVRDSLRGNMQSHIQ-----IQAFPFRMTSKNMQLYQNNPNYSF------ 204 I+ V + Q ++++ +++++ YQ + F Sbjct: 176 LGETPILIFDHVNYVSKSEHDKRRQDLSRFVESWRQAWENQDIEKYQTFYDEGFKAPGFN 235 Query: 205 ---W----NMLKLGHDYFEKNHQEPFI 224 W LK ++Y + + +P+I Sbjct: 236 YKSWMSHKKNLKSKYEYIKVHLSQPYI 262 >gi|119477590|ref|ZP_01617740.1| hypothetical protein GP2143_09015 [marine gamma proteobacterium HTCC2143] gi|119449093|gb|EAW30333.1| hypothetical protein GP2143_09015 [marine gamma proteobacterium HTCC2143] Length = 163 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 57/143 (39%), Gaps = 26/143 (18%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + K E L + K V E+ I G K E GDE+ PEG Y + + N Sbjct: 28 VLVAKAEKKLYLIKDG-----VPFLEFPIALSPKPRGHKREQGDERTPEGRYILDFK--N 80 Query: 114 PNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGEC--------------ASAGCYA 154 +S ++ SI I +PN+ D G +MIHG + GC A Sbjct: 81 QDSDFYKSIRISYPNQQDLHRAELNGVDPGGAIMIHGMPNESSLPASLIQQFNWTDGCIA 140 Query: 155 MNNKQMQEIYAIVRDSLRGNMQS 177 + N M EI+A V +Q Sbjct: 141 VTNGAMDEIWAAVETGTPIEIQP 163 >gi|190895329|ref|YP_001985621.1| hypothetical protein RHECIAT_PA0000012 [Rhizobium etli CIAT 652] gi|190699274|gb|ACE93358.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 173 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 27/137 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNN 111 +IR++K+E + + K + + Y+I SG GPK GDE+ PEG Y I W Sbjct: 36 LIRVYKSERRMVLLKGD-----APIAAYEISLGSGANAGPKQREGDEKTPEGRYEIDWR- 89 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGC 152 N S LS++I +P ++ G ++MIHG + GC Sbjct: 90 -NAKSTEHLSLHISYPKPEEQRAAEVNGFPAGGNIMIHGLPNGWGLLGKAHRLWDWTDGC 148 Query: 153 YAMNNKQMQEIYAIVRD 169 A+ N +M++I+A V D Sbjct: 149 IAVTNAEMRDIWARVPD 165 >gi|163803216|ref|ZP_02197097.1| hypothetical protein 1103602000599_AND4_11960 [Vibrio sp. AND4] gi|159172971|gb|EDP57807.1| hypothetical protein AND4_11960 [Vibrio sp. AND4] Length = 160 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + + ++KE++I S G K E GD + PEG Y + + Sbjct: 24 LVKVDKSKRRMYLIENG-----EVVKEFRIALGSNPKGHKQEEGDNRTPEGDYTLNYVI- 77 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 NS ++ S++I +P+ D+ + G + IHG + GC Sbjct: 78 -NNSAFYRSVHISYPDAIDRLEAQRRGVSPGGAIKIHGLKNGETQAPQFIQSFDWTNGCI 136 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N++M E +V+ Sbjct: 137 AITNQEMDEFIRLVQMG 153 >gi|82703004|ref|YP_412570.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196] gi|82411069|gb|ABB75178.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196] Length = 413 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 72/203 (35%), Gaps = 28/203 (13%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80 +R+ + + P+ ++ + P I + L ++K NVD L +Y Sbjct: 120 EARARLQRHLAPIPLDMT-PKYLLQMPPEQKYAIIADTGRSRLYLYK-NVDGSPRYLADY 177 Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIG---WNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 I K++ GD++ P G Y++ + ++ I +PNE+DK H R+ Sbjct: 178 YISTGKNGS-QKLKEGDKKTPIGVYFVTDNLPRQRLSDFYGGMAFPINYPNEWDKRHGRS 236 Query: 138 GADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRM 188 G + +HG AS GC + N + +L +Q I +M Sbjct: 237 GYGIWLHGTPPDTYSRPPRASDGCVVLANDDLN--------ALASTLQVGITSVIISDQM 288 Query: 189 T-----SKNMQLYQNNPNYSFWN 206 + + W Sbjct: 289 EWVKPHDAAALRRKLAQHLERWR 311 >gi|145297687|ref|YP_001140528.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850459|gb|ABO88780.1| ErfK/YbiS/YcfS/YnhG family protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 173 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 24/142 (16%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I + K+ L + K + +K Y I G K GD++ PEG Y + + Sbjct: 39 MIVVKKSSYSLTLMKDGKE-----VKRYWIALGPAPKGHKQREGDQRTPEGRYILDYKKT 93 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE------------CASAGCYAM 155 N S Y+ +I+I +PN D G +MIHG+ + GC AM Sbjct: 94 N--SNYYKAIHINYPNLDDIKTANEMGVNPGGMIMIHGQRNSIGNTRLQPSNWTNGCIAM 151 Query: 156 NNKQMQEIYAIVRDSLRGNMQS 177 N + E++ + +Q Sbjct: 152 LNHDLDEVWNAIEPGTPIIIQP 173 >gi|39995292|ref|NP_951243.1| putative lipoprotein [Geobacter sulfurreducens PCA] gi|39982054|gb|AAR33516.1| lipoprotein, putative [Geobacter sulfurreducens PCA] gi|307634660|gb|ADI83018.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, TPR domain-containing [Geobacter sulfurreducens KN400] Length = 309 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 37/123 (30%), Positives = 51/123 (41%), Gaps = 26/123 (21%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K + L + +++ YK+ GPK GD + PEG Y I N Sbjct: 174 ILIEKKDRRLSLLSMG-----EVIRTYKVALGGNPVGPKERQGDNKTPEGSYVIEGR--N 226 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------------ECASAGCYA 154 S+Y LS+ I +PNE DK R G D+MIHG + GC A Sbjct: 227 KGSRYHLSLRISYPNEKDKKRAREMGVSPGGDIMIHGIKNGLSQVGAAHAEVDWTQGCIA 286 Query: 155 MNN 157 + + Sbjct: 287 VTD 289 >gi|90022704|ref|YP_528531.1| hypothetical protein Sde_3062 [Saccharophagus degradans 2-40] gi|89952304|gb|ABD82319.1| ErfK/YbiS/YcfS/YnhG family protein [Saccharophagus degradans 2-40] Length = 158 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 26/129 (20%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ L + K ++K+Y + + G K + GDE+ PEG Y + + Sbjct: 22 LVKVVKSKGALYLMKGET-----VVKQYAVVFGANPKGHKQQEGDERTPEGVYSLDYK-- 74 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ +++I +PN D + G +M+HG+ + GC Sbjct: 75 KEDSAFYRAMHISYPNAEDVRKAKARGVSAGGFIMVHGQRNGLGWLAFVMQNFNWTNGCI 134 Query: 154 AMNNKQMQE 162 A+ N M E Sbjct: 135 ALTNSDMDE 143 >gi|323144996|ref|ZP_08079556.1| ErfK/YbiS/YcfS/YnhG family protein [Succinatimonas hippei YIT 12066] gi|322415275|gb|EFY06049.1| ErfK/YbiS/YcfS/YnhG family protein [Succinatimonas hippei YIT 12066] Length = 212 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 75/200 (37%), Gaps = 46/200 (23%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSP-------FHPTV------ 53 LFA+ F++ C + ++ + + P Sbjct: 10 FFLFAVGFFVSSCSTYTKIDRSSDLYYEALTEPVIYDRDYDYVNLGRFANLPIYPKGYRG 69 Query: 54 -------IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 + + K + + + K++ +++ Y I G K GD++ PEG Y Sbjct: 70 PKKLIDHVIVNKANHQMFLMKKD-----KVIRSYWIALSDKPVGDKQYEGDKRTPEGTYT 124 Query: 107 IGWNNLNPNSKYFLSINIGFPNEFD-----KAHNRTGADLMIHGEC-------------- 147 + + +N NS Y+ S +I +PN+ D K R G +MIHG+ Sbjct: 125 LDY--INYNSNYYKSFHISYPNDQDIEEAKKLGKRPGGMIMIHGQPYNSSEYHATVQRSD 182 Query: 148 ASAGCYAMNNKQMQEIYAIV 167 + GC A+ N +M E ++V Sbjct: 183 WTDGCIAILNPEMDEFISLV 202 >gi|242280688|ref|YP_002992817.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio salexigens DSM 2638] gi|242123582|gb|ACS81278.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio salexigens DSM 2638] Length = 424 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 56/170 (32%), Gaps = 22/170 (12%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +Y +F I L S + E + ++ ++ + K Sbjct: 1 MGMKYFFRVFTAAILLLAGLTSLAFAKGWEPVIDPTPLV----------PDYILAVDKES 50 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN---NLNPNSK 117 L + + CA G K+ GD + PEG Y+ N Sbjct: 51 QKLHLLVHKS--PLHAEASFT-CATGQVAGDKVVEGDLKTPEGIYFTTGKRTGLKNYTLY 107 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQ 161 ++ + FPN D+ +TG + IHG + GC A+ N M Sbjct: 108 GKMAFPLNFPNPVDRIKGKTGYGIWIHGRGKELVPMDTQGCVALVNSDMD 157 >gi|260362135|ref|ZP_05775130.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030] gi|260896320|ref|ZP_05904816.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus Peru-466] gi|308094839|ref|ZP_05892934.2| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AN-5034] gi|308126143|ref|ZP_05908130.2| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037] gi|308085138|gb|EFO34833.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus Peru-466] gi|308091743|gb|EFO41438.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AN-5034] gi|308110411|gb|EFO47951.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037] gi|308114649|gb|EFO52189.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030] gi|328469985|gb|EGF40896.1| hypothetical protein VP10329_04277 [Vibrio parahaemolyticus 10329] Length = 160 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 26/134 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + + + +LKEY+I + G K E GD + PEG Y + + Sbjct: 24 LVKVDKSKRRMYLIEDGI-----ILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDYVI- 77 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ S++I +P+ D G ++ IHG + GC Sbjct: 78 -EDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCI 136 Query: 154 AMNNKQMQEIYAIV 167 A+ N++M E +V Sbjct: 137 ALTNEEMDEFIQLV 150 >gi|153838809|ref|ZP_01991476.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ3810] gi|149747789|gb|EDM58683.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ3810] Length = 148 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 26/134 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + + + +LKEY+I + G K E GD + PEG Y + + Sbjct: 12 LVKVDKSKRRMYLIEDGI-----ILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDYVI- 65 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ S++I +P+ D G ++ IHG + GC Sbjct: 66 -EDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCI 124 Query: 154 AMNNKQMQEIYAIV 167 A+ N++M E +V Sbjct: 125 ALTNEEMDEFIQLV 138 >gi|28900000|ref|NP_799655.1| hypothetical protein VPA0145 [Vibrio parahaemolyticus RIMD 2210633] gi|28808283|dbj|BAC61488.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 165 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 26/134 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + + + +LKEY+I + G K E GD + PEG Y + + Sbjct: 29 LVKVDKSKRRMYLIEDGI-----ILKEYRIALGASPKGHKQEEGDNRTPEGSYTLDYVI- 82 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S ++ S++I +P+ D G ++ IHG + GC Sbjct: 83 -EDSAFYRSVHISYPDAIDTLEAHRRGVSPGGNIKIHGLKNGETQDPSFIQSFDWTNGCI 141 Query: 154 AMNNKQMQEIYAIV 167 A+ N++M E +V Sbjct: 142 ALTNEEMDEFIQLV 155 >gi|305432036|ref|ZP_07401203.1| conserved hypothetical secreted protein [Campylobacter coli JV20] gi|304445120|gb|EFM37766.1| conserved hypothetical secreted protein [Campylobacter coli JV20] Length = 325 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 89/274 (32%), Gaps = 42/274 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------S 47 M + F L + +++ + + + K Sbjct: 1 MLKKILAFYFICISALGASDLVKIYLNQGLDAVGVAIEKELTNKDFWLDEIGDRNISLGY 60 Query: 48 PFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 I + K + IL ++ + ++ I +G G K GD + P GFY Sbjct: 61 YNDDVAIVLTNKTDKILRVYSYSDGKIKQDFEQKAI--ITGLMGDKQVEGDLKTPVGFYE 118 Query: 107 IGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 119 LGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGTRLDEFKTRGCIALF 178 Query: 157 NKQMQE---------IYAIVRDSLRGNMQSH------IQIQAFPFRMTSKNMQLYQNNP- 200 N+ ++E ++A+ + + + + A+ T ++ Y N Sbjct: 179 NENLEEFAKVVQDKKVFAMTEEKEKVRAKKEDIAALLADLFAWKLAWTDSDINTYLNFYD 238 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 F K+ + F + F + +K+ F Sbjct: 239 EKQFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|57504965|ref|ZP_00370917.1| conserved hypothetical secreted protein [Campylobacter coli RM2228] gi|57019237|gb|EAL55943.1| conserved hypothetical secreted protein [Campylobacter coli RM2228] Length = 325 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 89/274 (32%), Gaps = 42/274 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------S 47 M + F L + +++ + + + K Sbjct: 1 MLKKILAFYFICISALGASDLVKIYLNQGLDAVGVAIEKELTNKDFWLDEIGDRNISLGY 60 Query: 48 PFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 I + K + IL ++ + ++ I +G G K GD + P GFY Sbjct: 61 YDDDVAIVLTNKTDKILRVYSYSDGKIKQDFEQKAI--ITGLMGDKQVEGDLKTPVGFYE 118 Query: 107 IGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 119 LGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGTRLDEFKTRGCIALF 178 Query: 157 NKQMQE---------IYAIVRDSLRGNMQSH------IQIQAFPFRMTSKNMQLYQNNP- 200 N+ ++E ++A+ + + + + A+ T ++ Y N Sbjct: 179 NENLEEFAKVVQDKKVFAMTEEKEKVRAKKEDIAALLADLFAWKLAWTDSDINTYLNFYD 238 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 F K+ + F + F + +K+ F Sbjct: 239 EKQFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|126664087|ref|ZP_01735081.1| protein ERFK [Flavobacteria bacterium BAL38] gi|126624036|gb|EAZ94730.1| protein ERFK [Flavobacteria bacterium BAL38] Length = 170 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 26/134 (19%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + ++K+++ L + + L+K Y I G K GD++ PEG Y I ++ Sbjct: 34 AMIVYKSKHQLLAFSKG-----KLIKTYTISLGRNPVGAKEYEGDQKTPEGTYSI--HDK 86 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHG--------------ECASAGCY 153 NPNS + ++ I +PN+ D A + G ++ IHG + + GC Sbjct: 87 NPNSGWHKNLGISYPNQNDMAKAKRLGKPAGGNIKIHGLKNGKGYIGKFHRWQDWTLGCI 146 Query: 154 AMNNKQMQEIYAIV 167 A+ N ++ E+YA V Sbjct: 147 AVTNAEIDELYAAV 160 >gi|84393864|ref|ZP_00992608.1| uncharacterized protein conserved in bacteria [Vibrio splendidus 12B01] gi|84375511|gb|EAP92414.1| uncharacterized protein conserved in bacteria [Vibrio splendidus 12B01] Length = 259 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ + + K +++E++I G K GD + PEG Y + + Sbjct: 123 LVKVDKSKRRMYLLKGE-----EVVQEFRIALGKQPKGHKRFEGDNRTPEGKYQLDYVM- 176 Query: 113 NPNSKYFLSINIGFPNEFDKAHN-----RTGADLMIHGE--------------CASAGCY 153 S ++ S++I +P D G ++ IHG + GC Sbjct: 177 -EESDFYRSVHINYPQSSDMQWAQKNDVDPGGNIKIHGIKNGERRSPSFIQSFDWTDGCI 235 Query: 154 AMNNKQMQEIYAIVRDS 170 A+ N+ M E +V+ Sbjct: 236 ALTNQDMDEFIQLVKMG 252 >gi|42523254|ref|NP_968634.1| hypothetical protein Bd1763 [Bdellovibrio bacteriovorus HD100] gi|39575459|emb|CAE79627.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100] Length = 209 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 27/133 (20%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + + K +L + + +L Y + G K GD++ PEG Y+ Sbjct: 72 FVLVDKKRRMLHVMRHG-----QVLATYAVALGGNPQGHKKNEGDQRTPEGRYFFD--LK 124 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGEC--------------ASAGC 152 S+Y L + I +PN D A + G ++IHG + GC Sbjct: 125 KAKSEYHLGLRINYPNARDLAEAKKNGIKNPGDSILIHGLPNSWVKRKVIRHPRDWTKGC 184 Query: 153 YAMNNKQMQEIYA 165 A+ N +++EIYA Sbjct: 185 MAVRNYEIEEIYA 197 >gi|268679011|ref|YP_003303442.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurospirillum deleyianum DSM 6946] gi|268617042|gb|ACZ11407.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurospirillum deleyianum DSM 6946] Length = 365 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 75/207 (36%), Gaps = 30/207 (14%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I K E+++ + D L+K + + G KI+ GD + P G Y I Sbjct: 110 LIVCEKERKRCEVYRNSEDEGLELIKGHDVIMGKN--GDKIKRGDLKTPVGVYEITKRFK 167 Query: 113 NPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQ-- 161 + Y L+ ++ +PN FD + G+ + IHG S GC M N +Q Sbjct: 168 PSDPFYGPLAFSLSYPNLFDVLRGKNGSGIWIHGMPLDGKDREDLSKGCVVMENDAIQVL 227 Query: 162 --EIYAIVRDSLRGNMQSHIQ-------------IQAFPFRMTSKNMQLYQNNPNYSFWN 206 EI ++ ++ + + + ++ +Y N + F Sbjct: 228 DTEI--NANKTMTIIGENKVPPMSKEVVATLLSEVYKWQRAWKVNDINMYLNYYSNDFKK 285 Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVF 233 + + F ++ F + K F Sbjct: 286 VDGSRKEQFAAMKKQIFSRKEKKTITF 312 >gi|253995882|ref|YP_003047946.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera mobilis JLW8] gi|253982561|gb|ACT47419.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera mobilis JLW8] Length = 417 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 15/149 (10%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPT--VIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85 + E L++ +P ++ I +++ L ++ D + + +Y I Sbjct: 129 RIERYLAKQSQAKQPNLILAPNAQQTHLMLIDTSKSRLYLY-EKHDNQLKYVADYYITVG 187 Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMI 143 K GD++ P G Y+ ++ + + +PNE+DKAHNR G+ + + Sbjct: 188 KNGV-EKQSEGDKRTPIGVYFASTKLKQQLPDFYGEGAYPLSYPNEWDKAHNRNGSGIWL 246 Query: 144 HGECA---------SAGCYAMNNKQMQEI 163 HG + S GC + N+ ++ + Sbjct: 247 HGTPSSTYSRPPRASDGCVVVANQDLKAL 275 >gi|237807104|ref|YP_002891544.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187] gi|237499365|gb|ACQ91958.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187] Length = 162 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 26/154 (16%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 L L++ T ++ + K++ L ++ + V LK Y + GPK Sbjct: 6 LISGLLLGFSVNATIMPKADLVVVKKSQYSLTLYSKG-----VPLKRYWVALGPNPRGPK 60 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE- 146 I GD + PEG Y + + + +S Y+ + +I +P+ D + G +++HG+ Sbjct: 61 IREGDNKTPEGRYLLDYRKM--DSNYYKAFHISYPSLNDMKRAQHLGVEPGGQILLHGQR 118 Query: 147 -------------CASAGCYAMNNKQMQEIYAIV 167 + GC A+ N M E++ V Sbjct: 119 KGSVMSDETLQRSNWTNGCIALINADMDELWESV 152 >gi|91774853|ref|YP_544609.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] gi|91708840|gb|ABE48768.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 404 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 13/136 (9%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 SP + + ++ L ++ +N D++ L +Y I K GD++ P G Y Sbjct: 137 MSPEQRYAVVVDTTKSRLYVY-QNRDSQLHHLVDYYITMGKNGS-EKFTEGDKRTPLGIY 194 Query: 106 YIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYA 154 + ++ + + +PN DK H + G + +HG AS GC Sbjct: 195 IADKKLEHKLPDFYGEAAYPLNYPNPLDKRHGKKGHGIWLHGTPQDVYSRPPKASDGCVV 254 Query: 155 MNNKQMQEIYAIVRDS 170 + N ++ + +++ Sbjct: 255 IANPDIKALAPVLQQG 270 >gi|163852564|ref|YP_001640607.1| hypothetical protein Mext_3148 [Methylobacterium extorquens PA1] gi|163664169|gb|ABY31536.1| conserved hypothetical protein [Methylobacterium extorquens PA1] Length = 182 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 62/186 (33%), Gaps = 33/186 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R I + + G L+ ++ + + K Sbjct: 1 MGRRGRIAAVIGGLAVLGAGAVVLADFSQVGRTEPPLVAQAERAD-------RVLVEKAA 53 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + + +L Y I G K GD + PEG Y + NP S L Sbjct: 54 RRLTLLREG-----RVLATYPISLGFAPEGHKAREGDGRTPEGVYTTAFR--NPRSVAHL 106 Query: 121 SINIGFPNEFDKAH----NR-TGADLMIHG--------------ECASAGCYAMNNKQMQ 161 S+ + +P+ D A G D+MIHG + + GC + N +M+ Sbjct: 107 SLKVSYPSPADAAAVQAGGYSPGGDIMIHGLMNGFSWLGRLHRLKDWTQGCVGVTNAEMR 166 Query: 162 EIYAIV 167 IYA V Sbjct: 167 AIYARV 172 >gi|307720793|ref|YP_003891933.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurimonas autotrophica DSM 16294] gi|306978886|gb|ADN08921.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurimonas autotrophica DSM 16294] Length = 330 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 28/207 (13%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF-GPKIETGDEQAPEGFYYIGWNNL 112 + K+++ L I+ ++ + Y L KEY A++G G K + GD + P G Y I Sbjct: 76 LLCDKSKSELLIYSKDSNNTYKLRKEY--SAFTGKLKGDKRKEGDLKTPIGVYDIIKKIS 133 Query: 113 NPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGECA-------SAGCYAMNNKQMQ--- 161 +S Y ++ +PN +D+ +TG + IHG + GC A+NNK ++ Sbjct: 134 KVDSFYGPMAFVTSYPNLYDRYEGKTGQGIWIHGLPTNQERDAFTKGCIAINNKSIECMN 193 Query: 162 ---EIYAIV----RDSLRGN-------MQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNM 207 +I V ++ Q + A+ + + Y N F Sbjct: 194 RNIDIKKTVLIIKENANDSTTPSKKTLSQLLSTLYAWRYAWLYNETENYLNFYAPEFKRY 253 Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVFF 234 + F+K F + +K +F Sbjct: 254 DGMDFKRFKKYKTRIFAKYESKTILFR 280 >gi|218510701|ref|ZP_03508579.1| hypothetical protein RetlB5_26713 [Rhizobium etli Brasil 5] Length = 164 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 38/176 (21%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + +L A + + P++ + +IR++K+E Sbjct: 1 MRTKIIVLAVATSSLFVYTKVMARIGSGSPPPVAPMEQRA-----------DLIRVYKSE 49 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 + + + + + Y+I GPK GDE+ PEG Y I W NP S Sbjct: 50 RRMVLLRGD-----APIATYQISLGGAADAGPKQREGDEKTPEGLYEIDWR--NPKSMAH 102 Query: 120 LSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMN 156 LS++I +PN ++ G +MIHG + GC A++ Sbjct: 103 LSLHISYPNPKEQRAAEANGFPPGGSIMIHGLPNGWGLLGQAHRLWDWTDGCIAVS 158 >gi|319795776|ref|YP_004157416.1| erfk/ybis/ycfs/ynhg family protein [Variovorax paradoxus EPS] gi|315598239|gb|ADU39305.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus EPS] Length = 508 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 14/158 (8%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 +A + Q S I + + + L + N D L+ +Y I Sbjct: 219 SRRRLQALRERPPVGTVPSQFLSLSTRSRYAIAVDASRSRLYL-LENSDKGLKLVADYYI 277 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP---NSKYFLSINIGFPNEFDKAHNRTGA 139 K+ GD + P G YYI + ++ I +PN +D RTG+ Sbjct: 278 SVGKSGT-DKLAEGDARTPLGVYYITSRLDPKSLKDFYGAGALPINYPNPYDVRRGRTGS 336 Query: 140 DLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168 + +HG AS GC M N ++++ V+ Sbjct: 337 GIWLHGTPPQQFARAPLASDGCVVMANPDLKQLLRKVQ 374 >gi|157415163|ref|YP_001482419.1| hypothetical protein C8J_0843 [Campylobacter jejuni subsp. jejuni 81116] gi|157386127|gb|ABV52442.1| hypothetical protein C8J_0843 [Campylobacter jejuni subsp. jejuni 81116] gi|307747806|gb|ADN91076.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni M1] gi|315932612|gb|EFV11543.1| hypothetical protein CSU_0096 [Campylobacter jejuni subsp. jejuni 327] Length = 325 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 42/274 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------S 47 M R +L+ + L + +++ + + + +K Sbjct: 1 MLKRLALLITLSSLMLYASDLVKIYLNQGLDAVGVAIEKELTQKDFWLSEIGDKNISLGY 60 Query: 48 PFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 61 YDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYE 118 Query: 107 IGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 119 LGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALF 178 Query: 157 NKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNPN 201 N +++ +V+D + + + T+ + Y + + Sbjct: 179 NNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYD 238 Query: 202 Y-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 F K+ + F + F + +K+ F Sbjct: 239 EQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|78358053|ref|YP_389502.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220458|gb|ABB39807.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 442 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 25/164 (15%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +L+F F L H + A L P + + K+ L ++ Sbjct: 24 LLIFLTFCILPAAHAHAGGWNAAIGELPH-------------LPPRFVAVDKSRQTLFLY 70 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSKYFLSIN 123 + + + Y C G K GD + PEG Y++ L+ + ++ Sbjct: 71 RHSS--PLEVSATYT-CTTGQATGDKQVEGDLRTPEGVYFVEHRIDKGLDWDLYGGIAYT 127 Query: 124 IGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQMQ 161 + +PN D +TG + IHG + GC A+N ++ Sbjct: 128 LNYPNPVDALRRKTGFGIWIHGRGHEITPRETQGCIALNMADIE 171 >gi|283954467|ref|ZP_06371987.1| hypothetical protein C414_000220089 [Campylobacter jejuni subsp. jejuni 414] gi|283794084|gb|EFC32833.1| hypothetical protein C414_000220089 [Campylobacter jejuni subsp. jejuni 414] Length = 325 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 94/275 (34%), Gaps = 42/275 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------S 47 M R +L+ + L+ + +++ + + + + +K Sbjct: 1 MLKRLALLITLSSMMLHASDLVKIYLNQGLNAVGAAIEKELTQKDFWLGEIGDKNVSLGY 60 Query: 48 PFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 61 YDDNVAIVLTNKTDKILRVYFYEDGKIRKDFEQKEI--ITGLMGNKKTEGDLKTPVGFYE 118 Query: 107 IGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 119 LGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRIDEFKTRGCIALF 178 Query: 157 NKQMQEIYAIVRDS---LRGNMQSHI------------QIQAFPFRMTSKNMQLYQNNP- 200 N +++ IV+D + + + + + T+ ++ Y + Sbjct: 179 NNNLEKFAQIVQDKKVFVMTEEEKKVRATKDEIASLLADLFMWKLAWTNSDINTYLSFYD 238 Query: 201 NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 F K+ + F + F + +K+ F Sbjct: 239 ELKFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSS 273 >gi|86153307|ref|ZP_01071511.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612822|ref|YP_001000581.1| hypothetical protein CJJ81176_0915 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005512|ref|ZP_02271270.1| hypothetical protein Cjejjejuni_04735 [Campylobacter jejuni subsp. jejuni 81-176] gi|85843033|gb|EAQ60244.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249350|gb|EAQ72310.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 81-176] gi|315058346|gb|ADT72675.1| Putative periplasmic protein [Campylobacter jejuni subsp. jejuni S3] Length = 325 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 91/274 (33%), Gaps = 42/274 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------S 47 M R +L+ + L+ + +++ + + + +K Sbjct: 1 MLKRLALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQKDFWLSEIGDKNISLGY 60 Query: 48 PFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 61 YDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYE 118 Query: 107 IGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 119 LGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALF 178 Query: 157 NKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNPN 201 N +++ +V+D + + + T+ + Y + + Sbjct: 179 NNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYD 238 Query: 202 Y-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 F K+ + F + F + +K+ F Sbjct: 239 EQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|224370133|ref|YP_002604297.1| putative ErfK family protein (precursor) [Desulfobacterium autotrophicum HRM2] gi|223692850|gb|ACN16133.1| putative ErfK family protein (precursor) [Desulfobacterium autotrophicum HRM2] Length = 347 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 23/165 (13%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 L+F + I G + + E + + + + + K+ L Sbjct: 20 LFGLMFGVQIVFAGANEPGESDTRPEG-------LILVPMGMN-----AVVVEKSSQQLF 67 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLS 121 ++ + Y ++ C+ + G K+++GD++ PEG Y++ + + Sbjct: 68 LFSSDSQGVYERMRV--PCSTGASPGRKLKSGDQKTPEGVYFLTDAYEDRYLSAVYGKKA 125 Query: 122 INIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQM 160 +PN D+ R G+ + +HG S GC AMNN+ + Sbjct: 126 FPTDYPNFIDRRKGRDGSAIWLHGTNKPLKPMDSNGCVAMNNQDI 170 >gi|57237735|ref|YP_178983.1| hypothetical protein CJE0985 [Campylobacter jejuni RM1221] gi|57166539|gb|AAW35318.1| conserved hypothetical protein [Campylobacter jejuni RM1221] Length = 325 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 91/274 (33%), Gaps = 42/274 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------S 47 M R +L+ + L+ + +++ + + + +K Sbjct: 1 MLKRIALLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQKDFWLSEIGDKNISLGY 60 Query: 48 PFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 61 YDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYE 118 Query: 107 IGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 119 LGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALF 178 Query: 157 NKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNPN 201 N +++ +V+D + + + T+ + Y + + Sbjct: 179 NNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYD 238 Query: 202 Y-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 F K+ + F + F + +K+ F Sbjct: 239 EQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|260221390|emb|CBA29904.1| hypothetical protein Csp_A14490 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 367 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 14/165 (8%) Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 L L A I Q + + I + + L +++ Sbjct: 71 LQALRAESQLRIAAIKEPPPADRIPAQFVALAKRNKHAIAVDTAKARLYLFENTEAGP-R 129 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN---PNSKYFLSINIGFPNEFDK 132 LL Y I G K GD++ P G Y+I N + ++ + +PN D Sbjct: 130 LLANYYISVGKAGVG-KNVEGDQRTPLGAYFITSNLDPTSLKDLYGSGALPVNYPNVLDL 188 Query: 133 AHNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIVR 168 +TG + +HG + + GC A+ N + I V Sbjct: 189 RRGKTGGGIWLHGTPSTQFTRAPQATDGCVAVANPDLLRIINTVE 233 >gi|239817408|ref|YP_002946318.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus S110] gi|239803985|gb|ACS21052.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus S110] Length = 374 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 14/158 (8%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 +A + Q S I + + + L + N D L+ +Y + Sbjct: 83 SRRRLQALRDRPPAGTVPSQFLALSTRSRYAIAVDASRSRLYL-LENSDKGLQLVADYYV 141 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP---NSKYFLSINIGFPNEFDKAHNRTGA 139 G K GD + P G YY+ + + ++ I +PN +D +TG+ Sbjct: 142 SVGKSGIG-KATEGDARTPLGVYYVTSSLDPKSLRDFYGAGALPINYPNPYDVRRGKTGS 200 Query: 140 DLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168 + +HG AS GC M N ++++ V+ Sbjct: 201 GIWLHGTPPQQFSRAPLASDGCVVMANPDLKQLLRKVQ 238 >gi|313681853|ref|YP_004059591.1| erfk/ybis/ycfs/ynhg family protein [Sulfuricurvum kujiense DSM 16994] gi|313154713|gb|ADR33391.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfuricurvum kujiense DSM 16994] Length = 317 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 24/189 (12%) Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K + +LE++ + + L K Y G K GD + P G Y + + Sbjct: 67 KEKGVLELYTPDAQKRFYLKKRYSAFTGKN-AGDKSVAGDLKTPIGIYTLVEKKKRVDPF 125 Query: 118 Y-FLSINIGFPNEFDKAHNRTGADLMIHG-------ECASAGCYAMNNKQMQEIYA---- 165 Y ++ +PN +D+ + G + +HG + + GC A+NN + ++ Sbjct: 126 YGPMAFVTSYPNLYDRVRGKNGTGIWVHGVPLSGTRDPFTKGCIAINNNDLIQLDQTINP 185 Query: 166 -----IVRDSLRGNMQSH------IQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDY 214 I+ SL+ +Q + + + T +++ Y + + SF +G Sbjct: 186 SNTLLIIDSSLKQGIQPTAYSAILAGLYQWKYAWTYNDIETYLSTYDPSFKRSDGMGFSQ 245 Query: 215 FEKNHQEPF 223 F+ + F Sbjct: 246 FKAYKERIF 254 >gi|253999957|ref|YP_003052020.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. SIP3-4] gi|253986636|gb|ACT51493.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. SIP3-4] Length = 404 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 18/180 (10%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + P VI + +++ L ++ +N+ + + +Y + K GD++ P G Sbjct: 138 QIDPTQKYVIVVDADKSRLYLY-QNIGGKPTYVADYYVTIGRNGS-EKSSEGDKRTPLGV 195 Query: 105 YYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMIHGECA---------SAGCY 153 Y + ++ + + +PNE+D+ + G + +HG + S GC Sbjct: 196 YTASSKLTSKLPDFYGSAAYPLSYPNEWDRQQGKKGHGIWLHGTPSNTYSRPPRASDGCV 255 Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213 ++N ++ + I++ I + + +T + Q W D Sbjct: 256 VISNPDLETLGPILQQG----GTPFIIVSQLKW-VTQAAPEQPQLQKALDQWRQDWQAQD 310 >gi|313201930|ref|YP_004040588.1| erfk/ybis/ycfs/ynhg family protein [Methylovorus sp. MP688] gi|312441246|gb|ADQ85352.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. MP688] Length = 404 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 18/180 (10%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + P VI + +++ L ++ +N+ + + +Y + K GD++ P G Sbjct: 138 QIDPTQKYVIVVDADKSRLYLY-QNIGGKPTYVADYYVTIGRNGS-EKSSEGDKRTPLGV 195 Query: 105 YYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMIHGECA---------SAGCY 153 Y + ++ + + +PNE+D+ + G + +HG + S GC Sbjct: 196 YTASSKLTSKLPDFYGRAAYPLSYPNEWDRQQGKKGHGIWLHGTPSNTYSRPPRASDGCV 255 Query: 154 AMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHD 213 ++N ++ + I++ I + + +T + Q W D Sbjct: 256 VISNPDLETLGPILQQG----GTPFIIVSQLKW-VTQAAPEQPQLQKALDQWRQDWQAQD 310 >gi|242309063|ref|ZP_04808218.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] gi|239524487|gb|EEQ64353.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489] Length = 331 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 86/277 (31%), Gaps = 44/277 (15%) Query: 1 MTNRYNILLFALF-------IFLNGCHHSRSLIDKAEHPLSEN------LIISMQKKRTS 47 M + +L+ I + ++L K L L + Sbjct: 1 MKIIWLLLIAIFSYANEYEWIGIYRSGGVQALEQKINEVLQTKNYWQEVLKNQDTRFGYY 60 Query: 48 PFHPTVIRIFKNENILE-----IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102 + K+ LE ++ + L + G G K + GD P Sbjct: 61 ENLKYLFVATKDAPTLESPNLKLYALENNQWIEKLNTKSLVGSKG--GHKQKEGDLATPI 118 Query: 103 GFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCY 153 G Y + N + Y L+ + +PN +DK RTG + IHG + GC Sbjct: 119 GVYSLQARLSNLDQYYGPLAFSTSYPNLYDKLQKRTGYGIWIHGMPLNGNREELNTRGCI 178 Query: 154 AMNNKQMQEIYAIV--RDSLRGNMQSHI-------------QIQAFPFRMTSKNMQLYQN 198 A+ N + + I+ R++L + + + +++ Y Sbjct: 179 AIENNLLTSVDRIIDYRNTLLITFADDVEQTKKEDLATILADLFQWKEAWAKNDIKAYLA 238 Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + F + FE + F + K+ F K Sbjct: 239 FYDKDFIRYDGQKFEAFEDTKRRIFQKGEEKEIKFTK 275 >gi|261212665|ref|ZP_05926949.1| hypothetical protein VCJ_002941 [Vibrio sp. RC341] gi|260837730|gb|EEX64407.1| hypothetical protein VCJ_002941 [Vibrio sp. RC341] Length = 119 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 29/127 (22%) Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN 135 +++EY+I G K + GD++ PEG YY+ + + +S ++ +I+I +P+ D+ H Sbjct: 1 MVREYRIALGKSPKGHKQQEGDQRTPEGNYYLDF--ITQDSHFYRAIHISYPSPQDERHA 58 Query: 136 R-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176 G D+ IHG + GC A+ N +M + ++V Q Sbjct: 59 AQLGVSPGGDIKIHGLKNGETADPAFIQSFDWTNGCIALTNSEMDDFLSLV--------Q 110 Query: 177 SHIQIQA 183 I Sbjct: 111 PGTPIHI 117 >gi|261250849|ref|ZP_05943423.1| hypothetical protein VIA_000867 [Vibrio orientalis CIP 102891] gi|260937722|gb|EEX93710.1| hypothetical protein VIA_000867 [Vibrio orientalis CIP 102891] Length = 127 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 21/113 (18%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134 ++KE++I G K+ GD++ PEG YY+ + +S ++ SI+I +PN D A+ Sbjct: 8 QVIKEFRIALGKRPKGHKVYEGDQRTPEGRYYLDFVM--DSSDFYRSIHISYPNPNDVAY 65 Query: 135 NR-----TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIVR 168 G ++ IHG + GC A+ N++M E+ +V+ Sbjct: 66 ANKLNVSPGGNIKIHGLKNGETRPAKYIQSFDWTDGCIAITNQEMDELLKLVK 118 >gi|171058352|ref|YP_001790701.1| ErfK/YbiS/YcfS/YnhG family protein [Leptothrix cholodnii SP-6] gi|170775797|gb|ACB33936.1| ErfK/YbiS/YcfS/YnhG family protein [Leptothrix cholodnii SP-6] Length = 642 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 14/150 (9%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 SL +A L Q + +P ++ + + + L + + L+ + + Sbjct: 353 ASLRLQALRDLPPAGAWPKQVLQLAPSVRHLVAVDTSRSRLYVLENQPGGP-RLIAHHYV 411 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP---NSKYFLSINIGFPNEFDKAHNRTGA 139 S G K E GD++ P G YYI + ++ + +PN+ D+ RTGA Sbjct: 412 SIGSQGVG-KREEGDQRTPLGTYYITSKLDGKQLGDFYGAGALPLNYPNDHDRHLGRTGA 470 Query: 140 DLMIHGECA---------SAGCYAMNNKQM 160 ++ +HG + + GC + N + Sbjct: 471 NIWLHGTPSAQFARAPRATNGCIVLANDDL 500 >gi|162451714|ref|YP_001614081.1| hypothetical protein sce3442 [Sorangium cellulosum 'So ce 56'] gi|161162296|emb|CAN93601.1| hypothetical protein sce3442 [Sorangium cellulosum 'So ce 56'] Length = 178 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 33/144 (22%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 IRI K+E+ L++ +++ Y++ G GPK GD + P G Y + Sbjct: 38 IRIDKSEHTLDLVAGG-----KIVRSYRVALGPGGPGPKRYEGDRRTPVGTYRVAGRI-- 90 Query: 114 PNSKYFLSINIGFPNEFDKAH------------NRT-GADLMIHG------------ECA 148 N + + + +PNE D+A R G + IHG Sbjct: 91 -NGLFHRFLIVSYPNEEDRARFAELKRRGEVPPGRGVGHSIGIHGVGSAQLAGVHKESDW 149 Query: 149 SAGCYAMNNKQMQEIYAIVRDSLR 172 + GC A+++ ++ EI D + Sbjct: 150 TLGCIALDDDEIDEIARRTPDGAK 173 >gi|254469080|ref|ZP_05082486.1| ErfK/YbiS/YcfS/YnhG [beta proteobacterium KB13] gi|207087890|gb|EDZ65173.1| ErfK/YbiS/YcfS/YnhG [beta proteobacterium KB13] Length = 393 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 14/159 (8%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFH-PTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81 + E L I + T P +I + N++ L +++ + EY Sbjct: 100 DEAKKRIESHLHSATDIIKSARVTLPESIKNLIYVDTNKSRLYLFEIKNHTLIKIFDEY- 158 Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGA 139 G K GD++ P G Y +G P S ++ + I +PN +DK N+TG Sbjct: 159 ASIGKNGSG-KNFEGDKKTPLGVYTLGKKITQPLSDFYGDGAFPIDYPNVYDKLLNKTGH 217 Query: 140 DLMIHGEC---------ASAGCYAMNNKQMQEIYAIVRD 169 + IHG +S GC ++N+ + + +I++D Sbjct: 218 GIWIHGTPKDTYSRAPKSSDGCIVISNENLNILESILKD 256 >gi|315638692|ref|ZP_07893866.1| conserved hypothetical secreted protein [Campylobacter upsaliensis JV21] gi|315481316|gb|EFU71946.1| conserved hypothetical secreted protein [Campylobacter upsaliensis JV21] Length = 323 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 94/272 (34%), Gaps = 42/272 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT--------------SP 48 R+ ++ A L+ + ++ + + + K Sbjct: 1 MRFLLVFMAFLSSLSASDLVKIYLNNGLDAVGAAIERELGNKDFWLEELGDKNLSLGYYT 60 Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 +++ KN+ IL+++ ++ ++ +G G K + GD + P GFY +G Sbjct: 61 QDVMIVKTNKNDKILKVFSYTNGKIKKEFEQKEV--ITGLMGDKEKEGDLKTPVGFYELG 118 Query: 109 WNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNK 158 + Y + +PN DK ++TG + IHG + GC A+ N Sbjct: 119 MKFSPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWIHGYPLDGTRLDEFKTRGCIALFND 178 Query: 159 QMQEIYAIV-----------RDSLRGNMQS----HIQIQAFPFRMTSKNMQLYQNNP-NY 202 ++++ +V +DS+R + + A+ + T ++ Y Sbjct: 179 KLEDFAKVVAGKKVYVLTEEKDSVRAKKEEIASLMADLFAWKYAWTVSDVNAYLAFYDEK 238 Query: 203 SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 F K F + F + +K F Sbjct: 239 DFKRFDKSSFSQFASMKKIIFARKEHKIIKFS 270 >gi|326317613|ref|YP_004235285.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374449|gb|ADX46718.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 437 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 19/161 (11%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 S +L + I + + I + + + L +++ L+ + Sbjct: 149 QRSDALRARPGARAIPAQFIELSAR-----SRHAIAVDASRSRLYLFQNTEQG-MELIAD 202 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSKYFLSINIGFPNEFDKAHNR 136 Y K GD++ P G Y+I + ++ I +PN D + + Sbjct: 203 YYASVGKLGI-EKALEGDQRTPLGVYFITSRLDPATLKDFYGAGALPINYPNPLDVSRGK 261 Query: 137 TGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168 TG+ + +HG ++ GC A+ N ++ I V Sbjct: 262 TGSGIWLHGTPPEQFSRAPLSTDGCLALANPDLERILRTVE 302 >gi|117926285|ref|YP_866902.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] gi|117610041|gb|ABK45496.1| ErfK/YbiS/YcfS/YnhG [Magnetococcus sp. MC-1] Length = 415 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 14/130 (10%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 S H VI + + L ++ N + L+ +Y I + KI+ GD++ P G Y Sbjct: 147 LSKRHSHVIAVDLTRSRLFLF-DNREGMPKLIADYYISSGKKGA-EKIKQGDKRTPAGLY 204 Query: 106 YIG---WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA---------SAGCY 153 Y+ P+ ++ I +PNE+D+ H RTG + +HG + S GC Sbjct: 205 YVTEYIPGEKLPDLYGAGAMPINYPNEWDRLHKRTGYGIWLHGTVSGTYSRPPRASDGCV 264 Query: 154 AMNNKQMQEI 163 A+ N +E+ Sbjct: 265 ALTNLDFEEL 274 >gi|254562322|ref|YP_003069417.1| hypothetical protein METDI3936 [Methylobacterium extorquens DM4] gi|254269600|emb|CAX25571.1| conserved hypothethical protein [Methylobacterium extorquens DM4] Length = 182 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 63/186 (33%), Gaps = 33/186 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R I + + G L+ ++ + + K Sbjct: 1 MGRRGRIAALIGGLAVLGAGAVVLADVFQVGRTEPPLVAEAERAD-------RVLVEKAA 53 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + + +L Y I G K GD + PEG Y + + NP S L Sbjct: 54 RRLTLLREG-----RVLATYPISLGFAPEGHKAREGDGRTPEGVYAVAFR--NPRSVAHL 106 Query: 121 SINIGFPNEFDKAH----NR-TGADLMIHG--------------ECASAGCYAMNNKQMQ 161 S+ + +P+ D A G D+MIHG + + GC + N +M+ Sbjct: 107 SLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNGFSWLGRLHRLKDWTQGCVGVTNAEMR 166 Query: 162 EIYAIV 167 IYA V Sbjct: 167 AIYARV 172 >gi|283852469|ref|ZP_06369737.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. FW1012B] gi|283572077|gb|EFC20069.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. FW1012B] Length = 456 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 25/169 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +L A F+ + C + + + K Sbjct: 1 MKRTGRVLALACFLLVLPCRWAAGEWTA-------------DIVDMEASPSRFVAVDKKA 47 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSK 117 + + + LL CA G K + GD + PEG Y+I LN Sbjct: 48 QSFALL--SRQSPLRLLAAIP-CATGQELGDKFKEGDLKTPEGVYFITRRKTAGLNYELY 104 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQM 160 L+ + FPN D ++G + IHG + GC A++ + Sbjct: 105 GDLAFPLNFPNPADVVRRKSGHGIWIHGRGHAIIPYETQGCVALSTPDI 153 >gi|120610990|ref|YP_970668.1| ErfK/YbiS/YcfS/YnhG [Acidovorax citrulli AAC00-1] gi|120589454|gb|ABM32894.1| ErfK/YbiS/YcfS/YnhG [Acidovorax citrulli AAC00-1] Length = 437 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 14/166 (8%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 L A I Q S I + + + L +++ Sbjct: 139 VLAELRAESRQRSDALRVRPGARAIPAQFIELSARSRHAIAVDASRSRLYLFQNTEQG-M 197 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSKYFLSINIGFPNEFD 131 L+ +Y K GD++ P G Y+I + ++ I +PN D Sbjct: 198 ELIADYYASVGKLGI-EKALEGDQRTPLGVYFITSRLDPATLKDFYGAGALPINYPNPLD 256 Query: 132 KAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168 + +TG+ + +HG ++ GC A+ N ++ I V Sbjct: 257 VSRGKTGSGIWLHGTPPEQFSRAPLSTDGCLALANPDLERILRTVE 302 >gi|258406579|ref|YP_003199321.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfohalobium retbaense DSM 5692] gi|257798806|gb|ACV69743.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfohalobium retbaense DSM 5692] Length = 304 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 26/163 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +R+ +L A F+ C P+S + + K E Sbjct: 1 MGHRFALLAGAWTTFIL-CFFPSPAPGWEVPPVSPE-----------HGPACFLVVEKAE 48 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN--LNPNSKY 118 L +W + V C+ + G K GD PEG Y++ L Sbjct: 49 QRL-VWTNATSTQLVW-----QCSTGSSGGDKWREGDLATPEGVYFMTRRQTGLPEKLYG 102 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAM 155 L+ + +PN D+ +TG + +HG + GC A+ Sbjct: 103 NLAFPLNYPNPVDRLRGKTGYGIWLHGRGKPLVPRDTRGCIAL 145 >gi|312881783|ref|ZP_07741557.1| hypothetical protein VIBC2010_06459 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370534|gb|EFP98012.1| hypothetical protein VIBC2010_06459 [Vibrio caribbenthicus ATCC BAA-2122] Length = 157 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 63/137 (45%), Gaps = 26/137 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++++ K++ L + + + E++I G K E GD++ PEG YY+ + Sbjct: 21 LVKVDKSKRRLYLIENE-----RITHEFRIALGKQPKGHKSEQGDQRTPEGRYYLQFIL- 74 Query: 113 NPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCY 153 +S+++ SI+I +P+ D+ G ++ IHG + GC Sbjct: 75 -EDSEFYRSIHISYPSLDDRLGAMIFNRDPGGNIKIHGLRNGENRPAQFVQSFDWTNGCI 133 Query: 154 AMNNKQMQEIYAIVRDS 170 A++N+ M ++V++ Sbjct: 134 ALSNQDMDTFLSLVKEG 150 >gi|240139898|ref|YP_002964375.1| hypothetical protein MexAM1_META1p3361 [Methylobacterium extorquens AM1] gi|240009872|gb|ACS41098.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 182 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 65/190 (34%), Gaps = 41/190 (21%) Query: 1 MTNR-YNILLFALFIFLNG---CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56 M R + L S + + E PL + + + + Sbjct: 1 MGRRGRIAAVIGGLAVLGAGAVVLADFSQVGRTEPPLVAEAERADR-----------VLV 49 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 K L + + +L Y I G K GD + PEG Y I + NP S Sbjct: 50 EKAARRLTLLREG-----RVLATYPISLGFVPEGHKAREGDGRTPEGVYAIAFR--NPRS 102 Query: 117 KYFLSINIGFPNEFDKAH----NR-TGADLMIHG--------------ECASAGCYAMNN 157 LS+ + +P+ D A G D+MIHG + + GC + N Sbjct: 103 VAHLSLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNGFSWLGRLHRLKDWTQGCVGVTN 162 Query: 158 KQMQEIYAIV 167 +M+ IYA V Sbjct: 163 AEMRAIYARV 172 >gi|78486093|ref|YP_392018.1| ErfK/YbiS/YcfS/YnhG [Thiomicrospira crunogena XCL-2] gi|78364379|gb|ABB42344.1| Hypothetical protein Tcr_1752 [Thiomicrospira crunogena XCL-2] Length = 375 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 17/144 (11%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 P ++ + + L ++++N + Y + Y + G K GD + P G Y I Sbjct: 144 EPYLVIVDSAAHRLYLYQKNENG-YEEVANYYVSIGQKGTG-KQVRGDLKTPIGIYKIEK 201 Query: 110 NNLN---PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNN 157 + P ++ + +PN +DK RTG+ + +HG AS GC +NN Sbjct: 202 ELSDSKLPELYGVAALTLNYPNSWDKQKGRTGSGIWLHGTPRSTYSRPPLASRGCVVLNN 261 Query: 158 KQMQEI---YAIVRDSLRGNMQSH 178 MQ + Y + + QS Sbjct: 262 PAMQTLIYQYRLAPATPVIIAQSA 285 >gi|224373456|ref|YP_002607828.1| putative periplasmic protein [Nautilia profundicola AmH] gi|223588865|gb|ACM92601.1| putative periplasmic protein [Nautilia profundicola AmH] Length = 319 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 49/262 (18%) Query: 3 NRYNILLFALFIFLNGC------HHSRSLIDKAEHPLSENL--IISMQKKRTSPF----- 49 R+ IL F++ + S +L + E L + +Q K + Sbjct: 1 MRFLILFLVTFLYSANLIDIYRFNGSDALSEHIEKILGSKTYWLERLQNKDVTWGYYETQ 60 Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 ++ + K++ IL+I+ N D+ + L+ K+ G K + GD + P G Y + Sbjct: 61 KDILVCV-KSKKILKIF-ENNDSTFKLIDTVKVLTGL--DGDKKKEGDLKTPIGVYKLKG 116 Query: 110 NNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHG--------ECASAGCYAMNNKQM 160 N +S Y + G+PN FDK +++ G + IHG + + GC M+N ++ Sbjct: 117 LIENVDSFYGPFAFVTGYPNLFDKINHKNGHGIWIHGVPLEGKRDDNNTKGCIVMDNNKL 176 Query: 161 QEI---------YAIVRD--SLRGNMQSHIQIQAFPFRMTSKNM----QLYQNNPNYSF- 204 ++ Y ++ + L + I AF ++ M + Y+N + SF Sbjct: 177 LQLKNEINYKDTYLLISENVPLTATKEEIASILAFIYKWRKAWMNNDFESYKNFYDESFK 236 Query: 205 ---WNMLKLGHDY----FEKNH 219 LK DY FE Sbjct: 237 KSDGKDLKEFLDYKKRVFENKK 258 >gi|312892133|ref|ZP_07751631.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM 18603] gi|311295384|gb|EFQ72555.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM 18603] Length = 173 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 26/131 (19%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + K+ L ++ + L+K Y I S G K D + P+G Y+I N Sbjct: 38 MIAIKSRRQLLVYAQG-----KLIKTYAISLGSCPAGKKQFEHDGKTPDGVYFINAK--N 90 Query: 114 PNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGE--------------CASAGCYA 154 PNS ++ I +PN+ D + TG D+ IHG +AGC A Sbjct: 91 PNSVCHKNLGISYPNQADVQQAKKFKLPTGGDIKIHGLTNGLGFIGKFHRWYNWTAGCIA 150 Query: 155 MNNKQMQEIYA 165 + N ++ ++Y+ Sbjct: 151 LTNAEIDDLYS 161 >gi|89094583|ref|ZP_01167521.1| ErfK/YbiS/YcfS/YnhG protein [Oceanospirillum sp. MED92] gi|89081182|gb|EAR60416.1| ErfK/YbiS/YcfS/YnhG protein [Oceanospirillum sp. MED92] Length = 402 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 16/143 (11%) Query: 30 EHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89 E P S L M + SP VI + + L ++ N + VL++++ G Sbjct: 116 EKPSSNMLPADM--MKLSPSQKHVIVVDTRLSRLFLF-ENQNGVPVLVEDFYASYGRGGT 172 Query: 90 GPKIETGDEQAPEGFYYIGWNNLN---PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE 146 G K++ GD + P G Y+I + P+ ++ I +PN +D+ +TG + +HG Sbjct: 173 G-KVKQGDLKTPLGVYFITNRLEDEKLPSRYGSGALPINYPNVWDQRLGKTGNGIWLHGS 231 Query: 147 CA---------SAGCYAMNNKQM 160 S GC ++ N Sbjct: 232 PVETYSRPPKASEGCISLTNPDF 254 >gi|332530129|ref|ZP_08406078.1| erfk/ybis/ycfs/ynhg family protein [Hylemonella gracilis ATCC 19624] gi|332040399|gb|EGI76776.1| erfk/ybis/ycfs/ynhg family protein [Hylemonella gracilis ATCC 19624] Length = 432 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 59/168 (35%), Gaps = 17/168 (10%) Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR----NVD 71 L H + A + Q +P I + + L +++ N Sbjct: 123 LAELRHESEVRLAALRERPPAGAVPTQFLALAPNVRHAIAVDASRARLYLFENQAQANEG 182 Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN---PNSKYFLSINIGFPN 128 A L+ +Y + K GD + P G Y+ PN ++ I +PN Sbjct: 183 ARMRLIADYYVSVGKYGI-EKTTEGDARTPLGVYFTLHRLDKRSLPNFYGAGALPINYPN 241 Query: 129 EFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIV 167 D+ +TG+ + +HG A+ GC +++ ++ + V Sbjct: 242 ILDRRRGKTGSGIWLHGTPPNQFARAPLATNGCVVLSDPDLEHVLRTV 289 >gi|118474716|ref|YP_892715.1| putative periplasmic protein [Campylobacter fetus subsp. fetus 82-40] gi|118413942|gb|ABK82362.1| putative periplasmic protein [Campylobacter fetus subsp. fetus 82-40] Length = 322 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 97/272 (35%), Gaps = 41/272 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------SPF 49 ++ I + FL + ++ + + + ++Q K Sbjct: 2 KKFLIFVLCFLSFLYSKDLEKIYLESGIEAVQKAIEANLQSKDYWQKHLSQMDLKYGYYD 61 Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 I + + D + ++K+ G K+ GD + P G Y I Sbjct: 62 SDIFIVVVDKKAKNFYLNEYKDGKLDSKADHKVLTGL--MGDKLLEGDLKTPVGVYEITR 119 Query: 110 NNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC----------ASAGCYAMNNK 158 + ++ Y ++ N+ +PN FDK +RTG + IHG + GC M N Sbjct: 120 RFVPEDTYYGPVAFNLSYPNLFDKLRDRTGGGIWIHGFPLNGNIREDVYKTKGCVVMPND 179 Query: 159 QMQEIYAIVRD--SLRGNMQSHI-------------QIQAFPFRMTSKNMQLYQNNPNYS 203 + + +I++D + +S I ++ + T+ ++ Y + + Sbjct: 180 LLLNLESILKDNGGMVLINESGILEAKNEDIALIFAELFKWKEAWTNSDIDRYLSFYDKK 239 Query: 204 FWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 F +G D F++ + F + NK F K Sbjct: 240 FKRYDGVGFDKFKEMKKNIFSRKENKFIQFTK 271 >gi|303246802|ref|ZP_07333079.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio fructosovorans JJ] gi|302491819|gb|EFL51699.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio fructosovorans JJ] Length = 741 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 56/169 (33%), Gaps = 26/169 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M I+ A + + G S + + K Sbjct: 1 MKRIGPIIAAACLVLVCGSRASGEWTADIV--------------DMDSTPSRFVAVDKKA 46 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSK 117 + + + +L E CA G K + GD + PEG Y+I LN + Sbjct: 47 QSFALL--SRHSPLRVLTEIP-CATGQALGDKFKEGDLKTPEGVYFITRRKSSGLNFDLY 103 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQM 160 L+ + FPN D +++G + IHG + GC A++ + Sbjct: 104 GDLAFPLDFPNPADVLRHKSGHGIWIHGRGHPITPYETQGCVALSMANI 152 >gi|331007095|ref|ZP_08330318.1| ErfK/YbiS/YcfS/YnhG [gamma proteobacterium IMCC1989] gi|330419090|gb|EGG93533.1| ErfK/YbiS/YcfS/YnhG [gamma proteobacterium IMCC1989] Length = 312 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 65/177 (36%), Gaps = 21/177 (11%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 +T R L LF + + ++ + + +P VI + Sbjct: 2 ITIRNIFLGLLLFSSMVSAETPDFSLQ------PDHTMQPASLVDIADSYPHVIISELST 55 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYF 119 L ++KR D ++LL+ +G K GD + P G Y I + ++ Sbjct: 56 GKLYVYKRQADGSFLLLETMHTSIGKKGYG-KNIEGDNKTPVGVYRITSHLTPEQLDAFY 114 Query: 120 L--SINIGFPNEFDKAHNRTGADLMIHGEC-----------ASAGCYAMNNKQMQEI 163 + + +PN +DK + RTG + +H E S GC ++N + I Sbjct: 115 GNAAYPVNYPNAWDKINERTGYGIWLHAEPIGLTTKTRPLLDSNGCIVLSNNDIDII 171 >gi|325294451|ref|YP_004280965.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064899|gb|ADY72906.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 353 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 89/239 (37%), Gaps = 37/239 (15%) Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 + + S+ + + + LI ++ P I + K IL + K + Sbjct: 54 LLLFSYAGESKEVRKLIKKAYPKRLISNVL---ILPPSINAIIVDKTREILYVIKMDKSI 110 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY-IGWNNLNPNSKYFLSINIGFPNEFD 131 ++K++ C G K+E GD + PEG Y+ + W P + + +PN D Sbjct: 111 P-HVIKKFP-CITGKKLGDKLEEGDLRTPEGIYFPLYWRTNLPKLYGIGAFPLNYPNLID 168 Query: 132 KA-HNRTGADLMIHGEC-------ASAGCYAMNNKQMQEIYAIVRDSL------------ 171 K R G + IHG ++ GC + N+ ++E+ ++ L Sbjct: 169 KKVLKRNGHGIWIHGTNDPNRPPHSTNGCIVLKNEYLKELKKLIDPKLTPVIVVTTVNYV 228 Query: 172 --RGNMQSHIQIQAFPFRM------TSKNMQLYQNNPNYSF-WNMLKLGHDYFEKNHQE 221 + + I +F R T KN++ Y + + F W K + + + + Sbjct: 229 ERKKYINEKKSILSFILRWKKAWENTPKNLKSYFSFYSKHFVWK--KGNYKDWIRYKKR 285 >gi|218531404|ref|YP_002422220.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium chloromethanicum CM4] gi|218523707|gb|ACK84292.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium chloromethanicum CM4] Length = 182 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 63/186 (33%), Gaps = 33/186 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R I + + G L+ ++ + + K Sbjct: 1 MGRRGRIAAVIGGLAVLGAGAVVLADVSQVGRTEPPLVAEAERAD-------RVLVEKAA 53 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + + +L Y I G K GD + PEG Y + + NP S L Sbjct: 54 RRLTLLREG-----RVLATYPISLGFAPEGHKARDGDGRTPEGVYAVAFR--NPRSVAHL 106 Query: 121 SINIGFPNEFDKAH----NR-TGADLMIHG--------------ECASAGCYAMNNKQMQ 161 S+ + +P+ D A G D+MIHG + + GC + N +M+ Sbjct: 107 SLKVSYPSPADAAAAQAGGYSPGGDIMIHGLMNGFSWLGRLHRLKDWTQGCVGVTNAEMR 166 Query: 162 EIYAIV 167 IYA V Sbjct: 167 AIYARV 172 >gi|315637664|ref|ZP_07892870.1| conserved hypothetical protein [Arcobacter butzleri JV22] gi|315478118|gb|EFU68845.1| conserved hypothetical protein [Arcobacter butzleri JV22] Length = 323 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 78/208 (37%), Gaps = 25/208 (12%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 VI K + ++ +N D + K+ I G K GD++ PEG Sbjct: 61 GFYETKEYVIVAEKENKKMTLFAKNGDDYKQISKDSMIV--GEKAGDKFLEGDKKTPEGA 118 Query: 105 YYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC-------ASAGCYAMN 156 + + + Y ++ +PN FDK+ ++ G + IHG + GC A++ Sbjct: 119 FELVQKRTGLDQFYGPFALVTEYPNTFDKSLDKKGHGIWIHGMPFNGDREKFTQGCLALD 178 Query: 157 NKQMQEIYAIVR----------DSLRGNMQSHI-----QIQAFPFRMTSKNMQLYQNNPN 201 N++++ + + D + ++ I I + N++ Y + + Sbjct: 179 NEKLETLAKNIDYKKTVLITSGDEFKKASKNDIALILSSIYKWKDAWKYSNIEEYLSFYS 238 Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINK 229 F + FE ++ F + +K Sbjct: 239 KDFKRADQSDFKKFETQKRQIFAKNESK 266 >gi|300311193|ref|YP_003775285.1| hypothetical protein Hsero_1868 [Herbaspirillum seropedicae SmR1] gi|300073978|gb|ADJ63377.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 399 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 61/153 (39%), Gaps = 14/153 (9%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 ++ + +I + V+ + + + ++ N E ++ I Sbjct: 112 RSLQEKPDPNLIPKAVLQVGEDQKNVLVVDTTRSRMYVY-ENQGGELKFQTDFYISQGRF 170 Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNP---NSKYFLSINIGFPNEFDKAHNRTGADLMIH 144 K ++GD++ P G YY+ P + ++ + +PNE+DK + R+G + +H Sbjct: 171 GA-NKSKSGDQRTPIGVYYVNNRIPGPKLPDFYGTGALPLSYPNEWDKRNGRSGYGIWLH 229 Query: 145 GEC---------ASAGCYAMNNKQMQEIYAIVR 168 G +S GC + N +Q +Y+ Sbjct: 230 GTPSDNFSRPPLSSDGCVVLANPDLQSLYSTAE 262 >gi|221066750|ref|ZP_03542855.1| ErfK/YbiS/YcfS/YnhG family protein [Comamonas testosteroni KF-1] gi|220711773|gb|EED67141.1| ErfK/YbiS/YcfS/YnhG family protein [Comamonas testosteroni KF-1] Length = 438 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 14/165 (8%) Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 L G H + + E I + I I +++ L ++ N D + Sbjct: 141 LAGLHDEIRRRVQGADSVPETGSIPSEFLMLDASVRQAIAIDASKSRLYLFA-NEDGRFR 199 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW---NNLNPNSKYFLSINIGFPNEFDK 132 ++ + + G K E GD++ P+G Y+IG P ++ + +PN++D+ Sbjct: 200 VVGNFYVSVGKLGLG-KKEEGDQRTPQGLYFIGRQIPGMKLPEFYGLGALTMNYPNDWDR 258 Query: 133 AHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168 R+G+ + +HG AS GC + N + + V Sbjct: 259 VVGRSGSGIWLHGTPPDQYARLPEASDGCVVLANPDLDFLMQTVE 303 >gi|109947439|ref|YP_664667.1| hypothetical protein Hac_0886 [Helicobacter acinonychis str. Sheeba] gi|109714660|emb|CAJ99668.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 330 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 72/227 (31%), Gaps = 28/227 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ N D + K S G K Sbjct: 51 TEELQNKDTDFGYYQNKQFLFVADKSKPNLEFYEIN-DNMLKKINGSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQM---QEIYAIVRDSLRGNMQSHI-------------QIQAFPFRM 188 + GC A+ N+ + +I + + + + Sbjct: 169 NELNTKGCIAIENQLLSSYDKILK-GEKAFLITYEDKFFPSTKEELAMILSTLFQWKDAW 227 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 T + + Y + N +F + + F++ + F + K F Sbjct: 228 TKGDFERYMSFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|116750933|ref|YP_847620.1| hypothetical protein Sfum_3514 [Syntrophobacter fumaroxidans MPOB] gi|116699997|gb|ABK19185.1| hypothetical protein Sfum_3514 [Syntrophobacter fumaroxidans MPOB] Length = 157 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 39/154 (25%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 S I ++K++ L + VL++EY I G K GD + PEG + Sbjct: 1 MSLVSNPKIYVYKSDRRLLLVNNG-----VLVREYPIGLGFSPNGDKFMRGDGRTPEGQF 55 Query: 106 YIGWNNLNPNSKYFLSINIGFP--------------------NEFDKAHNRT-------- 137 +I NPNS+++ S+ + +P N + + + Sbjct: 56 FICAK--NPNSRFYKSLGLNYPDPRHAEKALVWGAISLEDFRNIVEASEGKRRPPSNTVL 113 Query: 138 GADLMIHGE----CASAGCYAMNNKQMQEIYAIV 167 G D+ IHG + GC A+ N M E+++IV Sbjct: 114 GGDIFIHGGGAGRDWTWGCVAVRNSAMDELFSIV 147 >gi|163756857|ref|ZP_02163966.1| hypothetical protein KAOT1_10501 [Kordia algicida OT-1] gi|161323246|gb|EDP94586.1| hypothetical protein KAOT1_10501 [Kordia algicida OT-1] Length = 189 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 74/200 (37%), Gaps = 36/200 (18%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + LLF I L + SE + + +TS I I K++ Sbjct: 1 MKAFTLLFVSLITLFCVQSCKRETANKNAKTSETTLKQLLPAKTS----IRILIDKSDYT 56 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L ++ + L+K+Y + K + GD++ PEG + + + P+ + I Sbjct: 57 LSVFTADT-----LVKKYNVVFGGNPVDDKEKEGDKRTPEGVFGV--RDKYPHRSWSKFI 109 Query: 123 NIGFPNE--FDKAHNRT-----------GADLMIHGEC------------ASAGCYAMNN 157 I +PN+ + K + R G ++ IHG + GC +M N Sbjct: 110 WIDYPNKSSWKKFNQRKANGIIKEGETIGGEVGIHGVPEGMDHMIDTKQNWTLGCISMKN 169 Query: 158 KQMQEIYAIVRDSLRGNMQS 177 + EIY + + +Q Sbjct: 170 SDVNEIYPYITKKTQITIQK 189 >gi|315124402|ref|YP_004066406.1| hypothetical protein ICDCCJ07001_861 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018124|gb|ADT66217.1| hypothetical protein ICDCCJ07001_861 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 303 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 29/215 (13%) Query: 47 SPFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 60 YYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFY 117 Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAM 155 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 118 ELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 177 Query: 156 NNKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNP 200 N +++ +V+D + + + T+ + Y + Sbjct: 178 FNNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFY 237 Query: 201 NY-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + F K+ + F + F + +K+ F Sbjct: 238 DEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|148926588|ref|ZP_01810270.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845282|gb|EDK22376.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 325 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 29/215 (13%) Query: 47 SPFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 60 YYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFY 117 Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAM 155 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 118 ELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 177 Query: 156 NNKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNP 200 N +++ +V+D + + + T+ + Y + Sbjct: 178 FNNNLEKFAKVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNAYLSFY 237 Query: 201 NY-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + F K+ + F + F + +K+ F Sbjct: 238 DEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|224418109|ref|ZP_03656115.1| hypothetical protein HcanM9_02416 [Helicobacter canadensis MIT 98-5491] gi|313141644|ref|ZP_07803837.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|313130675|gb|EFR48292.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 331 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 26/201 (12%) Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 L+++ L + G G K + GD P G Y + +N + Y Sbjct: 77 ESPKLKLYALENGKWVERLNANSLVGSKG--GNKQKEGDLATPIGVYTLEKRLVNLDQYY 134 Query: 119 -FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV-- 167 L+ +PN +D+ RTG + IHG + GC A+ N + + I+ Sbjct: 135 GPLAFTTSYPNLYDRLQKRTGYGIWIHGMPLNGNREELNTRGCIAIENNLLTTVDQIIDY 194 Query: 168 RDSLRGNMQSHI------QIQA-------FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDY 214 RDSL + I ++ + + + Y + F ++ Sbjct: 195 RDSLLITFSNEIKEVKKQDLEIILSNLFQWKEAWKNNVIDTYLSFYGEDFIRYDGQKYNA 254 Query: 215 FEKNHQEPFIQIINKQYVFFK 235 F ++ F + K F K Sbjct: 255 FAAVKRQIFGKGEEKNIQFNK 275 >gi|205356391|ref|ZP_03223156.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205345776|gb|EDZ32414.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 311 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 29/215 (13%) Query: 47 SPFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 46 YYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFY 103 Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAM 155 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 104 ELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 163 Query: 156 NNKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNP 200 N +++ +V+D + + + T+ + Y + Sbjct: 164 FNNNLEKFAKVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNAYLSFY 223 Query: 201 NY-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + F K+ + F + F + +K+ F Sbjct: 224 DEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 258 >gi|154174131|ref|YP_001408672.1| putative periplasmic protein [Campylobacter curvus 525.92] gi|112802069|gb|EAT99413.1| putative periplasmic protein [Campylobacter curvus 525.92] Length = 321 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 27/180 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKK--------------RTSP 48 + F L L+ ++ + + + + ++ K Sbjct: 2 KKIIFPFFILAASLSAQNYEDIYLKSGADAVIKAIEKNILSKEYWAKRLDGKDVKYGYYD 61 Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 + + K + LE+ + L + + G G K+ GD + P G Y + Sbjct: 62 NEVLLAVVDKTDKKLEVLSYDNG---KLERVFDTGVIVGKSGDKLLEGDLKTPVGVYQLT 118 Query: 109 WNNLNPNSK-YFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNK 158 + L+ ++ +PN DK R G + IHG + GC AM N Sbjct: 119 RRFTPSDPYLGPLAFSLSYPNLLDKLAKRNGGGIWIHGYPLDGQRTDELKTKGCVAMEND 178 >gi|153952096|ref|YP_001398022.1| hypothetical protein JJD26997_0906 [Campylobacter jejuni subsp. doylei 269.97] gi|152939542|gb|ABS44283.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei 269.97] Length = 325 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 29/215 (13%) Query: 47 SPFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 60 YYDDNVAIVLTNKTDKILRVYSYEDGKIKKDFEQKEI--ITGLMGDKKIEGDLKTPVGFY 117 Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAM 155 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 118 ELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 177 Query: 156 NNKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNP 200 N +++ +V+D + + + T+ + Y + Sbjct: 178 FNNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFY 237 Query: 201 NY-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + F K+ + F + F + +K+ F Sbjct: 238 DEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|86150191|ref|ZP_01068418.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597483|ref|ZP_01100717.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562526|ref|YP_002344305.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839307|gb|EAQ56569.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190075|gb|EAQ94050.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360232|emb|CAL35027.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926140|gb|ADC28492.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni IA3902] gi|315929852|gb|EFV09015.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni 305] Length = 325 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 29/215 (13%) Query: 47 SPFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 60 YYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFY 117 Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAM 155 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 118 ELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 177 Query: 156 NNKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNP 200 N +++ +V+D + + + T+ + Y + Sbjct: 178 FNNNLEKFAKVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNAYLSFY 237 Query: 201 NY-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + F K+ + F + F + +K+ F Sbjct: 238 DEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|283956251|ref|ZP_06373731.1| hypothetical protein C1336_000250022 [Campylobacter jejuni subsp. jejuni 1336] gi|283791971|gb|EFC30760.1| hypothetical protein C1336_000250022 [Campylobacter jejuni subsp. jejuni 1336] Length = 325 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 73/207 (35%), Gaps = 28/207 (13%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + K + IL ++ ++ +I +G G K GD + P GFY +G Sbjct: 68 VLANKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFYELGRKFNP 125 Query: 114 PNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEI 163 + Y + +PN DK +TG + IHG + GC A+ N +++ Sbjct: 126 GDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIALFNNNLEKF 185 Query: 164 YAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNPNY-SFWNM 207 +V+D + + + T+ + Y + + F Sbjct: 186 AQVVQDKKVFVMTEEKEKTRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFYDEQEFKRF 245 Query: 208 LKLGHDYFEKNHQEPFIQIINKQYVFF 234 K+ + F + F + +K+ F Sbjct: 246 DKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|149926797|ref|ZP_01915056.1| ErfK/YbiS/YcfS/YnhG [Limnobacter sp. MED105] gi|149824349|gb|EDM83567.1| ErfK/YbiS/YcfS/YnhG [Limnobacter sp. MED105] Length = 422 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 16/153 (10%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 KA + ++ + + VI + + L ++ N + L+ ++ + G Sbjct: 141 KAVKDRPQRDLLPAELVELNDDQRYVILVDTTRSRLFLY-ENSFPQPRLVTDFYVS--QG 197 Query: 88 TFGP-KIETGDEQAPEGFYYIG---WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMI 143 G K+ GD++ P G Y I + +++ I +PN +DK +TG + + Sbjct: 198 KMGAVKVREGDKRTPIGVYTITELLPKEKLTDFYGPIALPIDYPNAWDKRLGKTGYGIWL 257 Query: 144 HGECA---------SAGCYAMNNKQMQEIYAIV 167 HG S GC + N+ + + V Sbjct: 258 HGMPKHYVSRPPKASDGCVVLANQDLLALKKFV 290 >gi|86152147|ref|ZP_01070359.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85840932|gb|EAQ58182.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 325 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 29/215 (13%) Query: 47 SPFHPTVIRIF-KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 I + K + IL ++ ++ +I +G G K GD + P GFY Sbjct: 60 YYDDNVAIVLTNKTDKILRVYSYEDGKIRKDFEQKEI--ITGLMGDKKIEGDLKTPVGFY 117 Query: 106 YIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAM 155 +G + Y + +PN DK +TG + IHG + GC A+ Sbjct: 118 ELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDGSRLDEFKTRGCIAL 177 Query: 156 NNKQMQEIYAIVRD--SLRGNMQSH-------------IQIQAFPFRMTSKNMQLYQNNP 200 N +++ +V+D + + + T+ + Y + Sbjct: 178 FNNNLEKFAQVVQDKKVFVMTEEKEKIRAKKDQIASLLADLFTWKLAWTNSDTNTYLSFY 237 Query: 201 NY-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + F K+ + F + F + +K+ F Sbjct: 238 DEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFS 272 >gi|157163935|ref|YP_001466517.1| 60 kDa chaperonin (protein Cpn60; groEL protein) [Campylobacter concisus 13826] gi|112800637|gb|EAT97981.1| putative periplasmic protein [Campylobacter concisus 13826] Length = 321 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 81/276 (29%), Gaps = 49/276 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT-------------S 47 M AL L ++ + + E + ++ K Sbjct: 1 MKKILLF-FIALAPCLFAQNYEEIYLKNGPSAVIEAIEKNILSKDYWLEKLKDKDVRYGY 59 Query: 48 PFHPTVI-RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 + ++ + K + LE+ L G G K+ GD + P G Y Sbjct: 60 YDNEILLSVVDKTDKELEVISYKDGVTKKLFSS---SVIVGKNGDKLLEGDLKTPVGVYQ 116 Query: 107 IGWNNLNPNSK-YFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156 + + L+ ++ +PN DK R G+ + IHG + GC AM Sbjct: 117 LTRRFTPNDRYLGPLAFSLSYPNLLDKLSKRNGSGIWIHGYPLDGQRTDELKTKGCVAMQ 176 Query: 157 NK---QMQE----------IYAIVRDSLRGNMQSHIQIQA-----FPFRMTSKNMQLYQN 198 N + E IY D + I + + + ++ Y Sbjct: 177 NDILMKFDEVIDHKKTLAFIY---EDKRPEASANDIAVIISGILNWKKTWSESDIDSYLK 233 Query: 199 NPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 + F + + F+ + F + K F Sbjct: 234 FYDKDFERYDGMSLENFKNMKRAIFSKKEKKHIAFS 269 >gi|147667732|gb|ABQ45832.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 73/235 (31%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K VF I Sbjct: 224 KEAWVRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIVFSSISVI 278 >gi|46581348|ref|YP_012156.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120601474|ref|YP_965874.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris DP4] gi|46450770|gb|AAS97416.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str. Hildenborough] gi|120561703|gb|ABM27447.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris DP4] gi|311235007|gb|ADP87861.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris RCH1] Length = 429 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 22/164 (13%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 + AL L S + ++++ + + H + IF Sbjct: 11 ILALLFVLFAAATSSASDKGWNTAIADSDLTPRRILAVDKNHQRFL-IF----------- 58 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSKYFLSINIG 125 + L + C G K+ GD + PEG Y+I L+ ++ + Sbjct: 59 ERHSPLALRGTFP-CTTGQADGDKVAEGDLRTPEGIYFIEGKRTSGLDYGLYGGIAYTLN 117 Query: 126 FPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQEI 163 +PN D+ +++G + IH + + GC A+N + + Sbjct: 118 YPNPVDRLRHKSGYGIWIHSKGRDITPRETRGCIALNRGDIDAL 161 >gi|147667746|gb|ABQ45839.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 28/231 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHI-------------QIQAFPFRM 188 + GC A+ N + Y V + + + + Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKFFPSTKEELSMVLSSLFQWKEAW 227 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 T + + Y N +F + + F++ + F + K F I Sbjct: 228 TRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|319762809|ref|YP_004126746.1| erfk/ybis/ycfs/ynhg family protein [Alicycliphilus denitrificans BC] gi|330824889|ref|YP_004388192.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans K601] gi|317117370|gb|ADU99858.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans BC] gi|329310261|gb|AEB84676.1| ErfK/YbiS/YcfS/YnhG family protein [Alicycliphilus denitrificans K601] Length = 456 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 60/171 (35%), Gaps = 16/171 (9%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 A L+ L A I Q S I + + + L ++ N Sbjct: 154 AAIDTLSDLRAESRLRVDALKARPPQGSIPAQFLELSARTRHAIAMDASRSRLYLF-ENT 212 Query: 71 DAEYVLLKEYKICAWSGTFG-PKIETGDEQAPEGFYYIGWNN---LNPNSKYFLSINIGF 126 D VL+ +Y G G K GD++ P G YYI + ++ I + Sbjct: 213 DKGLVLVADYYASV--GKLGTEKQAEGDQRTPLGVYYITSRLDPATLKDFYGAGALPINY 270 Query: 127 PNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168 PN D +TG+ + +HG A+ GC + N ++ + V Sbjct: 271 PNPLDLRRGKTGSGIWLHGTPPSQFSRAPLATDGCLVLANPDLERLLKTVE 321 >gi|328953401|ref|YP_004370735.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM 11109] gi|328453725|gb|AEB09554.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM 11109] Length = 215 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 72/222 (32%), Gaps = 51/222 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSE---------------------NLII 39 M + L A +F+ G S+ + A P ++ Sbjct: 1 MRRIWLFLGVAALLFVMGGCSSQKPLVTAVPPEEMEADIEEEENIDPRYRADQRVVKEVL 60 Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99 R PTV+ + K L +++ LK Y + K+ GD Sbjct: 61 QENHYRKRGKKPTVLLVHKESRKLTVFRGTT-----PLKTYPVVLGRNPRNDKLRQGDMC 115 Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPN-------EFDKAHNR------TGADLMIHGE 146 PEG Y + P++K+ I + +P K + G ++ IHG Sbjct: 116 TPEGIYKVVCKF--PHAKWNKFILLNYPTTKNWLKFAEAKKRGKIPITADIGGEIGIHGT 173 Query: 147 ----------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQSH 178 + GC ++ NK + EIY ++ D +Q Sbjct: 174 EDDLKNLTGENWTLGCVSLRNKHLDEIYPLIEDGSLVVIQRK 215 >gi|317009506|gb|ADU80086.1| conserved hypothetical secreted protein [Helicobacter pylori India7] Length = 330 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + Y N +F + + F++ + F + K+ F Sbjct: 224 KEAWARGEFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKRIAFSS 274 >gi|89900141|ref|YP_522612.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens T118] gi|89344878|gb|ABD69081.1| ErfK/YbiS/YcfS/YnhG [Rhodoferax ferrireducens T118] Length = 414 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 16/171 (9%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 A L+ + KA + + Q S + I I + + L + + Sbjct: 113 AAAPVLDQLRDESQMRLKALRERPPSGALPSQFLALSARNKHAIAIDASRSRLYLLENRP 172 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS----KYFLSINIGF 126 L+ +Y + K GD + P G Y+I +NL+P S ++ I + Sbjct: 173 TG-LTLIADYYVSIGKSGLS-KNAEGDLRTPMGVYFIT-SNLDPKSLKDFYGSGALPINY 229 Query: 127 PNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIVR 168 PN D +TG + +HG A+ GC + N + + V Sbjct: 230 PNVLDNLRGKTGGGIWLHGTPPGQFSRPPLATDGCVVLANPDLMALIRTVE 280 >gi|147667744|gb|ABQ45838.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 28/231 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHI-------------QIQAFPFRM 188 + GC A+ N + Y V + + + + Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKFFPSTKEELSMVLSSLFQWKEAW 227 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 T + + Y N +F + + F++ + F + K F I Sbjct: 228 TRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|147667730|gb|ABQ45831.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 71/231 (30%), Gaps = 28/231 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQM---QEIYAIVRDSLRGNMQSHI-------------QIQAFPFRM 188 + GC A+ N + +I + + + + Sbjct: 169 NELNTKGCIAIENPLLSSYDKILK-GEKAFLITYEDKFFPSTKEELSMVLSSLFQWKEAW 227 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 T + + Y N +F + + F++ + F + K F I Sbjct: 228 TRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|261838238|gb|ACX98004.1| hypothetical protein KHP_0800 [Helicobacter pylori 51] Length = 330 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 70/230 (30%), Gaps = 28/230 (12%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 E L + K++ LE ++ + + + K S G K Sbjct: 52 EELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTL 109 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC------ 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 110 EGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRN 169 Query: 148 --ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHI-------------QIQAFPFRMT 189 + GC A+ N + Y V + + + + T Sbjct: 170 ELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKFFPSTKEELSMVLSSLFQWKEAWT 228 Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 229 GGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|147667736|gb|ABQ45834.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 70/230 (30%), Gaps = 28/230 (12%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 E L + K++ LE ++ + + + K S G K Sbjct: 52 EELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTL 109 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC------ 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 110 EGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRN 169 Query: 148 --ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHI-------------QIQAFPFRMT 189 + GC A+ N + Y V + + + + T Sbjct: 170 ELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKFFPSTKEELSMVLSSLFQWKEAWT 228 Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 229 RGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|157737873|ref|YP_001490557.1| hypothetical protein Abu_1640 [Arcobacter butzleri RM4018] gi|157699727|gb|ABV67887.1| conserved hypothetical protein [Arcobacter butzleri RM4018] Length = 323 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 25/208 (12%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 VI K + ++ +N D + K+ I G K GD++ PEG Sbjct: 61 GFYETKEYVIIAEKENKKMTLFAKNGDDYKQISKDSMIV--GEKAGDKFLEGDKKTPEGA 118 Query: 105 YYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC-------ASAGCYAMN 156 + + + Y ++ +PN FDK+ ++ G + IHG + GC A++ Sbjct: 119 FELVQKRTGLDQFYGPFALVTEYPNTFDKSLDKKGHGIWIHGMPFNGDREKFTQGCLALD 178 Query: 157 NKQMQEIYAIVR----------DSLRGNMQSHI-----QIQAFPFRMTSKNMQLYQNNPN 201 N++++ + + D + ++ I I + N++ Y + + Sbjct: 179 NEKLETLAKNIDYKKTVLITSGDEFKKASKNDIALILSSIYKWKDAWKYSNIEEYLSYYS 238 Query: 202 YSFWNMLKLGHDYFEKNHQEPFIQIINK 229 F + FE ++ F + K Sbjct: 239 KDFKRADQSDFKKFETQKRQIFAKNETK 266 >gi|317010762|gb|ADU84509.1| hypothetical protein HPSA_02490 [Helicobacter pylori SouthAfrica7] Length = 330 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 68/226 (30%), Gaps = 28/226 (12%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 E L + K++ LE ++ N D + K S G K Sbjct: 52 EELQNKDTDFGYYQNKQFLFVADKSKPNLEFYEIN-DNMLKKINSSKALVGS-KKGDKTL 109 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC------ 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 110 EGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRN 169 Query: 148 --ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHI-------------QIQAFPFRMT 189 + GC A+ N+ + Y + + + + Sbjct: 170 ELNTKGCIAIENQLLSS-YDKALKGEKAFLITYEDKFFPSTKEELSMILSALFQWKDAWA 228 Query: 190 SKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 229 KGDFERYMGFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|298530698|ref|ZP_07018100.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298510072|gb|EFI33976.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 421 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 13/134 (9%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 S + + K ++ ++++ G G K GD + PEG Sbjct: 26 GDSRAPEDLFVVDKKNQTFFVFSNKS--PLRKEYKWEVTTGEG-VGDKEVEGDLKTPEGI 82 Query: 105 YYI----GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYA 154 Y+I +L+ + + + + +PN D+A +TG + +HG + GC A Sbjct: 83 YFIERQIDTRHLDRDLYGEMGLTLNYPNPVDRAKGKTGFGIWLHGRGKEVVPFDTEGCVA 142 Query: 155 MNNKQMQEIYAIVR 168 M+ K M + +V+ Sbjct: 143 MDMKYMHRLEDMVQ 156 >gi|298736229|ref|YP_003728755.1| hypothetical protein HPB8_734 [Helicobacter pylori B8] gi|298355419|emb|CBI66291.1| conserved hypothetical secreted protein [Helicobacter pylori B8] Length = 330 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 28/227 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHI-------------QIQAFPFRM 188 + GC A+ N + Y V + + + + Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKFFPSTKEELSMILSSLFQWKEAW 227 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 T + + Y + +F + + F++ + F + K F Sbjct: 228 TRGDFERYMRFYSPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|317013935|gb|ADU81371.1| hypothetical protein HPGAM_02645 [Helicobacter pylori Gambia94/24] Length = 330 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 69/227 (30%), Gaps = 28/227 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQ---------IQAFPFRMTSK- 191 + GC A+ N + Y V + + + + F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMVLSSLFQWKEAW 227 Query: 192 ---NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N F + + F++ + F + K F Sbjct: 228 ARGDFERYMRFYNPDFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|317181838|dbj|BAJ59622.1| conserved hypothetical secreted protein [Helicobacter pylori F57] Length = 330 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 69/231 (29%), Gaps = 28/231 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHI-------------QIQAFPFRM 188 + GC A+ N + Y + + + + Sbjct: 169 NELNTKGCIAIENSLLSS-YDKALKGEKAFLITYEDKFFPSTKEELSMVLSSLFQWKEAW 227 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 T + + Y N +F + + F++ + F + K F I Sbjct: 228 TRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|317154207|ref|YP_004122255.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio aespoeensis Aspo-2] gi|316944458|gb|ADU63509.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio aespoeensis Aspo-2] Length = 419 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 12/126 (9%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 + P ++ + K L + +R + ++ + C G K GD + PEG Y+ Sbjct: 30 AYGPPRLVAVDKTAQTLIMLER--QSPLREIRRFP-CTTGQADGDKRVEGDLRTPEGVYF 86 Query: 107 IG---WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNN 157 +G L ++ + +PN D+ +TG + IHG + GC A+ Sbjct: 87 VGHRIKRKLEWGLYGDIAYALNYPNPVDRIKGKTGGGIWIHGRGKEFVPRDTQGCVALKV 146 Query: 158 KQMQEI 163 M+++ Sbjct: 147 PDMRDV 152 >gi|296273934|ref|YP_003656565.1| ErfK/YbiS/YcfS/YnhG family protein [Arcobacter nitrofigilis DSM 7299] gi|296098108|gb|ADG94058.1| ErfK/YbiS/YcfS/YnhG family protein [Arcobacter nitrofigilis DSM 7299] Length = 320 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 90/270 (33%), Gaps = 38/270 (14%) Query: 1 MTNRYNILLFALFIFLNG-------------CHHSRSLIDKAEHPLSENLIISMQKKRTS 47 M ++L +L K+E S+ L + Sbjct: 1 MKKIAFLVLVLFNTYLLADFVTIYRTMGIDEVQKELDKQLKSEKYWSKYLENIDVRYGYY 60 Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 V+ K E++KR +L + I G K GD + P G Y + Sbjct: 61 ESKKYVLVADKLSKKFELFKREDKKFLKILTQTMIS--GEKDGDKFLEGDLKTPIGAYKL 118 Query: 108 GWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC-------ASAGCYAMNNKQ 159 + Y L++ +PN FDK+ N+ G + IHG + GC A++N+ Sbjct: 119 TRKLTKLDQFYGPLALVTNYPNTFDKSLNKEGHGIWIHGMPYEESRSDYTKGCIALDNES 178 Query: 160 M----------QEIYAIVRDSLRGNMQSHI-QIQAFPFRMTSK----NMQLYQNNPNYSF 204 + + + I + + + ++ AF F T + Y + + F Sbjct: 179 LVALDKSINYDESVLLISEKDIEPTTKKEMSEVLAFIFSWTDAWRVSDTNTYLSYYSKDF 238 Query: 205 WNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 D F+K+ + F + +K F Sbjct: 239 KRANGQNFDAFKKHKEYIFSRKEDKTIKFS 268 >gi|217033182|ref|ZP_03438635.1| hypothetical protein HPB128_184g5 [Helicobacter pylori B128] gi|216945091|gb|EEC23798.1| hypothetical protein HPB128_184g5 [Helicobacter pylori B128] Length = 321 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 28/227 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 42 AEELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 99 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 100 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 159 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHI-------------QIQAFPFRM 188 + GC A+ N + Y V + + + + Sbjct: 160 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKFFPSTKEELSMILSSLFQWKEAW 218 Query: 189 TSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 T + + Y + +F + + F++ + F + K F Sbjct: 219 TRGDFERYMRFYSPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 265 >gi|332673691|gb|AEE70508.1| conserved hypothetical secreted protein [Helicobacter pylori 83] Length = 330 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|302879533|ref|YP_003848097.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans ES-2] gi|302582322|gb|ADL56333.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans ES-2] Length = 387 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 16/148 (10%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG-PK 92 + L + + + + + + L ++ NV E + ++ + G G K Sbjct: 109 PQTLHAPQYLWQLNAQQKFALVVDTSRSTLYVY-ENVKGEPRYVTDFYVTI--GKLGTEK 165 Query: 93 IETGDEQAPEGFYYIG---WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA- 148 + TGD++ P G Y+I N + + + +PNE+DK +NRTG+ + +HG + Sbjct: 166 VSTGDQRTPLGVYFIQANLPKNQLADMYGSGAFPLSYPNEWDKRNNRTGSGIWLHGTSSD 225 Query: 149 --------SAGCYAMNNKQMQEIYAIVR 168 S GC +NN + ++ ++ Sbjct: 226 TYSRPPRASNGCVVLNNDDLNKLAPYLQ 253 >gi|308184325|ref|YP_003928458.1| conserved hypothetical secreted protein [Helicobacter pylori SJM180] gi|308060245|gb|ADO02141.1| conserved hypothetical secreted protein [Helicobacter pylori SJM180] Length = 330 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|208434440|ref|YP_002266106.1| conserved hypothetical secreted protein [Helicobacter pylori G27] gi|208432369|gb|ACI27240.1| conserved hypothetical secreted protein [Helicobacter pylori G27] Length = 330 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|296134919|ref|YP_003642161.1| ErfK/YbiS/YcfS/YnhG family protein [Thiomonas intermedia K12] gi|295795041|gb|ADG29831.1| ErfK/YbiS/YcfS/YnhG family protein [Thiomonas intermedia K12] Length = 447 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 14/149 (9%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 I+ +P I + + L ++++ + L Y G K Sbjct: 186 PPTGAIAANLVALAPDVQRAIVVDTARSRLYLFEQ-RNGVPQLEASYYFSQGKFGAG-KT 243 Query: 94 ETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFPNEFDKAHNRTGADLMIHGEC--- 147 + GD + P G Y+I + ++ + +PNE+DK TG + +HG Sbjct: 244 QIGDMKTPLGIYFITRKIGAKDLKPLYGAGALTLNYPNEWDKQQGHTGFGVWLHGTPPGS 303 Query: 148 ------ASAGCYAMNNKQMQEIYAIVRDS 170 AS GC ++N + + A Sbjct: 304 YARVPLASDGCVVLSNPDVLSLMANTPAG 332 >gi|147667752|gb|ABQ45842.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|57242223|ref|ZP_00370162.1| conserved hypothetical secreted protein [Campylobacter upsaliensis RM3195] gi|57016903|gb|EAL53685.1| conserved hypothetical secreted protein [Campylobacter upsaliensis RM3195] Length = 316 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 80/219 (36%), Gaps = 30/219 (13%) Query: 43 KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102 +++ KN+ IL+++ ++ ++ +G G K + GD + P Sbjct: 48 SLGYYTQDVMIVKTNKNDKILKVFSYTNGKIKKEFEQKEV--ITGLMGDKEKEGDLKTPV 105 Query: 103 GFYYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRTGADLMIHGEC---------ASAG 151 GFY +G NP +Y+ + +PN DK ++TG + IHG + G Sbjct: 106 GFYELGMK-FNPGDQYYGPFAFATSYPNLLDKVQDKTGGGIWIHGYPLDGTRLDEFKTRG 164 Query: 152 CYAMNNKQMQE---------IYAIVRDSLRGNMQSH------IQIQAFPFRMTSKNMQLY 196 C A+ N ++++ +Y + + + + A+ + T ++ Y Sbjct: 165 CIALFNDKLEDFAKIVAGKKVYVLTEEKDNVRAKKEEIASLMADLFAWKYAWTVSDVNAY 224 Query: 197 QNNP-NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 F K F + F + +K F Sbjct: 225 LAFYDEKDFKRFDKSSFSQFASMKKIIFARKEHKIIKFS 263 >gi|147667738|gb|ABQ45835.1| conserved hypothetical secreted protein [Helicobacter pylori] gi|317177644|dbj|BAJ55433.1| conserved hypothetical secreted protein [Helicobacter pylori F16] Length = 330 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNITFSSVSVI 278 >gi|147667748|gb|ABQ45840.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNVFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|253827436|ref|ZP_04870321.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] gi|253510842|gb|EES89501.1| conserved hypothetical protein [Helicobacter canadensis MIT 98-5491] Length = 331 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 68/201 (33%), Gaps = 26/201 (12%) Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 L+++ L + G G K + GD P G Y + +N + Y Sbjct: 77 ESPKLKLYALENGKWVERLNANSLVGSKG--GNKQKEGDLATPIGVYTLEKRLVNLDQYY 134 Query: 119 -FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV-- 167 L+ +PN +D+ RTG + IHG + GC A+ N + + I+ Sbjct: 135 GPLAFTTSYPNLYDRLQKRTGYGIWIHGMPLNGNREELNTRGCIAIENNLLTTVDQIIDY 194 Query: 168 RDSLRGNMQSHI------QIQA-------FPFRMTSKNMQLYQNNPNYSFWNMLKLGHDY 214 RDSL + I ++ + + + + F ++ Sbjct: 195 RDSLLITFSNEIKEVKKQDLEIILSNLFQWKEAWKNNVIDTCLSFYGEDFIRYDGQKYNA 254 Query: 215 FEKNHQEPFIQIINKQYVFFK 235 F ++ F + K F K Sbjct: 255 FAAVKRQIFGKGEEKNIQFNK 275 >gi|317179115|dbj|BAJ56903.1| conserved hypothetical secreted protein [Helicobacter pylori F30] Length = 330 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQM---QEIYAIVRDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + +I + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSSYDKILK-GEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|315586801|gb|ADU41182.1| conserved hypothetical secreted protein [Helicobacter pylori 35A] Length = 330 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWVRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|307637196|gb|ADN79646.1| putative periplasmic protein [Helicobacter pylori 908] gi|325995785|gb|ADZ51190.1| putative periplasmic protein [Helicobacter pylori 2018] gi|325997381|gb|ADZ49589.1| putative periplasmic protein [Helicobacter pylori 2017] Length = 330 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 69/227 (30%), Gaps = 28/227 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQ---------IQAFPFRMTSK- 191 + GC A+ N + Y V + + I + F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAW 227 Query: 192 ---NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N F + + F++ + F + K F Sbjct: 228 ARGDFERYMRFYNPDFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|255322067|ref|ZP_05363215.1| 60 kDa chaperonin [Campylobacter showae RM3277] gi|255300880|gb|EET80149.1| 60 kDa chaperonin [Campylobacter showae RM3277] Length = 311 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 16/172 (9%) Query: 1 MTNRYNILLFALFI--FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 M +L+F F L + + + A++ L + L + + +I + K Sbjct: 1 MKKLLGLLIFYAFFSQILLAEALADANLTGAKYWL-KKLGAADVRYGYYEAKTKIIVVNK 59 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 + L+ ++ L + + +G G K + GD + P G Y + + Y Sbjct: 60 AQKTLQSFEYAGG---ALKEIFSQSVITGKSGDKFKEGDLKTPVGVYDVTDKFTPSDPFY 116 Query: 119 -FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQM 160 L++++ +PN DKA +TG + IHG + GC A NN + Sbjct: 117 GPLAMSLSYPNAHDKAAQKTGGGIWIHGLPMKGKRDDEVKTRGCVAFNNDAL 168 >gi|147667740|gb|ABQ45836.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 TEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|210134719|ref|YP_002301158.1| hypothetical protein HPP12_0524 [Helicobacter pylori P12] gi|210132687|gb|ACJ07678.1| hypothetical protein HPP12_0524 [Helicobacter pylori P12] Length = 330 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 70/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|301166595|emb|CBW26171.1| putative periplasmic protein [Bacteriovorax marinus SJ] Length = 346 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 33/182 (18%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 N L F LF AE L L++ + F V+ K+ + L + Sbjct: 4 NYLSFILFFLSVNASF-------AETYLPAQLLMLDEN-----FSHHVVLAEKSTHTLYL 51 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS--------- 116 +K N + L+ +Y + G K+ GD + PEG Y + + Sbjct: 52 FK-NENGNPQLVNKYPMATGK-KAGDKLFQGDHRTPEGIYSFTDFLTHQDLLNRHGKQGQ 109 Query: 117 -KYFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAI 166 + + +PN DK + +TG + +H S GC N + E+ Sbjct: 110 IYGVGAFVMNYPNPIDKRNGKTGGGIWLHSTNDETRIDKGLDSRGCVVATNSNLIELSKF 169 Query: 167 VR 168 + Sbjct: 170 IE 171 >gi|147667734|gb|ABQ45833.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 71/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ N + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIN-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWIRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|147667726|gb|ABQ45829.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 70/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|217034386|ref|ZP_03439801.1| hypothetical protein HP9810_889g31 [Helicobacter pylori 98-10] gi|216943181|gb|EEC22651.1| hypothetical protein HP9810_889g31 [Helicobacter pylori 98-10] Length = 321 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 42 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 99 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 100 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 159 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 160 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 214 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 215 KEAWVRGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 265 >gi|294338856|emb|CAZ87190.1| conserved hypothetical protein; putative exported protein [Thiomonas sp. 3As] Length = 434 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 14/144 (9%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 I+ +P I + + L ++++ + L Y G K Sbjct: 173 PPTGAIAANLVALAPDVQRAIVVDTARSRLYLFEQ-RNGVPQLEASYYFSQGKFGAG-KT 230 Query: 94 ETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFPNEFDKAHNRTGADLMIHGEC--- 147 + GD + P G Y+I + ++ + +PNE+DK TG + +HG Sbjct: 231 QIGDMKTPLGIYFITRKIGAKDLKPLYGAGALTLNYPNEWDKQQGHTGFGVWLHGTPPGS 290 Query: 148 ------ASAGCYAMNNKQMQEIYA 165 AS GC ++N + + A Sbjct: 291 YARVPLASDGCVVLSNPDVLSLMA 314 >gi|308272917|emb|CBX29521.1| hypothetical protein N47_J05020 [uncultured Desulfobacterium sp.] Length = 233 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 23/132 (17%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I + K+E L ++K V + Y + K +GD PEG Y I Sbjct: 85 AIIVNKSERTLVLYKNG-----VPVWTYNVGLGRNGSLDKQRSGDNSTPEGKYRIT--QK 137 Query: 113 NPNSKYFLSINIGFPNEFDK-------------AHNRTGADLMIHGECA---SAGCYAMN 156 S+Y ++ + +PNE D+ A G + IHG + GC AM+ Sbjct: 138 KSESRYHKALLLNYPNEEDRKNFILAKKNGLIPAKAGIGGLIEIHGGGRNSMTYGCIAMD 197 Query: 157 NKQMQEIYAIVR 168 N ++ I+ IV Sbjct: 198 NSKIDHIFKIVP 209 >gi|297379710|gb|ADI34597.1| Hypothetical protein HPV225_0513 [Helicobacter pylori v225d] Length = 330 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 72/234 (30%), Gaps = 36/234 (15%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 E L + K++ LE ++ + + + K S G K Sbjct: 52 EELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTL 109 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC------ 147 GD P G Y I + Y L++ +PN +D RTG + +HG Sbjct: 110 EGDLATPIGVYRITQKLERLDQYYGVLALVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRN 169 Query: 148 --ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRMT 189 + GC A+ N + Y V + + FP F+ Sbjct: 170 ELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQWK 224 Query: 190 SK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 225 EAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|15611534|ref|NP_223185.1| hypothetical protein jhp0467 [Helicobacter pylori J99] gi|4154995|gb|AAD06036.1| putative [Helicobacter pylori J99] Length = 330 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 70/227 (30%), Gaps = 28/227 (12%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQ---------IQAFPFRMTSK- 191 + GC A+ N + Y V + + I + F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAW 227 Query: 192 ---NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 228 ARGDFERYMRFYNPNFTRYDGMSFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|308061845|gb|ADO03733.1| conserved hypothetical secreted protein [Helicobacter pylori Cuz20] Length = 330 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 71/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKALKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|147667742|gb|ABQ45837.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 42/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLDRLDQYYGVLAFVTNYPNLYDTLKKRTGYGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|254779460|ref|YP_003057565.1| hypothetical protein HELPY_0829 [Helicobacter pylori B38] gi|254001371|emb|CAX29356.1| Conserved hypothetical protein; putative signal peptide [Helicobacter pylori B38] Length = 330 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 70/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|317180294|dbj|BAJ58080.1| conserved hypothetical secreted protein [Helicobacter pylori F32] Length = 330 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 69/231 (29%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQM---QEIYAIVRDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + +I + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSSYDKILK-GEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPDFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|317012334|gb|ADU82942.1| hypothetical protein HPLT_02565 [Helicobacter pylori Lithuania75] Length = 330 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 36/230 (15%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 E L + K++ LE ++ + + + K S G K Sbjct: 52 EELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKTL 109 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC------ 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 110 EGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRN 169 Query: 148 --ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRMT 189 + GC A+ N + Y V + + FP F+ Sbjct: 170 ELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQWK 224 Query: 190 SK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 225 EAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKHIAFSS 274 >gi|108562917|ref|YP_627233.1| hypothetical protein HPAG1_0492 [Helicobacter pylori HPAG1] gi|107836690|gb|ABF84559.1| conserved hypothetical secreted protein [Helicobacter pylori HPAG1] Length = 330 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 70/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEGKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|223038983|ref|ZP_03609275.1| 60 kDa chaperonin [Campylobacter rectus RM3267] gi|222879956|gb|EEF15045.1| 60 kDa chaperonin [Campylobacter rectus RM3267] Length = 313 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 66/174 (37%), Gaps = 18/174 (10%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPF----HPTVIRI 56 M + LF +F L+ + + A ++ + + +I + Sbjct: 1 MVLKKIFDLF-IFSVLSSQILAAQNLTDANLTSAKYWRSKLTDANVTYGYYEKKTKIIVV 59 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 K + L ++ L + + +G G K + GD + P G Y I P+ Sbjct: 60 NKAQKTLHGFEYAGG---ALEQTFSQNVITGKSGDKFKEGDLKTPVGVYDIIDKFTPPDP 116 Query: 117 KY-FLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQM 160 Y L++++ +PN DKA +TG + IHG + GC A +N + Sbjct: 117 FYGPLAMSLSYPNAHDKAAKKTGGGIWIHGLPMNGKREDEVRTRGCVAFDNDAL 170 >gi|188527645|ref|YP_001910332.1| conserved hypothetical secreted protein [Helicobacter pylori Shi470] gi|188143885|gb|ACD48302.1| conserved hypothetical secreted protein [Helicobacter pylori Shi470] gi|308063686|gb|ADO05573.1| conserved hypothetical secreted protein [Helicobacter pylori Sat464] Length = 330 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 69/234 (29%), Gaps = 36/234 (15%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 E L + K++ LE ++ + K S G K Sbjct: 52 EELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEI-ESNMLKKINSSKALVGS-KKGDKTL 109 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC------ 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 110 EGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRN 169 Query: 148 --ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRMT 189 + GC A+ N + Y V + + FP F+ Sbjct: 170 ELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQWK 224 Query: 190 SK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKGQTI 239 + + Y N +F + + F++ + F + K F I Sbjct: 225 EAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSSISVI 278 >gi|323700390|ref|ZP_08112302.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. ND132] gi|323460322|gb|EGB16187.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans ND132] Length = 419 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 21/162 (12%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 F L + + + PL + S +I + K L + ++ Sbjct: 3 VAFFVLTLVLSATTAVAGGWAPLLSS---------HSYGPKRIIAVDKEAQELIVLEQ-- 51 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSKYFLSINIGFP 127 + ++ + C + G K GD + P G Y++G L+ + ++ ++ +P Sbjct: 52 QSPLHEVRRFP-CTTGQSMGDKAVEGDMRTPVGVYFVGHRINRTLDWDLYGNIAYSLNYP 110 Query: 128 NEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQEI 163 N D+ +TG+ + +HG + GC A+ M+++ Sbjct: 111 NPIDRIKGKTGSGIWLHGRGKTFLPRDTLGCVALKVPDMKDV 152 >gi|319790530|ref|YP_004152163.1| ErfK/YbiS/YcfS/YnhG family protein [Thermovibrio ammonificans HB-1] gi|317115032|gb|ADU97522.1| ErfK/YbiS/YcfS/YnhG family protein [Thermovibrio ammonificans HB-1] Length = 355 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 11/124 (8%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I + K +L + + + +++++ C G K+E GD++ PEG Y+ + Sbjct: 93 AIVVDKTNEVLYVIRMENGVPF-IVRKFP-CITGKRPGDKLEEGDQRTPEGIYFPMYWET 150 Query: 113 NPNSKYF-LSINIGFPNEFDK-AHNRTGADLMIHGEC-------ASAGCYAMNNKQMQEI 163 N Y + + +PN D+ R G + IHG ++ GC + N+ ++E+ Sbjct: 151 NLPPIYGIGAFPLNYPNLLDRKILKRNGHGIWIHGTNNPNRPPHSTNGCIVLKNEYLREL 210 Query: 164 YAIV 167 ++ Sbjct: 211 KKLI 214 >gi|308182672|ref|YP_003926799.1| hypothetical protein HPPC_02545 [Helicobacter pylori PeCan4] gi|308064857|gb|ADO06749.1| hypothetical protein HPPC_02545 [Helicobacter pylori PeCan4] Length = 330 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 69/231 (29%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 E L + K++ LE ++ + + K S G K Sbjct: 51 VEELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENP-ILSSYDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|147667728|gb|ABQ45830.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 70/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|319957804|ref|YP_004169067.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM 16511] gi|319420208|gb|ADV47318.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM 16511] Length = 188 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 35/191 (18%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M+ L AL ++L GC I + + I + E Sbjct: 1 MSKIVIGLTAALALWLGGCGAPTGKPGGRYSAKDCKPIPFRPDRAADK-----VVIKQRE 55 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTF--GPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 + + ++ ++K ++ T GPK++ GD P G Y I + Sbjct: 56 HKVYVYHNG-----KVIKVFRSSLGKNTMSRGPKVQQGDFCTPVGHYRIVDKRCHALK-- 108 Query: 119 FLSINIGFPNEFDKAHNR-----TGADLMIHGEC----------------ASAGCYAMNN 157 + ++ I +PN D A + G + HG+ + GC A+ N Sbjct: 109 YRAMTISYPNTEDLARAKKLGVKPGDYITFHGQPYWNRDGHGDEYTLKHDWTNGCIALTN 168 Query: 158 KQMQEIYAIVR 168 K + +++ V+ Sbjct: 169 KDLDWLWSAVK 179 >gi|15645145|ref|NP_207315.1| hypothetical protein HP0518 [Helicobacter pylori 26695] gi|2313633|gb|AAD07586.1| conserved hypothetical secreted protein [Helicobacter pylori 26695] Length = 330 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 70/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEI-ENNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|261839650|gb|ACX99415.1| hypothetical protein HPKB_0823 [Helicobacter pylori 52] Length = 330 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVANKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQM---QEIYAIVRDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + +I + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSSYDKILK-GEKAFLITYEDKF----FPSTKEELSMILSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFERYMRFYNPNFTRYDGMQFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|308270997|emb|CBX27607.1| hypothetical protein N47_H24290 [uncultured Desulfobacterium sp.] Length = 166 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 22/111 (19%) Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-- 136 Y G K + GD + PEG Y I + +S+++ S+++ +PN D ++ Sbjct: 52 SYNAALGR-KSGRKAQKGDNRTPEGLYIIV--QHDADSRFYKSLHLSYPNRSDIIRSQKS 108 Query: 137 ---TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYAIVRDS 170 G L IHG + GC A++N++M EI+ +V + Sbjct: 109 GYPPGNALAIHGLPEGFEDLGTFQSKRNWTKGCIAVSNEEMDEIWELVENG 159 >gi|147667750|gb|ABQ45841.1| conserved hypothetical secreted protein [Helicobacter pylori] Length = 330 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 71/231 (30%), Gaps = 36/231 (15%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 +E L + K++ LE ++ + + + K S G K Sbjct: 51 AEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEID-NNMLKKINSSKALVGS-KKGDKT 108 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 GD P G Y I + Y L+ +PN +D RTG + +HG Sbjct: 109 LEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDR 168 Query: 148 ---ASAGCYAMNNKQMQEIYAIV---RDSLRGNMQSHIQIQAFP-------------FRM 188 + GC A+ N + Y V + + FP F+ Sbjct: 169 NELNTKGCIAIENPLLSS-YDKVLKGEKAFLITYEDKF----FPSTKEELSMVLSSLFQW 223 Query: 189 TSK----NMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 + + Y N +F + + F++ + F + K F Sbjct: 224 KEAWARGDFEGYMRFYNPNFTRYDGMKFNAFKEYKKRVFAKNEKKNIAFSS 274 >gi|85859285|ref|YP_461487.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB] gi|85722376|gb|ABC77319.1| tetratricopeptide repeat family protein [Syntrophus aciditrophicus SB] Length = 498 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 11/124 (8%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 S + I K L ++ + + C+ G K+ +GD + PEG + Sbjct: 59 VSLTSGFAVIIDKKAQKLYVYGTRNGQFRKVFET--RCSTGKNQGDKLTSGDARTPEGIF 116 Query: 106 YIGWNNLNPNS---KYFLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMN 156 + + L+ + +PN DK + G ++ IHG S GC ++ Sbjct: 117 FPTRKFTDDELTPIYGTLAFTLDYPNYLDKRTGKNGHNIWIHGTDKTLKSFQSNGCIVLD 176 Query: 157 NKQM 160 N + Sbjct: 177 NSDI 180 >gi|218886565|ref|YP_002435886.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757519|gb|ACL08418.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 432 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 12/118 (10%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN- 111 ++ + K + L I++R + L Y +C G K GD + PEG Y++ Sbjct: 47 LVAVDKEDQKLHIYER--HSPLKLAASY-VCTTGQATGDKQTAGDLKTPEGIYFVVNKLS 103 Query: 112 --LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQMQ 161 L+ ++ + +PN DK +TG+ + IH + + GC A+N + Sbjct: 104 AGLDMEMYGGIAYTLNYPNPVDKLRRKTGSGIWIHSKGHDIVPRETKGCIALNRADID 161 >gi|301166890|emb|CBW26468.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 190 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 63/197 (31%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI---CAWSGTF---G 90 ++ + + T I + K++ +++W N + K Y I A++ Sbjct: 9 TLLILSFSGFAKDKITQIVVLKDKREMQLWSGN-----EIYKVYNIKLSIAYNNPLFRAH 63 Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR--------TGADLM 142 K GD Q P GFY I N + S+ I +PN DK + + G ++ Sbjct: 64 EKRREGDNQTPVGFYKISKKRQRTN--FPKSLLINYPNWKDKHNAKIRGIPEDEIGGMIL 121 Query: 143 IHGEC----------------------------------ASAGCYAMNNKQMQEIYAIVR 168 IHG + GC A+ +++M EI+ +V Sbjct: 122 IHGNPYRVNKTVRDYAAKLGIEADTVERWARDYFYPFFDWTNGCVAVTDEEMDEIFELVD 181 Query: 169 DSLRGNMQSHIQIQAFP 185 I +P Sbjct: 182 --------KDTPINIYP 190 >gi|291613141|ref|YP_003523298.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus ES-1] gi|291583253|gb|ADE10911.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus ES-1] Length = 388 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 14/128 (10%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + SP + + +++ L ++ NV+ E + ++ I K+ GD++ P G Sbjct: 121 QLSPQQRYAVVVDTSKSTLYLF-ENVNGEPRYVSDFYISVGKKGA-DKVSEGDQKTPLGV 178 Query: 105 YYIGW---NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGC 152 Y++ + + + + +PNE+DK G + +HG AS GC Sbjct: 179 YFVNGHLGKDKITDFYGPSAYPLSYPNEWDKREGHDGHGIWLHGTPPDTFSRPPRASNGC 238 Query: 153 YAMNNKQM 160 + N + Sbjct: 239 VVLANNDL 246 >gi|313673241|ref|YP_004051352.1| erfk/ybis/ycfs/ynhg family protein [Calditerrivibrio nitroreducens DSM 19672] gi|312939997|gb|ADR19189.1| ErfK/YbiS/YcfS/YnhG family protein [Calditerrivibrio nitroreducens DSM 19672] Length = 471 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 24/166 (14%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 R L + + N + S+ + + + + K IR Sbjct: 6 RIFFSLLIILLCHNAVYASKKIFADVMAKGVDKEKVFLVDKGMKKSFLVEIR-------- 57 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFL 120 D VL+KE+ G K+ GD++ P G YY+ Sbjct: 58 -------DDLPVLIKEFDDVIVGEGNGDKLREGDKKTPTGVYYVIGFIPQSKLDKIYGTG 110 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQM 160 + + +PN DK + +TG + IHG S GC + N+ + Sbjct: 111 AFPLNYPNFVDKLYGKTGHGIWIHGRDPLEKKQVSKGCVVLKNEDI 156 >gi|220903383|ref|YP_002478695.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867682|gb|ACL48017.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 822 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 12/120 (10%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN- 111 ++ + KN +++ L Y C G K D + PEG Y++ + Sbjct: 54 LVAVDKNRQTFMFFEKKS--PLKLRYTYP-CTTGQLTGDKKVLNDLRTPEGVYFVEYKIA 110 Query: 112 --LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAMNNKQMQEI 163 L+ ++ + +PN DK +TG + IH + ++ GC A+ K++ E+ Sbjct: 111 SGLDFKEYGGIAYTLNYPNPVDKLRGKTGHGIWIHSKGLGIEPLSTRGCVAIGLKEIDEV 170 >gi|239909259|ref|YP_002956001.1| hypothetical protein DMR_46240 [Desulfovibrio magneticus RS-1] gi|239799126|dbj|BAH78115.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 759 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 12/120 (10%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 T F + + K + R V + E+ CA G K + GD + PEG Sbjct: 31 DTEWFPKLSVAVDKKSQAFFLLSRQS---PVRVAEFLPCATGQLLGDKFKEGDLRTPEGV 87 Query: 105 YYIGWNN---LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASA------GCYAM 155 Y+I LN L+ + FPN D +TG + IHG S GC A+ Sbjct: 88 YFIVRRKASGLNYELYGDLAFPLNFPNPADVVRKKTGHGIWIHGRGNSIVPYVTQGCVAL 147 >gi|114776723|ref|ZP_01451766.1| ErfK/YbiS/YcfS/YnhG [Mariprofundus ferrooxydans PV-1] gi|114552809|gb|EAU55240.1| ErfK/YbiS/YcfS/YnhG [Mariprofundus ferrooxydans PV-1] Length = 426 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 24/160 (15%) Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVI-----------RIFKNENILEIWKRNV 70 + + +++ L M + P I K + + +++ Sbjct: 116 ASADLNRGLGEADARLKAFMDRLDPISGEPVDILQPGPDVASIFMFDKARSRMFVYQPGE 175 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFP 127 D + + + S G K GD + P G Y ++ I +P Sbjct: 176 DGRLKKITDEYVVTGSVK-GDKEHRGDGRTPNGIYRFIKKLQGKQLQAIYGPIAFPIDYP 234 Query: 128 NEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNK 158 NE D+ H++ G+ + +HG + GC++++NK Sbjct: 235 NELDRLHHKDGSGIWLHGYPMDVSRRPPQDTRGCFSLSNK 274 >gi|160897527|ref|YP_001563109.1| ErfK/YbiS/YcfS/YnhG [Delftia acidovorans SPH-1] gi|160363111|gb|ABX34724.1| ErfK/YbiS/YcfS/YnhG [Delftia acidovorans SPH-1] Length = 499 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 16/140 (11%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG-PK 92 + + I I +++ L ++ L+ ++ + G G K Sbjct: 223 PPAGSVPGEFLMLGASVRHAIAIDASKSRLYLFAHEAGG-LRLVGDFYVSV--GKLGTDK 279 Query: 93 IETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFPNEFDKAHNRTGADLMIHGEC-- 147 + GD++ P G Y++G + P ++ + FPN++DKA R+G+ + +HG Sbjct: 280 WQEGDQRTPLGIYFVGRHIPGPRLPEFYGKGALTVNFPNDWDKAVGRSGSGIWLHGSPPD 339 Query: 148 -------ASAGCYAMNNKQM 160 AS GC + N + Sbjct: 340 QFSRAPEASDGCLVLANPDL 359 >gi|34557654|ref|NP_907469.1| hypothetical protein WS1291 [Wolinella succinogenes DSM 1740] gi|34483371|emb|CAE10369.1| conserved hypothetical protein [Wolinella succinogenes] Length = 322 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 26/216 (12%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 + + K + L +++ L G K GD + P Sbjct: 56 ARFGYYESVKYLFIADKALSELSLYQLGGKKPERLAHTK--ALMGSKKGDKRIEGDLKTP 113 Query: 102 EGFYYIGWNNLNPN-SKYFLSINIGFPNEFDKAHNRTGADLMIHGEC-------ASAGCY 153 G Y + + L+ +PN +D ++G+ + IHG + GC Sbjct: 114 IGVYDLTAKLTRLDQLYGPLAFVTSYPNLYDSLQKKSGSGIWIHGLPLNGDREINTKGCI 173 Query: 154 AMNNKQMQEIYAIV--RDSLRGNM---------QSHIQIQAFPFRMTSK----NMQLYQN 198 A++N+ ++ I + ++SL + + + + FR + +++ Y Sbjct: 174 AIDNQLLKTIDGSINHKESLLITGDGNLFEVKNEELVILLSDLFRWRNAWKFNDLESYLG 233 Query: 199 NPNY-SFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 + F + + F + F + NK VF Sbjct: 234 YYDKEDFLRFDGMKFEAFRDYKRRVFNKGENKTIVF 269 >gi|268316179|ref|YP_003289898.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252] gi|262333713|gb|ACY47510.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252] Length = 388 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 23/148 (15%) Query: 39 ISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98 ++ + + +I + K +++ + L + I G K GD Sbjct: 220 VAEARAEARRQNQWLIVVDKMARQCLVYRGDRQ-----LAVFPIELGPNWMGSKHYAGDR 274 Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH-------------NRTGADLMIHG 145 PEG Y + ++Y+ ++ + +PN D+A + G + IHG Sbjct: 275 ATPEGRYRVVRKLGPGETRYYRALLLDYPNAEDRARFARARREGLLPPGAKIGGLIEIHG 334 Query: 146 E-----CASAGCYAMNNKQMQEIYAIVR 168 E + GC A++N+ M+ +Y ++ Sbjct: 335 EGGRGADWTEGCVALHNQDMRRLYEMIP 362 >gi|152990313|ref|YP_001356035.1| hypothetical protein NIS_0564 [Nitratiruptor sp. SB155-2] gi|151422174|dbj|BAF69678.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 353 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 16/162 (9%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 G S + + ++ P +VI + KNE L++ + Sbjct: 54 GDKTSAAFLLSLLQTDPHTDDKQLENLLVHPNSFSVIVVSKNEQKLKLIYGKNG----FI 109 Query: 78 KEYKI-CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIGFPNEFD-K 132 + +I C G K+E GD++ P G Y+ W + + +PN D K Sbjct: 110 QTIEIPCITGKRQGDKLEAGDKKTPNGVYFPKWFIPQEKLSKIYGVGAFPLNYPNIIDKK 169 Query: 133 AHNRTGADLMIHGEC-------ASAGCYAMNNKQMQEIYAIV 167 +++TG + +H +S GC + N+ +I V Sbjct: 170 IYHKTGDGIWLHATNDDKRKPFSSNGCVVVTNENFTKIKPFV 211 >gi|302343292|ref|YP_003807821.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfarculus baarsii DSM 2075] gi|301639905|gb|ADK85227.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfarculus baarsii DSM 2075] Length = 495 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 64/156 (41%), Gaps = 11/156 (7%) Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81 S + + +E + + P +I + K+ ++K + L E+ Sbjct: 32 SSPCAAQTQPAAAEQPTSFIYCYQGRVDDPAIIVVDKSLQRAMVFKYL--GDMALQWEFP 89 Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN--SKYFLSINIGFPNEFDKAHNRTGA 139 C G K ++GD++ PEG Y+I + ++++ +PN D R G Sbjct: 90 -CGTGEKEGDKAQSGDQKTPEGVYFITHRYEDRKVTVFGDRALHLDYPNAIDCVDGRQGD 148 Query: 140 DLMIHGEC------ASAGCYAMNNKQMQEIYAIVRD 169 + +HG +S GC ++N+ + + ++RD Sbjct: 149 GIYLHGTNRDLRPRSSNGCITLDNRDLARLSQMIRD 184 >gi|158522215|ref|YP_001530085.1| hypothetical protein Dole_2204 [Desulfococcus oleovorans Hxd3] gi|158511041|gb|ABW68008.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3] Length = 466 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 19/175 (10%) Query: 4 RYNIL-LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + + A + L S + P + VI + K Sbjct: 18 RFFCVNMPAAAMALAVLGISGTGAQAFSIP-------DLVVYSEEDRPQYVILVEKATQQ 70 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS---KYF 119 L ++ ++ K++K C+ GPK+ GD++ PEG Y+ + Sbjct: 71 LFLFSFYKNS-IRKEKQWK-CSTGENHGPKLVMGDKKTPEGIYFFTRKYTDSELAPIYGT 128 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQEIYAIVR 168 L+ + +PN D + G+ + +HG S GC A+ N + + + Sbjct: 129 LAFPLDYPNVLDHEAEKNGSAIWLHGTNKVLKDNDSNGCVALENGSIDALAPYIE 183 >gi|317484503|ref|ZP_07943412.1| ykud domain-containing protein [Bilophila wadsworthia 3_1_6] gi|316924221|gb|EFV45398.1| ykud domain-containing protein [Bilophila wadsworthia 3_1_6] Length = 308 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 69/203 (33%), Gaps = 25/203 (12%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 V+ + K+ + ++ +Y +C G K GD + PEG Y++ Sbjct: 67 LPDQAVVAVDKSRQRFFLMEKGKARDY-------LCTTGQAQGDKQVRGDLKTPEGVYFV 119 Query: 108 GWNN---LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNK 158 L+ + + +PN D+ +TG+ + +H S GC +N K Sbjct: 120 VRKRTERLDFEEYGGEAYILDYPNPVDRLRGKTGSGIWVHSRGRAITPFESRGCVVLNLK 179 Query: 159 QMQEIYA-IVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYF-- 215 + E+ + R + + ++ P R + + + W D F Sbjct: 180 DIAEVGPELKRGTPVLIGER---VEIAP-RKDAVREVEERTRGWRAAWRR-GEAGDGFIA 234 Query: 216 -EKNHQEPFIQIINKQYVFFKGQ 237 E+ ++ K+ G Sbjct: 235 PERAASIRKVERQEKRVRVTFGP 257 >gi|268315962|ref|YP_003289681.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252] gi|262333496|gb|ACY47293.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252] Length = 241 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 47/158 (29%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG------DEQAPEG 103 +R+ K + L +++ L++ + + + F K G D + PEG Sbjct: 81 SNVWLRVSKRQRRLFVYRGT-----RLVRSFPVDLGTNPFSDKTRRGSVASPDDWRTPEG 135 Query: 104 FYYIGWNNLNPNSKYFLSINIGFPNEFDKAHN---------------------------- 135 +Y+ N S+Y+ ++ + +P D Sbjct: 136 VFYVAAK--NARSQYYRALVLNYPTADDALRGLREGLISEAEYRAIVEAEANFRMPPMNT 193 Query: 136 RTGADLMIHGEC------ASAGCYAMNNKQMQEIYAIV 167 G + IHG+ + GC A+ N+ + I+ +V Sbjct: 194 ALGGWIEIHGDGTGQQVTWTQGCVALRNEDLDAIWPLV 231 >gi|303326005|ref|ZP_07356448.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. 3_1_syn3] gi|302863921|gb|EFL86852.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. 3_1_syn3] Length = 385 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 21/166 (12%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + AL + L + + D ++ + ++ + KN Sbjct: 1 MSRLLAGLALSLVLAVVTVAPARADNW--------QANLYNEGLPSH---LVAVDKNRRA 49 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSKYF 119 +++ L + C G K E D + PEG Y++ + L+ Sbjct: 50 FLFFEKKS--PLKLKYSFP-CVTGQLAGDKQELNDLRTPEGIYFVEYKIASGLDFKEYGG 106 Query: 120 LSINIGFPNEFDKAHNRTGADLMIH----GECASAGCYAMNNKQMQ 161 ++ + +PN D+ +TG + IH G + GC A+ K++ Sbjct: 107 IAYTLNYPNPVDRLRGKTGHGIWIHSKGFGLVPTRGCVAIGLKEID 152 >gi|78777576|ref|YP_393891.1| hypothetical protein Suden_1379 [Sulfurimonas denitrificans DSM 1251] gi|78498116|gb|ABB44656.1| conserved hypothetical protein [Sulfurimonas denitrificans DSM 1251] Length = 321 Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 33/195 (16%) Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS----KYFLSINI 124 + + + K+Y G KI+ GD + P G Y I + Sbjct: 80 DENQNFKFKKKYSAFTGKMK-GDKIKEGDLRTPTGIYQITQKLSKETKLDPFYGPFAFVT 138 Query: 125 GFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQ------EIYA------- 165 +PN +D + G+ + IHG A + GC A+NN ++ +I Sbjct: 139 SYPNVYDTYKGKNGSGIWIHGLPAEDRDEFTRGCIAINNSSIECLNKNIDISKTLLIIND 198 Query: 166 ------IVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNH 219 + ++SL + Q+ A+ +++ Y + + +F + + F Sbjct: 199 SEVKQNVAKESLVSILA---QLYAWRHAWLYDDIKNYLSFYSPNFVRFDGMDIEKFRSYK 255 Query: 220 QEPFIQIINKQYVFF 234 F + K +F Sbjct: 256 TRVFQKNEKKTIIFN 270 >gi|317050283|ref|YP_004111399.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5] gi|316945367|gb|ADU64843.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5] Length = 474 Score = 99.2 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 14/124 (11%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I KN+ + I + + +L+ Y G K GDE+ P G Y+ Sbjct: 207 DGQIFIWTSKNQQVTYI-IQRQGEGFTVLEAYHSSTGRIP-GEKQRRGDEKTPTGIYFPV 264 Query: 109 WNNLN---PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMN 156 P + + +PN DK RTG+ + +HG S GC + Sbjct: 265 SKMTTNQMPQRYGAYAFPVNYPNHLDKHLGRTGSGIWLHGINENDNGQIPYNSEGCVVFS 324 Query: 157 NKQM 160 N+ + Sbjct: 325 NEGI 328 >gi|291279367|ref|YP_003496202.1| hypothetical protein DEFDS_0974 [Deferribacter desulfuricans SSM1] gi|290754069|dbj|BAI80446.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 413 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 27/169 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +L+ +F G S + + +S++ + + K++ Sbjct: 1 MRKVIFLLII--LVFYAGLSFSAIIENIFSKGISDDTV---------------FVVDKSQ 43 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG---WNNLNPNSK 117 L + + D ++ + I G K GD++ PEG Y + N Sbjct: 44 KKLFVVQVKNDMPEIIWQYNNILLGEME-GDKQVEGDKKTPEGIYRVVSFIPKNQLSEIY 102 Query: 118 YFLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQM 160 + + +PN DK +TG + IHG + GC A++N + Sbjct: 103 GEGAYPLNYPNPVDKIFGKTGYGIWIHGLKEDSGKKYTQGCVALHNGDL 151 >gi|15605752|ref|NP_213129.1| hypothetical protein aq_183 [Aquifex aeolicus VF5] gi|2982913|gb|AAC06531.1| putative protein [Aquifex aeolicus VF5] Length = 397 Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 69/197 (35%), Gaps = 38/197 (19%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P + V + K L ++K L Y + G K GD + PEG YY Sbjct: 134 PENHYVFLVEKMSQYLFVFKGK-----KLEGMYPVTTGMN-IGDKEREGDGKTPEGVYYF 187 Query: 108 GWNNLNPNS---KYFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYA- 154 +++ + +PN +DK +TG+ + +HG ++ GC Sbjct: 188 TRFIPPEQLSEIYGGIAVALNYPNPYDKLLGKTGSGIWLHGSNEKDRDKLPFSTRGCVVA 247 Query: 155 --------------MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNP 200 ++N + IY ++ SL I ++ K++ + + Sbjct: 248 QTDVLKTEIVPKINLSNTLIG-IYKVIPQSLEVENVKEF-ILSWKNAWEKKDLNRFISFY 305 Query: 201 NYSF-WN--MLKLGHDY 214 + F W LK DY Sbjct: 306 SKHFRWKGGGLKEWKDY 322 >gi|149194098|ref|ZP_01871196.1| hypothetical protein CMTB2_03398 [Caminibacter mediatlanticus TB-2] gi|149136051|gb|EDM24529.1| hypothetical protein CMTB2_03398 [Caminibacter mediatlanticus TB-2] Length = 319 Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 66/187 (35%), Gaps = 26/187 (13%) Query: 3 NRYNILLFALFIFLNGCHHSRSLI--DKAEHPLSENLIISMQ---------KKRTSPFHP 51 R I+ + K + +NL K +P Sbjct: 1 MRIFIIFLFSTFLFADVIDTYRYYGIQKTIKEIEKNLQSEKYWLKKLKNIDVKYGYFENP 60 Query: 52 TVIRI-FKNENILE--IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 T I K L+ ++K+ + L + G G K + GD + P G Y + Sbjct: 61 TFILFCNKITRTLQVNLYKK---GKLKNLTTFN-NVIVGKLGDKQKEGDLKTPIGNYTLI 116 Query: 109 WNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC-------ASAGCYAMNNKQM 160 N+ Y L+ +PN FDK + + G + IHG+ S GC +NN ++ Sbjct: 117 NKIKPSNTFYGPLAFVTSYPNLFDKLNKKNGYGIWIHGKPLDGERGDLSKGCIVLNNDEI 176 Query: 161 QEIYAIV 167 + + ++ Sbjct: 177 KHLDTLI 183 >gi|213418318|ref|ZP_03351384.1| hypothetical protein Salmonentericaenterica_10609 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 76 Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 35/56 (62%) Query: 181 IQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFFKG 236 + +PFRMT NMQ ++ + FW LK G+DYFE+ H+ P + I++ +YV K Sbjct: 1 MSIYPFRMTDANMQRHKYSYYKDFWAQLKPGYDYFEQTHKPPTVSIVDGRYVVSKP 56 >gi|255527509|ref|ZP_05394378.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7] gi|255508814|gb|EET85185.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7] Length = 220 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 52/211 (24%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV----------- 53 L+F +F+ + S K + S + + ++ + + Sbjct: 10 LVFLIFGIFLIVLVSGISIKKYIKTKEADSAKQVSVQKSTDSTKENEKLFFNKKDAVAEK 69 Query: 54 --IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I+++K +LE++ + L+ +KI G K + GD + PEG YYI + Sbjct: 70 ASIKVYKKRRVLELYSSD-----KLVGRFKIGLGRSPEGYKEKEGDNKTPEGSYYICYR- 123 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADL------------------------------ 141 N N+KY I I +PN D + Sbjct: 124 -NGNTKYTYFIGISYPNIEDAKRGLQQGLINEAVYKRIERAINNKKQPPWNTPLGGEIGL 182 Query: 142 --MIHGECASAGCYAMNNKQMQEIYAIVRDS 170 + S GC A+ ++ + + + Sbjct: 183 HGGGNKYDWSYGCIALTDEDINILKQYAPNG 213 >gi|291288878|ref|YP_003505694.1| ErfK/YbiS/YcfS/YnhG family protein [Denitrovibrio acetiphilus DSM 12809] gi|290886038|gb|ADD69738.1| ErfK/YbiS/YcfS/YnhG family protein [Denitrovibrio acetiphilus DSM 12809] Length = 418 Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 18/122 (14%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + + KN L + K + +L +++ G K GDE+ PEG Y++ Sbjct: 36 AVLVEKNGKWLHVLKV-AEGRVEVLDSFQVLTGRVD-GDKRVQGDEKTPEGVYFVTGFLS 93 Query: 113 NPNS----------KYFLSINIGFPNEFDKAHNRTGADLMIHG------ECASAGCYAMN 156 + + +PN D+ +TG + +HG + GC A + Sbjct: 94 PEKLRAMYGEVGKQYGTGAYPLSYPNLKDRLQGKTGGGIWLHGIDPSRNVPVTKGCVAFD 153 Query: 157 NK 158 N+ Sbjct: 154 NE 155 >gi|291276929|ref|YP_003516701.1| hypothetical protein HMU07090 [Helicobacter mustelae 12198] gi|290964123|emb|CBG39967.1| putative periplasmic protein [Helicobacter mustelae 12198] Length = 331 Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 11/127 (8%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + K+ L ++K L + I G G K + GD+ P G Sbjct: 63 GYYEGANFLFLFNKDNASLILYKIENGHLTQLQQTNAIMGIGG--GAKQKKGDKVTPIGV 120 Query: 105 YYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAM 155 Y + Y ++ +PN +D NRTG+ + +HG + GC A+ Sbjct: 121 YNFVELLEKLDPYYGPMAFATNYPNTYDNLLNRTGSGIWLHGLPLNGDRKDQNTKGCIAV 180 Query: 156 NNKQMQE 162 N +QE Sbjct: 181 ENNLIQE 187 >gi|225850906|ref|YP_002731140.1| hypothetical protein PERMA_1371 [Persephonella marina EX-H1] gi|225645444|gb|ACO03630.1| conserved hypothetical protein [Persephonella marina EX-H1] Length = 361 Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 63/164 (38%), Gaps = 11/164 (6%) Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73 I L ++ K +SE ++ P I + K+ L++ K D Sbjct: 59 IILLLQEGRKAEAQKLFSKISEKNKGVLENVIYIPEGSYAIVVSKSRQRLKVIKFVNDLP 118 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDK 132 +L+ I G K++ GD++ P G Y+ Y + + +PN D+ Sbjct: 119 VEVLELRSI--TGKRPGDKLKEGDQRTPNGVYFPVKYLTKLAPMYGVGAFPLNYPNILDR 176 Query: 133 A-HNRTGADLMIHGEC-------ASAGCYAMNNKQMQEIYAIVR 168 N+TG + IH +S GC +NN+ ++ ++ Sbjct: 177 KFLNKTGNGIWIHASDKPDRPYFSSNGCVVLNNEDFNKLKRFIK 220 >gi|292492146|ref|YP_003527585.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4] gi|291580741|gb|ADE15198.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4] Length = 212 Score = 95.7 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 50/174 (28%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 L+ +L P I + K++ +L + K ++K+Y + G G K Sbjct: 11 LALSLASPFVLATPPTEFPYEIIVIKSKRLLVVKKGT-----RVIKKYHVALGQGGIGGK 65 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL----MIH---- 144 GD++ PEG Y I + P+ K++ I++ +P D + +IH Sbjct: 66 RVEGDKRTPEGEYEIVGSW--PSRKFYYFIHLNYPGRQDAMAGYKKGLISWEELIHIYRA 123 Query: 145 -----GEC------------------------------ASAGCYAMNNKQMQEI 163 G + GC A+ N ++ E+ Sbjct: 124 HQEQNGTPPQQTRLGGFIGIHGIGEETNQKLAIHQDFDWTRGCIALTNTEIDEL 177 >gi|332703549|ref|ZP_08423637.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio africanus str. Walvis Bay] gi|332553698|gb|EGJ50742.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio africanus str. Walvis Bay] Length = 457 Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 13/117 (11%) Query: 49 FHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P + I K + +R + CA G K GD + PEG Y+I Sbjct: 69 NSPVRFLAIDKASQTFFLMERRSPLRKAVEL---PCATGQVAGDKYREGDLRTPEGVYFI 125 Query: 108 GWNN---LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC------ASAGCYAM 155 L+ ++ + FPN D+ +TG + IHG + GC A+ Sbjct: 126 QRKLTTGLDYQLYGDIAYTLNFPNPVDRIEGKTGYGIWIHGRGGKIVPMETRGCVAL 182 >gi|315453295|ref|YP_004073565.1| hypothetical protein HFELIS_08910 [Helicobacter felis ATCC 49179] gi|315132347|emb|CBY82975.1| putative periplasmic protein [Helicobacter felis ATCC 49179] Length = 335 Score = 95.4 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 85/278 (30%), Gaps = 47/278 (16%) Query: 1 MTNRYNILLFALFIFLNGC---HHSRSLIDKAEHPLSENLIISMQKK------------- 44 + R ++ F + L ++ K + L + +K Sbjct: 6 LWARVLLVAFLCVVGLRADTLMGFVKAYHKKGIASIERLLQSYLTQKEFWEDVLEKHDIS 65 Query: 45 -RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103 + I K + L ++ + + + G KI GD+ P G Sbjct: 66 YGYYEDLDYLFVINKADPKLILYALQGEKIVKVNES--TALVGSKAGEKITEGDKATPIG 123 Query: 104 FYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYA 154 Y I ++ Y ++ +PN FD A R G + IHG + GC A Sbjct: 124 VYQILKKLTGLDAYYGPFALETNYPNPFDVARKRNGHGIWIHGLPLDGKRDELNTKGCIA 183 Query: 155 MNNKQMQE----------IYAIVRDSLRGNMQSHI-----QIQAFPFRMTSKNMQLYQNN 199 + N +++ + + + Q + + + ++ Y N Sbjct: 184 IQNPILKDYGTRLKDKKTLLIVYEGEFKYATQDELAALLSSLYTWRSAWAKNDLVSYMNF 243 Query: 200 PNYSFWNMLKLGHDY--FEKNHQEPFIQIINKQYVFFK 235 F G DY +EK F + +K F K Sbjct: 244 YAPDF--KHANGMDYKTYEKFKTHVFGKNEDKTIRFSK 279 >gi|322378789|ref|ZP_08053218.1| conserved hypothetical secreted protein [Helicobacter suis HS1] gi|322380638|ref|ZP_08054790.1| conserved hypothetical secreted protein [Helicobacter suis HS5] gi|321146960|gb|EFX41708.1| conserved hypothetical secreted protein [Helicobacter suis HS5] gi|321148819|gb|EFX43290.1| conserved hypothetical secreted protein [Helicobacter suis HS1] Length = 309 Score = 94.6 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 26/184 (14%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + I K + L ++K + + + + G K+ GD+ P G Sbjct: 41 GYYESLDYLFIINKADPKLILYKMDGEKISKVNESK--ALVGSKIGMKVSEGDKATPIGV 98 Query: 105 YYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAM 155 Y I N ++ Y L++ +PN D TG + IHG + GC A+ Sbjct: 99 YQIIKKITNLSAYYGPLALVTNYPNPLDVVLKHTGHGIWIHGMPLKGDRDNSYTKGCIAI 158 Query: 156 NNKQMQEIYAIVRD--SLRGNMQSHIQ-------------IQAFPFRMTSKNMQLYQNNP 200 +NK +Q +VR+ +L + + A+ N+ Y Sbjct: 159 DNKILQNYDKLVRNKKALLVVYEGDFPHASKQELALLLSNLYAWRMAWAKNNLISYLEFY 218 Query: 201 NYSF 204 + +F Sbjct: 219 SPNF 222 >gi|163782557|ref|ZP_02177554.1| hypothetical protein HG1285_16775 [Hydrogenivirga sp. 128-5-R1-1] gi|159882130|gb|EDP75637.1| hypothetical protein HG1285_16775 [Hydrogenivirga sp. 128-5-R1-1] Length = 395 Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 33/199 (16%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P V + K L I++ VL Y + K GD++ PEG YY Sbjct: 131 PDDKYVFLVEKMSQYLLIYRGK-----VLENLYPVTTGQDWE-DKWVEGDKRTPEGIYYF 184 Query: 108 G---WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAM 155 P +++ + +PN D+ + G+ + +HG ++ GC Sbjct: 185 TEFIPPRRLPKMYGGIAVVLNYPNPVDRLLGKGGSGIWLHGSDEENRNNIPFSTRGCVVA 244 Query: 156 NNKQMQEIY-AIVRDSLRGNMQSHIQIQA-----------FPFRMTSKNMQLYQNNPNYS 203 +N ++ I I +++ + I + + K+++ Y + + + Sbjct: 245 DNNDLRSIVKKIAKNNTLIAIYKEIPTEIEVDDVRDFLRRWEDSWEGKDLEGYLSFYSKN 304 Query: 204 F-WNMLKLGHDYFEKNHQE 221 F W + G++ + + + Sbjct: 305 FRWK--RGGYNSWARYKRR 321 >gi|297171153|gb|ADI22163.1| uncharacterized protein conserved in bacteria [uncultured gamma proteobacterium HF0200_24F15] Length = 372 Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 14/123 (11%) Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG---WNNLNPNS 116 L +++ + + L + F K GD++ P G Y I Sbjct: 139 SARLIVYENDR-GKIKELGNFYASIGISGF-EKRREGDQKTPIGVYRITGFIPGRKLHER 196 Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGEC---------ASAGCYAMNNKQMQEIYAIV 167 ++ I +PN+ D+ + RTG+ + +HG AS GC ++ N+ + ++ Sbjct: 197 YGPGALPIDYPNDLDQIYERTGSGIWLHGTEPGSVNRAPRASDGCLSLANRDFLSLLRLI 256 Query: 168 RDS 170 DS Sbjct: 257 GDS 259 >gi|258517068|ref|YP_003193290.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans DSM 771] gi|257780773|gb|ACV64667.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans DSM 771] Length = 270 Score = 90.7 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 44/180 (24%) Query: 27 DKAEHPLSENLIISMQKKRT-SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW 85 +++L + ++ P+ I I K + L I +N LK Y + Sbjct: 86 SSTGQSKAKSLKAILAERGITDPWSTLKIVINKTNHSLSIVYKNTW-----LKTYPVDIG 140 Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS---INIGFPNEFDKAHN------- 135 SG K GD + PEG +YI ++ + Y+L + + +PN D Sbjct: 141 SGGLADKQVQGDLKTPEGTFYIAEKSVLSPADYYLGTRWMRLSYPNAEDAGRGVRQGLIN 200 Query: 136 -RTGADL-------MIH--------------------GECASAGCYAMNNKQMQEIYAIV 167 +TG + I G+ + GC ++N +++ Y V Sbjct: 201 SQTGDSIVNAINAGKIPPQRTALGGGVGIHGGDIPSFGKDWTWGCIGLSNGDVEDFYDYV 260 >gi|153953429|ref|YP_001394194.1| hypothetical protein CKL_0793 [Clostridium kluyveri DSM 555] gi|219854053|ref|YP_002471175.1| hypothetical protein CKR_0710 [Clostridium kluyveri NBRC 12016] gi|146346310|gb|EDK32846.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219567777|dbj|BAH05761.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 220 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 41/179 (22%) Query: 30 EHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89 E + + KK T I+I+K + I+E++ + L+ +K+ Sbjct: 48 EKVIENDEEELFFKKPEKFPDTTFIKIYKEKRIMELY-----GDNKLIGRFKMALGRVPQ 102 Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL-------- 141 G K GD + PEG YYI + +N +KY + I +PN D + Sbjct: 103 GKKQREGDNKTPEGNYYICY--INSKTKYKYFLGISYPNIQDAKWALDEGVIDNNTFQKI 160 Query: 142 ------------------------MIHGECASAGCYAMNNKQMQEI--YAIVRDSLRGN 174 + GC A+++ M + Y VR S+ Sbjct: 161 EKAIENKKQPPWNTPLGGAIGIHGGGTDYDWTYGCIAISDNDMDILKQYVFVRTSVEIY 219 >gi|300856075|ref|YP_003781059.1| hypothetical protein CLJU_c29090 [Clostridium ljungdahlii DSM 13528] gi|300436190|gb|ADK15957.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528] Length = 220 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 69/211 (32%), Gaps = 57/211 (27%) Query: 1 MTNRYN-----ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV-- 53 M ++ L+F + I S + + + ++ +K + Sbjct: 1 MKKKHVIFPLVFLIFGIAIIATISGLSIKRYIRENEFKNISAKNNVTEKDVQAEKGKLFF 60 Query: 54 -----------IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102 I+I+K + +E++ + L+ +K+ G K + GD + PE Sbjct: 61 EAPKQKPEKTSIKIYKGKRAMELY-----GDNELIGRFKVGLGRVPSGKKEKEGDLKTPE 115 Query: 103 GFYYIGWNNLNPNSKYFLSINIGFPNEFD-------KAHNRTGAD--------------- 140 G YYI + +NP SKY I +PN D K + D Sbjct: 116 GTYYICY--INPKSKYDYFFGISYPNIDDAKEALDKKVIGKINYDRIEWAINNKEQPPWH 173 Query: 141 ----------LMIHGECASAGCYAMNNKQMQ 161 + GC A++NK M Sbjct: 174 TSLGGEIGIHGGGSKYDWTYGCIALSNKDMD 204 >gi|213028217|ref|ZP_03342664.1| hypothetical protein Salmonelentericaenterica_40310 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 99 Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%) Query: 12 LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVD 71 L + L C L+ + +S + K+ P I+IFK E L+++ + + Sbjct: 2 LAMLLMPCVSFAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVK-MG 56 Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 +Y LL YKIC +SG GPK GD ++PEGFY + N L P Sbjct: 57 EQYQLLDSYKICNYSGGLGPKRRQGDFKSPEGFYSVQRNQLKP 99 >gi|160938553|ref|ZP_02085907.1| hypothetical protein CLOBOL_03450 [Clostridium bolteae ATCC BAA-613] gi|158438540|gb|EDP16298.1| hypothetical protein CLOBOL_03450 [Clostridium bolteae ATCC BAA-613] Length = 192 Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 59/197 (29%), Gaps = 47/197 (23%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R L + L +L + P + I + K Sbjct: 1 MKFRKCAAAGVLALCLAAAGPLSALAGQNAGP---------GAAYQPSVNGVNIYVSKMG 51 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWS-GTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 N L + + + + + G K++ GDE P G +Y+ N S + Sbjct: 52 NTLTLKQYAQT-----IGTWPVKLGRRSETGDKVQEGDEITPSGSFYVCTR--NDQSICY 104 Query: 120 LSINIGFPNEFDKAHNRT----------------------------GADLMIHGE--CAS 149 L++ + +PN D G + IHG+ + Sbjct: 105 LALGLSYPNAEDAERGLRDGLINEEQYNAIVEANKAGIQPPWNTPLGGAIEIHGDQGGGT 164 Query: 150 AGCYAMNNKQMQEIYAI 166 +GC A+ N M ++ Sbjct: 165 SGCIAVTNDVMDILWEY 181 >gi|331003021|ref|ZP_08326533.1| hypothetical protein HMPREF0491_01395 [Lachnospiraceae oral taxon 107 str. F0167] gi|330413065|gb|EGG92440.1| hypothetical protein HMPREF0491_01395 [Lachnospiraceae oral taxon 107 str. F0167] Length = 206 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 70/227 (30%), Gaps = 63/227 (27%) Query: 1 MTNR---YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV---- 53 M R L+F++ I L S S+ +S + P P V Sbjct: 1 MKARKSIVAFLVFSMLIGLM----SFSVYAATVTKVSTGSVNFES--GFGPGQPKVVEPS 54 Query: 54 --IRIFKNENILEIWKRNVDAEYVLLKEYKICAW-SGTFGPKIETGDEQAPEGFYYIGWN 110 I + K L + N ++ ++ G K GD P G YYI Sbjct: 55 TRIYVSKMAKELTLIADN-----KVVGKWPCSLGEFSANGTKQRQGDRTTPNGDYYICVR 109 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT----------------------------GADLM 142 N S Y LS+ + +P++ G +M Sbjct: 110 --NDKSAYHLSLGLSYPDKAAADRGFEQGIITQEEKDSIYTAIDSKLCPPWNTALGGAIM 167 Query: 143 IHGECA----SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 IHG +AGC A+NN M ++ Q I++ P Sbjct: 168 IHGNYQKGVPTAGCVAVNNDVMDILWPY--------GQLGIKVSVGP 206 >gi|315650366|ref|ZP_07903438.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] gi|315487477|gb|EFU77787.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986] Length = 201 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 75/224 (33%), Gaps = 62/224 (27%) Query: 1 MTNRYNIL---LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 M R + + + ++ I L + + + K S +S+Q+ S T I + Sbjct: 1 MKIRKSFVAAPVLSMLIGLMSFNAYAATVRKVTT--SSYTPVSLQQ---SVEPSTRIYVS 55 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAW-SGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 K L + N ++ ++ G K + GD P G YYI N S Sbjct: 56 KMSKELTLIADN-----KVVGKWPCSLGEFSANGTKKKQGDRTTPNGDYYICVR--NDKS 108 Query: 117 KYFLSINIGFP-------------------------------NEFDKAHNRTGADLMIHG 145 Y LS+ + +P +D A G +MIHG Sbjct: 109 AYHLSLGLSYPDKAAADRGFESGIISKEEKDTIYSAIDRKVCPPWDTAL---GGAIMIHG 165 Query: 146 ECA----SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 +AGC A+++ M ++ Q I++ P Sbjct: 166 NYQKGIPTAGCVAVSDDVMDILWPY--------GQLGIKVSVGP 201 >gi|239627720|ref|ZP_04670751.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517866|gb|EEQ57732.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 199 Score = 87.3 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 38/146 (26%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF-GPKIETGDEQAPEGFYYIGWN 110 I + K + + + + N + + + G K++ GD P G +Y+ Sbjct: 50 ISIYVSKKGSTVTLSRYNST-----IGSWPAQIGRESATGDKVQQGDGITPSGKFYVCTK 104 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRT----------------------------GADLM 142 N S+Y+LS+ + +PN D G +M Sbjct: 105 --NDQSQYYLSLGLSYPNIDDAERGLADGLINEEQYKAIVDANKAGEQPPWDTPLGGAIM 162 Query: 143 IHGE--CASAGCYAMNNKQMQEIYAI 166 IHGE +AGC A+ N M ++ Sbjct: 163 IHGEQGGGTAGCIAVTNDVMDILWEY 188 >gi|86159334|ref|YP_466119.1| hypothetical protein Adeh_2912 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775845|gb|ABC82682.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 175 Score = 86.5 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 56/171 (32%), Gaps = 34/171 (19%) Query: 16 LNGCHHS--RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73 L C + +L AE L + P + + + E+W + Sbjct: 14 LAACALAMLPALAPGAEGALDPSPC---------PRSRDAVVVVTDRR--ELWLCSGG-- 60 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133 ++ + G K GD + P G Y + + P+ +Y I I +P A Sbjct: 61 -APAAQFTVALGRSGVG-KRRRGDGRTPLGTYPL--GDPRPSPQYGTFIPIAYPTPAQAA 116 Query: 134 HNRTGADLMIHGEC--------------ASAGCYAM-NNKQMQEIYAIVRD 169 TGA + IHG + GC A + + I A VR Sbjct: 117 RGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCIATGTDGDVDAIAAFVRA 167 >gi|116747988|ref|YP_844675.1| hypothetical protein Sfum_0541 [Syntrophobacter fumaroxidans MPOB] gi|116697052|gb|ABK16240.1| hypothetical protein Sfum_0541 [Syntrophobacter fumaroxidans MPOB] Length = 191 Score = 85.7 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 39/146 (26%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I ++K + L + + N VL+++Y I G K GD + PEG ++I + Sbjct: 43 IFVYKEKRRLYVIQSN-----VLVRDYPIGLGPHPSGDKDRDGDGRTPEGDFFIIVKGSS 97 Query: 114 PNSKYFLSINIGFPNE-----------------FDKAHN---RT--------GADLMIHG 145 K S+ I +P D R+ G + IH Sbjct: 98 ERLK--KSLAISYPGRGHAEKAYFSGVITPLEFRDILRAADNRSAPPSGTVLGGKIFIHA 155 Query: 146 E----CASAGCYAMNNKQMQEIYAIV 167 + G A+ + M+E++ + Sbjct: 156 GGAHKDWTDGSIALYDSDMEELFTVA 181 >gi|218516367|ref|ZP_03513207.1| hypothetical protein Retl8_23254 [Rhizobium etli 8C-3] Length = 122 Score = 85.7 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNN 111 +IR++K+E + + K + + Y+I SG GPK GDE+ PEG Y I W Sbjct: 35 LIRVYKSERRMVLLKGD-----APIAAYEISLGSGANAGPKQREGDEKTPEGRYEIDWR- 88 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGA 139 N S LS++I +P ++ Sbjct: 89 -NAKSTAHLSLHISYPKPEEQRAAEVNG 115 >gi|86360290|ref|YP_472178.1| hypothetical protein RHE_PE00012 [Rhizobium etli CFN 42] gi|86284392|gb|ABC93451.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 196 Score = 85.3 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 24/141 (17%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +L A + + P + + +IR++K+E + Sbjct: 1 MLAIAAVSLFAYTKVMARIGSGSPPPAAPMEQRA-----------DLIRVYKSERRMVFL 49 Query: 67 KRNVDAEYVLLKEYKICAWSG-TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 K + + Y+I S GPK GDE+ PEG Y I W NP S LS++I Sbjct: 50 KGD-----APIAAYEISLGSAADAGPKQREGDEKTPEGPYEIDWR--NPKSTAHLSLHIS 102 Query: 126 FPNEFDKAHNR-----TGADL 141 +P ++ G ++ Sbjct: 103 YPKPEEQRAAEVNGFPPGGNI 123 >gi|194332931|ref|YP_002014791.1| hypothetical protein Paes_0084 [Prosthecochloris aestuarii DSM 271] gi|194310749|gb|ACF45144.1| hypothetical protein Paes_0084 [Prosthecochloris aestuarii DSM 271] Length = 122 Score = 85.3 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 11/125 (8%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R + + L C R+ KA + S+Q +++ + K++ Sbjct: 1 MWMRVFYTIAVVATLL--CLAQRAHRSKAVAA-ENSKSSSLQTLSLPVEADSLV-VSKDD 56 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 +L ++ ++K Y I G K GD + PEG Y I NP S+Y L Sbjct: 57 RLLHLYSDG-----AVVKSYTIALGFSPRGAKRYLGDGRTPEGRYTIIGR--NPQSRYHL 109 Query: 121 SINIG 125 S++I Sbjct: 110 SLSIS 114 >gi|256419960|ref|YP_003120613.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588] gi|256034868|gb|ACU58412.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588] Length = 190 Score = 84.6 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 35/147 (23%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 + + K++ + ++ + L K YK+ + K + GD PEG ++I Sbjct: 42 DKIFLLVDKSDYRMYLY-----EDVTLRKIYKVVFGNKDQSDKRQEGDRLTPEGTFHILS 96 Query: 110 NNLNPNSKYFLSINIGFPNE--FDKAH-----------NRTGADLMIHGE---------- 146 + + + + + +PNE +++ H G + IHG Sbjct: 97 KRM--DKLWNRFMLLDYPNEASWNRFHELQSAGVLPAGATPGGGIGIHGVEWNSGIRDNY 154 Query: 147 -----CASAGCYAMNNKQMQEIYAIVR 168 + GC +M N + E+Y I++ Sbjct: 155 VEGRINWTLGCVSMKNSDVSELYDIIK 181 >gi|303239380|ref|ZP_07325908.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2] gi|302593166|gb|EFL62886.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2] Length = 266 Score = 84.6 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 43/162 (26%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-GWNNL 112 I + K++++L + LLK Y + G K +GD + PEG +YI + L Sbjct: 110 IYVDKSDHVLSLISNG-----KLLKSYHVELGDSDLGDKEISGDHKTPEGTFYISEKSIL 164 Query: 113 NPNSKYFLS--INIGFPNEFDKAHNRTGADLMIH-------------------------- 144 +P +Y S + + +PN D + Sbjct: 165 DPADEYLGSRWMRLSYPNIEDAERGLEDGIISSSIYEEIVTAFKNFQTTPQNTSLGGGVG 224 Query: 145 ---------GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G + GC ++N +++ Y V+ + +Q Sbjct: 225 IHGGSTAELGSDWTWGCVGLSNSSVEDFYDYVKVGTKVVIQK 266 >gi|86159927|ref|YP_466712.1| hypothetical protein Adeh_3509 [Anaeromyxobacter dehalogenans 2CP-C] gi|85776438|gb|ABC83275.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 171 Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 42/177 (23%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 +LL FL C A P P +I + E+ L + Sbjct: 13 LLLVPPLAFLLAC---------AHRPAPPGC----------PPVDALILVDTAEHRLALC 53 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF 126 + A + + S K GD + P G Y +G P++ + I IG+ Sbjct: 54 EAGAAAA-----VFPVALGSAGT-EKRAEGDRRTPLGAYALGT--PRPSAGFGTFIPIGY 105 Query: 127 PNEFDKAHNRTGADLMIHG--------------ECASAGCYAM-NNKQMQEIYAIVR 168 P + RTG+++ IHG +AGC A+ ++ ++ + A V Sbjct: 106 PTAEQRRAGRTGSNVGIHGPARAMRWAGRLNTWADWTAGCVALGSDPEVAAVAAFVE 162 >gi|220918755|ref|YP_002494059.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956609|gb|ACL66993.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 171 Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 23/131 (17%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I + E+ L + + A + + S K GD + P G Y +G Sbjct: 40 LILVDTAEHRLALCEAGAAAA-----VFPVALGSAGT-EKRAEGDRRTPLGAYALGT--P 91 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAM-NN 157 P++ + I IG+P + RTG+++ IHG +AGC A+ ++ Sbjct: 92 RPSAGFGTFIPIGYPTAEQRRAGRTGSNVGIHGPARAMRWAGRLNTWADWTAGCVALGSD 151 Query: 158 KQMQEIYAIVR 168 +++ + A V Sbjct: 152 REVAAVAAFVE 162 >gi|302385209|ref|YP_003821031.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium saccharolyticum WM1] gi|302195837|gb|ADL03408.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium saccharolyticum WM1] Length = 203 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 60/177 (33%), Gaps = 41/177 (23%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 S + P+S ++ ++ + I + K L + + VL+ EY + Sbjct: 24 SSNVTGYAEPIS-GPGAAIAAGNSASVNNVTIYVSKRTKTLSLKQNG-----VLIAEYPV 77 Query: 83 CAW-SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT---- 137 S + G K GD + P G +Y+ N S +L++ + +P D Sbjct: 78 SLGASSSEGNKKVEGDMRTPSGEFYVCTR--NDKSVAYLALGLSYPAIKDAERGYADGII 135 Query: 138 ------------------------GADLMIHG----ECASAGCYAMNNKQMQEIYAI 166 G + IHG E + GC A++N M ++ Sbjct: 136 TQAQKDEIVKANLEGKQPPWDTPLGGAIEIHGCRVPEGTTHGCVAVDNSAMDVLWNY 192 >gi|197123398|ref|YP_002135349.1| hypothetical protein AnaeK_2998 [Anaeromyxobacter sp. K] gi|196173247|gb|ACG74220.1| conserved hypothetical protein [Anaeromyxobacter sp. K] Length = 175 Score = 83.4 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 23/137 (16%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P + + + L + + ++ + G K GD + P G Y + Sbjct: 39 PRSRDAVVVVTDRRELWLCRGGT-----PAAQFAVALGRSGVG-KRRHGDGRTPLGTYPL 92 Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCY 153 + P+++Y I I +P A TGA + IHG + GC Sbjct: 93 --GDPRPSTQYGTFIPIAYPTPAQAARGFTGAAVGIHGPPRGTEGAGYPVTEVDWTQGCI 150 Query: 154 AM-NNKQMQEIYAIVRD 169 A ++ + I A VR Sbjct: 151 ATGTDEDVDAIAAFVRA 167 >gi|294506432|ref|YP_003570490.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8] gi|294342760|emb|CBH23538.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8] Length = 304 Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 37/154 (24%) Query: 50 HPTVIRIFKNENILEIWKRNV-DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 IR+ K + + +++ + Y A G K + PEG +Y+ Sbjct: 145 SNVWIRVSKRKRRVYVYRGAELAHAFEADMAYNAFADKKRNGGKTRPDHWRTPEGTFYVV 204 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHN----------------------------RTGAD 140 NP S+++ ++ + +P D G Sbjct: 205 HK--NPQSEFYKALVLNYPKVEDARRGLDAGLISRAQYEAIRQAQQEHRMPPMSTDLGGW 262 Query: 141 LMIHGEC------ASAGCYAMNNKQMQEIYAIVR 168 + IHG+ + GC A+ N M I+ VR Sbjct: 263 IEIHGDGTGDATAWTQGCVAIRNGAMDVIWEQVR 296 >gi|83816729|ref|YP_444677.1| hypothetical protein SRU_0534 [Salinibacter ruber DSM 13855] gi|83758123|gb|ABC46236.1| hypothetical protein SRU_0534 [Salinibacter ruber DSM 13855] Length = 304 Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 37/154 (24%) Query: 50 HPTVIRIFKNENILEIWKRNV-DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 IR+ K + + +++ + Y A G K + PEG +Y+ Sbjct: 145 SNVWIRVSKRKRRVYVYRGAELAHAFEADMAYNAFADKKRNGGKTRPDHWRTPEGTFYVV 204 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHN----------------------------RTGAD 140 NP S+++ ++ + +P D G Sbjct: 205 HK--NPQSEFYKALVLNYPKVEDARRGLDAGLISRAQYEAIRQAQQEHRMPPMGTDLGGW 262 Query: 141 LMIHGEC------ASAGCYAMNNKQMQEIYAIVR 168 + IHG+ + GC A+ N M I+ VR Sbjct: 263 IEIHGDGTGDATAWTQGCVAIRNGAMDVIWEQVR 296 >gi|262199265|ref|YP_003270474.1| ErfK/YbiS/YcfS/YnhG family protein [Haliangium ochraceum DSM 14365] gi|262082612|gb|ACY18581.1| ErfK/YbiS/YcfS/YnhG family protein [Haliangium ochraceum DSM 14365] Length = 217 Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 41/170 (24%) Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW- 85 AE + +++ + K L +++ + +I Sbjct: 40 RSAERDCPAQVGDLATSADPRLRAASLLVVEKGARRLGLYR---GGRLAMCT--RIALGV 94 Query: 86 SGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN-----------EFDKAH 134 G G K GD + P+G+Y ++ P SK+ +I + +PN D+A Sbjct: 95 GGPEGDKEREGDRRTPQGWY---RSSDKPWSKFEGAIAVHYPNADDARAAQRAGRIDEAT 151 Query: 135 NRT-----------------GADLMIHGE----CASAGCYAMNNKQMQEI 163 + G +++IHG +AGC A+++ + + Sbjct: 152 AKRIVRALRRGQKPPQNTALGGEILIHGGGSRWDWTAGCIALSDTDLAAL 201 >gi|220918201|ref|YP_002493505.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219956055|gb|ACL66439.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 175 Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 21/135 (15%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P + + + L + + + ++ + G K GD + P G Y + Sbjct: 41 PRARDAVVVVTDRRELWLCRGGI-----PAAQFAVALGRSGVG-KRRHGDGRTPLGTYPL 94 Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC------------ASAGCYAM 155 + P+++Y I I +P A TGA + IHG + GC A Sbjct: 95 --GDPRPSTQYGTFIPIAYPTPAQAARGFTGAAVGIHGPPRGTEGYPVTEVDWTQGCIAT 152 Query: 156 -NNKQMQEIYAIVRD 169 ++ + I A VR Sbjct: 153 GTDEDVDAIAAFVRA 167 >gi|229496449|ref|ZP_04390165.1| ErfK/YbiS/YcfS/YnhG family protein [Porphyromonas endodontalis ATCC 35406] gi|229316677|gb|EEN82594.1| ErfK/YbiS/YcfS/YnhG family protein [Porphyromonas endodontalis ATCC 35406] Length = 319 Score = 81.9 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 27/154 (17%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 + I + K + ++ R E KEY CA + +G K + GD + PEGF+ Sbjct: 94 MNNRFDYFIVVDKASMRVLLYNRYGVKE----KEYT-CACARNYGHKAKKGDCRTPEGFF 148 Query: 106 YI-----GWNNLNPNSKYFLSINIG-FPNEFDKAHNRTGADLMIHGECA--------SAG 151 Y + L + + S G + F + + IHG CA S G Sbjct: 149 YAGETFDSTDWLYTDDNGYTSPVRGQYGPRFIRIKGDKNLPVGIHGTCAPWALGRRCSHG 208 Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 C ++N + E+ V Q ++ I P Sbjct: 209 CVRIHNDNILELVKYV--------QPNMPIIINP 234 >gi|255022097|ref|ZP_05294101.1| hypothetical protein ACA_2578 [Acidithiobacillus caldus ATCC 51756] gi|254968455|gb|EET26013.1| hypothetical protein ACA_2578 [Acidithiobacillus caldus ATCC 51756] Length = 276 Score = 81.5 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 67/218 (30%), Gaps = 61/218 (27%) Query: 4 RYNILLFALFIFLNGC---------HHSRSLIDKAEHPLSENLIISMQKKRTSPF-HPTV 53 R L A + L GC H P+ + Q + +P Sbjct: 9 RALWL-CAFPMLLVGCTTQAPAPQVHSVAWYAAHIPPPVIPTVSAPTQSVQPAPAPQELH 67 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + ++ L ++K + LL+ + + P+ GD+ P G Y IG+ Sbjct: 68 IVVDTSDRQLRVYKGD-----ALLETFPVAIGFNGAAPRRTRGDDITPVGKYRIGYVRFG 122 Query: 114 PNSKYFLSINIGFPNEFDKAHNRT----------------------------GADLMIHG 145 +Y + + +PN D G + IHG Sbjct: 123 T--RYGPFMLLTYPNRDDARWGLREGIITQRQYDAIISALDRGEAPPQNTPLGGYIGIHG 180 Query: 146 EC---------------ASAGCYAMNNKQMQEIYAIVR 168 +AGC A++N +++ +VR Sbjct: 181 MGPQFADDPDSKVFPGRWTAGCVALSNWDARQLATLVR 218 >gi|302035740|ref|YP_003796062.1| hypothetical protein NIDE0357 [Candidatus Nitrospira defluvii] gi|300603804|emb|CBK40136.1| exported protein of unknown function, contains TonB box [Candidatus Nitrospira defluvii] Length = 382 Score = 81.5 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 25/134 (18%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I I K + +L ++K + Y I S K GD PEG Y I Sbjct: 223 AIVISKADRVLSLYKNG-----KKVLTYPIRLGSRGIRAKQHYGDGATPEGEYRIHRKRG 277 Query: 113 NPNSKYFLSINIGFPNEFDKAH--------------NRTGADLMIHGECASA-----GCY 153 + + YF ++ + +PN D+ + G + +HG G Sbjct: 278 SGQTPYFRALILDYPNADDRRRFEEAQQSGLIPKSQHMPGL-IQLHGIAQGITDQPYGSI 336 Query: 154 AMNNKQMQEIYAIV 167 ++N Q+ ++ V Sbjct: 337 LLDNPQIAALFDQV 350 >gi|307544800|ref|YP_003897279.1| hypothetical protein HELO_2210 [Halomonas elongata DSM 2581] gi|307216824|emb|CBV42094.1| hypothetical protein HELO_2210 [Halomonas elongata DSM 2581] Length = 214 Score = 81.5 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 65/209 (31%), Gaps = 49/209 (23%) Query: 1 MTNRYNILLFA--LFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 ++ R LFA L L++ + + + + I I Sbjct: 4 LSRRRFGSLFAGLCLALLMPSLSHAGLMEAIQTRDESMDELLTHAGQPRYSNEVWILIDN 63 Query: 59 NENILEIWKRNVDAEYVLLKEY-KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 L +++ N LLK + I G P+ + G P G + + N +SK Sbjct: 64 EAASLSLYRGNT-----LLKYFSPISLGRGGAEPQRQRGGRVTPLGEFRVTR--FNFDSK 116 Query: 118 YFLSINIGFPNE----------------FD------KAHNRT------GADLMIHGE--- 146 + + + +P +D + H G + IHG Sbjct: 117 FHTFVGLNYPTPTHARMALQSGIYSQRDYDDYFAYYRRHGNPPQDTVLGGYIGIHGVGVA 176 Query: 147 --------CASAGCYAMNNKQMQEIYAIV 167 + GC A+ + Q+ + +++ Sbjct: 177 DPEIHRRFHWTDGCVAVTDGQIDTLSSMI 205 >gi|224437280|ref|ZP_03658252.1| hypothetical protein HcinC1_04867 [Helicobacter cinaedi CCUG 18818] Length = 335 Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 9/71 (12%) Query: 97 DEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC-------- 147 D P G Y + + Y L+ + +PN +D++ +TG + IHG Sbjct: 116 DLTTPIGSYDLNARLTGLDQYYGPLAFSTSYPNVYDQSLKKTGGGIWIHGLPLNGNREEL 175 Query: 148 ASAGCYAMNNK 158 + GC A++N+ Sbjct: 176 NTRGCIAIDNE 186 >gi|53805071|ref|YP_113122.1| hypothetical protein MCA0606 [Methylococcus capsulatus str. Bath] gi|53758832|gb|AAU93123.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length = 177 Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 39/129 (30%), Gaps = 41/129 (31%) Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR---- 136 KI G D + P G Y IGW +N NSK+ + +PN Sbjct: 45 KIAIGQHGAGVDKRRNDNKTPLGEYRIGW--INENSKFHRFFGLTYPNPEIAKRGFIRGL 102 Query: 137 ------------------------TGADLMIHGE-----------CASAGCYAMNNKQMQ 161 G + IHG + GC A+ N+Q+ Sbjct: 103 IDEQLVRHILRAHLVEATPPQDTPLGGQIGIHGVGAGNRQVHEMFDWTHGCVALTNEQID 162 Query: 162 EIYAIVRDS 170 ++ VR Sbjct: 163 QLTPWVRKG 171 >gi|32265806|ref|NP_859838.1| hypothetical protein HH0307 [Helicobacter hepaticus ATCC 51449] gi|32261854|gb|AAP76904.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 313 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 61/163 (37%), Gaps = 25/163 (15%) Query: 97 DEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC-------- 147 D P G Y + + Y L+ + +PN +D++ +TG + IHG Sbjct: 94 DLTTPIGSYDLNARLTGLDQYYGPLAFSTNYPNVYDQSLKKTGGGIWIHGLPLNGNREDI 153 Query: 148 ASAGCYAMNNKQMQEIYAIV--RDSLRGNMQSHI-------------QIQAFPFRMTSKN 192 + GC A++N+ +++ I+ + ++ + Q+ + + Sbjct: 154 NTRGCIAIDNELLKKYDKIIDWKKTMLITYEGIFKPTSVDELSIVLSQLYQWKNAWQKND 213 Query: 193 MQLYQNNP-NYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVFF 234 +Q Y N +F+ + F ++ + F + +K Sbjct: 214 LQTYLNFYDEKNFFRPDGMSFKSFREHKKNIFAKNESKNIRIS 256 >gi|313143735|ref|ZP_07805928.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313128766|gb|EFR46383.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 321 Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 9/71 (12%) Query: 97 DEQAPEGFYYIGWNNLNPNSKY-FLSINIGFPNEFDKAHNRTGADLMIHGEC-------- 147 D P G Y + + Y L+ + +PN +D++ +TG + IHG Sbjct: 102 DLTTPIGSYDLNARLTGLDQYYGPLAFSTSYPNVYDQSLKKTGGGIWIHGLPLNGNREEL 161 Query: 148 ASAGCYAMNNK 158 + GC A++N+ Sbjct: 162 NTRGCIAIDNE 172 >gi|270159738|ref|ZP_06188394.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|289165491|ref|YP_003455629.1| hypothetical protein LLO_2163 [Legionella longbeachae NSW150] gi|269988077|gb|EEZ94332.1| conserved hypothetical protein [Legionella longbeachae D-4968] gi|288858664|emb|CBJ12559.1| putative conserved hypothetical proteins [Legionella longbeachae NSW150] Length = 162 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 23/131 (17%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + + IL I K ++K +K+ + G K + GD + P G Y + + Sbjct: 31 INVHTTKRILNICKNGT-----VIKTFKVALGNKGIG-KKKAGDNKTPIGLYGL--AHPR 82 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------------ASAGCYAMN-NK 158 ++++ + I I +P +A TG D+ IHG ++ GC A+ N Sbjct: 83 KSNQFKVFIPILYPTTKQRAAGYTGRDVGIHGPTQSSNSFGWLNNLPYSTRGCIAVGKNN 142 Query: 159 QMQEIYAIVRD 169 + + V+ Sbjct: 143 YIDYVANWVKA 153 >gi|197123988|ref|YP_002135939.1| hypothetical protein AnaeK_3597 [Anaeromyxobacter sp. K] gi|196173837|gb|ACG74810.1| conserved hypothetical protein [Anaeromyxobacter sp. K] Length = 171 Score = 79.6 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 36/183 (19%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 MT A + + + ++ P P P + + Sbjct: 1 MTPIALRTAVAALLLVPPLAFLLACAQRSGPPACP------------PADPV-VLVETVH 47 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + + A + + S G K GD + P G Y +G P++ + Sbjct: 48 RRLALCEAGAAAA-----VFPVALGSAGTG-KRVEGDRRTPLGAYALGA--PRPSAGFGT 99 Query: 121 SINIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAM-NNKQMQEIYA 165 I I +P + TG+++ IHG +AGC A+ ++ ++ + A Sbjct: 100 FIPIAYPTAEQRRAGFTGSNVGIHGPSRATRWAGRLNTWTDWTAGCVALGSDPDVRAVAA 159 Query: 166 IVR 168 Sbjct: 160 FAE 162 >gi|237804047|ref|ZP_04591632.1| hypothetical protein POR16_30526 [Pseudomonas syringae pv. oryzae str. 1_6] gi|237805685|ref|ZP_04592389.1| hypothetical protein POR16_34412 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331026028|gb|EGI06084.1| hypothetical protein POR16_30526 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331026793|gb|EGI06848.1| hypothetical protein POR16_34412 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 88 Score = 79.2 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 19/79 (24%) Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------------ASAG 151 P++ Y LS++I +PN D A R G+ +MIHG + G Sbjct: 3 WRKPSNNYNLSMHISYPNITDSARARNEGVKPGSMIMIHGTPVDEEYPEWYFHTLDWTNG 62 Query: 152 CYAMNNKQMQEIYAIVRDS 170 C AM N M+E++ +V+D Sbjct: 63 CIAMKNNDMREVWDLVKDG 81 >gi|54294978|ref|YP_127393.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens] gi|53754810|emb|CAH16297.1| hypothetical protein lpl2057 [Legionella pneumophila str. Lens] Length = 162 Score = 77.6 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 65/184 (35%), Gaps = 46/184 (25%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R + A+F + A PLS I + + Sbjct: 1 MKIRAIFFMIAIFFPVT------LFASDATCPLSNG-----------------INVLTKK 37 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 IL I K ++K +K+ G K + GD + P G Y + + ++++ + Sbjct: 38 RILNICKNGT-----VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGL--AHPRKSNQFKV 89 Query: 121 SINIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAMN-NKQMQEIYA 165 I I +P + A TG D+ IHG ++ GC A+ N ++ + Sbjct: 90 FIPILYPTKQQLAAGYTGRDVGIHGPTQSPGVFGWLNNLPGSTRGCVAVGKNNYIEYVAN 149 Query: 166 IVRD 169 V+ Sbjct: 150 WVKA 153 >gi|77165191|ref|YP_343716.1| ErfK/YbiS/YcfS/YnhG [Nitrosococcus oceani ATCC 19707] gi|254434430|ref|ZP_05047938.1| hypothetical protein NOC27_1361 [Nitrosococcus oceani AFC27] gi|76883505|gb|ABA58186.1| ErfK/YbiS/YcfS/YnhG [Nitrosococcus oceani ATCC 19707] gi|207090763|gb|EDZ68034.1| hypothetical protein NOC27_1361 [Nitrosococcus oceani AFC27] Length = 213 Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 53/158 (33%), Gaps = 50/158 (31%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + I K++ +L + K ++K+Y G G K GD+ PEG Y I Sbjct: 33 LIIIKSKRLLIVKKGG-----QIIKKYHAALGQGGGGGKRIEGDKHTPEGEYEIVG--FW 85 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADL-------------------------------- 141 P+ K+ I++ +P+ D + Sbjct: 86 PSHKFHYFIHLDYPSRGDALAGYKEGLISWDELVHIYRAQQEKNGIPPQQTRLGGFIGIH 145 Query: 142 ----------MIHGE-CASAGCYAMNNKQMQEIYAIVR 168 MIH + GC A+ N+++ E+ ++ Sbjct: 146 GIGEETRKKLMIHRNFNWTRGCVALTNREIDELRQFIQ 183 >gi|307610960|emb|CBX00579.1| hypothetical protein LPW_22971 [Legionella pneumophila 130b] Length = 154 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 23/131 (17%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + + IL I K ++K +K+ G K + GD + P G Y + + Sbjct: 23 INVLTKKRILNICKNGT-----VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGL--AHPR 74 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAMN-NK 158 ++++ + I I +P + A TG D+ IHG ++ GC A+ N Sbjct: 75 KSNQFKVFIPILYPTKQQLAAGYTGRDVGIHGPTQSPGVFGWLNNLPGSTRGCVAVGKNN 134 Query: 159 QMQEIYAIVRD 169 ++ + V+ Sbjct: 135 YIEYVANWVKA 145 >gi|54298010|ref|YP_124379.1| hypothetical protein lpp2067 [Legionella pneumophila str. Paris] gi|148359657|ref|YP_001250864.1| hypothetical protein LPC_1575 [Legionella pneumophila str. Corby] gi|296107703|ref|YP_003619404.1| putative protein conserved in bacteria [Legionella pneumophila 2300/99 Alcoy] gi|53751795|emb|CAH13219.1| hypothetical protein lpp2067 [Legionella pneumophila str. Paris] gi|148281430|gb|ABQ55518.1| conserved hypothetical protein [Legionella pneumophila str. Corby] gi|295649605|gb|ADG25452.1| putative protein conserved in bacteria [Legionella pneumophila 2300/99 Alcoy] Length = 162 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 23/131 (17%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + + IL I K ++K +K+ G K + GD + P G Y + + Sbjct: 31 INVLTKKRILNICKNGT-----VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGL--AHPR 82 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAMN-NK 158 ++++ + I I +P + A TG D+ IHG ++ GC A+ N Sbjct: 83 KSNQFKVFIPILYPTKKQLAAGYTGRDVGIHGPTQSPGVFSWLNNLPGSTRGCVAVGKNN 142 Query: 159 QMQEIYAIVRD 169 ++ + V+ Sbjct: 143 YIEYVANWVKA 153 >gi|254496265|ref|ZP_05109158.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254354522|gb|EET13164.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 162 Score = 76.5 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 62/176 (35%), Gaps = 46/176 (26%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + LL ++F + A PLS I + + Sbjct: 1 MKIKAISLLISIFFPVA------LFASTATCPLSNG-----------------INVHTTK 37 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 IL I K ++K +K+ + G K GD + P G Y + + ++++ + Sbjct: 38 QILNICKHGT-----VIKTFKVALGNKGVG-KKRAGDNKTPIGLYGL--AHPRKSNQFKV 89 Query: 121 SINIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAMN-NKQMQ 161 I I +P A TG D+ IHG ++ GC A+ N ++ Sbjct: 90 FIPILYPTTKQLAAGYTGRDVGIHGPTQSSNWFSWLNNLPNSTRGCIAVGKNNHIE 145 >gi|52842341|ref|YP_096140.1| hypothetical protein lpg2127 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629452|gb|AAU28193.1| hypothetical protein lpg2127 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 162 Score = 76.5 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 50/186 (26%) Query: 1 MTNRYNILLFALFIF--LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 M R + A+F L + + L + I + Sbjct: 1 MKIRAIFFMIAIFFPVTLFASNTTCPLSNG-------------------------INVLT 35 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 + IL I K ++K +K+ G K + GD + P G Y + + ++++ Sbjct: 36 KKRILNICKNGT-----VVKTFKVALGYKGVG-KKKAGDNKTPIGLYGL--AHPRKSNQF 87 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIHG--------------ECASAGCYAMN-NKQMQEI 163 + I I +P + A +G D+ IHG ++ GC A+ N ++ + Sbjct: 88 KVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSNLFGWLNNLPGSTRGCVAVGKNNYIEYV 147 Query: 164 YAIVRD 169 V+ Sbjct: 148 ANWVKA 153 >gi|165924287|ref|ZP_02220119.1| putative lipoprotein [Coxiella burnetii RSA 334] gi|165916267|gb|EDR34871.1| putative lipoprotein [Coxiella burnetii RSA 334] Length = 107 Score = 73.4 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 10/82 (12%) Query: 114 PNSKYFLSINIGFPNEFDKAHNRT------GADLMIHGECASAGCYAMNNKQMQEIYAIV 167 P S++ LS+ + +PN D+ + R G D+ IHG AS GC + NK +++++ + Sbjct: 1 PASRFDLSLMLNYPNSADRYYARLDHRHDLGDDIFIHGSDASIGCIPIGNKAIEQLFVLA 60 Query: 168 RDSLRGNMQSHIQIQAFPFRMT 189 + HI++ P + Sbjct: 61 ----YLVGERHIKVIIAPDDLR 78 >gi|295111271|emb|CBL28021.1| Uncharacterized protein conserved in bacteria [Synergistetes bacterium SGP1] Length = 263 Score = 72.6 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 31/173 (17%) Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHP------TVIRIFKNENILEIWKRNV 70 +++ + E P E ++ S P I I K + L +++ Sbjct: 90 AASSEPGAVLPEVEEPEDETPQMTEPTPTPSALRPPRDAGKYWILINKGQYRLSLYRGRD 149 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----GWNNLNPNSKYFLSINIG 125 L+K Y + G K GD + PEG + + + I Sbjct: 150 -----LVKTYNVAIGKNP-GNKRRVGDNRTPEGQFRVLSIENASGWKHDFGDGKGEIAGA 203 Query: 126 FPNEFDKAHNRTGA--DLMIHGEC--------ASAGCYAMNNKQMQEI--YAI 166 + F + TG + IHG AS GC MNN +++++ YA Sbjct: 204 YGPWFIRL--DTGGWKGIGIHGTHAPDSLGTMASEGCIRMNNDEIRDLKNYAY 254 >gi|295798113|emb|CAX68938.1| ErfK/YbiS/YcfS/YnhG family protein [uncultured bacterium] Length = 267 Score = 72.3 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 31/129 (24%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I++ K+EN L +++ + L+K Y++C G K P G + I + Sbjct: 147 IKVDKSENKLRLYQDD-----ALIKTYRVCT-----GEK-----NSTPVGTFTIETKLED 191 Query: 114 PNSKYFLSINIGFP--NEFDKAHNR-TGADLM---IHGEC--------ASAGCYAMNNKQ 159 P ++ S + P + R G L IHG AS+GC M NK Sbjct: 192 P--TWYKSPGVAIPPKTPENILGTRWMGFSLASYGIHGTTLPETIGTQASSGCIRMLNKD 249 Query: 160 MQEIYAIVR 168 ++E+Y+IV Sbjct: 250 VEELYSIVP 258 >gi|92113689|ref|YP_573617.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] gi|91796779|gb|ABE58918.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 45/170 (26%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 L+ + + I E L+I++ + + + + G + G Sbjct: 17 LLAWNMPSAMAADDEIWVLIDDREATLDIYR----GDTRIERFEPVSLGRGGTARVRKQG 72 Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT------------------- 137 P G ++I +N SK+ + + + +P Sbjct: 73 SNMTPTGEFHINR--INRESKFNIFLGLDYPKLETAREAMRAGLMSPAEYADFQDAYYRN 130 Query: 138 ---------GADLMIHGE-----------CASAGCYAMNNKQMQEIYAIV 167 G + IHG + GC A+ N Q++E+ +V Sbjct: 131 GAPPQDTVLGGYIGIHGLGASDPDIHRRFHWTEGCVAVTNPQIEELTRLV 180 >gi|255593471|ref|XP_002535877.1| conserved hypothetical protein [Ricinus communis] gi|223521663|gb|EEF26508.1| conserved hypothetical protein [Ricinus communis] Length = 197 Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 48/123 (39%), Gaps = 29/123 (23%) Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIHGECA---------SAGCYAMNNKQMQEIYAIV 167 + + +PNE+DK + G + +HG + S GC + N + + ++ Sbjct: 2 YGTAAYPLSYPNEWDKHRGKNGHGIWLHGTPSNTYSRPPRASDGCVVLTNPDISALAPVL 61 Query: 168 R----------------DSLRGNMQSHIQ-IQAFPFRMTSKNMQLYQNNPNYSFW---NM 207 + ++L+ +S +Q ++ + ++N + Y + + F+ Sbjct: 62 QEGRTPVVIVGSNLGNPEALQAERESLMQAMEQWRRDWEAQNTEDYLSKYSRDFFSEGKN 121 Query: 208 LKL 210 LK Sbjct: 122 LKT 124 >gi|227825038|ref|ZP_03989870.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905537|gb|EEH91455.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 224 Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 23/165 (13%) Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81 + + A P + I + K + L + + +++ Y Sbjct: 56 PQKAPEPAISPEKAKEADRKESISLDASKSYHIIVEKKAHRLSLLLGDT-----VVRSYG 110 Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIG-----WNNLNPNSKYFLSINIGFPNEFDKA--H 134 G G K GD P G + + + + I + F Sbjct: 111 CAIGKGGLGQKQRRGDNMTPVGTFTVDEIDDASSWPHDFGDGRGEIAGAYGPWFISLDTE 170 Query: 135 NRTGA---DLMIH--------GECASAGCYAMNNKQMQEIYAIVR 168 +G + IH G AS GC ++N+ +QE+ ++V+ Sbjct: 171 ALSGGAWDGIGIHGTHDPQSIGTDASEGCIRLHNEDLQELRSVVK 215 >gi|300114070|ref|YP_003760645.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113] gi|299540007|gb|ADJ28324.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113] Length = 213 Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 50/175 (28%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 L + + S P + I K++ +L + K ++K Y G G K G Sbjct: 16 LANPLVEAAPSTEFPYELIIIKSKRLLIVKKGR-----QIIKRYHAAFGRGGVGGKRVEG 70 Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL--------------- 141 D+ PEG Y + P+ K+ I++ +P+ D + Sbjct: 71 DKHTPEGNYEVVG--FWPSHKFHYFIHLDYPSRGDALVGYKKGLISRQELLHIYRAQQEK 128 Query: 142 ---------------------------MIHGE-CASAGCYAMNNKQMQEIYAIVR 168 MIH + GC A+ N ++ E+ ++ Sbjct: 129 NGIPPQQTRLGGFIGIHGIGVETRKKLMIHRNFDWTRGCVALTNTEIDELRQFIQ 183 >gi|198282860|ref|YP_002219181.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667021|ref|YP_002425061.1| ErfK/YbiS/YcfS/YnhG family [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247381|gb|ACH82974.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519234|gb|ACK79820.1| ErfK/YbiS/YcfS/YnhG family [Acidithiobacillus ferrooxidans ATCC 23270] Length = 281 Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 50/160 (31%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I I + L+I+K +L Y + PK GD+ P G Y IGW Sbjct: 66 VHIVISTITHSLKIFKGGT-----VLATYPVAIGFHGAAPKRMRGDDVTPVGRYRIGW-- 118 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRT----------------------------GADLMI 143 ++ ++Y + + +PN + G ++ I Sbjct: 119 VSRGTRYGPFMGLTYPNRENAEWGLREGIINRAQYRAIVDAIDAGQTPPQNTPLGGEIGI 178 Query: 144 HGEC---------------ASAGCYAMNNKQMQEIYAIVR 168 HG +AGC A++N Q+I A+VR Sbjct: 179 HGMGPQFSDDPQSKVFPGRWTAGCVALSNWDAQQIAALVR 218 >gi|312880800|ref|ZP_07740600.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM 12260] gi|310784091|gb|EFQ24489.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM 12260] Length = 156 Score = 70.3 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 22/140 (15%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 P ++I K ++ L +++ + + + S G K GD + PEG + Sbjct: 20 EPAGEVWLKIEKGQHRLVVFRGQ-----AVWDAFPVALGSNP-GQKQRRGDRRTPEGEFS 73 Query: 107 I-----GWNNLNPNSKYFLSINIGFPNEFDKAHNRTG-ADLMIHGE--------CASAGC 152 + + I + F + +TG + IHG + GC Sbjct: 74 VVRIQDSRAWTHDFRDGKGEIPGAYGPWFIRL--KTGWDGIGIHGTHDPSSVGKDVTEGC 131 Query: 153 YAMNNKQMQEIYAIVRDSLR 172 + N +Q++ +VR R Sbjct: 132 IRLRNADLQKLRPLVRRGTR 151 >gi|261884737|ref|ZP_06008776.1| putative periplasmic protein [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 200 Score = 69.2 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 27/149 (18%) Query: 114 PNSKYFL--SINIGFPNEFDKAHNRTGADLMIHGEC----------ASAGCYAMNNKQMQ 161 P Y+ S N+ +PN FDK +RTG + IHG + GC M N + Sbjct: 1 PEDTYYGPVSFNLSYPNLFDKLRDRTGGGIWIHGFPLSGNIREDVYKTKGCVVMPNDLLL 60 Query: 162 EIYAIVRD--SLRGNMQSHI-------------QIQAFPFRMTSKNMQLYQNNPNYSFWN 206 + +I++D + +S I ++ + T+ ++ Y + + F Sbjct: 61 NLESILKDNGGMVLINESGILEAKNEDIALIFAELFKWKEAWTNSDIDRYLSFYDKKFKR 120 Query: 207 MLKLGHDYFEKNHQEPFIQIINKQYVFFK 235 +G D F++ + F + NK F K Sbjct: 121 YDGVGFDKFKEMKKNIFSRKENKFIQFTK 149 >gi|307824797|ref|ZP_07655020.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum SV96] gi|307734155|gb|EFO05009.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum SV96] Length = 180 Score = 68.8 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 35/122 (28%), Gaps = 41/122 (33%) Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT--- 137 I G G K GD P G Y IGW + +S + + +P+ D Sbjct: 48 DIAIGRGGAGFKSHQGDNVTPFGSYRIGW--VGESSSFRKFFGLTYPSAEDAQKALEEGV 105 Query: 138 -------------------------GADLMIHG-----------ECASAGCYAMNNKQMQ 161 G + IHG + GC A+ N Q+ Sbjct: 106 INQVAYNSIITAHRFHQVPPQNTPLGGRIGIHGLGRADEKIHKSMNWTHGCIALTNGQID 165 Query: 162 EI 163 + Sbjct: 166 HL 167 >gi|294101487|ref|YP_003553345.1| ErfK/YbiS/YcfS/YnhG family protein [Aminobacterium colombiense DSM 12261] gi|293616467|gb|ADE56621.1| ErfK/YbiS/YcfS/YnhG family protein [Aminobacterium colombiense DSM 12261] Length = 167 Score = 68.4 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 59/185 (31%), Gaps = 38/185 (20%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + ILL F ++ +K P I + K + Sbjct: 1 MKIKNLILLTFFLCFFAAANNPALSGEKTYA----------------HEPPDRIVVEKRK 44 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW-----NNLNPN 115 +L +++ + + + + G K GD + P G + + + ++ Sbjct: 45 FVLTLYREGKE-----VLSFPVAVGRNK-GNKQRVGDLRTPVGTFMVERIHDSSHWVHDF 98 Query: 116 SKYFLSINIGFPNEFDKAHNRTG-ADLMIHGEC--------ASAGCYAMNNKQMQEIYAI 166 I + F + +TG + + IHG A+ GC + N ++ + Sbjct: 99 KDGKGPIKGAYGPWFIRL--KTGWSGIGIHGTHDPGSIGQRATEGCVRLRNDHLELLVKH 156 Query: 167 VRDSL 171 V L Sbjct: 157 VEPGL 161 >gi|284049125|ref|YP_003399464.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM 20731] gi|283953346|gb|ADB48149.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM 20731] Length = 241 Score = 68.4 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 35/184 (19%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSP----------FHPTVIRIFKNENILEIWKRNVDA 72 +L +K E P+ + K+ +P + + K+++ L + + Sbjct: 64 PALPEKKETPVESLQKKQKEPKQVAPQPAAEQPLVPGKKYAVLVDKSDHKLYLKDGDT-- 121 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-----WNNLNPNSKYFLSINIGFP 127 +++ + G G K GD P G + I + I + Sbjct: 122 ---VVRTWGCAIGKGGLGQKERRGDNMTPVGTFRIDEIDDASGWTHDFGDGNGEIQGAYG 178 Query: 128 N------EFDKAHNRTGADLMIH--------GECASAGCYAMNNKQMQEIYAIVRDSLRG 173 D + + IH G AS GC ++N ++E+ + + Sbjct: 179 PWFLSLDTEDLSQG-NWDGIGIHGTHDPASIGTDASEGCVRLDNANLRELEKVAYVGMPV 237 Query: 174 NMQS 177 +Q Sbjct: 238 TIQD 241 >gi|290476305|ref|YP_003469209.1| hypothetical protein XBJ1_3327 [Xenorhabdus bovienii SS-2004] gi|289175642|emb|CBJ82445.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004] Length = 67 Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 31/46 (67%) Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQIINKQYVF 233 MT +NMQ Y+NN NYSFW L+ ++YF KN + + +I+ QY+ Sbjct: 1 MTQQNMQRYRNNDNYSFWIQLQPAYEYFAKNSKPTTVNVIDGQYIV 46 >gi|254489736|ref|ZP_05102931.1| hypothetical protein MDMS009_67 [Methylophaga thiooxidans DMS010] gi|224464821|gb|EEF81075.1| hypothetical protein MDMS009_67 [Methylophaga thiooxydans DMS010] Length = 187 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 66/210 (31%), Gaps = 73/210 (34%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 NR I++ A L ++ + + I ++E Sbjct: 2 NRSLIVMLACLSLLVWQQPVKATGN------------------------YELVIKRSEKR 37 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L I K +L+ + + SG K+++GD P G Y+I + + ++ + I Sbjct: 38 LLIQKDG-----EVLRSFHVALGSGGRKAKMKSGDRLTPLGKYHIT--QVRDSDRFHMFI 90 Query: 123 NIGFPNEFD-----------KAHNRT-------GA-----------------------DL 141 + +P+ D KA R G + Sbjct: 91 QLDYPSVRDAITALKEDRISKAQYRKILDAHIFGNLPPQNTPLGGAIGIHGIGVETKDKI 150 Query: 142 MIHG-ECASAGCYAMNNKQMQEIYAIVRDS 170 IH + GC A+ N +++++ + Sbjct: 151 EIHEIADWTKGCIALRNDEIEQLTKYISKG 180 >gi|312879709|ref|ZP_07739509.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM 12260] gi|310783000|gb|EFQ23398.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM 12260] Length = 198 Score = 65.7 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 37/156 (23%) Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100 I++ K+ L ++ + L+K Y + G K + D Sbjct: 23 QAAPFVPGPEEYWIKVDKSRLRLYLF----QGKDTLVKSYPVAVGRGVGDVKKDRLDLIT 78 Query: 101 PEGFYYI-----GWNNLNPNSKY-----------FLSINIGFPNEFDKAHNRTGADLMIH 144 PEG + + + L + + + S I F N + + IH Sbjct: 79 PEGVFKVRRVLQDASQLVYDPAWFDEPGEPQKGVYGSKLISFYNPW---------QIAIH 129 Query: 145 GECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172 G + + GC M N+ + + A V+ ++ Sbjct: 130 GTNSPRSVGRRATHGCIRMKNRDINTLVAYVKPGMK 165 >gi|313145199|ref|ZP_07807392.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313133966|gb|EFR51326.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 162 Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 20/129 (15%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----G 108 + I K+E L + + I +G K + GD + PEG + I Sbjct: 22 LLISKDEMKLRLIDYKGQELF----TADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQDA 76 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGA-DLMIHGEC--------ASAGCYAMNNKQ 159 + I + N F + G + IHG A+ GC + N + Sbjct: 77 SKWKHDFGDGKGEIEGAYGNHFIRLET-PGHKGIGIHGTHDPLSIGTRATEGCIRIKNSE 135 Query: 160 MQEIYAIVR 168 ++++ +++R Sbjct: 136 LEQLVSLIR 144 >gi|253563984|ref|ZP_04841441.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947760|gb|EES88042.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161709|emb|CBW21249.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis 638R] Length = 183 Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 20/129 (15%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----G 108 + I K+E L + + I +G K + GD + PEG + I Sbjct: 44 LLISKDEMKLRLIDYKGQELF----TADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQDA 98 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGA-DLMIHGEC--------ASAGCYAMNNKQ 159 + I + N F + G + IHG A+ GC + N + Sbjct: 99 SKWKHDFGDGKGEIEGAYGNHFIRLET-PGHKGIGIHGTHDPLSIGTRATEGCIRIKNSE 157 Query: 160 MQEIYAIVR 168 ++++ +++R Sbjct: 158 LEQLVSLIR 166 >gi|53711980|ref|YP_097972.1| hypothetical protein BF0691 [Bacteroides fragilis YCH46] gi|60680184|ref|YP_210328.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis NCTC 9343] gi|52214845|dbj|BAD47438.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60491618|emb|CAH06370.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis NCTC 9343] Length = 183 Score = 65.3 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 20/129 (15%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----G 108 + I K+E L + + I +G K + GD + PEG + I Sbjct: 44 LLISKDEMKLRLIDYKGQELF----TADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQDA 98 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGA-DLMIHGEC--------ASAGCYAMNNKQ 159 + I + N F + G + IHG A+ GC + N + Sbjct: 99 SKWKHDFGDGKGEIEGAYGNHFIRLET-PGHKGIGIHGTHDPLSIGTRATEGCIRIKNSE 157 Query: 160 MQEIYAIVR 168 ++++ +++R Sbjct: 158 LEQLVSLIR 166 >gi|255007504|ref|ZP_05279630.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bacteroides fragilis 3_1_12] Length = 184 Score = 64.9 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 20/129 (15%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----G 108 + I K+E L + + I +G K + GD + PEG + I Sbjct: 44 LLISKDEMKLRLIDYKGQELF----TADIACGKN-YGNKEKQGDLKTPEGTFKIIDIQDA 98 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGA-DLMIHGEC--------ASAGCYAMNNKQ 159 + I + N F + G + IHG A+ GC + N + Sbjct: 99 SKWKHDFGDGKGEIEGAYGNHFIRLET-PGHKGIGIHGTHDPLSIGTRATEGCIRIKNSE 157 Query: 160 MQEIYAIVR 168 ++++ +++R Sbjct: 158 LEQLVSLIR 166 >gi|78044166|ref|YP_359174.1| putative peptidoglycan-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77996281|gb|ABB15180.1| putative peptidoglycan-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 214 Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 61/197 (30%), Gaps = 69/197 (35%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + L+F + PL+ +I I Sbjct: 1 MVKKLFFLVFLMIFL---------------TPLTG-----------LANEKNIIVIETRT 34 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP--EGFYYIGWNNLNPNSKY 118 +L +++ N L+K+Y + GD + P G + I + N S + Sbjct: 35 RLLYLFREN-----KLVKKYPVAL-----------GDLKTPTPIGCFKITFMRKNWGSGF 78 Query: 119 F-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRD 169 + + P G IHG S GC M N+ ++E+Y V Sbjct: 79 GSRFLGLNVP------WGMYG----IHGTNKPGSIGSYASHGCIRMLNRHVEELYEKV-- 126 Query: 170 SLRGNMQSHIQIQAFPF 186 ++Q + I PF Sbjct: 127 ----HLQDQVIILGNPF 139 >gi|308068492|ref|YP_003870097.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681] gi|305857771|gb|ADM69559.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681] Length = 474 Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 26/164 (15%) Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEIWKRNVD 71 + G +++ A+ + +++ P I + K+++ L + N Sbjct: 291 LLASPGQGTGKAVDLDADSTAESSPLLASSLHGRPFLGQPLRIVVDKSKHRLALVSGN-- 348 Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK-----YFLSINIGF 126 VL++ Y I E+ PEG + I +NPN K + + Sbjct: 349 ---VLIRNYPIGLGG-----------ERTPEGKFVITDKVVNPNGKSNGEFGSRGMQLSA 394 Query: 127 PNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170 N N+ + G+ S GC M + ++E++A+V Sbjct: 395 TNYAIHGTNKP-DSI---GKNESLGCVRMGKEDVEELFALVPSG 434 >gi|194332934|ref|YP_002014794.1| hypothetical protein Paes_0087 [Prosthecochloris aestuarii DSM 271] gi|194310752|gb|ACF45147.1| hypothetical protein Paes_0087 [Prosthecochloris aestuarii DSM 271] Length = 93 Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 27/80 (33%) Query: 125 GFPNEFDKAHNR-----TGADLMIHGEC--------------ASAGCYAMNNKQMQEIYA 165 +P+ D+ R G D+ IHG + GC A+ N +M E++ Sbjct: 22 DYPDPTDRMRARKAGLHPGGDICIHGWPDSVGQRGAVPLTGDWTLGCIAVTNDEMDELWH 81 Query: 166 IVRDSLRGNMQSHIQIQAFP 185 V + +P Sbjct: 82 AVPVGT--------PVIIYP 93 >gi|114330567|ref|YP_746789.1| hypothetical protein Neut_0550 [Nitrosomonas eutropha C91] gi|114307581|gb|ABI58824.1| conserved hypothetical protein [Nitrosomonas eutropha C91] Length = 181 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 47/159 (29%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I +E+ L + +++ +L + + GD Q P G + I Sbjct: 22 QDVWILIDTSEHRLSVMRKD-----KVLLTFDNVAIGRYGASRSRMRGDNQTPLGSFQIS 76 Query: 109 WNNLNPNSKYFLSINIGFPNEF--DKAH--NRTGADLM---------------------- 142 W + + +++ I +PN D A R + Sbjct: 77 W--VKQHDRFYRFYGINYPNREVADLALSEGRISRQVWENIMNAIESTGLSPQDTSLGGY 134 Query: 143 ------------IHGE-CASAGCYAMNNKQMQEIYAIVR 168 +H + GC A+ N Q+ ++ V+ Sbjct: 135 IGIHGIGKGDQAVHSRFNWTNGCVALTNVQIDQLNPWVK 173 >gi|310641373|ref|YP_003946131.1| erfk/ybis/ycfs/ynhg family protein [Paenibacillus polymyxa SC2] gi|309246323|gb|ADO55890.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa SC2] Length = 476 Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 62/176 (35%), Gaps = 44/176 (25%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P I + K+++ L + N+ L++ Y I E+ PEG + I Sbjct: 329 LEQPLRIVVDKSKHRLALVSGNI-----LIRNYPIGLGG-----------ERTPEGKFVI 372 Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNR----TGADLMIHGECA--------SAGCYAM 155 +NPN K + T + HG S GC M Sbjct: 373 TDKVVNPNGKSNGEFG---------SRGMQLSATNYAI--HGTNEPESIGKNESLGCVRM 421 Query: 156 NNKQMQEIYAIVRDSLR---GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF-WNM 207 + ++E++A+V GN Q+ R TS+ Q Q NP+ ++ W Sbjct: 422 GKEDVEELFALVPSGTEVVIGNGGLPDQVLVPSSRFTSE-PQHDQTNPHKTYHWLN 476 >gi|289522182|ref|ZP_06439036.1| ErfK/YbiS/YcfS/YnhG family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504018|gb|EFD25182.1| ErfK/YbiS/YcfS/YnhG family protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 225 Score = 61.1 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 27/127 (21%) Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK 117 K E++L V+ + + G K++ GD + PEG +Y+ +S Sbjct: 94 KKEHVLLALSETDK---VIYGGWMVATGRNP-GQKLKVGDMRTPEGVFYV---KSIEDSS 146 Query: 118 YFLSI-------NIGFPNEFDKAHNRTG-ADLMIH----------GECASAGCYAMNNKQ 159 ++ S IG+ F + TG + IH G AS GC M N Sbjct: 147 FWGSYVDKATKERIGYGPYFIRLE--TGWKGIGIHGTDDEHLHEIGTDASHGCIRMANDD 204 Query: 160 MQEIYAI 166 + E+ ++ Sbjct: 205 LLEVVSM 211 >gi|224536863|ref|ZP_03677402.1| hypothetical protein BACCELL_01739 [Bacteroides cellulosilyticus DSM 14838] gi|224521529|gb|EEF90634.1| hypothetical protein BACCELL_01739 [Bacteroides cellulosilyticus DSM 14838] Length = 181 Score = 61.1 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 20/128 (15%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG----- 108 I I K E L + + + G K + GD + PEG + + Sbjct: 40 ILISKQEMKLRLIDYKGQEIFCA----PVATGKN-VGDKRKQGDMRTPEGVFQVSDIQRA 94 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGA-DLMIHGEC--------ASAGCYAMNNKQ 159 + + I+ + + F + G + IHG AS GC M N+ Sbjct: 95 TDWKHDFGDGKGEIDGAYGDFFIRLL-VPGHKGIGIHGTHLPESIGTRASEGCIRMYNED 153 Query: 160 MQEIYAIV 167 ++++ +++ Sbjct: 154 LKKLVSLI 161 >gi|260593416|ref|ZP_05858874.1| ErfK/YbiS/YcfS/YnhG family protein [Prevotella veroralis F0319] gi|260534692|gb|EEX17309.1| ErfK/YbiS/YcfS/YnhG family protein [Prevotella veroralis F0319] Length = 330 Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 61/169 (36%), Gaps = 24/169 (14%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE-------GF 104 I + K + L ++ + L+ Y CA+S G K + GD + P Sbjct: 98 LFIVMSKKDYYLYVY-EPQGKDTTLIARYD-CAFSLKKGQKEKEGDMRTPHCTIDNPFHV 155 Query: 105 YYIGWNNLNPNSKYFLSINI-GFPNEFDKAHNRTGADLMIHGECA---------SAGCYA 154 I + + I + + F + + + IHG S GC Sbjct: 156 QQIVSASNWEHDFGDGRGKIKSYGDYFLRLKTPGHSGIGIHGSTNNRESVPGRASEGCIR 215 Query: 155 MNNKQMQEIY-AIVRDSLRGNMQSHIQIQAFPF---RMTSKNMQLYQNN 199 + ++ ++++ + ++ +++ + +PF M + ++ ++ Sbjct: 216 LKDEDIKDLSENYATEGMKVVIKAE-NVDDYPFEIHAMKRQKIERKRHF 263 >gi|317473568|ref|ZP_07932858.1| ykud domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316898970|gb|EFV20994.1| ykud domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 226 Score = 60.7 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 66/224 (29%), Gaps = 57/224 (25%) Query: 1 MTNRY--NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 M R+ +L+ L + G + A S + S ++ +K Sbjct: 2 MKKRWMAIVLMAVLIWNMAGTNLETRTAYAASKQTIWQKKFSQYRYNKSVNQLIFVK-YK 60 Query: 59 NENILEIWK-RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW-------- 109 ++ ++ + D ++ + + K K GD + P G + Sbjct: 61 KKSKATVYMYQKRDHKWKRILKCKGYVGKKGI-HKKREGDLKTPSGTFGFTGAFGIKKNP 119 Query: 110 --------------------------------------NNLNPNSKYFLSINIGFPNEFD 131 + ++ Y+ + + + N Sbjct: 120 GAKMNYTRVNKYLYWCGDKKYYNRLIDVRKKKHRCRGEHLIDYKPHYYYGMFLNY-NP-- 176 Query: 132 KAHNRTGADLMIH---GECASAGCYAMNNKQMQEIYAIVRDSLR 172 K + G+ + +H + +AGC A++ K M++I R Sbjct: 177 KHKYKKGSAIFLHCKGKKPYTAGCIAVSRKNMKKIIKNAESGAR 220 >gi|269792192|ref|YP_003317096.1| ErfK/YbiS/YcfS/YnhG family protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099827|gb|ACZ18814.1| ErfK/YbiS/YcfS/YnhG family protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 228 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 22/138 (15%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 T I+I K++ L + K +K + + G K + D PEG + Sbjct: 28 TPEKDEYWIKIDKSKLRLYLMKGEEQ-----VKSFPVAIGRGKGDVKKDRLDLITPEGVF 82 Query: 106 YI------------GWNNLN----PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECAS 149 + + N P + S I F N + A + T + I G+ + Sbjct: 83 KVRRIVQDARNMVFDPSWFNEPGEPQKGVYGSKLISFYNPWQIAIHGTNSPSSI-GKRVT 141 Query: 150 AGCYAMNNKQMQEIYAIV 167 GC M N+ ++ + + Sbjct: 142 HGCIRMRNRDIETLVTYI 159 >gi|302390198|ref|YP_003826019.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosediminibacter oceani DSM 16646] gi|302200826|gb|ADL08396.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosediminibacter oceani DSM 16646] Length = 229 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 51/182 (28%), Gaps = 44/182 (24%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M ++ F + IFL S A P S P I I+ E Sbjct: 1 MRKSIRVIAF-MIIFLM----SFYSPSPAYQPTSPKPPDK-------PQGDVSIVIYALE 48 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + K + + + D P G + I + Sbjct: 49 RKLVVMVDG-----KPFKTFPVAVGTF---------DTPTPIGLFRITEKSKWGEGFGTR 94 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR 172 + + P G IHG S GC M+N+ ++++Y V+ + Sbjct: 95 WMRLSVP------WGTYG----IHGTNKPHSIGSFASHGCIRMHNRHVEQLYDWVKVGTK 144 Query: 173 GN 174 Sbjct: 145 VY 146 >gi|88811972|ref|ZP_01127225.1| hypothetical protein NB231_06266 [Nitrococcus mobilis Nb-231] gi|88790856|gb|EAR21970.1| hypothetical protein NB231_06266 [Nitrococcus mobilis Nb-231] Length = 186 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 51/163 (31%), Gaps = 47/163 (28%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 + I + + E+ + + L++ I G P GDE P G Y Sbjct: 23 VRADSRVWVLIDTHRDRAEVLR----GDQPLVRFPNISWGRGGVAPVHTAGDETTPLGHY 78 Query: 106 YIGWNNLNPNSKYFLSINIGFPNE--FDKAHNRTG-----------ADLMIHGE------ 146 I + +S++ + + + +P D+A R G + HG+ Sbjct: 79 RITR--IKYHSRFHVFLELNYPTLTHLDRAF-RDGIVDTMTYQDLLNYALAHGQLPQATE 135 Query: 147 ---------------------CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ + Q+ + V+ Sbjct: 136 LGGHIGIHGLGRADPAMHARFHWTQGCIALTDNQIDRLLDYVQ 178 >gi|224825430|ref|ZP_03698535.1| ErfK/YbiS/YcfS/YnhG [Lutiella nitroferrum 2002] gi|224602351|gb|EEG08529.1| ErfK/YbiS/YcfS/YnhG [Lutiella nitroferrum 2002] Length = 183 Score = 58.8 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 44/167 (26%), Gaps = 47/167 (28%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGF 104 T I + L +++ + L+ + I G P GD P G Sbjct: 20 THAGTERWIEVDTAARTLTVYQGS-----RPLQRFDNISVGRGGVAPLHYHGDGSTPLGS 74 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT--------------------------- 137 ++I + + +P Sbjct: 75 FHIMRIRTPHV--FGSFYQLDYPRPEHAEQAFLDGRIDAGTRDDILLAARAGRLPPQFTA 132 Query: 138 -GADLMIHGE-----------CASAGCYAMNNKQMQEIYAIVRDSLR 172 G + IHG + GC A++N Q+ + + R +R Sbjct: 133 LGGAIGIHGVGRGSYRIHRDFNWTNGCVALSNAQLHQFASWARLGMR 179 >gi|260892380|ref|YP_003238477.1| ErfK/YbiS/YcfS/YnhG family protein [Ammonifex degensii KC4] gi|260864521|gb|ACX51627.1| ErfK/YbiS/YcfS/YnhG family protein [Ammonifex degensii KC4] Length = 206 Score = 58.8 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 62/211 (29%), Gaps = 58/211 (27%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 + + + L ++ + L+K Y + P G + + Sbjct: 21 NSSLFLVVDTWQCRLLVFSED-----RLVKVYPVAVGKAET---------PTPVGNWSVT 66 Query: 109 WNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGE--CASAG------CYAMNNKQ 159 +N S + I + P G +HG S G C M N+ Sbjct: 67 RKAMNWGSGFGTRWIGLDVP------WGIYG----LHGTNKPWSIGRTESQGCIRMFNRD 116 Query: 160 MQEIYAIVRDS---------LRG-----NMQSHIQIQAFPFRMTSKNMQLYQNNPNYS-- 203 ++E+Y VR LRG + M + + Q + Sbjct: 117 IEELYPRVRPGTPVIVVGKILRGPRVLREGDCGSDV------MEVQRVLRRQGFYSGPIS 170 Query: 204 --FWNMLKLGHDYFEKNHQEPFIQ-IINKQY 231 F K F+++H+ P + + K Y Sbjct: 171 GRFDAQTKEAVRRFQQHHRLPSLGEVDEKTY 201 >gi|167747918|ref|ZP_02420045.1| hypothetical protein ANACAC_02648 [Anaerostipes caccae DSM 14662] gi|167652649|gb|EDR96778.1| hypothetical protein ANACAC_02648 [Anaerostipes caccae DSM 14662] Length = 226 Score = 58.8 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 30/228 (13%), Positives = 70/228 (30%), Gaps = 64/228 (28%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + + + + + + +L + + S+ I + + IF Sbjct: 1 MVKKRWMAIVLMAVLIWNMAGT-NLETRTAYAASKQTIWQKKFSQYRYNKSVNQLIFVKY 59 Query: 58 --KNENILEIWKRNVDAEYVLLKEYKICAWS-GTFG-PKIETGDEQAPEGFYYIGW---- 109 K++ + ++++ +LK C G G K GD + P G + Sbjct: 60 KKKSKATVYMYQKRDHKWKRILK----CKGYVGKKGIHKKREGDLKTPSGTFGFTGAFGI 115 Query: 110 ------------------------------------------NNLNPNSKYFLSINIGFP 127 + ++ Y+ + + + Sbjct: 116 KKNPGAKMNYTRVNKYLYWCGDKKYYNRLIDVRKKKHRCRGEHLIDYKPHYYYGMFLNY- 174 Query: 128 NEFDKAHNRTGADLMIH---GECASAGCYAMNNKQMQEIYAIVRDSLR 172 N K + G+ + +H + +AGC A++ K M++I R Sbjct: 175 NP--KHKYKKGSAIFLHCKGKKPYTAGCIAVSRKNMKKIIKNAESGAR 220 >gi|121996921|ref|YP_001001708.1| ErfK/YbiS/YcfS/YnhG [Halorhodospira halophila SL1] gi|121588326|gb|ABM60906.1| ErfK/YbiS/YcfS/YnhG [Halorhodospira halophila SL1] Length = 195 Score = 58.8 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 42/144 (29%), Gaps = 42/144 (29%) Query: 64 EIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 E ++ V ++ GD P G + I +N S+Y L + Sbjct: 45 EAYRMTVFEGERPFAHFENPAVGRYGTAETRRRGDRTTPLGKFRINR--INEQSEYHLFL 102 Query: 123 NIGFPNEFDKAHNR-TG-------------------------------------ADLMIH 144 + +P+ + R G D+ H Sbjct: 103 GLDYPSLENARKARDAGTINQEEYLEFLDDFARLGRPPQGTALGGHIGIHGVGDGDVQFH 162 Query: 145 -GECASAGCYAMNNKQMQEIYAIV 167 + GC A+ + Q++ + ++V Sbjct: 163 RNVNWTDGCVALEDDQIEALASLV 186 >gi|282856102|ref|ZP_06265386.1| ErfK/YbiS/YcfS/YnhG family [Pyramidobacter piscolens W5455] gi|282586029|gb|EFB91313.1| ErfK/YbiS/YcfS/YnhG family [Pyramidobacter piscolens W5455] Length = 267 Score = 58.8 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 22/133 (16%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG----- 108 I I K L + + N ++ + + G K + GD + PEG + + Sbjct: 106 IYIDKAGFRLYLAEGN-----KVIDSWGVALGK-VTGNKAKAGDMRTPEGNFSVQQIQDA 159 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTG-ADLMIHGEC--------ASAGCYAMNNKQ 159 + + I + F + +TG + IHG AS GC M N+ Sbjct: 160 SSWTHDFKDGKGVIKNAYGPWFIRL--KTGWKGIGIHGTHDPDSIGTLASEGCIRMRNED 217 Query: 160 MQEIYAIVRDSLR 172 +Q++ +V ++ Sbjct: 218 LQKLKPLVAKGMK 230 >gi|304403864|ref|ZP_07385526.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus YK9] gi|304346842|gb|EFM12674.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus YK9] Length = 469 Score = 58.8 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 35/146 (23%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 Q K + P I + K+ + L + + VL++ YKI G + P Sbjct: 316 QSKLSLSNEPLRIIVDKSVHRLAVVSGD-----VLVRSYKIGLGGG-----------RTP 359 Query: 102 EGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM--IHGECA--------SAG 151 EG + I NPN + + T ++ IHG S G Sbjct: 360 EGEFNISEKVENPNGRSDGPFG---------SRGMTLSNTRYAIHGTDEPQSLGGDESLG 410 Query: 152 CYAMNNKQMQEIYAIVRDSLRGNMQS 177 C M+ + ++E+Y +V R +Q Sbjct: 411 CIRMSREDVEELYDLVPLGTRVTIQK 436 >gi|114320736|ref|YP_742419.1| ErfK/YbiS/YcfS/YnhG [Alkalilimnicola ehrlichii MLHE-1] gi|114227130|gb|ABI56929.1| ErfK/YbiS/YcfS/YnhG [Alkalilimnicola ehrlichii MLHE-1] Length = 187 Score = 58.4 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 46/161 (28%), Gaps = 47/161 (29%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY-KICAWSGTFGPKIETGDEQAPEGFY 105 + + L +++ + ++ + +I P G + P G + Sbjct: 25 RYNGEIWLEVDAETARLTVYQGH-----RPVQVFERISVGRAGTAPFRYRGSNRTPSGEF 79 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHN-RTGA-----------DLMIHGEC------ 147 I ++ +S++ + + + +P +G L H Sbjct: 80 RINR--ISHDSRFHIFLGLDYPTPRHAREALESGLFDEDDYRAYHEHLRRHRTPPQDTAL 137 Query: 148 ---------------------ASAGCYAMNNKQMQEIYAIV 167 + GC A+ N++++ + V Sbjct: 138 GGHIGIHGIGDGDPEIHDRFHWTQGCVAVTNEEIEALVEWV 178 >gi|284047661|ref|YP_003398000.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM 20731] gi|283951882|gb|ADB46685.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM 20731] Length = 205 Score = 58.4 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 24/147 (16%) Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103 ++T H + I K E L + + ++ + G K +GD + PEG Sbjct: 60 RQTPEPHDYALLIKKGEFTLYLLDHG-----EPVAKWPVALGKNP-GQKQVSGDMKTPEG 113 Query: 104 FYYIGWNN--LNPNSKYF---LSINIGFPNEFDKAHNR---TG--ADLMIHGEC------ 147 + + + + + I + F R G + IHG Sbjct: 114 TFPVDEIIDASSWSHDFHDGKGVIQHAYGPWFISLDTRNLSKGKWDGIGIHGTHDPASIG 173 Query: 148 --ASAGCYAMNNKQMQEIYAIVRDSLR 172 AS GC + N +Q++ V+ ++ Sbjct: 174 TRASEGCIRLENGNLQKLKPYVKVGMK 200 >gi|288574492|ref|ZP_06392849.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570233|gb|EFC91790.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 135 Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 15/112 (13%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI----GWNNLNPNSKYFLSINIGFPNEF 130 L + + G K + GD + PEG + + + P +G+ F Sbjct: 20 RLFGCWPVATGRN-IGQKRKVGDMRTPEGLFPVQSVHDASYWQPYRDKKTGDTVGYGPWF 78 Query: 131 DKAHNRTGADLMIH----------GECASAGCYAMNNKQMQEIYAIVRDSLR 172 + + + IH G AS GC M N+ + I +VR + Sbjct: 79 IRLKTPPWSGIGIHGTDEGHLSEIGTDASHGCIRMKNEDLLRIKEVVRPGQK 130 >gi|304313392|ref|YP_003812990.1| hypothetical protein HDN1F_37850 [gamma proteobacterium HdN1] gi|301799125|emb|CBL47368.1| Hypothetical protein HDN1F_37850 [gamma proteobacterium HdN1] Length = 248 Score = 58.0 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 67/223 (30%), Gaps = 67/223 (30%) Query: 5 YNILLFALFIFLNGC-------HHSRSLIDKAEHPL-----------SENLIISMQKKRT 46 + L F + +FL+ S + P+ + + + + Sbjct: 24 FAALAFLIALFLSNSIRAEVQFTTSIRYTPQTPPPVQHTDAAQSSTPPQTSQQAPEAQPL 83 Query: 47 SPFHP--TVIRIFKNENILEIWKRNVDAEYVLLKEYK-ICAWSGTFGPKIETGDEQAPEG 103 P + + + L + + +K + + P GD P G Sbjct: 84 PWVSPHQRWLLVDASSQTLSVMRGAQA-----VKRFDNVSLGRRGTQPIHYQGDTSTPLG 138 Query: 104 FYYIGWNNLNPNSKYFLSINIGFPNE-----------------FDKAHN---------RT 137 YI ++ +S Y L ++ +P D + RT Sbjct: 139 EMYID--DIRKSSNYTLFFSLNYPTAKHALIALKAGKITTLDYLDIFNAEREGRKPPYRT 196 Query: 138 --GADLMIHGE-----------CASAGCYAMNNKQMQEIYAIV 167 G ++ IHG + GC A++N+Q++ + V Sbjct: 197 PLGGEIGIHGLGHAKQEMHREFNWTRGCVALDNQQIRTLAHYV 239 >gi|30249996|ref|NP_842066.1| hypothetical protein NE2056 [Nitrosomonas europaea ATCC 19718] gi|30139103|emb|CAD85967.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 182 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 44/161 (27%), Gaps = 45/161 (27%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 I I E L + + + L I GD Q P G + Sbjct: 20 YANSDIWILIDTLEQRLSVMRGDKAQ----LAFNNIAIGRYGASSSRMKGDNQTPLGSFQ 75 Query: 107 IGWNNLNPNSKYFLSINIGFPN--EFDKAHNRT--------------------------- 137 I W + + +Y+ + FPN D A Sbjct: 76 ISW--IKQHHRYYRFFGVDFPNQEAADLALAEKRISRQAWLSITKAIESSRLPPQDTPLG 133 Query: 138 ---------GADLMIHGE-CASAGCYAMNNKQMQEIYAIVR 168 D +H + GC A+ N Q+ E+ + ++ Sbjct: 134 GYIGIHGIGRGDRTVHARFNWTNGCVALTNAQIDELSSWIK 174 >gi|295696513|ref|YP_003589751.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912] gi|295412115|gb|ADG06607.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912] Length = 216 Score = 57.6 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 33/129 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 P I + + + L +++ + +++Y + D P G + + Sbjct: 29 GPPMRIEVDTDAHRLTVYRDGIA-----IRQYPVALGRP---------DSPTPIGHWKVI 74 Query: 109 WNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQ 159 N + + + P G IHG ASAGC M N+ Sbjct: 75 NKYKNWGGGFGTRWLGLNVP------WGIYG----IHGTNRPHSIGWSASAGCIRMRNQD 124 Query: 160 MQEIYAIVR 168 ++E+Y ++R Sbjct: 125 VEELYEMIR 133 >gi|256839836|ref|ZP_05545345.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298375594|ref|ZP_06985551.1| ErfK/YbiS/YcfS/YnhG superfamily [Bacteroides sp. 3_1_19] gi|256738766|gb|EEU52091.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298268094|gb|EFI09750.1| ErfK/YbiS/YcfS/YnhG superfamily [Bacteroides sp. 3_1_19] Length = 167 Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 + +++ + + + K + + + D L + I +G K + Sbjct: 2 PMATLRAQEEKADGTNRVIVSKQDMRITVLCPQGDT----LAVFPIACGRN-YGDKQQEW 56 Query: 97 DEQAPEGFYYI----GWNNLNPNS---------KYFLSINIGFPNEFDKAHNRTGADLMI 143 D + PEG + I + +S + P TG + I Sbjct: 57 DFRTPEGHFVIESVEDTSLWPRDSTRQETPGEIYGPRFFRLKTP-------GFTG--IGI 107 Query: 144 HGECA--------SAGCYAMNNKQMQEIYAIV 167 HG + GC ++N+ ++ +V Sbjct: 108 HGTANPQVIPGRITMGCIRLSNEDLKAFSRLV 139 >gi|150007649|ref|YP_001302392.1| hypothetical protein BDI_1004 [Parabacteroides distasonis ATCC 8503] gi|149936073|gb|ABR42770.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 167 Score = 57.2 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 35/152 (23%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 + +++ + + + K + + + D L + I +G K + Sbjct: 2 PMATLRAQEEKADGTNRVIVSKQDMRITVLCPQGDT----LAVFPIACGRN-YGDKQQEW 56 Query: 97 DEQAPEGFYYI----GWNNLNPNS---------KYFLSINIGFPNEFDKAHNRTGADLMI 143 D + PEG + I + +S + P TG + I Sbjct: 57 DFRTPEGHFVIESVEDTSLWPRDSTRQETPGEIYGPRFFRLKTP-------GFTG--IGI 107 Query: 144 HGECA--------SAGCYAMNNKQMQEIYAIV 167 HG + GC ++N+ ++ +V Sbjct: 108 HGTANPQVIPGRITMGCIRLSNEDLKAFSRLV 139 >gi|295694715|ref|YP_003587953.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912] gi|295410317|gb|ADG04809.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912] Length = 276 Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 49/146 (33%), Gaps = 34/146 (23%) Query: 33 LSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 + +++ ++ I I +L +++R+ L++ + + P Sbjct: 63 VGPATWVALGIEQVEWGGGQFHIAIDTERRVLSLFQRD-----RLIRSFPVAVGK-PTTP 116 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLS-INIGFPNEFDKAHNRTGADLMIHGECA-- 148 P G + I NP + + + + PN G + HG Sbjct: 117 --------TPVGDWVIVEKIANPGGPFGAAWMRLSVPN--------GGYGI--HGTNNPG 158 Query: 149 ------SAGCYAMNNKQMQEIYAIVR 168 S GC M+N+ + ++Y V Sbjct: 159 SVGRAVSHGCVRMHNEDVIQVYQTVP 184 >gi|114567403|ref|YP_754557.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338338|gb|ABI69186.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 332 Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 33/141 (23%) Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100 +Q +I I L + + L+KEY + Sbjct: 132 LQGDSQDKRGRLLIEIDVASRKLVL-----TEDGKLVKEYPVAVGKSKT---------PT 177 Query: 101 PEGFYYIGWNNLNP-NSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAG 151 P G + + LN N + + P G IHG S G Sbjct: 178 PLGEWKVVHKGLNWGNGFGTRWMGLNVP------WGIYG----IHGTNKPGSIGSYASHG 227 Query: 152 CYAMNNKQMQEIYAIVRDSLR 172 C M N+ ++E+Y +V R Sbjct: 228 CIRMFNRHVEELYPLVPAGTR 248 >gi|255013825|ref|ZP_05285951.1| hypothetical protein B2_07952 [Bacteroides sp. 2_1_7] Length = 165 Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 35/151 (23%) Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 + +++ + + + K + + + D L + I +G K + D Sbjct: 1 MATLRAQEEKADGTNRVIVSKQDMRITVLCPQGDT----LAVFPIACGRN-YGDKQQEWD 55 Query: 98 EQAPEGFYYI----GWNNLNPNS---------KYFLSINIGFPNEFDKAHNRTGADLMIH 144 + PEG + I + +S + P TG + IH Sbjct: 56 FRTPEGHFVIESVEDTSLWPRDSTRQETPGEIYGPRFFRLKTP-------GFTG--IGIH 106 Query: 145 GECA--------SAGCYAMNNKQMQEIYAIV 167 G + GC ++N+ ++ +V Sbjct: 107 GTANPQVIPGRITMGCIRLSNEDLKAFSRLV 137 >gi|150017149|ref|YP_001309403.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium beijerinckii NCIMB 8052] gi|149903614|gb|ABR34447.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium beijerinckii NCIMB 8052] Length = 230 Score = 56.8 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 51/179 (28%), Gaps = 43/179 (24%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R I L I +S AE + I + +E Sbjct: 1 MKRRRFIRNTILLIIFVFILNSLRYAVNAES-------------KIHSNSNISILVDISE 47 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L + + ++LK+Y I + +P G + + Sbjct: 48 ERLYLIDTEKN---IILKKYTIASGKQET---------PSPVGTWKVVRMAKWSGGFGTR 95 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171 I + P G IHG S GC M NK ++E+Y V+ + Sbjct: 96 WIGLNVP------WGIYG----IHGTNKPYSIGSEASHGCIRMRNKDIEELYEYVKRGM 144 >gi|121535699|ref|ZP_01667503.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans Nor1] gi|121305730|gb|EAX46668.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans Nor1] Length = 238 Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 45/132 (34%), Gaps = 33/132 (25%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 T+P I I E ILE++ L K+Y++ P G + Sbjct: 50 TAPTGTVSIIIKVPERILEVYNDG-----QLYKKYRVAVGKSKT---------PTPVGEW 95 Query: 106 YIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMN 156 + W + N S + + + P G IHG S GC M Sbjct: 96 KVVWKDYNWGSGFGTRWMGLNVP------WGVYG----IHGTNNPWSIGRFASHGCIRMR 145 Query: 157 NKQMQEIYAIVR 168 NK ++E++ V Sbjct: 146 NKDVEELFEWVP 157 >gi|317132365|ref|YP_004091679.1| ErfK/YbiS/YcfS/YnhG family protein [Ethanoligenens harbinense YUAN-3] gi|315470344|gb|ADU26948.1| ErfK/YbiS/YcfS/YnhG family protein [Ethanoligenens harbinense YUAN-3] Length = 235 Score = 56.1 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 32/144 (22%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 + + + + +P +I I EN L ++K L + Y Sbjct: 26 VQHAFQANGMRASATSPNPYMILIQVQENRLSLFKNG-----KLYRSYSCATGKE----- 75 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE------ 146 D +P G + I + + P G IHG Sbjct: 76 ----DTPSPCGTFQINRKARWGEGFGGYFLGLNCP------WGNYG----IHGTTRPDSV 121 Query: 147 --CASAGCYAMNNKQMQEIYAIVR 168 +S GC+ M K ++ +Y++V Sbjct: 122 GQPSSHGCFRMYGKDIRALYSLVP 145 >gi|226314511|ref|YP_002774407.1| hypothetical protein BBR47_49260 [Brevibacillus brevis NBRC 100599] gi|226097461|dbj|BAH45903.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 237 Score = 55.7 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 44/185 (23%) Query: 1 MTNR---YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV-IRI 56 M NR + ++ FA + L ++ E + + ++ + I + Sbjct: 1 MVNRTITHLLICFAAILLL-------TVSFPVEIEIGQKIVYAEHSLPIISDQGIFTIEV 53 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN- 115 + ++ L + K +K Y + P P G Y + + + Sbjct: 54 YPRKHKLIVKKHG-----KTIKTYPVAVG-NPSTP--------TPVGEYKVIYKGKDWGP 99 Query: 116 SKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 S + + P G IHG S GC M N + E++ ++ Sbjct: 100 SFGPRWLGLNVP------WGIYG----IHGTNKPYSIGQHLSHGCIRMRNNDVIELFKMI 149 Query: 168 RDSLR 172 + Sbjct: 150 PLGTK 154 >gi|91201948|emb|CAJ75008.1| hypothetical protein kuste4246 [Candidatus Kuenenia stuttgartiensis] Length = 314 Score = 55.7 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 35/132 (26%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K+E L + + +K+Y+I + PEG + + N Sbjct: 190 ILISKSEFTLTVLLND-----RYVKQYRIGTGKND----------KTPEGTFEVKNKMKN 234 Query: 114 PNSKYFLSINIGFPNEFDKAHNR----------TGADLMIHGEC--------ASAGCYAM 155 P + +E + R G + HG +S GC M Sbjct: 235 PTWYSPYGGVYSYGDEKNILGTRWIGFKEKENLAGFGI--HGTTMPETIGTASSDGCIRM 292 Query: 156 NNKQMQEIYAIV 167 N ++E++ V Sbjct: 293 KNSDVEEVFDFV 304 >gi|52080005|ref|YP_078796.1| peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC 14580] gi|52785379|ref|YP_091208.1| YkuD [Bacillus licheniformis ATCC 14580] gi|319646218|ref|ZP_08000448.1| spore protein ykuD [Bacillus sp. BT1B_CT2] gi|81385713|sp|Q65K99|YKUD_BACLD RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore protein YkuD homolog gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC 14580] gi|52347881|gb|AAU40515.1| YkuD [Bacillus licheniformis ATCC 14580] gi|317391968|gb|EFV72765.1| spore protein ykuD [Bacillus sp. BT1B_CT2] Length = 165 Score = 55.3 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + N L +++R+ L+K Y I KI T Q P G + I Sbjct: 56 PYRIAVSLNGRTLRLYERD-----RLVKTYPIAVG------KILT---QTPRGEFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC M+N+ + E Sbjct: 102 QPNPGGPF-GAYWLS------LSKQHYG----IHGTNNPSSIGKAVSRGCIRMHNRDVLE 150 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 151 LASIVPNGTR 160 >gi|148381127|ref|YP_001255668.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. ATCC 3502] gi|153930963|ref|YP_001385502.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. ATCC 19397] gi|153934739|ref|YP_001388908.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. Hall] gi|148290611|emb|CAL84740.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 3502] gi|152927007|gb|ABS32507.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. ATCC 19397] gi|152930653|gb|ABS36152.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. Hall] Length = 231 Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I N +++++ ++K Y I + +P G + I Sbjct: 39 NSNICILIDITANNMDVYRNG-----EIIKSYSIATGKSST---------PSPIGTWKIT 84 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM 160 +S + + P + G IHG +S GC M NK + Sbjct: 85 NKGTWGSSFGGRWMGLNVP------WGKYG----IHGTNAPNSIGWSSSHGCIRMKNKNV 134 Query: 161 QEIYAI 166 E+Y I Sbjct: 135 AELYKI 140 >gi|296329732|ref|ZP_06872217.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674129|ref|YP_003865801.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153230|gb|EFG94094.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412373|gb|ADM37492.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii str. W23] Length = 167 Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + L +++ N ++K Y I KI T Q P G +YI Sbjct: 58 PYHIAVSIGAKTLTLYQNN-----QVIKTYPIAVG------KILT---QTPIGEFYIINR 103 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC M+NK + E Sbjct: 104 QRNPGGPF-GAYWLS------LSRQHYG----IHGTNNPSSIGKAVSKGCVRMHNKDVIE 152 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 153 LASIVPNGTR 162 >gi|158321448|ref|YP_001513955.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus oremlandii OhILAs] gi|158141647|gb|ABW19959.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus oremlandii OhILAs] Length = 254 Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 32/130 (24%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 + + I +E L + N L+K Y + D P G + Sbjct: 59 PEYEDIRVLIDISEKRLYLMNGND-----LVKIYPVATGKL---------DTPTPIGTWK 104 Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158 + + + P G IHG SAGC MNN Sbjct: 105 VVHKAKWGGGFGTRWMGLNVP------WGTYG----IHGTNKPNSIGSNASAGCVRMNNT 154 Query: 159 QMQEIYAIVR 168 ++++Y V+ Sbjct: 155 DVEDLYKYVK 164 >gi|291514044|emb|CBK63254.1| Uncharacterized protein conserved in bacteria [Alistipes shahii WAL 8301] Length = 152 Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 19/109 (17%) Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-----WNNLNPNSKYFLSINIGFPNEF 130 L Y I G K + GD + PEG + + + I + + F Sbjct: 12 LRAVYPIACGRA-LGNKEKPGDMKTPEGLFSVQQIQDASAWTHDFGDGKGEIRGAYGSHF 70 Query: 131 DKAHNRTGA-DLMIHGEC--------ASAGCYAMNNKQMQEI---YAIV 167 + G + IHG A+ GC +NN + E+ Y V Sbjct: 71 IRLKT-PGHCGIGIHGTHDPASIGTRATEGCVRLNNSDLLELVKKYVYV 118 >gi|323140901|ref|ZP_08075814.1| ErfK/YbiS/YcfS/YnhG [Phascolarctobacterium sp. YIT 12067] gi|322414639|gb|EFY05445.1| ErfK/YbiS/YcfS/YnhG [Phascolarctobacterium sp. YIT 12067] Length = 197 Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 66/207 (31%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + L+F++ + L+ + + +I I K Sbjct: 1 MLKKLLGLIFSVCLLLSCSLAAAAPASALFG-----------------NARYLICIHKQS 43 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L+++++ + Y I G K TGD + P W + Y+ Sbjct: 44 YRLDVYQQ---GVEQAVCSYPIAVAKNP-GDKQYTGDNRTPT-----SWGSAAAIPSYYT 94 Query: 121 SINIGFPNE----------------FDKAHNR---------------TGA-DLMIHGEC- 147 +G P+ D + + TG + IHG Sbjct: 95 GAAVGVPSAQVPFRIEEICPAHYWTHDFSDGKGVIEGAYGPWFLSLDTGWIGIGIHGTHD 154 Query: 148 -------ASAGCYAMNNKQMQEIYAIV 167 AS GC + N +Q + +V Sbjct: 155 PASIGTMASEGCIRLRNADIQSLKELV 181 >gi|296133608|ref|YP_003640855.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR] gi|296032186|gb|ADG82954.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR] Length = 318 Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 46/151 (30%), Gaps = 41/151 (27%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P + + L ++ + + K Y++ P G + I Sbjct: 128 PKGEVRLEVHIKTRTLIVYDDD-----KVFKTYRVAVGKNKT---------PTPVGEWRI 173 Query: 108 GWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158 N + + + + P G IHG S GC M N+ Sbjct: 174 VRKAKNWGTGFGTRWLGLSVP------WGLFG----IHGTNKPWSIGSKASHGCIRMFNR 223 Query: 159 QMQEIYAIVRDSLRGNMQSHIQI--QAFPFR 187 ++E+Y V+ + + + Q FP R Sbjct: 224 DVEELYEWVKLG------TRVTVIGQVFPVR 248 >gi|312876406|ref|ZP_07736390.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796764|gb|EFR13109.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor lactoaceticus 6A] Length = 190 Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 41/171 (23%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 +P +I + +++ L ++K + L K Y I P P G + I Sbjct: 32 NPYLIYVSIDDSRLYVFKEGI-----LYKSYPISPGK-PSTP--------TPVGTFKIIS 77 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQ 161 + + + + + G IHG S GC M NK ++ Sbjct: 78 KDYWGEGFGGRWMGLN------VRYGKYG----IHGTIYESYIGAHVSKGCVRMLNKDVK 127 Query: 162 EIYAI--------VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 E+++ V + L G ++ + +P M + + F Sbjct: 128 ELFSYIPIGTTVIVSEGLYGEFRNGFRT-IYPGDTGEDVMAVQRRLQELGF 177 >gi|332982349|ref|YP_004463790.1| ErfK/YbiS/YcfS/YnhG family protein [Mahella australiensis 50-1 BON] gi|332700027|gb|AEE96968.1| ErfK/YbiS/YcfS/YnhG family protein [Mahella australiensis 50-1 BON] Length = 266 Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 37/133 (27%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP--EGF 104 P I I +N+L + K N ++K+Y + G + P G Sbjct: 71 PPGDGQQIFIDLEDNVLYLLKDN-----KVMKKYPVA-----------EGKYKTPSPIGA 114 Query: 105 YYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAM 155 + I + S + + + P G IHG +S GC+ M Sbjct: 115 WQIVSKRTDWGSGFGTRWLGLNVP------WGVYG----IHGTNKPDSVGWSSSHGCFRM 164 Query: 156 NNKQMQEIYAIVR 168 NK ++E++ +V+ Sbjct: 165 QNKHVEELFDLVK 177 >gi|260593415|ref|ZP_05858873.1| ErfK/YbiS/YcfS/YnhG family protein [Prevotella veroralis F0319] gi|260534691|gb|EEX17308.1| ErfK/YbiS/YcfS/YnhG family protein [Prevotella veroralis F0319] Length = 253 Score = 54.1 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 41/199 (20%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPT----------- 52 R +LF++ L+ + + + E ++ K T Sbjct: 5 RKIFILFSVAFCLS---IEAQTLPYSPDNICEKQVVVHGLKTTRAPADISISLGAENKNN 61 Query: 53 -VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP-----EGFYY 106 I I K + L ++++ +D VL+ Y C ++ G K GD + P + Sbjct: 62 CFIVISKKDYYLYVYEKRLDDT-VLVARYDAC-FAVNRGNKTRIGDMRTPHCTPSIPSFS 119 Query: 107 IG-----WNNLNPNSKYFLSINIGFPNEFDKAHNRTGA-DLMIHGECA---------SAG 151 I + + +I + + F + + TG + IHG S G Sbjct: 120 ISQICNAASWKHDFRDGRGNI-LAYGPYFLRLNIGTGNRSIGIHGSTNNRESVPGLASEG 178 Query: 152 CYAMNNKQMQEI---YAIV 167 C + ++ ++++ YA V Sbjct: 179 CIRLKDEDVRDLRNRYAFV 197 >gi|158334425|ref|YP_001515597.1| hypothetical protein AM1_1246 [Acaryochloris marina MBIC11017] gi|158304666|gb|ABW26283.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 180 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 57/179 (31%), Gaps = 33/179 (18%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEI 65 I L + L R++ + A P + ++ P + + ++ + + Sbjct: 8 LIALSVVAGALALGQPVRAVEEIAIAPPLPG-LDNVTDHLPPAVDPMRLELNLSKRRVTV 66 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN----SKYFLS 121 ++ + +K Y + P G + + NP K ++ Sbjct: 67 YQHDQA-----VKSYPVAIGRAG---------WATPAGDFEVKTKYRNPPWLHPFKGYV- 111 Query: 122 INIGFP-NEFDKAH----NRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 I G P N + + HG S GC M ++ ++E+Y +V Sbjct: 112 IPGGDPENPLGRRWMGFWTDGNNWIGFHGTPNRDSVGRSASHGCVRMYDEDIEEMYELV 170 >gi|297197389|ref|ZP_06914786.1| lipoprotein [Streptomyces sviceus ATCC 29083] gi|297146702|gb|EFH28291.1| lipoprotein [Streptomyces sviceus ATCC 29083] Length = 247 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 65/226 (28%), Gaps = 65/226 (28%) Query: 1 MTNRYNILLFALFIFLNGCHH---------SRSLIDKAEHPLSENLIISMQKKRTSPFHP 51 +T R ++ L A +FL+GC + + P S + + + ++ P Sbjct: 2 ITRRTHVALLAASLFLSGCGGGAVASTESAPPPSREPSRTPASPEISVEVAPQQIPGLGP 61 Query: 52 -----------TVIRIFKNEN-----ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95 + + + +++R + + + Sbjct: 62 RTRAKIPADARQAVVVTGRGRDSPVSTVVLYERTAAG-WRAGASWPAHNALKGWSDHHLA 120 Query: 96 GDEQAPEGFYYI--------GWNNLNPNSKYFLS-------------------INIGF-- 126 GD ++P G Y + P + I I + Sbjct: 121 GDLRSPIGVYTLTDAGGLLKDPGTKLPYDRGVGFTSPGTGFEGEPLAGSFDYVIAINYNR 180 Query: 127 -----PNEFDKAHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163 P ++ + G + + HG + GC ++ K M+E+ Sbjct: 181 QPGTSPLDWTRPLGAGRGGGIWLHVDHGGP-THGCVSIAEKHMKEL 225 >gi|227872445|ref|ZP_03990787.1| LamB/YcsF family protein [Oribacterium sinus F0268] gi|227841705|gb|EEJ51993.1| LamB/YcsF family protein [Oribacterium sinus F0268] Length = 253 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 64/227 (28%), Gaps = 68/227 (29%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV-IRIFKNE--- 60 + LF L + L K L S + K E Sbjct: 21 LILSLFCLSMIFTAFAGPGELYQK---KLESQTSTSNNDTEIRIGKKLFQTEVGKKEDQL 77 Query: 61 -----NILEIWKRNVDAEYVLLKEYKICAWSGTFGPK----IETGDEQAPEGFYYIG--- 108 + L +W + D Y+ K Y G G K + GD P G Y I Sbjct: 78 LVMLDHELSLWNKGEDRYYLQWKTYS---GYGRNGLKEGTERKEGDGTTPLGAYPISFAF 134 Query: 109 -----------WNNLNPNSK-----------------------------YFLSINIGFPN 128 + + S Y ++ IGF N Sbjct: 135 GFPSSVNTKLPYKQIQKTSYWSGEKNTYNTWVESPTKIAGERLYSYKICYEKALAIGF-N 193 Query: 129 EFDKAHNRTGADLMIH----GECASAGCYAMNNKQMQEIYAIVRDSL 171 + R G+ + +H S+GC + + M+++ ++++ L Sbjct: 194 QNPVVFGR-GSAIFLHIKAPDTWESSGCITIEKQAMEDLLPLLKEKL 239 >gi|325981386|ref|YP_004293788.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212] gi|325530905|gb|ADZ25626.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212] Length = 178 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 41/106 (38%) Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN-----------EFD----------KAHN 135 D++ P G + +GW +N S+Y+ + +PN D K+ Sbjct: 62 DDKTPLGRFKVGW--VNEKSRYYRFFGLDYPNLDTAKRALEENRIDEETWLSIKQAKSRG 119 Query: 136 RTGADLMI------------------HGECASAGCYAMNNKQMQEI 163 +T + H + GC A+ N+Q+ ++ Sbjct: 120 KTPPQDTLLGGHIGIHGIGRGDQEIHHKYNWTNGCVALTNEQIDQL 165 >gi|28210382|ref|NP_781326.1| hypothetical protein CTC00656 [Clostridium tetani E88] gi|28202819|gb|AAO35263.1| conserved protein (peptidoglycan binding) [Clostridium tetani E88] Length = 232 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 54/176 (30%), Gaps = 43/176 (24%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M I+ LF+ L C P +K I + +E Sbjct: 1 MKRHNRIISTLLFLVLLIC------------PKVAKASDLNRKSIQKNKEGYNILVDISE 48 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF- 119 + + ++ + ++ Y I P +P G + I + N S + Sbjct: 49 FKMYLIEKGSN---KPIRRYPIAGGK-PETP--------SPYGTWKITSKSANWGSGFGT 96 Query: 120 LSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEIYAIV 167 + + P + G IHG S GC M NK ++E+Y V Sbjct: 97 RWMGLNVP------WGQYG----IHGTNKPLSINNPDSKGCIRMFNKDVEELYKYV 142 >gi|320162414|ref|YP_004175639.1| hypothetical protein ANT_30130 [Anaerolinea thermophila UNI-1] gi|319996268|dbj|BAJ65039.1| hypothetical protein ANT_30130 [Anaerolinea thermophila UNI-1] Length = 358 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 33/129 (25%) Query: 59 NENILEIWKRNVDAEYVLLKEY----KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 +E+W ++ L+ Y + G K GD P+G Y + Sbjct: 218 EAKRIEVWLKD-----QLVIAYENDEPVLITRAATGGKFIDGDYSTPQGRYLTNRKRPSR 272 Query: 115 NSKYFLSINIGFPNEFDKAHNRTG---------ADLMIHGECA--------SAGCYAMNN 157 + S ++ PN +D G + + HG S GC ++ Sbjct: 273 HMA---SGDLAAPNSYDL----PGVPWVCYLTESGISFHGTYWHNDFGKPRSHGCINLSP 325 Query: 158 KQMQEIYAI 166 + IY Sbjct: 326 AAARWIYRW 334 >gi|134299346|ref|YP_001112842.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1] gi|134052046|gb|ABO50017.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1] Length = 255 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 41/125 (32%), Gaps = 33/125 (26%) Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL------NPNS 116 L ++ + L+K Y + K+ PEG + I N Sbjct: 137 LYLYDQGY-----LVKIYPVATGK----EKLF-----TPEGSFKIANKLPIKNADDPENL 182 Query: 117 KYFLSINIGFPNEFDKA-----HNRTGADLMIHGEC--------ASAGCYAMNNKQMQEI 163 + + P+E DK G IHG AS GC +NN + E+ Sbjct: 183 YGPRWMGLAVPDEKDKRANNDKRAPVGHKYGIHGTNEPNSIGTHASGGCIRLNNHDILEL 242 Query: 164 YAIVR 168 Y +V Sbjct: 243 YDMVP 247 >gi|220933023|ref|YP_002509931.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168] gi|219994333|gb|ACL70936.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168] Length = 263 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 33/139 (23%) Query: 39 ISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE 98 + + I I + L ++K K Y + T Sbjct: 63 SVLAEIEIPEGEKYYIIINTYQRTLTLYKDG-----KPYKRYPVAIGKPTT--------- 108 Query: 99 QAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------S 149 ++P G + I + + + + + P G IHG S Sbjct: 109 RSPVGEWAIIGKSKDWGGGFGTRWLGLNVP------WGIYG----IHGTNKPGSIGRAAS 158 Query: 150 AGCYAMNNKQMQEIYAIVR 168 GC M N+ ++E+Y IV Sbjct: 159 HGCIRMFNRDVEELYDIVP 177 >gi|303239377|ref|ZP_07325905.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2] gi|302593163|gb|EFL62883.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2] Length = 235 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 32/127 (25%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 +I I+ +E L +++ +K+Y I + +P G + I Sbjct: 44 PQYLIVIYIDEKKLYLFENE-----ECIKKYPIASGMPG---------WPSPIGSWKIVT 89 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQ 161 + + + R G IHG AS GC M NK ++ Sbjct: 90 KDDWGEGFGGRWLGLN------VKWGRYG----IHGTSEEYTIGSAASHGCIRMFNKDIK 139 Query: 162 EIYAIVR 168 E+Y IV Sbjct: 140 ELYNIVP 146 >gi|187776901|ref|ZP_02993374.1| hypothetical protein CLOSPO_00440 [Clostridium sporogenes ATCC 15579] gi|187775560|gb|EDU39362.1| hypothetical protein CLOSPO_00440 [Clostridium sporogenes ATCC 15579] Length = 231 Score = 53.4 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 33/137 (24%) Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 M+ I I N +++++ ++K Y I + Sbjct: 29 QQKMETNPMD-NSNICILIDITANNMDVYRNG-----EVIKSYSIATGKSST-------- 74 Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CAS 149 +P G + I +S + + P + G IHG +S Sbjct: 75 -PSPIGTWKIINKGTWGSSFGGRWMGLNVP------WGKYG----IHGTDAPHSIGWNSS 123 Query: 150 AGCYAMNNKQMQEIYAI 166 GC M NK + E+Y I Sbjct: 124 HGCIRMKNKNVAELYKI 140 >gi|150392091|ref|YP_001322140.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens QYMF] gi|149951953|gb|ABR50481.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens QYMF] Length = 253 Score = 53.4 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 42/185 (22%) Query: 4 RYNILLFAL-FIFLNGCHHSRSLIDKAEHPLSENLII-----SMQKKRTSPFHPTV---- 53 R +L FA+ I G + ++ P + + + + +P Sbjct: 5 RRLLLFFAIILIGTAGVLYIKNGSLFGGIPTPGGDVRGYNEYILWEHQMLEENPNYENVK 64 Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + + L + N LLK Y I + P +P G + + Sbjct: 65 ILVDISVKKLYLLNGN-----ELLKTYTIASGK-PSTP--------SPLGSWEVIQKARW 110 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYA 165 + + I P + G IHG SAGC MNN+ ++++Y Sbjct: 111 GGAFGTRWMGINVP------WGKYG----IHGTDKPNSIGYNASAGCIRMNNRDVEDLYQ 160 Query: 166 IVRDS 170 V++ Sbjct: 161 YVKNG 165 >gi|311067920|ref|YP_003972843.1| murein transglycosylase [Bacillus atrophaeus 1942] gi|310868437|gb|ADP31912.1| murein transglycosylase [Bacillus atrophaeus 1942] Length = 168 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + + L +++ N L+K Y I KI T P G YYI Sbjct: 59 PYHIVVSISGKTLRLFQNN-----RLIKTYPIAVG------KILT---TTPTGEYYIVNR 104 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + ++ + HG S GC M NK + E Sbjct: 105 QPNPGGPF-GAYWMS--------LSKLHYGI--HGTNNPSSIGKAVSKGCIRMYNKDVVE 153 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 154 LASIVPNGTR 163 >gi|281357530|ref|ZP_06244018.1| ErfK/YbiS/YcfS/YnhG family protein [Victivallis vadensis ATCC BAA-548] gi|281316133|gb|EFB00159.1| ErfK/YbiS/YcfS/YnhG family protein [Victivallis vadensis ATCC BAA-548] Length = 422 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 26/163 (15%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 ++ + PL+ N++ ++ P P I++ K+ +L+++ L + I Sbjct: 260 DAIKISSRMPLANNILPLGKRLVIYPG-PWKIKVEKSARLLKLYNEFPAGG-RLYAVFDI 317 Query: 83 CAWSGTFGP--------KIETGDEQAPEGFYYIGWNNLNPNSKYFLSI-NIGFPNEFDKA 133 P K++ D PEG + N YFL + G P DK Sbjct: 318 GIGRLGRTPSADFVISTKLKNPDWYTPEGRVIKYGDPENMLGDYFLKLAPTGTP---DKP 374 Query: 134 HNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G + HG S GC M+N ++ +Y IV Sbjct: 375 L--LGYGI--HGTRDDASVTKSQSNGCIRMHNADVETLYRIVP 413 >gi|170755984|ref|YP_001782818.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str. Okra] gi|169121196|gb|ACA45032.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str. Okra] Length = 231 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I N +++++ ++K Y I + +P G + I Sbjct: 39 NSNICILIDITANNMDVYRNG-----EIIKSYSIATGKSST---------PSPIGTWKII 84 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM 160 +S + + P + G IHG +S GC M NK + Sbjct: 85 NKGTWGSSFGGRWMGLNVP------WGKYG----IHGTNAPNSIGWSSSHGCIRMKNKNV 134 Query: 161 QEIYAI 166 E+Y I Sbjct: 135 AELYKI 140 >gi|153938990|ref|YP_001392530.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str. Langeland] gi|152934886|gb|ABS40384.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str. Langeland] gi|295320516|gb|ADG00894.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str. 230613] Length = 231 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I N +++++ ++K Y I + +P G + I Sbjct: 39 NSNICILIDITANNMDVYRNG-----EIIKSYSIATGKSST---------PSPIGTWKII 84 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM 160 +S + + P + G IHG +S GC M NK + Sbjct: 85 NKGTWGSSFGGRWMGLNVP------WGKYG----IHGTNAPNSIGWSSSHGCIRMKNKNV 134 Query: 161 QEIYAI 166 E+Y I Sbjct: 135 AELYKI 140 >gi|168179172|ref|ZP_02613836.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC 2916] gi|226950607|ref|YP_002805698.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str. Kyoto] gi|182669937|gb|EDT81913.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC 2916] gi|226843014|gb|ACO85680.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str. Kyoto] Length = 231 Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I N +++++ ++K Y I + +P G + I Sbjct: 39 NSNICILIDITANNMDVYRNG-----EIIKSYSIATGKSST---------PSPIGTWKII 84 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM 160 +S + + P + G IHG +S GC M NK + Sbjct: 85 NKGTWGSSFGGRWMGLNVP------WGKYG----IHGTNAPNSIGWSSSHGCIRMKNKNV 134 Query: 161 QEIYAI 166 E+Y I Sbjct: 135 AELYKI 140 >gi|28275296|ref|NP_783551.1| hypothetical protein SO_4656.3 [Shewanella oneidensis MR-1] Length = 67 Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 14/45 (31%) Query: 137 TGADLMIHGE--------------CASAGCYAMNNKQMQEIYAIV 167 G +MIHG+ + GC A+ N +M EI+ V Sbjct: 13 PGGLIMIHGQHNGLGWLSFASQFFNWTNGCIAVTNSEMDEIWQAV 57 >gi|154685816|ref|YP_001420977.1| YkuD [Bacillus amyloliquefaciens FZB42] gi|154351667|gb|ABS73746.1| YkuD [Bacillus amyloliquefaciens FZB42] Length = 166 Score = 53.0 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I ++ LE+++ L++ Y I KI T P G +YI Sbjct: 57 PYSIIVYIGAKKLELYRLG-----RLIRTYPIAVG------KILT---TTPTGEFYIVNR 102 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 P + + + + G IHG S GC M N+ + E Sbjct: 103 QPKPGGPF-GAYWLS------LSKIHYG----IHGTNNPSSIGKAVSKGCIRMYNQDVTE 151 Query: 163 IYAIVRDSLR 172 + A V + R Sbjct: 152 LAATVPNGTR 161 >gi|323357749|ref|YP_004224145.1| hypothetical protein MTES_1301 [Microbacterium testaceum StLB037] gi|323274120|dbj|BAJ74265.1| uncharacterized protein conserved in bacteria [Microbacterium testaceum StLB037] Length = 252 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 22/101 (21%) Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYFLSINIGFPNEFDKAHN 135 +K Y I +G P G +++ N + + D + Sbjct: 152 VKTYPIATGTGGT---------PTPHGSFFLTELIEPTNAGYGPYAFGLS--AFSDVLTS 200 Query: 136 RTGAD--LMIHGEC--------ASAGCYAMNNKQMQEIYAI 166 G + +HG S GC M+N + E+ + Sbjct: 201 FGGGPGQIGLHGTDDESTIGQSVSHGCIRMSNADITELARL 241 >gi|187736183|ref|YP_001878295.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC BAA-835] gi|187426235|gb|ACD05514.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC BAA-835] Length = 156 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 43/158 (27%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 IRI L + K +L + + + G E G + P G + I + Sbjct: 6 IRINLPRQELVLEKSG-----KILLQCPVSSGKAGTGH--EEGSGKTPTGHFRICKKIGD 58 Query: 114 ------------PNSKYFLSINIGFPNEFD---------------KAHNRTGADLMIHGE 146 P +Y +I D A+ R+ + IHG Sbjct: 59 GEPEDTIFISRLPAGRYPTAIPKSLNEHSDFILTRILWLDGLEPHNANTRS-RYIYIHGT 117 Query: 147 --------CASAGCYAMNNKQMQEIYAIVRDSLRGNMQ 176 AS GC ++ + M ++A+ + + +Q Sbjct: 118 NDTELLGTPASHGCIRLSPRDMMALFALAEEGMDVFIQ 155 >gi|170760335|ref|YP_001788499.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str. Loch Maree] gi|169407324|gb|ACA55735.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str. Loch Maree] Length = 231 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 40/126 (31%), Gaps = 32/126 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I N +++++ ++K Y I +P G + I Sbjct: 39 NSNICILIDITANNMDVYRNG-----EIIKSYSIATGKSAT---------PSPIGTWKII 84 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM 160 +S + + P + G IHG +S GC M NK + Sbjct: 85 NKGTWGSSFGGRWMGLNVP------WGKYG----IHGTNAPNSIGWSSSHGCIRMKNKNV 134 Query: 161 QEIYAI 166 E+Y I Sbjct: 135 AELYKI 140 >gi|326202068|ref|ZP_08191938.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM 2782] gi|325987863|gb|EGD48689.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM 2782] Length = 236 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 32/140 (22%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 + S + + +I I +E L +++ + +K+Y I + Sbjct: 32 IKGSFTRHAANKQQQFLILIHIDEKTLYLFEND-----KCIKKYPIASGKPG-------- 78 Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA-------- 148 +P G + I + + + G IHG Sbjct: 79 -WPSPIGEWKIVEKSQWGKGFGGRWLGLN------VRWGNYG----IHGTKNEASIGRSA 127 Query: 149 SAGCYAMNNKQMQEIYAIVR 168 S GC M N+ ++E+Y +V Sbjct: 128 SHGCIRMYNRDIKELYDLVP 147 >gi|308173372|ref|YP_003920077.1| L,D-transpeptidase [Bacillus amyloliquefaciens DSM 7] gi|307606236|emb|CBI42607.1| L,D-transpeptidase [Bacillus amyloliquefaciens DSM 7] gi|328553699|gb|AEB24191.1| L,D-transpeptidase [Bacillus amyloliquefaciens TA208] Length = 166 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I ++ L++++ L++ Y I KI T P G +YI Sbjct: 57 PYSIVVYIGAKKLQLYRLG-----RLIRTYPIAVG------KILT---TTPTGEFYIVNR 102 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 P + + + ++ + HG S GC M+N+ + E Sbjct: 103 QPKPGGPF-GAYWLS--------LSKLHYGI--HGTNDPSSIGKAVSKGCIRMHNQDVTE 151 Query: 163 IYAIVRDSLR 172 + A V + + Sbjct: 152 LAATVPNGTK 161 >gi|153954823|ref|YP_001395588.1| hypothetical protein CKL_2205 [Clostridium kluyveri DSM 555] gi|146347681|gb|EDK34217.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] Length = 126 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 39/130 (30%), Gaps = 33/130 (25%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 SP I I + L ++K + K Y + P G + Sbjct: 14 SPNVTYSITINRAARRLTLYKNG-----KVYKTYPVAVGKSGT---------PTPAGTFR 59 Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158 I +NP Y + + + IHG S GC M NK Sbjct: 60 IINKQINPGGPYGA-----------RWMGLSAKGIGIHGTNNPHSIGSYVSNGCIRMYNK 108 Query: 159 QMQEIYAIVR 168 + E++ IV Sbjct: 109 DVIELFNIVP 118 >gi|295394274|ref|ZP_06804504.1| possible secreted protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972858|gb|EFG48703.1| possible secreted protein [Brevibacterium mcbrellneri ATCC 49030] Length = 342 Score = 52.6 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 61/187 (32%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFK------NENILEIWKRNVDAEYVLLKEYKICA-- 84 ++ ++ P I I +E+W+ D + +K Sbjct: 132 ITTGVLAYGLPHGIKPKGGRQIVIAHTSARSSKTGTVELWELRNDERWHRTHTFKDARFG 191 Query: 85 --WSGTFGPKIETGDEQAPEGFY---------------YIGWNNLNPNSKY---FLSIN- 123 T K GD + P G Y I + + N ++ S++ Sbjct: 192 YKGLATASDK-REGDGKTPMGQYRIPFTFGTKAKPKGTRIEYRRADHNDQWCSRSGSLHY 250 Query: 124 ---IGFPN----EFD---------------------KAHNRTGADLMI--HGECASAGCY 153 + PN D + R G+ + + HG+ ++AGC Sbjct: 251 NTWMSVPNRSCPAKDAEVFSTIPQYSHVAVVDYNSARKAGR-GSAIFVHKHGKGSTAGCV 309 Query: 154 AMNNKQM 160 ++ KQM Sbjct: 310 SVTGKQM 316 >gi|168183495|ref|ZP_02618159.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf] gi|237796634|ref|YP_002864186.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str. 657] gi|182673343|gb|EDT85304.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf] gi|229263482|gb|ACQ54515.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str. 657] Length = 231 Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 32/126 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I N +++++ ++K Y I + +P G + I Sbjct: 39 NSNICILIDITANNMDVYRNG-----EIVKSYSIATGKSST---------PSPIGTWKII 84 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM 160 +S + + P + G IHG +S GC M NK + Sbjct: 85 NKGTWGSSFGGRWMGLNVP------WGKYG----IHGTNAPNSIGWSSSHGCIRMKNKNV 134 Query: 161 QEIYAI 166 E+Y I Sbjct: 135 AELYKI 140 >gi|219855282|ref|YP_002472404.1| hypothetical protein CKR_1939 [Clostridium kluyveri NBRC 12016] gi|219569006|dbj|BAH06990.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 130 Score = 52.6 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 39/130 (30%), Gaps = 33/130 (25%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 SP I I + L ++K + K Y + P G + Sbjct: 18 SPNVTYSITINRAARRLTLYKNG-----KVYKTYPVAVGKSGT---------PTPAGTFR 63 Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158 I +NP Y + + + IHG S GC M NK Sbjct: 64 IINKQINPGGPYGA-----------RWMGLSAKGIGIHGTNNPHSIGSYVSNGCIRMYNK 112 Query: 159 QMQEIYAIVR 168 + E++ IV Sbjct: 113 DVIELFNIVP 122 >gi|322807493|emb|CBZ05068.1| protein erfK/srfK precursor [Clostridium botulinum H04402 065] Length = 231 Score = 52.2 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 32/125 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I N +++++ ++K Y I + +P G + I Sbjct: 39 NSNICILIDITANNMDVYRNG-----EIIKSYSIATGKSST---------PSPIGTWKII 84 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM 160 +S + + P + G IHG +S GC M NK + Sbjct: 85 NKGTWGSSFGGRWMGLNVP------WGKYG----IHGTNAPNSIGWSSSHGCIRMKNKNV 134 Query: 161 QEIYA 165 E+Y Sbjct: 135 AELYK 139 >gi|321315163|ref|YP_004207450.1| murein transglycosylase [Bacillus subtilis BSn5] gi|291483940|dbj|BAI85015.1| hypothetical protein BSNT_02352 [Bacillus subtilis subsp. natto BEST195] gi|320021437|gb|ADV96423.1| murein transglycosylase [Bacillus subtilis BSn5] Length = 167 Score = 52.2 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + L ++ N ++K Y I KI T Q P G +YI Sbjct: 58 PYHIAVSIGAKTLTLFLNN-----RVMKTYPIAVG------KILT---QTPTGEFYIINR 103 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC M+NK + E Sbjct: 104 QRNPGGPF-GAYWLS------LSKQHYG----IHGTNNPASIGKAVSKGCIRMHNKDVIE 152 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 153 LASIVPNGTR 162 >gi|312792945|ref|YP_004025868.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180085|gb|ADQ40255.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 223 Score = 51.5 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 41/171 (23%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 +P +I + +++ L ++K + L K Y I P P G + I Sbjct: 32 NPYLIYVSIDDSRLYVFKEGI-----LYKSYPISPGK-PSTP--------TPVGTFKIIS 77 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQ 161 + + + + + G IHG S GC M NK ++ Sbjct: 78 KDYWGEGFGGRWMGLN------VRYGKYG----IHGTIYESYIGAHVSKGCVRMLNKDVK 127 Query: 162 EIYAI--------VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 E+++ V + + G ++ + +P M + + F Sbjct: 128 ELFSYIPIGTTVIVSEGIYGEFRNGFRT-IYPGDTGEDVMAVQRRLKELGF 177 >gi|312621812|ref|YP_004023425.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202279|gb|ADQ45606.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor kronotskyensis 2002] Length = 223 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 41/185 (22%) Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95 ++++ +P +I + +++ L ++K + L K Y I + Sbjct: 18 TSLVTISSISNYNKNPYLIYVSIDDSKLYVFKEGI-----LYKSYPISPGKTST------ 66 Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------C 147 P G + I + + + P + + G IHG Sbjct: 67 ---PTPVGTFKIISKDYWGEGFGGRWMGLNVP------YGKYG----IHGTIYESYIGAH 113 Query: 148 ASAGCYAMNNKQMQEIYAIVR--------DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNN 199 S GC M NK ++E++ + + + G ++ + +P M + + Sbjct: 114 VSKGCIRMLNKDVKELFLYIPIGTTVVISEGIYGEFRNGFRT-IYPGDTGVDVMAVQRRL 172 Query: 200 PNYSF 204 F Sbjct: 173 KELGF 177 >gi|147676430|ref|YP_001210645.1| hypothetical protein PTH_0095 [Pelotomaculum thermopropionicum SI] gi|146272527|dbj|BAF58276.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 185 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 35/136 (25%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 + + + +I + L ++ + L+ Y + P P Sbjct: 3 ENRGRTYGSHILINL--ATRQLSYFEGS-----RLMNTYPVGVGK-PSTP--------TP 46 Query: 102 EGFYYIGWNNLNPNS-KYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGC 152 G Y I +NP + + P R G IHG S GC Sbjct: 47 TGKYSIIEKIMNPGGVLGTRWMGLSIP------GGRYG----IHGTNNPSSIGGYVSNGC 96 Query: 153 YAMNNKQMQEIYAIVR 168 M N+ ++E++A V Sbjct: 97 IRMFNEDVEELFAKVE 112 >gi|222529956|ref|YP_002573838.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor bescii DSM 6725] gi|222456803|gb|ACM61065.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor bescii DSM 6725] Length = 223 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 41/152 (26%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 +P +I + +++ L ++K + L K Y + P P G + I Sbjct: 32 NPYLIYVSIDDSRLYVFKNGI-----LYKSYPVSPGK-PSTP--------TPIGTFKIVS 77 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQ 161 + + + P + + G IHG S GC M NK ++ Sbjct: 78 KDYWGEGFGGRWMGLNVP------YGKYG----IHGTIYESYIGAHVSKGCIRMLNKDVK 127 Query: 162 EIYAIVR--------DSLRGNMQSHIQIQAFP 185 E++ + + + G ++ + +P Sbjct: 128 ELFLYIPIGTTVVISEGIYGEFRNGFRT-IYP 158 >gi|146297696|ref|YP_001181467.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411272|gb|ABP68276.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 234 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 41/171 (23%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 +P +I + +++ L ++K + L K Y I P P G + I Sbjct: 43 NPYLIFVSIDDSKLYVFKNGI-----LYKSYPISPGK-PSTP--------TPVGTFRIIS 88 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQ 161 + + + + + G IHG S GC M N ++ Sbjct: 89 KAYWGDGFGGRWMGLN------VRYGKYG----IHGTIYENYIGAHVSQGCVRMRNDDIK 138 Query: 162 EIYAIVR--------DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 E+++ + + G ++ + FP M + + F Sbjct: 139 ELFSYIPIGTTVILSEGAYGEFRNGFRT-IFPGDTGDDVMAVQRRLKELGF 188 >gi|284929484|ref|YP_003422006.1| hypothetical protein UCYN_09450 [cyanobacterium UCYN-A] gi|284809928|gb|ADB95625.1| uncharacterized conserved protein [cyanobacterium UCYN-A] Length = 181 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 35/182 (19%) Query: 7 ILLFALFIFLNGCH----HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV--IRIFKNE 60 LFA L + + I K + + + + I I E Sbjct: 5 FSLFAFTFILTSQNLTLLGEDTTISKQSEIIISRIKNPISIIALTEDKAMASHISINLKE 64 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKY 118 + +++ + ++K YK+ G K P+G + + NP + + Sbjct: 65 RRVYVYQNS-----EVIKSYKVA-----IGKKGWE----TPKGNFAVMEMVENPQWKNPW 110 Query: 119 FLSINIGFPN-----EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYA 165 I+ PN + + G + HG S GC M N+ ++E+Y Sbjct: 111 NGRISAAGPNSPLGERWIAFSQQDGKYVGFHGTAGEHSMGKAVSHGCVRMRNQDVKELYE 170 Query: 166 IV 167 +V Sbjct: 171 LV 172 >gi|114320738|ref|YP_742421.1| ErfK/YbiS/YcfS/YnhG family protein [Alkalilimnicola ehrlichii MLHE-1] gi|114227132|gb|ABI56931.1| ErfK/YbiS/YcfS/YnhG family protein [Alkalilimnicola ehrlichii MLHE-1] Length = 329 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 48/191 (25%) Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 P ++ + P + + E L ++ E ++ Y + Sbjct: 82 PGEGTEVVVPTRFILPPGPREGVVVNVAEMRLYYYRPVTAGERRRVETYPVSVGRM---- 137 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSI------------NIGFPNEFDKAHNR--- 136 D + P G I +P+ SI P D R Sbjct: 138 -----DWETPVGRTEITAKAEDPSWYPPESIREYARREQGKELPRVVPPGPDNPLGRHAL 192 Query: 137 ----TGADLMIHGEC--------ASAGCYAMNNKQMQEIY---------AIVRDSLRGNM 175 G +IHG ++GC M + ++E++ +V + Sbjct: 193 RLGIPGY--LIHGTNRPWGIGMRVTSGCIRMYPEDIEELFPRLPVGTPVRLVNAPFKAGW 250 Query: 176 Q-SHIQIQAFP 185 + + +QA+P Sbjct: 251 KGDTLYLQAYP 261 >gi|311896707|dbj|BAJ29115.1| hypothetical protein KSE_33050 [Kitasatospora setae KM-6054] Length = 304 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 48/152 (31%), Gaps = 41/152 (26%) Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG---WNNLNPN 115 ++N + +W R D + + + + +GD ++P G + + +P Sbjct: 141 SDNTVTLWTRGDDGSWQAGQAWPAHNAYKGWTADHRSGDLRSPIGLFSLTDAGGRKADPG 200 Query: 116 SKYF--------------------LSIN----IGFPN------EFDKAH---NRTGADLM 142 SK S + I + N D + G + Sbjct: 201 SKLPYDENKKFVMSGRGFNNEPLAGSFDYVVAINY-NRVEGTSPLDTTYPQGAAKGGGIW 259 Query: 143 IH---GECASAGCYAMNNKQMQEIYAIVRDSL 171 +H G + GC ++ M E+ + +L Sbjct: 260 LHLDHGGP-THGCVSLTEDHMVELIRTLDPAL 290 >gi|328911454|gb|AEB63050.1| L,D-transpeptidase [Bacillus amyloliquefaciens LL3] Length = 160 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 33/126 (26%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I ++ L++++ L++ Y I KI T P G +YI Sbjct: 57 PYSIVVYIGAKKLQLYRLG-----RLIRTYPIAVG------KILT---TTPTGEFYIVNR 102 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 P + + + ++ + HG S GC M+N+ + E Sbjct: 103 QPKPGGPF-GAYWLS--------LSKLHYGI--HGTNDPSSIGKAVSKGCIRMHNQDVTE 151 Query: 163 IYAIVR 168 + A V Sbjct: 152 LAATVP 157 >gi|157692082|ref|YP_001486544.1| peptidoglycan binding protein [Bacillus pumilus SAFR-032] gi|157680840|gb|ABV61984.1| peptidoglycan binding protein [Bacillus pumilus SAFR-032] Length = 165 Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + + L ++ + L++ Y I P G YYI Sbjct: 56 PYRISVSISSKRLVLFSGS-----ELIRSYPIATGRIL---------NMTPTGSYYIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC M N+ + E Sbjct: 102 QPNPGGPF-GAYWLS------LSKVHYG----IHGTNNPSSIGKAVSRGCIRMYNQNVIE 150 Query: 163 IYAIVRDS 170 + +IV + Sbjct: 151 LASIVPNG 158 >gi|260887313|ref|ZP_05898576.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC 35185] gi|260862949|gb|EEX77449.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC 35185] Length = 429 Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 52/202 (25%), Gaps = 56/202 (27%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDK--------------AEHPLSENLIIS--MQKK 44 M + F +G +K AE P E + S Sbjct: 20 MMFKQIAAFFVCLSMFSGVSGWAGATEKEQGSSYGAWVKDISAESPEPEKVHASEVKSAA 79 Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 P I I L ++K N ++ Y + + P G+ Sbjct: 80 AEKTGDPYKIIINVAARSLGVYKNN-----EKIRLYPVGLGKLST---------PTPVGY 125 Query: 105 YYIGWNNLNPN-----------SKYFLSINIGFPNEFDKAHNRTGADLMIHGEC------ 147 + + NP + +G+ + + G IHG Sbjct: 126 FSVLTKEENPTWVDPGDSKNTIPSGEGN-PLGY--RWMQVWGNYG----IHGTNHPESIG 178 Query: 148 --ASAGCYAMNNKQMQEIYAIV 167 S GC M ++E+Y Sbjct: 179 SYVSNGCIRMKEADVEEVYDYA 200 >gi|194014419|ref|ZP_03053036.1| peptidoglycan binding protein [Bacillus pumilus ATCC 7061] gi|194013445|gb|EDW23010.1| peptidoglycan binding protein [Bacillus pumilus ATCC 7061] Length = 166 Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + + L ++ + L++ Y I P G YYI Sbjct: 57 PYRISVSISSKRLVLFSGS-----ELIRSYPIATGRIL---------NMTPTGSYYIVNR 102 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC M N+ + E Sbjct: 103 QPNPGGPF-GAYWLS------LSKVHYG----IHGTNNPSSIGKAVSRGCIRMYNQNVIE 151 Query: 163 IYAIVRDS 170 + +IV + Sbjct: 152 LASIVPNG 159 >gi|134297972|ref|YP_001111468.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1] gi|134050672|gb|ABO48643.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1] Length = 192 Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 33/132 (25%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 + I + ++ L K Y + T P G Y Sbjct: 5 MMYRAGIELLIDPQSRQINVYIGK-----QLSKSYPVGVGKATT---------PTPAGNY 50 Query: 106 YIGWNNLNPNS-KYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMN 156 + +P + + P G + IHG SAGC M Sbjct: 51 QVVNKVTHPGGILGTRWLGLNIP----------GGNYGIHGTSNPSSIGKLVSAGCIRMY 100 Query: 157 NKQMQEIYAIVR 168 N+ ++E++ ++ Sbjct: 101 NENVEELFPMIP 112 >gi|256004227|ref|ZP_05429210.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM 2360] gi|255991817|gb|EEU01916.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM 2360] gi|316939606|gb|ADU73640.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM 1313] Length = 289 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 37/131 (28%) Query: 48 PFHPTVIRIFKN--ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 P P+ +RI + L +++ L+K Y + P P G + Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYRDG-----RLVKSYPVATGK-PTTP--------TPRGTF 221 Query: 106 YIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMN 156 I +NP + + + P G IHG S GC M Sbjct: 222 TIINKQVNPGGPFGTRWMGLSQP--------HYG----IHGTNNPASIGTAASNGCIRMY 269 Query: 157 NKQMQEIYAIV 167 N+ + E++ +V Sbjct: 270 NEDVNELFNLV 280 >gi|281419482|ref|ZP_06250496.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20] gi|281406888|gb|EFB37152.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20] Length = 289 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 37/131 (28%) Query: 48 PFHPTVIRIFKN--ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 P P+ +RI + L +++ L+K Y + P P G + Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYRDG-----RLVKSYPVATGK-PTTP--------TPRGTF 221 Query: 106 YIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMN 156 I +NP + + + P G IHG S GC M Sbjct: 222 TIINKQVNPGGPFGTRWMGLSQP--------HYG----IHGTNNPASIGTAASNGCIRMY 269 Query: 157 NKQMQEIYAIV 167 N+ + E++ +V Sbjct: 270 NEDVNELFNLV 280 >gi|125975485|ref|YP_001039395.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] gi|125715710|gb|ABN54202.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] Length = 289 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 37/131 (28%) Query: 48 PFHPTVIRIFKN--ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 P P+ +RI + L +++ L+K Y + P P G + Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYRDG-----RLVKSYPVATGK-PTTP--------TPRGTF 221 Query: 106 YIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMN 156 I +NP + + + P G IHG S GC M Sbjct: 222 TIINKQVNPGGPFGTRWMGLSQP--------HYG----IHGTNNPASIGTAASNGCIRMY 269 Query: 157 NKQMQEIYAIV 167 N+ + E++ +V Sbjct: 270 NEDVNELFNLV 280 >gi|205373543|ref|ZP_03226346.1| hypothetical protein Bcoam_09775 [Bacillus coahuilensis m4-4] Length = 164 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 33/125 (26%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 SP +P I I + ++ L ++K N + K Y I KI + + P G Y Sbjct: 52 SPSNPFRILINRQDHTLTLYKDNT-----VYKTYPIAVG------KIAS---ETPIGNYI 97 Query: 107 IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158 I NP + ++ + + G IHG S GC M NK Sbjct: 98 IINKAPNPGGPF-GAMWMS------ISKEHYG----IHGTNNPSSIGKNVSLGCIRMYNK 146 Query: 159 QMQEI 163 + E+ Sbjct: 147 DVVEL 151 >gi|300856612|ref|YP_003781596.1| hypothetical protein CLJU_c34530 [Clostridium ljungdahlii DSM 13528] gi|300436727|gb|ADK16494.1| conserved protein [Clostridium ljungdahlii DSM 13528] Length = 220 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 52/179 (29%), Gaps = 53/179 (29%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M ILL LF P + + KK I + E Sbjct: 1 MRKISFILLLILFF-----------------PNASIIRAKESKKNLG------ILVDVTE 37 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 +L + ++ + ++++Y + + +P G + + Sbjct: 38 EMLYLIDKDKN---TIIRKYPVASGKSET---------PSPIGTWKVVSMASWSGGFGTR 85 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171 I + P + G IHG S GC M N ++++Y V + Sbjct: 86 WIGLNVP------WGKFG----IHGTNKPHSIGGEASHGCIRMLNSDVEDLYNYVYYGM 134 >gi|169830630|ref|YP_001716612.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis audaxviator MP104C] gi|169637474|gb|ACA58980.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis audaxviator MP104C] Length = 266 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 33/133 (24%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K+ N L + E ++ Y + E PEG + + Sbjct: 138 IIINKSANRLYFY---QGGELAVI--YSVATGKRP---------EYTPEGTFTVVNKVSL 183 Query: 114 P-----NSKYFLS-INIGFPNEFDKAHN---RTGADLM--IHGEC--------ASAGCYA 154 P + ++ L + + P E D+ R + IHG AS GC Sbjct: 184 PGDNDSDPRFGLRWLGLAVPCEKDRRRENDPRAPGGIKYGIHGTNEPDSIGTHASGGCVR 243 Query: 155 MNNKQMQEIYAIV 167 + N+ + E++ +V Sbjct: 244 LRNEDIVELFELV 256 >gi|312114874|ref|YP_004012470.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC 17100] gi|311220003|gb|ADP71371.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC 17100] Length = 139 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 29/130 (22%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 +RI K+ ++ ++ + + G P G Y Sbjct: 22 QADVEVRISKSRQMMYVYLDG-----EHYYSWPVSTARGG---------YNTPNGVYRPQ 67 Query: 109 W--------NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQM 160 N Y + + G+ H D+ G S GC ++ + Sbjct: 68 RLAVFHRSSKYNNSPMPYSIFFHGGY-----AIHGS--YDIGNLGRPVSHGCIRLHPEDA 120 Query: 161 QEIYAIVRDS 170 +E+Y +V DS Sbjct: 121 RELYGLVSDS 130 >gi|253573319|ref|ZP_04850662.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846847|gb|EES74852.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 486 Score = 50.3 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 43/154 (27%) Query: 34 SENLIISMQKKRTSP--FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 + ++ P P + + + L + N VL++ Y + Sbjct: 323 APEVLAEGMAPGQRPFFAEPYEMIVDTKTHTLAVVSGN-----VLIRSYPVGLGGS---- 373 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSK-----YFLSINIGFPNEFDKAHNRTGADLMIHGE 146 + PEG + I +NPN + + + T + HG Sbjct: 374 -------RTPEGTFVISEKVINPNGRDSGEFGSRGMQLS----------DTNYAI--HGT 414 Query: 147 CA--------SAGCYAMNNKQMQEIYAIVRDSLR 172 S GC M K ++E++ +V R Sbjct: 415 NEPDSIGKDESLGCIRMGKKDVEELFDLVPKGTR 448 >gi|15895682|ref|NP_349031.1| peptidoglycan-binding domain-containing protein [Clostridium acetobutylicum ATCC 824] gi|15025432|gb|AAK80371.1|AE007742_5 Uncharacterized protein, ErfK family; contains peptidoglycan-binding domain [Clostridium acetobutylicum ATCC 824] gi|325509832|gb|ADZ21468.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018] Length = 235 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 32/140 (22%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + +I + N + +++ + LLK Y I P +P G Sbjct: 39 GYNSKKKILIVVDVVSNRMCVFQDD-----KLLKTYTIAGGK-PSTP--------SPIGT 84 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMN 156 + I + + P + G IHG S GC M Sbjct: 85 WTIVGKDTWGEGFGGRWMGFNVP------WGKYG----IHGTIFPDSIGGNTSHGCIRMR 134 Query: 157 NKQMQEIYAIVRDSLRGNMQ 176 N ++E+Y I + +Q Sbjct: 135 NDDVRELYKITPVGTKVIVQ 154 >gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501] gi|67857255|gb|EAM52495.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501] Length = 191 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 55/176 (31%), Gaps = 39/176 (22%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFH----PTVIRIFKNENILEIWKRNVDAE 73 + + L + T+P + T + + E + +++ + Sbjct: 28 AIASEGTTPETPPTELPVTSPVEEAAIPTAPENNQTLATHVVLNLKERRVYVYQDD---- 83 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----GWNNLNPNSKYFLSINIGFPN 128 ++ Y++ + P+G + + NP + + PN Sbjct: 84 -QVIANYRVAIGRPG---------WETPKGNFSVIQMVEDPQWKNPWNGRVSAPG---PN 130 Query: 129 -----EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSL 171 + G + HG S GC M N+ ++E+Y +V++ + Sbjct: 131 SPLGERWIGFSREGGKYIGFHGTPGEHVMGQAVSHGCVRMRNRDVKELYELVQNGI 186 >gi|167465780|ref|ZP_02330869.1| hypothetical protein Plarl_24988 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 488 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 35/144 (24%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 + + P I + + L + N +++ + + G K Sbjct: 326 ATSVKPEHAEDQLFEEPLRIVVDRRAYRLAVISGNT-----IIRTFPVGLG----GEK-- 374 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM--IHGECA---- 148 P+G + I NPN K + T +D + IHG Sbjct: 375 -----TPDGEFTITEKVRNPNGKSNGEFG---------SRGMTLSDTLYAIHGTNEPDSI 420 Query: 149 ----SAGCYAMNNKQMQEIYAIVR 168 S GC M + ++E++ +V Sbjct: 421 GQDESKGCIRMGKEDVEELFDLVP 444 >gi|322384184|ref|ZP_08057894.1| murein transglycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151076|gb|EFX44393.1| murein transglycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 500 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 35/144 (24%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 + + P I + + L + N +++ + + G K Sbjct: 338 ATSVKPEHAEDQLFEEPLRIVVDRRAYRLAVISGNT-----IIRTFPVGLG----GEK-- 386 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM--IHGECA---- 148 P+G + I NPN K + T +D + IHG Sbjct: 387 -----TPDGEFTITEKVRNPNGKSNGEFG---------SRGMTLSDTLYAIHGTNEPDSI 432 Query: 149 ----SAGCYAMNNKQMQEIYAIVR 168 S GC M + ++E++ +V Sbjct: 433 GQDESKGCIRMGKEDVEELFDLVP 456 >gi|294497041|ref|YP_003560741.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551] gi|294346978|gb|ADE67307.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551] Length = 178 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 42/133 (31%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I I K N L + L K Y + P GF+ I Sbjct: 37 LIIINKKTNQLAYFHNG-----KLEKTYSVATGKTWSD---------TPVGFFKIVNKIK 82 Query: 113 N-PNSKYFLS------------INIGFPNEFDKAHNRTGADLMIHGECA--------SAG 151 N P ++ + + A+ TG IHG + S G Sbjct: 83 NRPYYTGHIAGGAPNNPLGSLWLGLN-------ANGTTGDTYAIHGNNSEDSIGKYVSHG 135 Query: 152 CYAMNNKQMQEIY 164 C M+N ++E++ Sbjct: 136 CVRMHNADIEELF 148 >gi|281417038|ref|ZP_06248058.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20] gi|281408440|gb|EFB38698.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20] Length = 230 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 65/190 (34%), Gaps = 46/190 (24%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I I +E L ++K VLLK Y + P +PEG + I + Sbjct: 34 YYIYINLDELKLYLYKDG-----VLLKTYPVSGGK-PETP--------SPEGTWKIISKS 79 Query: 112 LNPNSKYFLS-INIGFPNEFDKAHNRTGADLMIHGE---------CASAGCYAMNNKQMQ 161 + + S + + P + G IHG AS GC M NK + Sbjct: 80 -DWGGNFGGSWMGLNVP------WGQYG----IHGTKYPWYIGRQNASHGCIRMYNKNAK 128 Query: 162 EIYAIVRDS-----------LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKL 210 E+Y IV + + + K + + + P+ F + LK Sbjct: 129 ELYDIVPYGTIVTIVHKNRPFKELKSGDVGSDVLKVQKALKKLGYFHDWPSGKFQDNLKK 188 Query: 211 GHDYFEKNHQ 220 F+KN++ Sbjct: 189 SVIKFQKNNK 198 >gi|148270116|ref|YP_001244576.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga petrophila RKU-1] gi|147735660|gb|ABQ47000.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga petrophila RKU-1] Length = 382 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 46/152 (30%), Gaps = 45/152 (29%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 +P I + + L ++ VLLK Y + P G Y++ Sbjct: 247 RENPVTIVVNLFSSKLALYYDG-----VLLKVYPVALGRSDA----------TPPGRYWV 291 Query: 108 GWNNLNPNSKYFL----------SINIGFPNEFDKAHNRTGADLMIHGE--CA------S 149 ++P +F + + D + IHG S Sbjct: 292 LRKEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYA-------IHGTSKPWEIGKRIS 344 Query: 150 AGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181 GC M N+ ++EI D+ G + + Sbjct: 345 HGCIRMFNRDVEEI-----DAFAGVGTEVVVV 371 >gi|319649778|ref|ZP_08003931.1| hypothetical protein HMPREF1013_00535 [Bacillus sp. 2_A_57_CT2] gi|317398532|gb|EFV79217.1| hypothetical protein HMPREF1013_00535 [Bacillus sp. 2_A_57_CT2] Length = 165 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 33/135 (24%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + + + L + + K Y I Q P G + I Sbjct: 56 PYTIIVSRGKRSLTLLYNG-----AIQKVYPIAVGKMLT---------QTPIGEFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP Y + + ++ G + HG S GC M N+ + E Sbjct: 102 EPNPGGPY-GVMWLS--------LSKAGYGI--HGTNNPSSIGQSVSQGCIRMYNQDVLE 150 Query: 163 IYAIVRDSLRGNMQS 177 + IV + R +Q Sbjct: 151 LSRIVPNGTRVRIQP 165 >gi|15644434|ref|NP_229486.1| hypothetical protein TM1686 [Thermotoga maritima MSB8] gi|4982262|gb|AAD36753.1|AE001809_5 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 395 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 46/152 (30%), Gaps = 45/152 (29%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 +P I + + L ++ VLLK Y + P G Y++ Sbjct: 260 RENPVTIVVNLFSSKLALYYDG-----VLLKVYPVALGRSDA----------TPPGRYWV 304 Query: 108 GWNNLNPNSKYFL----------SINIGFPNEFDKAHNRTGADLMIHGE--CA------S 149 ++P +F + + D + IHG S Sbjct: 305 LRKEIDPALYWFGEYISPRTPLNGLGTRYLQLSDPTYA-------IHGTSKPWEIGKRIS 357 Query: 150 AGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181 GC M N+ ++EI D+ G + + Sbjct: 358 HGCIRMFNRDVEEI-----DAFAGVGTEVVVV 384 >gi|172037339|ref|YP_001803840.1| hypothetical protein cce_2426 [Cyanothece sp. ATCC 51142] gi|171698793|gb|ACB51774.1| unknown [Cyanothece sp. ATCC 51142] Length = 198 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 44/174 (25%) Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYV 75 L +++A P ++ + + E + ++ + Sbjct: 46 LPATSTVTPPVEEAAIPTPPETTQTLATH---------LVLNLKERRVYAYQDD-----Q 91 Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-----GWNNLNPNSKYFLSINIGFPN-- 128 ++ Y + + P G + + NP + + PN Sbjct: 92 VIANYPVAIGKPG---------WETPRGDFSVIQMVEDPQWKNPWNGRVSAAG---PNSP 139 Query: 129 ---EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSL 171 + G + HG S GC M N+ ++ +Y +V+ + Sbjct: 140 LGERWIGFWREGGKYIGFHGTPGEHVMGQAVSHGCVRMRNRDVKALYELVQTGI 193 >gi|158334241|ref|YP_001515413.1| ErfK/YbiS/YcfS/YnhG family protein [Acaryochloris marina MBIC11017] gi|158304482|gb|ABW26099.1| ErfK/YbiS/YcfS/YnhG family protein [Acaryochloris marina MBIC11017] Length = 201 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 53/190 (27%), Gaps = 43/190 (22%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + + A + G S + AE + E + + + R Sbjct: 20 MKTEFIKIACVVISVGTIASFDVAQAAEQNIPETPLPGLDQPRNYLPSA------HGTRR 73 Query: 63 LEIWKRNVDAEY----VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP---- 114 LE+ +LK Y + P G + + NP Sbjct: 74 LELSISRRQVTLFQGDQVLKSYPVAVGKAG---------WPTPVGDFEVQTKVRNPSWQN 124 Query: 115 --NSKYFLSINIGFP-NEFDKAH------NRTGADLMIHGECA--------SAGCYAMNN 157 K ++ I G P N + + HG S GC M + Sbjct: 125 PFQGKGYV-IPGGAPDNPLSTRWLGFWTNGKN--WIGFHGTPNRASVGSAASHGCVRMYD 181 Query: 158 KQMQEIYAIV 167 + +QE++ +V Sbjct: 182 EHIQELFELV 191 >gi|221313601|ref|ZP_03595406.1| hypothetical protein BsubsN3_07732 [Bacillus subtilis subsp. subtilis str. NCIB 3610] Length = 167 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + L + N ++K Y I KI T Q P G +YI Sbjct: 58 PYHIAVSIGAKTLTLSLNN-----RVMKTYPIAVG------KILT---QTPTGEFYIINR 103 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC M+NK + E Sbjct: 104 QRNPGGPF-GAYWLS------LSKQHYG----IHGTNNPASIGKAVSKGCIRMHNKDVIE 152 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 153 LASIVPNGTR 162 >gi|221309274|ref|ZP_03591121.1| hypothetical protein Bsubs1_07796 [Bacillus subtilis subsp. subtilis str. 168] gi|221318523|ref|ZP_03599817.1| hypothetical protein BsubsJ_07666 [Bacillus subtilis subsp. subtilis str. JH642] gi|221322797|ref|ZP_03604091.1| hypothetical protein BsubsS_07777 [Bacillus subtilis subsp. subtilis str. SMY] Length = 159 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + L + N ++K Y I KI T Q P G +YI Sbjct: 50 PYHIAVSIGAKTLTLSLNN-----RVMKTYPIAVG------KILT---QTPTGEFYIINR 95 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC M+NK + E Sbjct: 96 QRNPGGPF-GAYWLS------LSKQHYG----IHGTNNPASIGKAVSKGCIRMHNKDVIE 144 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 145 LASIVPNGTR 154 >gi|16078468|ref|NP_389287.1| murein transglycosylase [Bacillus subtilis subsp. subtilis str. 168] gi|81342402|sp|O34816|YKUD_BACSU RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore protein YkuD gi|2632225|emb|CAA10867.1| YkuD protein [Bacillus subtilis] gi|2633775|emb|CAB13277.1| murein transglycosylase [Bacillus subtilis subsp. subtilis str. 168] Length = 164 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + L + N ++K Y I KI T Q P G +YI Sbjct: 55 PYHIAVSIGAKTLTLSLNN-----RVMKTYPIAVG------KILT---QTPTGEFYIINR 100 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC M+NK + E Sbjct: 101 QRNPGGPF-GAYWLS------LSKQHYG----IHGTNNPASIGKAVSKGCIRMHNKDVIE 149 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 150 LASIVPNGTR 159 >gi|150390862|ref|YP_001320911.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens QYMF] gi|149950724|gb|ABR49252.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens QYMF] Length = 332 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 48/152 (31%), Gaps = 32/152 (21%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 ++ + + P + I K + IL +++ + ++K+Y + Sbjct: 97 VNGSERRYLDVIDQPPTKGKWMTINKTKRILTLYEGD-----KVMKKYPVAQGKEP---- 147 Query: 93 IETGDEQAPEGFYYIGWNNLNP-----------------NSKYFLSINIGFPNEFDKAHN 135 PEG + I +NP N + + I + Sbjct: 148 -----GLTPEGKFTIVNKLVNPGWGGAGIAQPVKGGSPNNPLGYRWMGINHGGGGSYGIH 202 Query: 136 RTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167 I G AS GC M N + E++ I+ Sbjct: 203 GNNNPRSI-GTNASLGCVRMINSDVAELFDII 233 >gi|329928325|ref|ZP_08282196.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5] gi|328937882|gb|EGG34287.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5] Length = 223 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 40/129 (31%), Gaps = 33/129 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I I+ + L + + ++K Y + P P G + + Sbjct: 32 QSNLEIAIYPERHKLLVREHG-----QIIKTYSVAVG-NPSTP--------TPVGDFRVK 77 Query: 109 WNNLNPN-SKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQ 159 + N S I + P G IHG S GC M+NK Sbjct: 78 YKGTNWGPSFGPRWIGLNVP------WGNFG----IHGTNKPYSIGQHLSHGCIRMHNKD 127 Query: 160 MQEIYAIVR 168 + E+Y ++ Sbjct: 128 VIELYELIP 136 >gi|220929205|ref|YP_002506114.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10] gi|219999533|gb|ACL76134.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10] Length = 236 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 48/172 (27%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 +LL ALF +N + + + + T+ +I + +E L Sbjct: 16 VFLLLIALFFAVN----------------TFVIKGNFTRHATNNQQQFLIFVHIDEKTLY 59 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 +++ +K+Y I + +P G + I + + + Sbjct: 60 LFENE-----KCIKKYPIASGKPG---------WPSPIGEWKIVEKSQWGKGFGGRWLGL 105 Query: 125 GFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEIYAIVR 168 G IHG AS GC M N+ ++E+Y I Sbjct: 106 N------VRWGNYG----IHGTQDESSIGRSASHGCIRMYNRDIKELYDIAP 147 >gi|125972839|ref|YP_001036749.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] gi|256005881|ref|ZP_05430828.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM 2360] gi|125713064|gb|ABN51556.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405] gi|255990150|gb|EEU00285.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM 2360] gi|316940925|gb|ADU74959.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM 1313] Length = 230 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 35/129 (27%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I I +E L ++K VLLK Y + P +PEG + I + Sbjct: 34 YYIYINLDELKLYLYKDG-----VLLKTYPVSGGK-PETP--------SPEGTWKIISKS 79 Query: 112 LNPNSKYFLS-INIGFPNEFDKAHNRTGADLMIHGE---------CASAGCYAMNNKQMQ 161 + + S + + P + G IHG AS GC M NK + Sbjct: 80 -DWGGNFGGSWMGLNVP------WGQYG----IHGTKYPWYIGRQNASHGCIRMYNKNAK 128 Query: 162 EIYAIVRDS 170 E+Y IV Sbjct: 129 ELYDIVPYG 137 >gi|332799591|ref|YP_004461090.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1] gi|332697326|gb|AEE91783.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1] Length = 307 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 49/192 (25%), Gaps = 47/192 (24%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P + IF E L + K++ + P G + I Sbjct: 114 PKGEVSLVIFTLERQLIVLDDG-----KPFKQFPVAVGKFNT---------PTPIGIFTI 159 Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQ 159 ++ + + P G IHG S+GC M N Sbjct: 160 TQKDIWSGEFGSRWMRLSVP------WGIYG----IHGTNKPWSIGTFESSGCIRMYNTH 209 Query: 160 MQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNH 219 ++++Y V+ + M + PF + G D E Sbjct: 210 VEQVYEWVKIGTKVFMVGGVD---GPFTFGLNTLSQGS------------RGSDVLEVQK 254 Query: 220 QEPFIQIINKQY 231 + N Y Sbjct: 255 RLAGYGFYNGDY 266 >gi|282855703|ref|ZP_06265010.1| secreted protein [Pyramidobacter piscolens W5455] gi|282586435|gb|EFB91696.1| secreted protein [Pyramidobacter piscolens W5455] Length = 220 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 49/155 (31%), Gaps = 55/155 (35%) Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFG--PKIETGDEQAPEGFYYI---------- 107 + L +WK++ + K + G G GD++ P G + I Sbjct: 48 DRALSLWKKSDAGAWE--KTLEAPCGYGKLGLTENKREGDKKTPVGAFPILHAFGNKPNP 105 Query: 108 ----GWNNLNPNSK-------------------------------YFLSINIGFPNEFDK 132 W + PNS Y ++ +G+ N Sbjct: 106 GTAMKWRPVTPNSYWADDVNQPKIYNTWVESAKKIHGEHLADYYQYDYAMAVGY-NADPA 164 Query: 133 AHNRTGADLMIHGE----CASAGCYAMNNKQMQEI 163 R G+ + +H + +AGC ++ + M E+ Sbjct: 165 VPGR-GSAIFVHVKSRRHWTTAGCLSLERRDMIEL 198 >gi|295400837|ref|ZP_06810813.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977100|gb|EFG52702.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius C56-YS93] Length = 165 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I + L + K +++ Y I P G + I Sbjct: 56 PYTIHISVSRRQLTLKKNGS-----IVRIYPIAVGKMVTA---------TPVGDFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + +I + + G IHG S GC M+NK + E Sbjct: 102 QPNPGGPF-GAIWLS------LSKIHYG----IHGTNNPSSIGKYVSKGCIRMHNKDVLE 150 Query: 163 IYAIVRDS 170 + ++V + Sbjct: 151 LASLVPNG 158 >gi|291455450|ref|ZP_06594840.1| lipoprotein [Streptomyces albus J1074] gi|291358399|gb|EFE85301.1| lipoprotein [Streptomyces albus J1074] Length = 248 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 61/187 (32%), Gaps = 44/187 (23%) Query: 20 HHSRSLIDKAEHPLSENL--IISMQKKRTSPFHPTVIRIF-----KNENILEIWKRNVDA 72 +R +A L I +K+ V+ ++ + + ++ ++ D Sbjct: 41 GEARQPDARASSAAPGELPGISERFRKQIPDDTRQVVAVYGDGADRATATVVLYTKDGDG 100 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-----------------------W 109 + ++ + P D+++P G + + Sbjct: 101 -WKKRADWPAHNGKKGWTPDHHEDDKRSPVGVFTLTDAGGVLADPGPGGLPYTRSDAFAA 159 Query: 110 NNLNPNSKYF---LSINIGF-------PNEFDKAHNRT-GADLMIHGECAS--AGCYAMN 156 S + L I I + PN+ + ++ G + +H + S +GC +++ Sbjct: 160 PRTWAESHWHDFDLVIAIDYNRVKGTPPNDPTRPEGQSKGGSIWLHMDHGSGTSGCVSLS 219 Query: 157 NKQMQEI 163 + M+ + Sbjct: 220 EQGMRHL 226 >gi|239983640|ref|ZP_04706164.1| lipoprotein [Streptomyces albus J1074] Length = 245 Score = 49.5 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 61/187 (32%), Gaps = 44/187 (23%) Query: 20 HHSRSLIDKAEHPLSENL--IISMQKKRTSPFHPTVIRIF-----KNENILEIWKRNVDA 72 +R +A L I +K+ V+ ++ + + ++ ++ D Sbjct: 38 GEARQPDARASSAAPGELPGISERFRKQIPDDTRQVVAVYGDGADRATATVVLYTKDGDG 97 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-----------------------W 109 + ++ + P D+++P G + + Sbjct: 98 -WKKRADWPAHNGKKGWTPDHHEDDKRSPVGVFTLTDAGGVLADPGPGGLPYTRSDAFAA 156 Query: 110 NNLNPNSKYF---LSINIGF-------PNEFDKAHNRT-GADLMIHGECAS--AGCYAMN 156 S + L I I + PN+ + ++ G + +H + S +GC +++ Sbjct: 157 PRTWAESHWHDFDLVIAIDYNRVKGTPPNDPTRPEGQSKGGSIWLHMDHGSGTSGCVSLS 216 Query: 157 NKQMQEI 163 + M+ + Sbjct: 217 EQGMRHL 223 >gi|126658355|ref|ZP_01729504.1| hypothetical protein CY0110_27385 [Cyanothece sp. CCY0110] gi|126620287|gb|EAZ91007.1| hypothetical protein CY0110_27385 [Cyanothece sp. CCY0110] Length = 191 Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 37/170 (21%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 + S PL E I++ ++ + V+ + E + +++ + ++ Sbjct: 36 PATPSTELPVTLPLEEAAIVTPEETIETLATRVVLNL--KERKVYVYQDD-----QVIAN 88 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYI-----GWNNLNPNSKYFLSINIGFPN-----E 129 Y + + P G + + NP + + PN Sbjct: 89 YPVAIGKPG---------WETPRGEFSVIQMVEDPQWKNPWNGRVSAAG---PNSPLGER 136 Query: 130 FDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSL 171 + G + HG S GC M N+ ++ +Y +V+ + Sbjct: 137 WIGFWREGGKYIGFHGTPGEHVMGQAVSHGCVRMRNQDVKALYELVQTGI 186 >gi|207111612|ref|ZP_03245774.1| conserved hypothetical secreted protein [Helicobacter pylori HPKX_438_CA4C1] Length = 42 Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 8/40 (20%) Query: 127 PNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158 PN +D RTG + +HG + GC A+ N Sbjct: 1 PNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENP 40 >gi|315652262|ref|ZP_07905254.1| S-layer family protein and secreted protein with 1 GW repeat fusion protein [Eubacterium saburreum DSM 3986] gi|315485385|gb|EFU75775.1| S-layer family protein and secreted protein with 1 GW repeat fusion protein [Eubacterium saburreum DSM 3986] Length = 231 Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 70/214 (32%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN---ILEI 65 L A F+ ++ S + A P+ + I + H +I KN + Sbjct: 7 LCATFVVMSTLLASTGVNAYAALPVEKLSISK------TANHIILIVGHKNNKNRVTVND 60 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFG--PKIETGDEQAPEGFYY--------------IGW 109 + ++ D + +K + + +GT G + GD++ PEG + I + Sbjct: 61 YTKSSDGTW--IKNWYVNGIAGTNGISTEKREGDKKTPEGVFNAMFSFGLKDNPGSLIEY 118 Query: 110 NNL--------NPNSKYF---------------------------LSINIGFPNEFDKAH 134 + + NS Y+ ++ + + N Sbjct: 119 RKITDGDYWVDDSNSAYYNTWVNTSKVNKDWASAEDLKTAYPFYNYALALNY-NTE-AVP 176 Query: 135 NRTGADLMIH-----GECASAGCYAMNNKQMQEI 163 + G+ + IH + +SAGC + + M+++ Sbjct: 177 GK-GSAIFIHCTKTDNDTSSAGCVRIPEEYMKKL 209 >gi|94968756|ref|YP_590804.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345] gi|94550806|gb|ABF40730.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345] Length = 205 Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 36/169 (21%) Query: 34 SENLIISMQKKRTSPFHPT-VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 + + + + + PT +I + + L + + + ++K Y + + Sbjct: 27 TAQTVQATEARPMEAPRPTRLILVSIPDRKLALLEDD-----KVVKVYPVAVGKDST--- 78 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR------TGADLMIHGE 146 +PEG + I + NP + Y + P + +R G + HG Sbjct: 79 ------PSPEGTFTIKSHVTNP-TYYHEGKVVA-PGPQNPLGSRWMGLSEKGYGI--HGT 128 Query: 147 CA--------SAGCYAMNNKQMQEIYAIVR--DSLRGNMQSHIQI-QAF 184 A S GC M K ++E++ +V+ D + + Q+ Q F Sbjct: 129 NAPKSIGKAASHGCIRMAKKDLEELFTLVKVGDGVDIRGERDEQMAQVF 177 >gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Clostridium tetani E88] gi|28203320|gb|AAO35762.1| tonB-dependent receptor protein [Clostridium tetani E88] Length = 312 Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 48/147 (32%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 + H + I K++ IL ++ + K+Y + A + PEG + Sbjct: 168 TLKHGYSMVINKDKRILTVYLDG-----KVYKKYPVAAGASPS---------YTPEGKFT 213 Query: 107 IGWNNLNP-----------------NSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA- 148 I +NP N + + G+ IHG Sbjct: 214 IVSKLINPTWISTRTGQVISGGTPQNPLGKRWLGLSI---------DGGSMYGIHGSNNP 264 Query: 149 -------SAGCYAMNNKQMQEIYAIVR 168 S GC M N ++E++ + Sbjct: 265 WSIGTNVSLGCIRMFNNDVEELFDFIP 291 >gi|331004214|ref|ZP_08327693.1| hypothetical protein HMPREF0491_02555 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411487|gb|EGG90898.1| hypothetical protein HMPREF0491_02555 [Lachnospiraceae oral taxon 107 str. F0167] Length = 231 Score = 49.1 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 70/224 (31%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN- 61 + + A F L+ S + A P+ + + + H +I KN Sbjct: 1 MKLFKKICATFALLSTLLASTYVNTYAALPVEQLAVSK------TANHIILIVGHKNNKN 54 Query: 62 --ILEIWKRNVDAEYVLLKEYKI--CAWSGTFGPKIETGDEQAPEGFYY----------- 106 + + ++ D + K + + A + + GD++ PEG + Sbjct: 55 KVTVNDYTKSSDGTWT--KNWYVGGIAGTNGISTQKSEGDKKTPEGVFNAMFAFGLKDNP 112 Query: 107 ---IGWNNL--------NPNSKYF---------------------------LSINIGFPN 128 + + + + NS Y+ ++ + + N Sbjct: 113 GSILDYRKIGDGDYWVDDSNSAYYNKWVNISNVNKDWNSAENLKSASPFYNYALALNY-N 171 Query: 129 EFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAIV 167 + G+ + IH + +SAGC + + M+++ V Sbjct: 172 TE-AVPGK-GSAIFIHCTKTDNDTSSAGCIRIPEEYMKKLVQTV 213 >gi|167630552|ref|YP_001681051.1| erfk/ybis/ycfs/ynhg [Heliobacterium modesticaldum Ice1] gi|167593292|gb|ABZ85040.1| erfk/ybis/ycfs/ynhg [Heliobacterium modesticaldum Ice1] Length = 307 Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 39/208 (18%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 GC S + P+ N +K ++P + + ++N L + + Sbjct: 82 GCVSSST-WLALSPPVMTNQPAEPRKPPSAPVGVITLVVELDKNTLSVLIDGN-----VY 135 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP-NSKYFLSINIGFPNEFDKAHNR 136 K Y + D +P G + I + + + P Sbjct: 136 KTYPVATGKR---------DTPSPVGEWRIVDKQKHWGDGFGSRWLGFNVP------WGI 180 Query: 137 TGADLMIHGE--CASAG------CYAMNNKQMQEIYAIV--RDSLRGNMQSHIQI--QAF 184 G IHG S G C+ M+N+ ++E++ + R +R +++ A+ Sbjct: 181 YG----IHGTNKPWSVGKSVSGGCFRMHNRDVEELFEWIPLRTVVRVIDSQKVKLSKSAY 236 Query: 185 PFRMTSKNMQLYQNN-PNYSFWNMLKLG 211 MT + + Q F L G Sbjct: 237 KIGMTGQEVARIQFRLQEKGFSPGLADG 264 >gi|89099360|ref|ZP_01172237.1| hypothetical protein B14911_22317 [Bacillus sp. NRRL B-14911] gi|89085969|gb|EAR65093.1| hypothetical protein B14911_22317 [Bacillus sp. NRRL B-14911] Length = 170 Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I + L + K + L K Y + Q P G Y I Sbjct: 61 PYSISITLSTRRLSLLKNGI-----LQKTYPVGIGKMLT---------QTPPGDYVIVNR 106 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + ++ G + HG S GC MNN+ + E Sbjct: 107 EPNPGGPFGI-MWLS--------LSKAGYGI--HGTNNPASIGKAVSKGCVRMNNQDVLE 155 Query: 163 IYAIVRDSLR 172 + IV + R Sbjct: 156 LSGIVPNGTR 165 >gi|323701623|ref|ZP_08113295.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans DSM 574] gi|323533396|gb|EGB23263.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans DSM 574] Length = 193 Score = 48.8 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 28/99 (28%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS-KYFLSINIGFPNEFDKA 133 L+K Y I P P G Y + +NP + + P Sbjct: 29 QLIKTYPIAVGK-PATP--------TPAGDYQVINKVVNPGGVLGTRWMGLNIP------ 73 Query: 134 HNRTGADLMIHGECA--------SAGCYAMNNKQMQEIY 164 G + IHG S GC M+N ++E++ Sbjct: 74 ----GGNYGIHGTNNPSSIGNRVSLGCIRMHNSHVEELF 108 >gi|78042988|ref|YP_359059.1| ErfK/YbiS/YcfS/YnhG family protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995103|gb|ABB14002.1| ErfK/YbiS/YcfS/YnhG family protein [Carboxydothermus hydrogenoformans Z-2901] Length = 143 Score = 48.8 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 32/107 (29%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN-----IGFPNE 129 +K + + P P G Y I NP + + + P Sbjct: 46 QKIKSWPVAVG-APSTP--------TPTGIYRIKNKISNPGGSPYGVLGSRWMGLTIP-- 94 Query: 130 FDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G + IHG S GC M NK ++E++ V Sbjct: 95 --------GGNYGIHGTNNPASIGREVSRGCIRMLNKDIEELFPQVP 133 >gi|258513554|ref|YP_003189776.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans DSM 771] gi|257777259|gb|ACV61153.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans DSM 771] Length = 175 Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 19/77 (24%) Query: 100 APEGFYYIGWNNLNPNSK-YFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SA 150 P G Y + +NP + + P G IHG S Sbjct: 39 TPTGNYSVVNKIINPGGMLGTRWLGLNIP----------GGVYGIHGTNNPDSIGKAVSN 88 Query: 151 GCYAMNNKQMQEIYAIV 167 GC M N+ ++EI+ + Sbjct: 89 GCIRMQNQDIEEIFPYI 105 >gi|225028593|ref|ZP_03717785.1| hypothetical protein EUBHAL_02872 [Eubacterium hallii DSM 3353] gi|224954075|gb|EEG35284.1| hypothetical protein EUBHAL_02872 [Eubacterium hallii DSM 3353] Length = 248 Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 58/209 (27%), Gaps = 59/209 (28%) Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF-----KNENILEIWK 67 I L A + + ++ IF K++ + ++ Sbjct: 34 AIPLQAATAKSQSTTVANRSKVKKDKWTTLLQKYEKSKKVNQLIFVKYKGKSKANIVLY- 92 Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN---NLNPNSK------- 117 V+ ++ + G K GD++ P G Y NP SK Sbjct: 93 EKVNGKFKKVFGCIGYVGKNGIG-KKREGDKKTPTGTYSFTKAFGIKKNPRSKIKYIKLN 151 Query: 118 ------------------------------------YFLSINIGFPNEFDKAHNRTGADL 141 Y ++ I + N+ + G+ + Sbjct: 152 KYHYWSGDRRYYNQMIDIRKVKASRSGEHLIDYKPHYNYALAIDY-NKNCVY--KKGSAI 208 Query: 142 MIHGECA---SAGCYAMNNKQMQEIYAIV 167 +H + + GC A+ K M++I V Sbjct: 209 FLHCTGSNPYTGGCVAVKQKYMKKIMQTV 237 >gi|312127038|ref|YP_003991912.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor hydrothermalis 108] gi|311777057|gb|ADQ06543.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor hydrothermalis 108] Length = 223 Score = 48.4 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 41/171 (23%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 +P +I + +++ L ++K + L K Y I P P G + I Sbjct: 32 NPYLIYVSIDDSRLYVFKEGI-----LYKSYPISPGK-PSTP--------TPVGTFKIIS 77 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQ 161 + + + + + G IHG S GC M NK ++ Sbjct: 78 KDYWGEGFGGRWMGLN------VRYGKYG----IHGTIYESYIGAHVSKGCVRMLNKDVK 127 Query: 162 EIYAIVR--------DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 E+++ + G ++ + +P M + + F Sbjct: 128 ELFSYIPIGTTVIISQGEYGEFRNGFRT-IYPGDTGEDVMAVQRRLKELGF 177 >gi|169831666|ref|YP_001717648.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis audaxviator MP104C] gi|169638510|gb|ACA60016.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis audaxviator MP104C] Length = 307 Score = 48.4 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 42/158 (26%), Gaps = 49/158 (31%) Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83 S K PL P I I + L + + K++ Sbjct: 107 STPVKTSEPLPP------------PTGEVEIIIDVQKRTLTVMENGY-----PYKQFPCA 149 Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDKAHNRTGAD 140 P G + I N + + +L +NI G Sbjct: 150 VGKNET---------PTPVGNWSIRRKARNWGTGFGTRWLGLNID--------WGIYG-- 190 Query: 141 LMIHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170 IHG S GC M N+ ++E++ V Sbjct: 191 --IHGTNKPYSIGTRASHGCIRMFNRHVEELFPWVEAG 226 >gi|226096828|dbj|BAH45270.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 474 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 41/135 (30%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 +PF P +++ + + L++ + L++ Y + PEG+Y Sbjct: 325 VAPFEPLQLQLTTSTHTLKLISGS-----HLVRSYPVAIGKND----------STPEGYY 369 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG-----ADLMIHGEC--------ASAGC 152 I I P D + G +HG S GC Sbjct: 370 TIQQK-------------INQPRGHDNIYGTRGMVFQENGYALHGTNHPESIGSSVSLGC 416 Query: 153 YAMNNKQMQEIYAIV 167 + N ++E+Y+ V Sbjct: 417 VRLYNAAVEELYSFV 431 >gi|312112233|ref|YP_003990549.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1] gi|311217334|gb|ADP75938.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1] Length = 111 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 42/130 (32%), Gaps = 35/130 (26%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I N++ L+++ + L+K Y I P P G Y I N Sbjct: 5 IDISTNKHQLKLYDGH-----RLIKVYPIAVGKM-LTP--------TPSGIYTIINKQRN 50 Query: 114 PNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIY 164 P + L + + R + HG S GC M N + E+ Sbjct: 51 PGGAFGVLWLGLS----------RPHYGI--HGTNNPSSIGKNVSRGCIRMYNHDVIELS 98 Query: 165 AIVRDSLRGN 174 ++V R Sbjct: 99 SMVPVGTRVY 108 >gi|291532676|emb|CBL05789.1| Uncharacterized protein conserved in bacteria [Megamonas hypermegale ART12/1] Length = 395 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 65/216 (30%), Gaps = 37/216 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M LL + N ++++ E + +Q I I Sbjct: 1 MKKFIVFLLLGVMFVFNTVAYAQAENTAQEKIGGADKATDIQVNNNVNTVKRWILINIPA 60 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 L ++ + ++ Y + KIET + P GFY + +NP Sbjct: 61 RSLRLYDND-----KCIEMYPVGVG------KIET---KTPVGFYKVVEKIVNPTWTDPA 106 Query: 121 SINIGFPNEFDKAHNRT----GADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV- 167 +++ P+ D G + IHG S GC M +++++ V Sbjct: 107 DVSVVIPSGEDNPLGYRWIGIGGNYGIHGTNRPDSVGHYVSNGCVRMVEADVEKVFDKVD 166 Query: 168 ----------RDSLRGNMQSHIQIQAFPFRMTSKNM 193 R + + +P +N+ Sbjct: 167 VGTEVQIIYNRLVIDKTFDGRVAYYIYPDGYDMQNL 202 >gi|269926314|ref|YP_003322937.1| ErfK/YbiS/YcfS/YnhG family protein [Thermobaculum terrenum ATCC BAA-798] gi|269789974|gb|ACZ42115.1| ErfK/YbiS/YcfS/YnhG family protein [Thermobaculum terrenum ATCC BAA-798] Length = 616 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 54/153 (35%), Gaps = 25/153 (16%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY--VLLKEYKICAWSGTFG 90 +S LI+S + + I KN L + + N ++ ++KE + + Sbjct: 14 ISAGLILSYINTSQASGDEYYLVIVKNRQRLYLARGNPESPLWSDVIKEIPVATGALW-- 71 Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYF------------LSINIGFPNEF-DKAHNRT 137 + G + P G++ + + PN + + + PN H Sbjct: 72 --TQKG-LETPSGYFKVIEKSNRPNQGGYDFSDTGDVVLTPYFMRLAIPNRGGIGIHTYK 128 Query: 138 GAD--LM---IHGECASAGCYAMNNKQMQEIYA 165 G + + G ++ GC A +Q++Y Sbjct: 129 GYTLKIWRFGVPGGESTHGCIAGPPNDIQDLYK 161 >gi|149198883|ref|ZP_01875925.1| tonB-dependent receptor protein [Lentisphaera araneosa HTCC2155] gi|149138081|gb|EDM26492.1| tonB-dependent receptor protein [Lentisphaera araneosa HTCC2155] Length = 325 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 33/113 (29%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEFDKA 133 L + Y I D + P G ++I P+ K + G P N Sbjct: 219 KLFRFYNIGIGK----------DNRTPFGEFFISGKKREPSWKGY---PFGHPENVLGTR 265 Query: 134 HNR---------TGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRD 169 R G + HG +S GC M N+ ++E++ + D Sbjct: 266 WMRLTKISDGSNEGYGI--HGTSEPESIGTASSLGCIRMRNEDVEELFNFIPD 316 >gi|170288938|ref|YP_001739176.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga sp. RQ2] gi|170176441|gb|ACB09493.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga sp. RQ2] Length = 382 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 46/149 (30%), Gaps = 39/149 (26%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 +P I + + L ++ VLLK Y + P G Y+I Sbjct: 247 RENPVTIVVNLFSSKLALYYDG-----VLLKVYPVALGRSDT----------TPPGRYWI 291 Query: 108 GWNNLNPNSKYFL----------SINIGF-----PNEFDKAHNRTGADLMIHGECASAGC 152 ++P +F + + P ++ G+ S GC Sbjct: 292 LRKEIDPALYWFGEYISPRTPLNGLGTRYLQLSNPTYAIHGTSKP----WEIGKRISHGC 347 Query: 153 YAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181 M N+ ++EI D+ G + + Sbjct: 348 IRMFNRDVEEI-----DAFAGVGTEVVVV 371 >gi|296131671|ref|YP_003638918.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR] gi|296030249|gb|ADG81017.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR] Length = 126 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 33/132 (25%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + +IR+ +L + + N + Y + P P G Sbjct: 9 DEPLYSNILIRVDVTNRLLYLERGNRTTQI-----YPVAVGK-PSTP--------TPPGT 54 Query: 105 YYIGWNNLNPNS-KYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAM 155 Y I +NP + + P+ IHG S GC M Sbjct: 55 YSIIEKTVNPGGILGTRWMGLDIPD----------GPYGIHGTWNRDSIGKAVSNGCIRM 104 Query: 156 NNKQMQEIYAIV 167 N+ ++E++ V Sbjct: 105 YNEDVEEVFRQV 116 >gi|326386917|ref|ZP_08208531.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370] gi|326208597|gb|EGD59400.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium nitrogenifigens DSM 19370] Length = 243 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 28/124 (22%) Query: 51 PTVIRIFKNENILEIWKRNVD-AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 P VI + +L +++ + +LK Y GD+ P G + I Sbjct: 113 PLVITVDLAARVLSVFENGHEVGATAILKGY---------------GDKPTPIGVFPITQ 157 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA-----SAGCYAMNNKQMQEIY 164 + + S + + P + T + IHG + GC + + ++++ Sbjct: 158 KDAHHVSNLYDA-----PMPWMMRL--TNDGVSIHGSKVERGYATNGCIGVPDAFAEKLF 210 Query: 165 AIVR 168 + + Sbjct: 211 RLAK 214 >gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobacillus kaustophilus HTA426] gi|56381657|dbj|BAD77565.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 165 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 40/128 (31%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I + L + R ++ Y I P G + I Sbjct: 56 PYTIHISISRRQLTLKHRGRT-----IRTYPIGVGKMVTA---------TPVGDFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + + G IHG S GC M+NK + E Sbjct: 102 QPNPGGPF-GAMWLS------LSKVHYG----IHGTNDPSSIGKYVSKGCIRMHNKDVLE 150 Query: 163 IYAIVRDS 170 + +IV + Sbjct: 151 LASIVPNG 158 >gi|317122862|ref|YP_004102865.1| ErfK/YbiS/YcfS/YnhG family protein [Thermaerobacter marianensis DSM 12885] gi|315592842|gb|ADU52138.1| ErfK/YbiS/YcfS/YnhG family protein [Thermaerobacter marianensis DSM 12885] Length = 260 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 33/135 (24%) Query: 43 KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102 + + +I I ++ L +++ ++ Y I A E +P Sbjct: 65 RSAVAAAEDVLIVIDIDQRELTVYRNG-----QPVRTYPIAAGRPG---------EPSPV 110 Query: 103 GFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCY 153 G + + P + + P G IHG S GC Sbjct: 111 GEWRVTDIAHWPGGPFGARWFGLSAP------WGSYG----IHGTNNPGSIGTYASLGCI 160 Query: 154 AMNNKQMQEIYAIVR 168 M N+ + + +V+ Sbjct: 161 RMFNEDVLTLDDLVK 175 >gi|86749621|ref|YP_486117.1| hypothetical protein RPB_2501 [Rhodopseudomonas palustris HaA2] gi|86572649|gb|ABD07206.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2] Length = 588 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 41/142 (28%), Gaps = 25/142 (17%) Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78 + + + L ++K P P VI + + + ++ N Sbjct: 82 AQPAPKRYQRKQPHLDTRQQKLIEKPTAKPQGPLVIAVSIEQQKMRVYDANG-----FFA 136 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG 138 E I G G P G + + N S + + + T Sbjct: 137 EAPIST--GMRGH-------ATPMGVFSVIQKNKWHRSNIYSGAPMPY------MQRLTW 181 Query: 139 ADLMIH-----GECASAGCYAM 155 + + +H G AS GC M Sbjct: 182 SGIALHAGVVPGYPASHGCIRM 203 >gi|291614448|ref|YP_003524605.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus ES-1] gi|291584560|gb|ADE12218.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus ES-1] Length = 159 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 45/156 (28%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN-- 111 I I E LE++ D + L+ Y++ + G E G P G + I Sbjct: 3 IAIHIPEQTLELF----DDDGKPLRRYRVSTGANGVGE--ENGSFCTPRGKHVIRARIGA 56 Query: 112 -LNPNSKYFLSINIG--FPNEFDKAH--------------------NRTGA------DLM 142 N+ + G + E + NR+G+ + Sbjct: 57 GQPENTVFVKRRPTGEIYTPELGRQQPGRDWILTRILWLSGCESGYNRSGSCDTMRRYIY 116 Query: 143 IHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170 IHG S GC M N M E++ +V+ Sbjct: 117 IHGTPDGTALGKPGSHGCIRMRNADMVELFELVKTG 152 >gi|307826415|ref|ZP_07656615.1| hypothetical protein MettuDRAFT_4462 [Methylobacter tundripaludum SV96] gi|307732533|gb|EFO03410.1| hypothetical protein MettuDRAFT_4462 [Methylobacter tundripaludum SV96] Length = 138 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGAD 140 Y I LNPNS Y LS+ + +PN FD H R G Sbjct: 97 YRIV--ELNPNSHYHLSMKLNYPNGFDLLHARQGGG 130 >gi|299535205|ref|ZP_07048529.1| spore protein ykuD-like protein [Lysinibacillus fusiformis ZC1] gi|298729326|gb|EFI69877.1| spore protein ykuD-like protein [Lysinibacillus fusiformis ZC1] Length = 164 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 45/129 (34%), Gaps = 39/129 (30%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I N L ++K N+ L K+Y I + P G + I Sbjct: 55 PYHIEISTNNRWLRLYKNNI-----LQKQYPIAVGRML---------HETPVGSFIIINK 100 Query: 111 NLNPNSKY---FLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQ 159 NP + ++S+ + G IHG S GC M N+ Sbjct: 101 APNPGGPFGTMWMSL----------SKEHYG----IHGTNDPSSIGHAVSHGCIRMQNRD 146 Query: 160 MQEIYAIVR 168 ++E+ +IV Sbjct: 147 VEELASIVP 155 >gi|126649562|ref|ZP_01721803.1| hypothetical protein BB14905_06478 [Bacillus sp. B14905] gi|126593887|gb|EAZ87810.1| hypothetical protein BB14905_06478 [Bacillus sp. B14905] Length = 143 Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 33/126 (26%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I L +++ N+ L K+Y I + P G + I Sbjct: 34 PYRIEISTENRWLRLYRNNI-----LQKQYPIAVGRML---------HETPVGSFIIINK 79 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 + NP + ++ + + G IHG S GC M N+ ++E Sbjct: 80 DPNPGGPF-GTMWMS------LSKEHYG----IHGTNDPSSIGHAVSHGCIRMQNQDVEE 128 Query: 163 IYAIVR 168 + +IV Sbjct: 129 LASIVP 134 >gi|91977411|ref|YP_570070.1| hypothetical protein RPD_2942 [Rhodopseudomonas palustris BisB5] gi|91683867|gb|ABE40169.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5] Length = 575 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 33/182 (18%) Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVL 76 + + H L ++K+ T P P +I + ++ L ++ N L Sbjct: 64 APAQPPQKRYPRKHHQLDSRQEKLIEKQATKPQGPLLISVSIDQQKLRVYDANG-----L 118 Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR 136 L E + + + P G + + N S + + + Sbjct: 119 LAESPVSTGTRS---------HATPMGVFSVIQKNKWHRSNIYSGAPMPY------MQRI 163 Query: 137 TGADL-----MIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSK 191 T + + M+ G AS GC M +++ R R + P +T Sbjct: 164 TWSGIALHAGMVPGYPASHGCIRMPTAFATKMWGWTRMGAR--------VIVTPGDITPT 215 Query: 192 NM 193 N Sbjct: 216 NF 217 >gi|121534863|ref|ZP_01666682.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans Nor1] gi|121306462|gb|EAX47385.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans Nor1] Length = 211 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 21/142 (14%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 +A +S + + S I I K + L +++ N +++ + Sbjct: 79 QAAEKISVDPAPQPPARGKSSLSRPHILITKAKRQLTLFESNT-----PFRQWPVAIGK- 132 Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNS-KYFLSINIGFPNEFDKAHNRTGADL-MIHG 145 P P G + I +NP + + D ++ G + + G Sbjct: 133 PHTP--------TPVGNFAIAAKIMNPGGVLGTRWMGLN----HD-SYGIHGTNAPWLIG 179 Query: 146 ECASAGCYAMNNKQMQEIYAIV 167 + S GC M+N +E++A++ Sbjct: 180 QMVSNGCIRMHNPHAEELFALI 201 >gi|312135699|ref|YP_004003037.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor owensensis OL] gi|311775750|gb|ADQ05237.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor owensensis OL] Length = 223 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 41/169 (24%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 +I + +++ L ++K + L K Y I P P G + I + Sbjct: 34 YLIYVSIDDSRLYVFKEGI-----LYKSYPISPGK-PSTP--------TPVGTFKIISKD 79 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEI 163 + + + + G IHG S GC M NK ++E+ Sbjct: 80 YWGEGFGGRWMGLN------VRYGKYG----IHGTIYESYIGAHVSKGCVRMLNKDVKEL 129 Query: 164 YAIVR--------DSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 ++ + + + G ++ + +P M + + F Sbjct: 130 FSYIPIGTTVVISEGIYGEFRNGFRT-IYPGDTGEDVMAVQKRLKELGF 177 >gi|330838933|ref|YP_004413513.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC 35185] gi|329746697|gb|AEC00054.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC 35185] Length = 409 Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 51/200 (25%), Gaps = 56/200 (28%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDK--------------AEHPLSENLIIS--MQKKRT 46 + F +G +K AE P E + S Sbjct: 2 FKQIAAFFVCLSMFSGVSGWAGATEKEQGSSYGAWVKDISAESPEPEKVHASEVKSAAAE 61 Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 P I I L ++K N ++ Y + + P G++ Sbjct: 62 KTGDPYKIIINVAARSLGVYKNN-----EKIRLYPVGLGKLST---------PTPVGYFS 107 Query: 107 IGWNNLNPN-----------SKYFLSINIGFPNEFDKAHNRTGADLMIHGEC-------- 147 + NP + +G+ + + G IHG Sbjct: 108 VLTKEENPTWVDPGDSKNTIPSGEGN-PLGY--RWMQVWGNYG----IHGTNHPESIGSY 160 Query: 148 ASAGCYAMNNKQMQEIYAIV 167 S GC M ++E+Y Sbjct: 161 VSNGCIRMKEADVEEVYDYA 180 >gi|281412542|ref|YP_003346621.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga naphthophila RKU-10] gi|281373645|gb|ADA67207.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga naphthophila RKU-10] Length = 382 Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 46/149 (30%), Gaps = 39/149 (26%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 +P I + + L ++ VLLK Y + P G Y++ Sbjct: 247 RENPVTIVVNLFSSKLALYYDG-----VLLKVYPVALGRSDA----------TPPGRYWV 291 Query: 108 GWNNLNPNSKYFL----------SINIGF-----PNEFDKAHNRTGADLMIHGECASAGC 152 ++P +F + + P ++ G+ S GC Sbjct: 292 LRKEIDPALYWFGEYISPRTPLNGLGTRYLQLSNPTYAIHGTSKP----WEIGKRISHGC 347 Query: 153 YAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181 M N+ ++EI D+ G + + Sbjct: 348 IRMFNRDVEEI-----DAFAGVGTEVVVV 371 >gi|284052766|ref|ZP_06382976.1| ErfK/YbiS/YcfS/YnhG [Arthrospira platensis str. Paraca] gi|291565859|dbj|BAI88131.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 208 Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 45/173 (26%), Gaps = 32/173 (18%) Query: 16 LNGCHHSRSLIDK---AEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 L+ + + + S P + + E + +++ Sbjct: 43 LSASASAPRIYPYQSILNPDVPPLDDPSQFLPIGEQQAPVKVVLRLGERRVYVYRGESQ- 101 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKYFLSINIGFPN-- 128 + Y + + P G + + NP + + + PN Sbjct: 102 ----IASYPVAVGKPG---------WETPTGTFQVTEKVENPQWENPWTGEVRPAGPNSA 148 Query: 129 ---EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170 + + + HG AS GC M N+ + ++ V Sbjct: 149 LGLRWIGFWHDGKDAIGFHGTPTVNSIGQAASHGCVRMRNEDIVALFEKVEMG 201 >gi|261420721|ref|YP_003254403.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61] gi|319768391|ref|YP_004133892.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52] gi|261377178|gb|ACX79921.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61] gi|317113257|gb|ADU95749.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52] Length = 165 Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I + L + R ++ Y I P G + I Sbjct: 56 PYTIHISISRRQLTLKHRGRT-----IRTYPIGVGKMVTA---------TPVGDFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + ++ + HG S GC M+NK + E Sbjct: 102 QPNPGGPF-GAMWLS--------LSKLHYGI--HGTNDPSSIGKYVSKGCIRMHNKDVLE 150 Query: 163 IYAIVRDS 170 + +IV + Sbjct: 151 LASIVPNG 158 >gi|192291819|ref|YP_001992424.1| hypothetical protein Rpal_3448 [Rhodopseudomonas palustris TIE-1] gi|192285568|gb|ACF01949.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris TIE-1] Length = 537 Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 25/128 (19%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 L ++K+ T P P VI + + L ++ N L E + G G Sbjct: 84 LDHKAEKQIEKQATKPQGPVVIAVSIEQQKLRVYDANG-----LFAETPVST--GMRGH- 135 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GEC 147 P G + + + S + + + T + + +H G Sbjct: 136 ------STPMGVFSVIQKSKYHRSNIYSGAPMPY------MQRITWSGIALHAGALPGYP 183 Query: 148 ASAGCYAM 155 AS GC M Sbjct: 184 ASHGCIRM 191 >gi|39936101|ref|NP_948377.1| hypothetical protein RPA3038 [Rhodopseudomonas palustris CGA009] gi|39649955|emb|CAE28479.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009] Length = 537 Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 25/128 (19%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 L ++K+ T P P VI + + L ++ N L E + G G Sbjct: 84 LDHKAEKQIEKQATKPQGPVVIAVSIEQQKLRVYDANG-----LFAETPVST--GMRGH- 135 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GEC 147 P G + + + S + + + T + + +H G Sbjct: 136 ------STPMGVFSVIQKSKYHRSNIYSGAPMPY------MQRITWSGIALHAGALPGYP 183 Query: 148 ASAGCYAM 155 AS GC M Sbjct: 184 ASHGCIRM 191 >gi|297531502|ref|YP_003672777.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3] gi|297254754|gb|ADI28200.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3] Length = 165 Score = 47.2 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 40/128 (31%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I + L + R ++ Y I P G + I Sbjct: 56 PYTIHISISRRQLTLKHRGRT-----IRTYPIGVGKMVTA---------TPVGDFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + + G IHG S GC M+NK + E Sbjct: 102 QPNPGGPF-GAMWLS------LSKIHYG----IHGTNDPSSIGKYVSKGCIRMHNKDVLE 150 Query: 163 IYAIVRDS 170 + +IV + Sbjct: 151 LASIVPNG 158 >gi|295401784|ref|ZP_06811749.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976151|gb|EFG51764.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius C56-YS93] Length = 111 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 41/130 (31%), Gaps = 35/130 (26%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I N+ L+++ + L+K Y I P P G Y I N Sbjct: 5 IDISTNKYQLKLYDGH-----RLIKVYPIAVGKM-LTP--------TPSGIYTIINKQRN 50 Query: 114 PNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIY 164 P + L + + R + HG S GC M N + E+ Sbjct: 51 PGGAFGVLWLGLS----------RPHYGI--HGTNNPSSIGKNVSRGCIRMYNHDVIELS 98 Query: 165 AIVRDSLRGN 174 ++V R Sbjct: 99 SMVPVGTRVY 108 >gi|328952431|ref|YP_004369765.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM 11109] gi|328452755|gb|AEB08584.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM 11109] Length = 314 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 42/166 (25%) Query: 26 IDKAEHPLSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICA 84 D P+ +++ P HP I + E L + N + + Y I Sbjct: 80 WDPFLPPVGAEIVVPTTW--IVPDHPEHPIIVNTGEMRLYFFTDN----FTKVITYPIGM 133 Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNP--------NSKYFLSINIGFP-NEFDK--- 132 D + P G + + NP +KY +S+ P N K Sbjct: 134 GVL---------DFKTPTGVFKVTEKKTNPPWFVPKTLQAKYGMSVMESGPDNPLGKYKL 184 Query: 133 --AHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168 + G IHG S GC M + +++++ +V+ Sbjct: 185 TLSWGDYG----IHGTSQPFGVGRLVSHGCTRMYPEHIEKLFPLVK 226 >gi|311029721|ref|ZP_07707811.1| hypothetical protein Bm3-1_04054 [Bacillus sp. m3-13] Length = 166 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I L + +++K Y I + P G Y I Sbjct: 56 PYSIEISITNRKLVL-----KGNGIIIKTYPIAVGRM-----LFE----TPVGNYVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + ++ + HG S GC M N+ + + Sbjct: 102 QPNPGGPF-GAMWLS--------LSKLSYGI--HGTNDPSSIGKAVSRGCVRMYNQDVLQ 150 Query: 163 IYAIVRDS 170 + ++V + Sbjct: 151 LASMVPNG 158 >gi|149180623|ref|ZP_01859127.1| hypothetical protein BSG1_16740 [Bacillus sp. SG-1] gi|148851776|gb|EDL65922.1| hypothetical protein BSG1_16740 [Bacillus sp. SG-1] Length = 165 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 37/121 (30%), Gaps = 33/121 (27%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + ++ L + + ++K Y I P G Y I Sbjct: 56 PLSIHVSTSQRKLTLQRNGT-----VVKTYPIAVGKMLSA---------TPVGQYVIINK 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + ++ + + G IHG S GC M N ++E Sbjct: 102 APNPGGPF-GTMWMS------LSKKHYG----IHGTNNPASIGKAVSKGCIRMYNSDVEE 150 Query: 163 I 163 + Sbjct: 151 L 151 >gi|316933731|ref|YP_004108713.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris DX-1] gi|315601445|gb|ADU43980.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris DX-1] Length = 502 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 25/128 (19%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 L L ++K+ + P P VI + + L ++ N L E + G G Sbjct: 82 LDHQLEKQIEKQASKPQGPVVIAVSIEQQKLRVYDANG-----LFAETPVST--GMRGH- 133 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GEC 147 P G + + N S + + + T + + +H G Sbjct: 134 ------ATPLGVFSVIQKNKYHRSNIYSGAPMPY------MQRITWSGIALHAGALPGYP 181 Query: 148 ASAGCYAM 155 AS GC M Sbjct: 182 ASHGCIRM 189 >gi|315646099|ref|ZP_07899219.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453] gi|315278298|gb|EFU41614.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453] Length = 146 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 32/133 (24%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I I K+ N L +++ ++K + + PEG + I Sbjct: 20 FIVIDKSTNKLTYYEKG-----KVIKTFPVATGKKPS---------YTPEGLFKIHEKVK 65 Query: 113 NPNSKYFLSINIGFP-NEF-DKAHN---RTGADL----MIHGECAS--------AGCYAM 155 N Y I G P N D+ + + IHG S AGC M Sbjct: 66 N-RPYYKEGIKGGDPRNPLGDRWLGINVKVNGRISYAYAIHGNNNSNSIGKYVSAGCIRM 124 Query: 156 NNKQMQEIYAIVR 168 +NK ++ +Y V+ Sbjct: 125 HNKDVRWLYDKVK 137 >gi|261855752|ref|YP_003263035.1| ErfK/YbiS/YcfS/YnhG family protein [Halothiobacillus neapolitanus c2] gi|261836221|gb|ACX95988.1| ErfK/YbiS/YcfS/YnhG family protein [Halothiobacillus neapolitanus c2] Length = 220 Score = 46.8 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 62/210 (29%), Gaps = 59/210 (28%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQK-----KRTSPFHPTVIRIFKNEN 61 +LL L +F G ++ + L +++ + ++ + I + ++ Sbjct: 13 VLLAGLLLFTAGFGAQAQAMNPSTTVLPTSVVTAQKQVHSLLMNSGAGDAPFIIVDASDQ 72 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY--- 118 L +++RN L + + + G G + P G + I + Sbjct: 73 KLYLFERN-----QLKLNFSVSTSAVGVG--SAEGSNRTPLGLHRIAEKFGDGEPIGMIF 125 Query: 119 --------------------------------FLSINIGFPNEFDKAHNRTGADLMIHGE 146 L I D +H R + IHG Sbjct: 126 KARRPTGQLADIQTKPIKGDGDDVTTRIMWLQGLQPGINEGKGVD-SHAR---YIYIHGT 181 Query: 147 --------CASAGCYAMNNKQMQEIYAIVR 168 S GC MNN Q+ E++ V Sbjct: 182 PEEGLIGRPESHGCIRMNNTQVIELFNQVP 211 >gi|186682714|ref|YP_001865910.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102] gi|186465166|gb|ACC80967.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102] Length = 182 Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 31/184 (16%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQ--KKRTSPFHPTVIRIFK 58 + + L+ + F G + +++ + + + H IR+ + Sbjct: 3 LKTKILFLITIIVCFTEGFLSGYFKKLSSNKAITQQSQSPPKIPPSKNNTTHKISIRVKR 62 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 + +++ +LK + I + P G Y + + NP K Sbjct: 63 GARQVYVYQDK-----QVLKSFPIAIGKSG---------WETPLGNYQVIYMKKNPIFKN 108 Query: 119 FLSINIGFP---NEFDKA----HNRTGADLMIHGEC--------ASAGCYAMNNKQMQEI 163 F + NI P N K + L HG S GC M NK + + Sbjct: 109 FKTGNIIMPGANNPLGKRVIVFKIYKKSHLAFHGTNQDKLIGKAVSHGCIRMLNKDVIAL 168 Query: 164 YAIV 167 Y +V Sbjct: 169 YELV 172 >gi|307941572|ref|ZP_07656927.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4] gi|307775180|gb|EFO34386.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4] Length = 413 Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 51/165 (30%), Gaps = 31/165 (18%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLS-----ENLIISMQKKRTSPFHPTVIR 55 MT+R+ + L + A PL ++ SP P + Sbjct: 1 MTSRFLRKTTGKLLLLGAVSLAFLAPAHA-APLPTLEEVKSKSEQKSDVAPSPNDPLHMV 59 Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 + +E L +++ L++ I SG G P G + I Sbjct: 60 VSLDEQKLSVYRGAN-----LVEVTPIS--SGKKGH-------STPTGVFSILEKRKRHF 105 Query: 116 SKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAM 155 S + + + + T + + +H G AS GC + Sbjct: 106 SNLYDNAPMPY------MQRLTWSGIALHEGRLPGYPASQGCVRL 144 >gi|295702406|ref|YP_003595481.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319] gi|294800065|gb|ADF37131.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319] Length = 177 Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 41/135 (30%), Gaps = 42/135 (31%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + I K N L + L K Y + P GF+ I N Sbjct: 37 LIINKKTNQLAYFHNG-----KLEKTYSVATGKTWSD---------TPVGFFKIVNKIKN 82 Query: 114 -PNSKYFLS------------INIGFPNEFDKAHNRTGADLMIHGECA--------SAGC 152 P ++ + + A+ TG IHG + S GC Sbjct: 83 RPYYTGHIAGGASNNPLGSRWLGLN-------ANGTTGDTYAIHGNNSEDSIGKYVSHGC 135 Query: 153 YAMNNKQMQEIYAIV 167 M+N ++E++ V Sbjct: 136 VRMHNADVEELFNKV 150 >gi|258514598|ref|YP_003190820.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans DSM 771] gi|257778303|gb|ACV62197.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans DSM 771] Length = 411 Score = 46.8 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 33/129 (25%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K N L ++ N L+K + + PEG + I +N Sbjct: 30 IIINKQNNKLAFYQNN-----QLVKIFPVATGREPS---------YTPEGSFKIINKIIN 75 Query: 114 PNSKYFLSINI--GFP-NEFDKAH---NRTGADLMIHGECA--------SAGCYAMNNKQ 159 P Y++ + I G P N N G IHG S GC M+N Sbjct: 76 P---YYIKLKIDGGAPDNPLGNRWMGLNAGGGTYGIHGNSNPASIGTYASGGCIRMSNND 132 Query: 160 MQEIYAIVR 168 + I+ R Sbjct: 133 V--IWLYER 139 >gi|326202623|ref|ZP_08192491.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM 2782] gi|325987207|gb|EGD48035.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM 2782] Length = 213 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 37/179 (20%) Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV--------IRIFKNENILE 64 + L +H+ S+ + L+ + + + + I + K +L Sbjct: 25 ALLLFQSNHNMSVTGTYDTATKNMLVQRLSSNKFAYLDNVIKAPTKGRWIAVNKTTRVLT 84 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYFLSIN 123 +++ +LK+Y + + K G Y + ++P+ + Sbjct: 85 LYEGK-----KVLKKYAVAVGNPATLTKS---------GKYVVNCKLIDPDWGGGGFAKP 130 Query: 124 I--GFP-NEFDKAH---NRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 + G P N NRT IHG + S GC M+N ++E+Y +V Sbjct: 131 VRGGTPQNPLGTRWMGINRTDGSYGIHGTNSFYSIGKYISHGCMRMSNYCVEELYPLVP 189 >gi|169825867|ref|YP_001696025.1| spore protein ykuD-like protein [Lysinibacillus sphaericus C3-41] gi|168990355|gb|ACA37895.1| Spore protein ykuD-like protein [Lysinibacillus sphaericus C3-41] Length = 164 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 33/126 (26%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I L +++ ++ L K+Y I + P G + I Sbjct: 55 PYRIEISTENRWLRLYRNSI-----LQKQYPIAVGRML---------HETPVGSFIIINK 100 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 + NP + ++ + + G IHG S GC M N ++E Sbjct: 101 DPNPGGPF-GTMWMS------LSKEHYG----IHGTNDPSSIGHAVSHGCIRMQNPDVEE 149 Query: 163 IYAIVR 168 + +IV Sbjct: 150 LASIVP 155 >gi|49087046|gb|AAT51409.1| PA0732 [synthetic construct] Length = 348 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 31/177 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQK------KRTSPFHPTVI 54 M +LL A + + + + SM+ SP P I Sbjct: 1 MKRSLAVLLLAFAVGSLHAAPASPANAPLPPADIKARLKSMKPGEYLWYPEVSPQGPVTI 60 Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 + E I++ + I + + G K P G + I +++ Sbjct: 61 VVSLTEQKAYIYRNGIA----------IGVSTLSSGKKGRE----TPTGVFSILQKSVDH 106 Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAI 166 S + S + + T + +H G AS GC + +++Y I Sbjct: 107 KSDLYNSAPMPY------MQRLTWDGIALHAGNLPGYPASHGCIRLPMAFAKKLYGI 157 >gi|313105548|ref|ZP_07791816.1| hypothetical protein PA39016_000060021 [Pseudomonas aeruginosa 39016] gi|310878318|gb|EFQ36912.1| hypothetical protein PA39016_000060021 [Pseudomonas aeruginosa 39016] Length = 354 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 31/177 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQK------KRTSPFHPTVI 54 M +LL A + + + + SM+ SP P I Sbjct: 8 MKRSLAVLLLAFAVGSLHAAPASPANAPLPPADIKARLKSMKPGEYLWYPEVSPQGPVTI 67 Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 + E I++ + I + + G K P G + I +++ Sbjct: 68 VVSLTEQKAYIYRNGIA----------IGVSTLSSGKKGRE----TPTGVFSILQKSVDH 113 Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAI 166 S + S + + T + +H G AS GC + +++Y I Sbjct: 114 KSDLYNSAPMPY------MQRLTWDGIALHAGNLPGYPASHGCIRLPMAFAKKLYGI 164 >gi|222099847|ref|YP_002534415.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga neapolitana DSM 4359] gi|221572237|gb|ACM23049.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga neapolitana DSM 4359] Length = 375 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 39/159 (24%) Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 + + +P I + + L ++ VLLK Y + Sbjct: 230 QVLKIGRVIFRENPVTIVVNLFSSKLGLYYDG-----VLLKVYPVALGRSDA-------- 276 Query: 98 EQAPEGFYYIGWNNLNPNSKYFL----------SINIGF-----PNEFDKAHNRTGADLM 142 P G Y+I ++P +F + + P ++ Sbjct: 277 --TPPGRYWILRKEIDPALYWFGEYISPRTPLNGLGTRYLQLSNPTYAIHGTSKP----W 330 Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQI 181 G+ S GC M N+ ++E+ D+ G I + Sbjct: 331 EIGKRISHGCIRMFNRDVEEL-----DAFAGVGTEVIVV 364 >gi|239828519|ref|YP_002951143.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70] gi|239808812|gb|ACS25877.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70] Length = 165 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 39/128 (30%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I + L + R ++ Y I P G + I Sbjct: 56 PYTIHISISRRQLTLKHRGRT-----IRTYPIGVGKMVTA---------TPVGDFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + + G IHG S GC M+NK + E Sbjct: 102 QPNPGGPF-GAMWLS------LSKVHYG----IHGTNDPSSIGKYVSKGCIRMHNKDVLE 150 Query: 163 IYAIVRDS 170 +IV + Sbjct: 151 FASIVPNG 158 >gi|15595929|ref|NP_249423.1| hypothetical protein PA0732 [Pseudomonas aeruginosa PAO1] gi|107100190|ref|ZP_01364108.1| hypothetical protein PaerPA_01001213 [Pseudomonas aeruginosa PACS2] gi|218893325|ref|YP_002442194.1| hypothetical protein PLES_46131 [Pseudomonas aeruginosa LESB58] gi|254239094|ref|ZP_04932417.1| hypothetical protein PACG_05276 [Pseudomonas aeruginosa C3719] gi|254244987|ref|ZP_04938309.1| hypothetical protein PA2G_05866 [Pseudomonas aeruginosa 2192] gi|9946617|gb|AAG04121.1|AE004508_6 hypothetical protein PA0732 [Pseudomonas aeruginosa PAO1] gi|126171025|gb|EAZ56536.1| hypothetical protein PACG_05276 [Pseudomonas aeruginosa C3719] gi|126198365|gb|EAZ62428.1| hypothetical protein PA2G_05866 [Pseudomonas aeruginosa 2192] gi|218773553|emb|CAW29367.1| hypothetical protein PLES_46131 [Pseudomonas aeruginosa LESB58] Length = 347 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 31/177 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQK------KRTSPFHPTVI 54 M +LL A + + + + SM+ SP P I Sbjct: 1 MKRSLAVLLLAFAVGSLHAAPASPANAPLPPADIKARLKSMKPGEYLWYPEVSPQGPVTI 60 Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 + E I++ + I + + G K P G + I +++ Sbjct: 61 VVSLTEQKAYIYRNGIA----------IGVSTLSSGKKGRE----TPTGVFSILQKSVDH 106 Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAI 166 S + S + + T + +H G AS GC + +++Y I Sbjct: 107 KSDLYNSAPMPY------MQRLTWDGIALHAGNLPGYPASHGCIRLPMAFAKKLYGI 157 >gi|220929989|ref|YP_002506898.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10] gi|220000317|gb|ACL76918.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10] Length = 307 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 37/179 (20%) Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV--------IRIFKNENILE 64 + L +H+ S+ + L+ + + + + K +L Sbjct: 115 ALLLFQSNHNMSVTGAYDTATKNMLVQRLSSNKFVYLDKVTKAPTKGKWVTVNKTTRVLT 174 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-SKYFLSIN 123 +++ +LK+Y + + K G + + NP+ + Sbjct: 175 LYEGT-----KVLKKYAVAVGNPASLTKS---------GKFIVTSKLKNPDWGGGGFADP 220 Query: 124 I--GFP-NEFDKAH---NRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 + G P N NRT IHG + S GC M+N ++E++ +V Sbjct: 221 VKGGTPQNPLGTRWLGINRTDGSYGIHGTNSFYSIGKYISHGCMRMSNHCVEELFPLVP 279 >gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Synechococcus elongatus PCC 6301] gi|56685848|dbj|BAD79070.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 208 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 60/190 (31%), Gaps = 34/190 (17%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEH-----PLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 LL+ + + C + L + + + +P T + + + Sbjct: 33 LLWNSSLLVACCAIASPLAAIPIPPPATMAVPAIPVEATIAPPPAPAPTTKLVLSLRQRR 92 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKYFL 120 + +++ + + Y + G G + P G + + +NP + Sbjct: 93 VTVYRDRLA-----IASYPV--GIGKPG-------WETPRGTFRVMSKIVNPTWQHPWNG 138 Query: 121 SINIGFPN-----EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 S+ PN + + HG S GC M N+ ++ ++ +V Sbjct: 139 SLVPPGPNNPLGDRWIGFWTDGKNSIGFHGTTAESLIGQAVSHGCVRMKNRDIRALFELV 198 Query: 168 RDSLRGNMQS 177 + ++Q Sbjct: 199 EEGAIVSVQP 208 >gi|116048645|ref|YP_792555.1| hypothetical protein PA14_54810 [Pseudomonas aeruginosa UCBPP-PA14] gi|115583866|gb|ABJ09881.1| hypothetical protein PA14_54810 [Pseudomonas aeruginosa UCBPP-PA14] Length = 347 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 31/177 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQK------KRTSPFHPTVI 54 M +LL A + + + + SM+ SP P I Sbjct: 1 MKRSLAVLLLAFAVGSLHAAPASPANAPLPPADIKARLKSMKPGEYLWYPEVSPQGPVTI 60 Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 + E I++ + I + + G K P G + I +++ Sbjct: 61 VVSLTEQKAYIYRNGIA----------IGVSTLSSGKKGRE----TPTGVFSILQKSVDH 106 Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAI 166 S + S + + T + +H G AS GC + +++Y I Sbjct: 107 KSDLYNSAPMPY------MQRLTWDGIALHAGNLPGYPASHGCIRLPMAFAKKLYGI 157 >gi|81299458|ref|YP_399666.1| hypothetical protein Synpcc7942_0647 [Synechococcus elongatus PCC 7942] gi|81168339|gb|ABB56679.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 180 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 60/190 (31%), Gaps = 34/190 (17%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEH-----PLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 LL+ + + C + + + + + +P T + + + Sbjct: 5 LLWNSSLLVACCAIASPVAAIPIPPPATMAVPAIPVEATIAPPPAPAPTTKLVLSLRQRR 64 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKYFL 120 + +++ + + Y + G G + P G + + +NP + Sbjct: 65 VTVYRDRLA-----IASYPV--GIGKPG-------WETPRGTFRVMSKIVNPTWQHPWNG 110 Query: 121 SINIGFPN-----EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 S+ PN + + HG S GC M N+ ++ ++ +V Sbjct: 111 SLVPPGPNNPLGDRWIGFWTDGKNSIGFHGTTAESLIGQAVSHGCVRMKNRDIRALFELV 170 Query: 168 RDSLRGNMQS 177 + ++Q Sbjct: 171 EEGAIVSVQP 180 >gi|255527321|ref|ZP_05394199.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7] gi|296184916|ref|ZP_06853327.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7] gi|255508968|gb|EET85330.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7] gi|296050698|gb|EFG90121.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7] Length = 233 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 24/127 (18%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P +I + + N L ++K + K Y++ + D +P G + I Sbjct: 40 PKSNYIIVVDVSSNNLIVFKDGIQ-----FKSYQVASGKY---------DTPSPLGTWKI 85 Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTG-ADLMIHGE---CASAGCYAMNNKQMQEI 163 + + P + G + G +S GC M N ++ E+ Sbjct: 86 VSKDNWGEGFGGYWMGFNVP------WGKYGIHGTLFPGSIGWNSSHGCIRMKNSEVAEL 139 Query: 164 YAIVRDS 170 Y I+ Sbjct: 140 YKIIPYG 146 >gi|296390924|ref|ZP_06880399.1| hypothetical protein PaerPAb_22335 [Pseudomonas aeruginosa PAb1] Length = 347 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 31/177 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQK------KRTSPFHPTVI 54 M +LL A + + + + SM+ SP P I Sbjct: 1 MKRSLAVLLLAFAVGSLHAAPASPANAPLPPADIKARLKSMKPGEYLWYPEVSPQGPVTI 60 Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 + E I++ + I + + G K P G + I +++ Sbjct: 61 VVSLTEQKAYIYRNGIA----------IGVSTLSSGKKGRE----TPTGVFSILQKSVDH 106 Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAI 166 S + S + + T + +H G AS GC + +++Y I Sbjct: 107 KSDLYNSAPMPY------MQRLTWDGIALHAGNLPGYPASHGCIRLPMAFAKKLYGI 157 >gi|34498927|ref|NP_903142.1| hypothetical protein CV_3472 [Chromobacterium violaceum ATCC 12472] gi|34104776|gb|AAQ61133.1| hypothetical protein CV_3472 [Chromobacterium violaceum ATCC 12472] Length = 208 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 57/213 (26%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M ++ +LL L +L+ +A+ + P V K++ Sbjct: 1 MRAKFAVLLACLVQPCLAAVDDAALVLQAQTDGPLQATHPNARH---YGAPWVWVGVKSQ 57 Query: 61 --NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG---------- 108 +L+ W + KE+ + G +G Q P G++ + Sbjct: 58 TLRLLDDWG-------RIQKEFTVSTAKNGVGE--TSGSYQTPRGWHAVCEKLGAGAEAN 108 Query: 109 ----WNNLNPNSKYFLSINIGFPNEFDKAHNR------------TGAD-------LMIHG 145 + P KY +++ +PN+ D R G + + IHG Sbjct: 109 TIIFRRQVTPW-KYTPELHVQYPNK-DWILTRILWLCGQEPGLNQGGNVDSYDRAIYIHG 166 Query: 146 E--------CASAGCYAMNNKQMQEIYAIVRDS 170 +S GC M N+ + E++ V + Sbjct: 167 AGDHVPWGRPSSLGCVRMKNRDVIELFDAVPNG 199 >gi|323701941|ref|ZP_08113610.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans DSM 574] gi|323533027|gb|EGB22897.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans DSM 574] Length = 314 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 39/156 (25%) Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKIC 83 + + E P++++ + P + I + L + K++ I Sbjct: 106 QMARQIELPVTKSETLP------PPTGQIALIIDTTKRKLTVMADG-----KPYKQFNIA 154 Query: 84 AWSGTFGPKIETGDEQAPEGFYYIGWNNLNP-NSKYFLSINIGFPNEFDKAHNRTGADLM 142 P +P G + + +N + + + P G Sbjct: 155 CG-APETP--------SPVGSWQVAHKAINWGDGFGTRWLGLNVP------WGIYG---- 195 Query: 143 IHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170 IHG S GC M+N ++E+Y V Sbjct: 196 IHGTNKPFSIGTYASHGCIRMHNSSVEELYPWVPKG 231 >gi|307293274|ref|ZP_07573120.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum L-1] gi|306881340|gb|EFN12556.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum L-1] Length = 362 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 57/186 (30%), Gaps = 35/186 (18%) Query: 18 GCHHSRSLIDKAEHPLSENLI------ISMQKKRTSPFHPTV--IRIFKNENILEIWKRN 69 G + + A P++ + + P I + K++ +L ++ Sbjct: 186 GAGATIRVPAIANQPVARIEGDERGWGAMLASLGVAKDQPQADHIVVDKSDGVLRVY--- 242 Query: 70 VDAEYVLLKEYKICAWSG----TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG 125 DA+ L+ ++ S G G + P+ Y +S + G Sbjct: 243 -DAQNRLIAQFPATMGSQHDPLPIGTWEIKGLSRNPDFHYNPDLFWDASSSDQKAVLKPG 301 Query: 126 FPNE------FDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSL 171 PN D + G IHG S GC + N + +V+ + Sbjct: 302 -PNGPVGVVWIDLSKPHYG----IHGTPEPQTIGRAESHGCIRLTNWDAARLAQMVQSGV 356 Query: 172 RGNMQS 177 + Q Sbjct: 357 KAVFQP 362 >gi|302872405|ref|YP_003841041.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor obsidiansis OB47] gi|302575264|gb|ADL43055.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor obsidiansis OB47] Length = 223 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 41/169 (24%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 +I + +++ L ++K + L K Y I P P G + I + Sbjct: 34 YLIYVSIDDSRLYVFKEGI-----LYKSYPISPGK-PSTP--------TPVGTFKIISKD 79 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEI 163 + + + + G IHG S GC M NK ++E+ Sbjct: 80 YWGEGFGGRWMGLN------VVYGKYG----IHGTIYENYIGAHVSKGCVRMLNKDVKEL 129 Query: 164 YAI--------VRDSLRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSF 204 ++ + + + G ++ + +P M + + F Sbjct: 130 FSYISVGTTVVISEGIYGEFRNGFRT-IYPGDTGEDVMAVQRRLKKLGF 177 >gi|78224173|ref|YP_385920.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] gi|78195428|gb|ABB33195.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 300 Score = 46.4 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 30/127 (23%) Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + L ++ ++ + + S G ++ P G Y + NP L Sbjct: 110 SELRLYFVPEGGTPRIV-SFPVGTGS--------EG-KETPLGVYRVTEKRANPAWHVPL 159 Query: 121 SI-------NIGFPNEFDKAHNR-----TGADLMIHGE--------CASAGCYAMNNKQM 160 SI P D T LMIHG S GC + + + Sbjct: 160 SIRQERPRLPAVVPPGPDNPLGSHALRLTDDGLMIHGTNRPWGVGRNVSHGCIRLYPEDI 219 Query: 161 QEIYAIV 167 ++ +V Sbjct: 220 PVLFRLV 226 >gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thiobacillus denitrificans ATCC 25259] gi|74056730|gb|AAZ97170.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 164 Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 44/156 (28%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 VI + L +W+R D + L++EY + + G ++G P G + + Sbjct: 5 VIDVDIARQRLYLWERFPDGDM-LIREYPVSTAANGAGE--QSGSYCTPRGRHRVAQKI- 60 Query: 113 NPNSKYFLSI------------NIGFPNE---FDKAH---------NRT-GA-------D 140 + + + + N + R G Sbjct: 61 GAGAPLYAAFKARQATGEIWTPGLDAQNPGRDWILTRILWLEGLEPGRNQGGTVDSHDRY 120 Query: 141 LMIHGE--------CASAGCYAMNNKQMQEIYAIVR 168 + IHG AS GC M N + E++ +V Sbjct: 121 IYIHGTNEEHRIGTPASHGCVRMKNADVAELFELVE 156 >gi|294497318|ref|YP_003561018.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551] gi|294347255|gb|ADE67584.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551] Length = 256 Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 33/154 (21%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 S +I I K+ N L + R L++ +K+ PEG + Sbjct: 25 SAASNQLIIINKSTNTLAFYDRG-----KLVRTFKVATGRQMS---------YTPEGTFS 70 Query: 107 IGWNNLNPNSKYFLSINIGFP-NEF-DK-----AHNRTGADLMIHGECA--------SAG 151 I N Y +I G P N D+ A G IHG S+G Sbjct: 71 IVNKIKN-RPYYKDNIRGGDPRNPLGDRWLGLNARGTYGTTYAIHGNNNPSSIGTYASSG 129 Query: 152 CYAMNNKQMQEIYAIVRDSLRGN-MQSHIQIQAF 184 C M +++++ ++ V+ + Q Q+F Sbjct: 130 CIRMYDEEVRWLFDRVQTGTKVVIGQ--FHSQSF 161 >gi|225848549|ref|YP_002728712.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense Az-Fu1] gi|225643366|gb|ACN98416.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense Az-Fu1] Length = 249 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 32/158 (20%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 + +N I + K+ P + ++ + ++ + + + Sbjct: 92 VPKNTYIKVPLKKQLPEDFKLNTVYISTQDHRLYYPIELEGKKYVITFPVGLGGE----- 146 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN---------EFD----KAHNRTGA 139 D P+G + I +NP+ S I PN + +A G+ Sbjct: 147 ----DFPTPKGEFKITERRVNPDWVVPPSAKINNPNLPPVVPYGSPENGLGTRALRLNGS 202 Query: 140 DLMIHGECA----------SAGCYAMNNKQMQEIYAIV 167 MIHG S GC + N ++ +Y V Sbjct: 203 SYMIHGTSKRSEKGVGMNISYGCIVLRNNDIERLYNFV 240 >gi|288554783|ref|YP_003426718.1| murein binding protein [Bacillus pseudofirmus OF4] gi|288545943|gb|ADC49826.1| murein binding protein [Bacillus pseudofirmus OF4] Length = 165 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + + L +++ L K Y I P G + I Sbjct: 56 PYFIDVSISNRTLSLYENE-----QLQKVYPIAVGRML---------YDTPVGEFIIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + ++ + HG S GC M N+ ++E Sbjct: 102 EPNPGGPF-GTLWLS--------LSKKSYGI--HGTNDPSSIGHAVSKGCIRMFNQDVEE 150 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 151 LGSIVPNGTR 160 >gi|299768887|ref|YP_003730913.1| hypothetical protein AOLE_03195 [Acinetobacter sp. DR1] gi|298698975|gb|ADI89540.1| hypothetical protein AOLE_03195 [Acinetobacter sp. DR1] Length = 167 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 44/142 (30%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK-------------YFLSINI 124 K Y I G + + P G++ + + + Y + Sbjct: 27 KFYVISTGKNGIGE--QENTGRTPRGWHRVAKKIGAESPQNAVFIARKPTGEVYSTELAT 84 Query: 125 GFPNEFDKAHNR--------------TGAD-----LMIHGECA--------SAGCYAMNN 157 +P E D +R G D + IHG S GC M N Sbjct: 85 QYP-ERDWILSRILWLDGLEEGFNKGEGHDTMQRYIYIHGTPDTQPMGVPMSHGCVRMRN 143 Query: 158 KQMQEIYAIV-RDSLRGNMQSH 178 +++ E++ +V D+L + Sbjct: 144 EEIIELFDLVAEDALVYLSEQS 165 >gi|138894958|ref|YP_001125411.1| hypothetical protein GTNG_1296 [Geobacillus thermodenitrificans NG80-2] gi|134266471|gb|ABO66666.1| hypothetical protein GTNG_1296 [Geobacillus thermodenitrificans NG80-2] Length = 191 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 40/154 (25%), Gaps = 56/154 (36%) Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY-------------- 105 L ++++ +L ++ G K + GD + P G Y Sbjct: 18 SGTLYLYEKQNGTWRKVLANIRVVVGKNGIG-KQKEGDGKTPAGVYPLGTAFGTAKKPAG 76 Query: 106 -YIGWNNLNPNSK----------------------------------YFLSINIGFPNEF 130 I + Y ++ + + N+ Sbjct: 77 LKIPYRQTTAYDYWVDDPTSKDYNRWIYYRGNPHRRWKSFERLTHPLYKYAVVVRY-NDS 135 Query: 131 DKAHNRTGADLMIHGECA----SAGCYAMNNKQM 160 + G+ + +H + GC AM K + Sbjct: 136 PIVKGK-GSAIFLHIWPRPSSYTLGCIAMAEKDL 168 >gi|148266086|ref|YP_001232792.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4] gi|146399586|gb|ABQ28219.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4] Length = 292 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 35/130 (26%) Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + ++ L+ + I G G + P G + + NP+ Sbjct: 101 SEMRLYYSFSFKGARLIASFPI-----GIGD---EG-KDTPVGTFRVIQKIENPSWYVPQ 151 Query: 121 SINIGFPNEFD---------------KAHNRTGADLMIHGECA--------SAGCYAMNN 157 S+ + P D + RT ++IHG S GC + Sbjct: 152 SVKMEKPELPDVVPPGPDNPLGTHAMRLSERT---ILIHGTNKPWGVGRRVSHGCIRLYP 208 Query: 158 KQMQEIYAIV 167 + + +Y +V Sbjct: 209 EDIPRLYRLV 218 >gi|226941454|ref|YP_002796528.1| hypothetical protein LHK_02537 [Laribacter hongkongensis HLHK9] gi|226716381|gb|ACO75519.1| ErfK/YbiS/YcfS/YnhG precursor [Laribacter hongkongensis HLHK9] Length = 340 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 56/174 (32%), Gaps = 27/174 (15%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKK--------RTSPFHPTVI 54 R +L+ + I S+ + +S + K SP P + Sbjct: 2 RRIAVLIAGMGIMSCVWAQPASVPAPSNPDVSLAENSELSLKPGEFRWKPDISPAGPITL 61 Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 I +E L +++ + + I + + P G + I + Sbjct: 62 VISLSEQRLYVYRNGIA-----IGVSTISSGRRGM---------ETPTGVFSILQKRVKH 107 Query: 115 NSKYFLSINIGFPNE--FDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAI 166 S + + + + +D G+ + G AS GC + + Q++Y + Sbjct: 108 FSNKYDNAPMPYMQRLTWDGIALHGGS---LPGYPASHGCIRLPHAFAQKLYTV 158 >gi|61680534|pdb|1Y7M|A Chain A, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A Resolution gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A Resolution Length = 164 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 43/130 (33%), Gaps = 33/130 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + L + N + K Y I KI T Q P G +YI Sbjct: 55 PYHIAVSIGAKTLTLSLNN-----RVXKTYPIAVG------KILT---QTPTGEFYIINR 100 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + + + + G IHG S GC +NK + E Sbjct: 101 QRNPGGPF-GAYWLS------LSAAHYG----IHGTNNPASIGKAVSKGCIRXHNKDVIE 149 Query: 163 IYAIVRDSLR 172 + +IV + R Sbjct: 150 LASIVPNGTR 159 >gi|315646088|ref|ZP_07899208.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453] gi|315278287|gb|EFU41603.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453] Length = 112 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 28/102 (27%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134 ++ Y I Q P G Y I NP + + +G Sbjct: 22 AVVHTYPIAVGKMAT---------QTPPGNYTIVTKEPNPGGPF-GAYWLG--------L 63 Query: 135 NRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168 ++ + HG S GC M N+ + ++ ++V Sbjct: 64 SKPHYGI--HGTNDPSSIGRSVSHGCIRMYNEDVVQLASLVP 103 >gi|209885450|ref|YP_002289307.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5] gi|209873646|gb|ACI93442.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5] Length = 426 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 41/150 (27%), Gaps = 34/150 (22%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSP---------FHPTVIRIFKNENILEIWKRNV 70 E P + + +K P P +I I E L+++ N Sbjct: 21 DGPDVERSYVEPPPAPRPQVKHTRKAQKPAVIKEAAKPQGPVLISISIEEQRLKVYDSNG 80 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEF 130 L E I G G P G + I S + + + Sbjct: 81 -----LYAETPIST--GMRGH-------STPMGVFSIIGKKKFHRSNIYSGAPMPY---- 122 Query: 131 DKAHNRTGADLMIH-----GECASAGCYAM 155 T + + +H G AS GC M Sbjct: 123 --MQRITWSGIALHAGVLPGYPASHGCIRM 150 >gi|258516740|ref|YP_003192962.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans DSM 771] gi|257780445|gb|ACV64339.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans DSM 771] Length = 309 Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 33/130 (25%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 P I + L ++ N ++Y + P P G + Sbjct: 118 PPQGKPSIVVDTVNRTLTVFIDN-----EPYRQYYVAVGK-PETP--------TPIGSWT 163 Query: 107 IGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNN 157 + +N + + I + P G IHG S GC M+N Sbjct: 164 VVRKAMNWGTGFGTRWIGLNVP------WGIFG----IHGTNKPYSIGGYESHGCIRMHN 213 Query: 158 KQMQEIYAIV 167 ++ IY ++ Sbjct: 214 SNVEAIYPLI 223 >gi|251794953|ref|YP_003009684.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2] gi|247542579|gb|ACS99597.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2] Length = 341 Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 42/136 (30%), Gaps = 34/136 (25%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I +N L + K + I + G K P G + I N Sbjct: 218 IDIDITKNKLYV---KSGGTVK--KTFDIAS-----GKKA----GLTPTGTFEILTKIEN 263 Query: 114 P-------------NSKYFLSINIGFPNEFDKAHNRTG----ADLMIHGECASAGCYAMN 156 P N + I PN + G + + G ASAGC M Sbjct: 264 PWYSAKGIPGGDPKNPLGSRWLGISVPNTQGTKYGIHGTNAPSSI---GTNASAGCIRML 320 Query: 157 NKQMQEIYAIVRDSLR 172 N+ ++ +Y V + Sbjct: 321 NEDVEWLYNAVPTGTK 336 >gi|205373921|ref|ZP_03226722.1| hypothetical protein Bcoam_12030 [Bacillus coahuilensis m4-4] Length = 168 Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 39/136 (28%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P P I I K N L +++N L Y++ D+ PEG + + Sbjct: 24 PGDP-FIIINKTTNELAFFQKN-----ELQHIYQVGTGRT---------DDLTPEGLFTV 68 Query: 108 GWNNLNPNSKYFLSINIGFP-----NEFDKAH-----NRTGADLM-IHGEC--------A 148 NP Y+ ++I P N T + IHG Sbjct: 69 TVKAKNP---YYRKLDI--PGGDSNNPLGTRWIGFDAEETDGRIYGIHGTNRAESIGYYV 123 Query: 149 SAGCYAMNNKQMQEIY 164 S GC M N ++E++ Sbjct: 124 SNGCVRMTNPSVEELF 139 >gi|291459130|ref|ZP_06598520.1| putative secreted protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418384|gb|EFE92103.1| putative secreted protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 266 Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 44/151 (29%), Gaps = 59/151 (39%) Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK----IETGDEQAPEGFYYI---- 107 I K + L +W + D + + EY + G G K GD P G + I Sbjct: 90 ILKLGHRLSLWNKEEDGRWKKVAEYY--SGHGRNGFKKAEERREGDGTTPIGSFPILFSF 147 Query: 108 ----------GWNNLNPNSKY--------------------FLSINIGFP---------- 127 + ++ NS + L I +P Sbjct: 148 GQGDKPETEMSYRRISRNSYWSSGRKDYNSWVESGKKIEGEHL---IEYPICYQYAMAVG 204 Query: 128 -NEFDKAHNRTGADLMIH----GECASAGCY 153 N+ R G+ + +H S+GC Sbjct: 205 FNQNPAVFGR-GSAIFLHIKAPDTWESSGCI 234 >gi|224826667|ref|ZP_03699768.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002] gi|224601268|gb|EEG07450.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002] Length = 305 Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 39/145 (26%), Gaps = 40/145 (27%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 + I + L +++ LLK Y + Q P G Y + Sbjct: 39 GSGLHVVINLPQTRLFVYRDGT-----LLKSYPVAVGKMLT---------QTPTGTYAVT 84 Query: 109 WNNLNPNSKYFLSIN-----------IGFPNEFDKAHN----RTGA---DLMIHGECA-- 148 P SI P D R G L +HG Sbjct: 85 GIYPKPIWYVPKSIQEEMKQQGKPVLTSVPPGPDNPLGNAFVRFGDPRLGLGMHGTNVPT 144 Query: 149 ------SAGCYAMNNKQMQEIYAIV 167 S GC + N+ + E+ + V Sbjct: 145 SVPGFRSHGCVRLKNEDIDELASTV 169 >gi|308049519|ref|YP_003913085.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799] gi|307631709|gb|ADN76011.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799] Length = 308 Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%) Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVR 168 N ++ + + N H T + I G SAGC M ++E++ +VR Sbjct: 178 PDNPMGHRALRLSYGNGEYLIHG-TNHEFGI-GMRVSAGCIRMRPNDIEELFELVR 231 >gi|295703434|ref|YP_003596509.1| hypothetical protein BMD_1298 [Bacillus megaterium DSM 319] gi|294801093|gb|ADF38159.1| conserved hypothetical protein [Bacillus megaterium DSM 319] Length = 170 Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I +F E LE+ + N+ + K Y I A P G + I Sbjct: 55 PYTIHVFIAEKQLELRRNNI-----IQKVYPIAAGKMLSA---------TPTGDFVIVNR 100 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + ++ + HG S GC M N Q+ E Sbjct: 101 EPNPGGPF-GTMWLS--------LSKKSYGI--HGTNDPSSIGKAVSKGCIRMYNAQVNE 149 Query: 163 IYAIVRDS 170 + IV + Sbjct: 150 LAQIVPNG 157 >gi|170756349|ref|YP_001780527.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str. Okra] gi|169121561|gb|ACA45397.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str. Okra] Length = 125 Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 33/141 (23%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 ++ + S I I + L ++K N + K YK+ P Sbjct: 1 MLYYLYPYNQSYRSIYHIIINTQTHTLTLFKDNN-----VYKTYKVAVGK-PSTP----- 49 Query: 97 DEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 P+G + I +NP + + + P + G IHG Sbjct: 50 ---TPKGTFKIINRAINPGGPFGARWLGLNIP------YGDYG----IHGTNNPSSIGKS 96 Query: 149 -SAGCYAMNNKQMQEIYAIVR 168 S GC M N Q+ E+ +V Sbjct: 97 VSNGCIRMFNNQVIELSNLVP 117 >gi|262379111|ref|ZP_06072267.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|262298568|gb|EEY86481.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 169 Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 43/135 (31%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN--LNPNSKYFLS----------- 121 L K Y I + G + Q P G++ I +P + F++ Sbjct: 24 KLKKCYAISSGKNGVGE--QENTGQTPRGWHRIEKKIGAEHPKNSVFIARQFTDEIYSPE 81 Query: 122 INIGFPNEFDKAHNR--------TGAD-----------LMIHGECA--------SAGCYA 154 + FP D R G + + IHG S GC Sbjct: 82 LAAQFPQR-DWILTRILWLHGLEPGFNQGEGRDTFQRYIYIHGTPDTEPMGIPMSHGCIR 140 Query: 155 MNNKQMQEIYAIVRD 169 M N+++ E++ +V + Sbjct: 141 MRNEEIIELFDLVPE 155 >gi|168178292|ref|ZP_02612956.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC 2916] gi|168184118|ref|ZP_02618782.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf] gi|226948166|ref|YP_002803257.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str. Kyoto] gi|237794190|ref|YP_002861742.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str. 657] gi|182670899|gb|EDT82873.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC 2916] gi|182672811|gb|EDT84772.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf] gi|226841594|gb|ACO84260.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str. Kyoto] gi|229261214|gb|ACQ52247.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str. 657] Length = 125 Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 33/141 (23%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 ++ + S I I + L +++ N + K YK+ P Sbjct: 1 MLYYLYPYNQSYRAIYRIVINTKAHTLTLFRNNN-----VYKTYKVAVGK-PSTP----- 49 Query: 97 DEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 P+G + I +NP + + + P + G IHG Sbjct: 50 ---TPKGTFKIINRAINPGGPFGARWLGLNIP------YGDYG----IHGTNNPSSIGKS 96 Query: 149 -SAGCYAMNNKQMQEIYAIVR 168 S GC M N Q+ E+ +V Sbjct: 97 VSNGCIRMFNNQVIELSNLVP 117 >gi|326201826|ref|ZP_08191697.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM 2782] gi|325988426|gb|EGD49251.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM 2782] Length = 123 Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 20/125 (16%) Query: 46 TSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 P I I ++ + L +++ ++ + K Y + P P G Sbjct: 7 FYFSRPVYSITINRSLHKLTLYRDSI-----VFKNYPVAVGK-PSTP--------TPVGT 52 Query: 105 YYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTG-ADLMIHGECASAGCYAMNNKQMQE 162 + I +NP + + + PN H + + G+ S GC M N+Q+ E Sbjct: 53 FRIVNRAINPGGPFGARWLGLNAPNCDYGIHGTNNPSSI---GKDVSNGCIRMFNEQVIE 109 Query: 163 IYAIV 167 + +V Sbjct: 110 LSNLV 114 >gi|259507992|ref|ZP_05750892.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium efficiens YS-314] gi|259164487|gb|EEW49041.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium efficiens YS-314] Length = 391 Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 39/129 (30%), Gaps = 28/129 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE-QAPEG 103 + + N +E++ LL+ + DE P G Sbjct: 224 NFTIGDRVEAVVDDNTKTMEVYHNGT-----LLRTIPVSLG--------RDTDEWATPNG 270 Query: 104 FYYI---GWNNLNPNSKYFLSINIG-FPNEFDKAHNRTGADLMIHGECASA--------- 150 Y I + + ++ + L + G + D A + + + +H SA Sbjct: 271 IYIIGDRNPSMIMDSTTFGLGYDQGGYRTPVDFATQMSYSGIYVHAAPWSAAEQGYSNVS 330 Query: 151 -GCYAMNNK 158 GC + + Sbjct: 331 HGCINVTTE 339 >gi|25028928|ref|NP_738982.1| putative lipoprotein [Corynebacterium efficiens YS-314] gi|23494215|dbj|BAC19182.1| putative lipoprotein [Corynebacterium efficiens YS-314] Length = 403 Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 39/129 (30%), Gaps = 28/129 (21%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDE-QAPEG 103 + + N +E++ LL+ + DE P G Sbjct: 236 NFTIGDRVEAVVDDNTKTMEVYHNGT-----LLRTIPVSLG--------RDTDEWATPNG 282 Query: 104 FYYI---GWNNLNPNSKYFLSINIG-FPNEFDKAHNRTGADLMIHGECASA--------- 150 Y I + + ++ + L + G + D A + + + +H SA Sbjct: 283 IYIIGDRNPSMIMDSTTFGLGYDQGGYRTPVDFATQMSYSGIYVHAAPWSAAEQGYSNVS 342 Query: 151 -GCYAMNNK 158 GC + + Sbjct: 343 HGCINVTTE 351 >gi|332712211|ref|ZP_08432139.1| hypothetical protein LYNGBM3L_72340 [Lyngbya majuscula 3L] gi|332349017|gb|EGJ28629.1| hypothetical protein LYNGBM3L_72340 [Lyngbya majuscula 3L] Length = 205 Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 30/151 (19%) Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 PL E Q++ P ++ I +E L +++ + L Y + Sbjct: 60 PLEEVNHYLRQEEDFFNNTPRLV-IKLSERRLYVYRGD-----KLEASYPVAIGQPG--- 110 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-------NEFDKAHNRTGADLMIH 144 + P G + + NP K+ L+ + P + + + H Sbjct: 111 ------WETPTGNFQVTQMVQNPVWKHPLTGEVVAPGPENPLGPRWMAFWSDGTNYIGFH 164 Query: 145 GEC--------ASAGCYAMNNKQMQEIYAIV 167 G S GC M N ++ +Y V Sbjct: 165 GTNDEELVGQAVSHGCIRMRNDDVKALYNRV 195 >gi|294498085|ref|YP_003561785.1| hypothetical protein BMQ_1318 [Bacillus megaterium QM B1551] gi|294348022|gb|ADE68351.1| conserved hypothetical protein [Bacillus megaterium QM B1551] Length = 170 Score = 45.3 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I +F E LE+ + N+ + K Y I A P G + I Sbjct: 55 PYTIHVFIAEKQLELRRNNI-----IQKVYPIAAGKMLSA---------TPTGDFIIVNR 100 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + ++ + HG S GC M N Q+ E Sbjct: 101 EPNPGGPF-GTMWLS--------LSKKSYGI--HGTNDPSSIGKAVSKGCIRMYNAQVNE 149 Query: 163 IYAIVRDS 170 + IV + Sbjct: 150 LAKIVPNG 157 >gi|262281175|ref|ZP_06058957.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257406|gb|EEY76142.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 167 Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 44/135 (32%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK-------------YFLSINI 124 K Y I G + + P G++ + + + Y + Sbjct: 27 KFYVISTGKNGIGE--QENTGRTPRGWHRVAKKIGAESPQNAVFIARKPTGEVYSTELAA 84 Query: 125 GFPNEFDKAHNR--------TGAD-----------LMIHGECA--------SAGCYAMNN 157 +P E D +R TG + + IHG S GC M N Sbjct: 85 QYP-ERDWILSRILWLDGLETGFNKGEGHDTMQRYIYIHGTPDTQPMGVPMSHGCVRMRN 143 Query: 158 KQMQEIYAIV-RDSL 171 +++ E++ +V D+L Sbjct: 144 EEIIELFDLVAEDAL 158 >gi|119717403|ref|YP_924368.1| hypothetical protein Noca_3179 [Nocardioides sp. JS614] gi|119538064|gb|ABL82681.1| conserved hypothetical protein [Nocardioides sp. JS614] Length = 220 Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 W+R+ D + +E++ +G K GD ++P G Y I Sbjct: 56 WERDGDGHWSKAREFRSTIGLRGWG-KQREGDNRSPVGVYRI 96 >gi|94496487|ref|ZP_01303064.1| ErfK/YbiS/YcfS/YnhG [Sphingomonas sp. SKA58] gi|94424233|gb|EAT09257.1| ErfK/YbiS/YcfS/YnhG [Sphingomonas sp. SKA58] Length = 347 Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 61/188 (32%), Gaps = 41/188 (21%) Query: 18 GCHHSRSLIDKAEHPLSE---------NLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 G + + P+++ + S+ + P I + K+E +L+ + Sbjct: 171 GAGATIRVPAIDNQPVAQIEGDERGWGETLASLGVAKEQPQAD-HIVVDKSEGLLKAYDA 229 Query: 69 NVDAEYVLLKEYKICAWSG----TFGPKIETGDEQAPEGFYYIG--WNNLNPNSKYFLSI 122 + ++ ++ + S G G + PE Y W+ + + K L Sbjct: 230 DN----RMIAQFPVTTGSQHDPLPIGEWTIKGVSRNPEFHYNPDLFWDASSKDEKAVLKP 285 Query: 123 NIGFPNE------FDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 PN D + + G IHG S GC + N + +V+ Sbjct: 286 G---PNGPVGVVWIDLSKDHYG----IHGTPEPQTIGRTESHGCIRLTNWDAARLAQMVK 338 Query: 169 DSLRGNMQ 176 ++ Q Sbjct: 339 TGVKAKFQ 346 >gi|167465388|ref|ZP_02330477.1| YkuD [Paenibacillus larvae subsp. larvae BRL-230010] Length = 112 Score = 44.9 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 33/118 (27%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + + L ++ +++ Y + K T Q+P+G Y I N Sbjct: 6 IDVDTSSKTLTLYDNG-----RVVRTYPVAVG------KQVT---QSPKGTYSIINKQPN 51 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEI 163 P + + +G ++ + HG S GC M N+ + ++ Sbjct: 52 PGGPF-GAFWMG--------LSKLHYGI--HGTNDPSSIGKAVSHGCIRMYNQDVLDL 98 >gi|294669067|ref|ZP_06734153.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309059|gb|EFE50302.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 46 Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 15/22 (68%) Query: 147 CASAGCYAMNNKQMQEIYAIVR 168 + GC A+ + ++ E+YA+V+ Sbjct: 16 DWTHGCIAVTDGEIDELYALVK 37 >gi|322382702|ref|ZP_08056554.1| murein transglycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153311|gb|EFX45747.1| murein transglycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 114 Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 33/118 (27%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + + L ++ +++ Y + K T Q+P+G Y I N Sbjct: 8 IDVDTSSKTLTLYDNG-----RVVRTYPVAVG------KQVT---QSPKGTYSIINKQPN 53 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEI 163 P + + +G ++ + HG S GC M N+ + ++ Sbjct: 54 PGGPF-GAFWMG--------LSKLHYGI--HGTNDPSSIGKAVSHGCIRMYNQDVLDL 100 >gi|302879426|ref|YP_003847990.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans ES-2] gi|302582215|gb|ADL56226.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans ES-2] Length = 159 Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 44/156 (28%), Gaps = 45/156 (28%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN-- 111 I I+ LE+ +L+ Y + G +G P G + I Sbjct: 3 ISIYIKTQQLEL----RGDAEQVLRRYPVSTALKGAGE--LSGSYCTPRGRHIIRAKIGT 56 Query: 112 -----------LNPNSKYFLSINIGFP-NEFDKAH-----------NRTGAD------LM 142 Y ++ +P ++ NR G + + Sbjct: 57 DCPENAVFVRRRPTGEIYSEALGAQYPLRDWILTRILWLSGCEAGFNRLGKNDTMRRYIY 116 Query: 143 IHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170 IHG S GC M N + E+Y +V Sbjct: 117 IHGTPDTEPMGEARSHGCIRMRNADLVELYDLVPAG 152 >gi|118595120|ref|ZP_01552467.1| ErfK/YbiS/YcfS/YnhG [Methylophilales bacterium HTCC2181] gi|118440898|gb|EAV47525.1| ErfK/YbiS/YcfS/YnhG [Methylophilales bacterium HTCC2181] Length = 160 Score = 44.9 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 46/153 (30%), Gaps = 46/153 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I + L +++ L+ YK+ G E + P G + I Sbjct: 5 INISVSSQKLSLFQEG-----ELVSSYKVSTALKGVG--QEKNTNKTPLGNHIIRAMIGR 57 Query: 114 PNSKYFLSINIGFPNE-------------------------FDKAHNRTGA------DLM 142 Y + + NE D NR G + Sbjct: 58 NLPIYAVIKARRYTNEIWTKELDDPSITVDWILSRVIWLSGKDLGRNRLGNVDTMQRYIY 117 Query: 143 IHGE--------CASAGCYAMNNKQMQEIYAIV 167 IHG +S GC M+N+ + E++ +V Sbjct: 118 IHGTNEEHLLGTPSSHGCIRMSNEDVIELFDLV 150 >gi|313903373|ref|ZP_07836765.1| ErfK/YbiS/YcfS/YnhG family protein [Thermaerobacter subterraneus DSM 13965] gi|313466461|gb|EFR61983.1| ErfK/YbiS/YcfS/YnhG family protein [Thermaerobacter subterraneus DSM 13965] Length = 248 Score = 44.9 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 33/140 (23%) Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 + + + +I I + L +++ V +K + + A Sbjct: 48 LALQGGQAVAASGDVLIVIDIDRRQLTVYRDG-----VPVKTFPVAAGRPG--------- 93 Query: 98 EQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA-------- 148 E +P G + + P + + P G IHG Sbjct: 94 EPSPVGEWRVTDIAHWPGGPFGARWFGLSAP------WGSYG----IHGTNNPGSIGTYA 143 Query: 149 SAGCYAMNNKQMQEIYAIVR 168 S GC M N+ + + +V+ Sbjct: 144 SLGCIRMFNEDVMTLDHLVQ 163 >gi|303239713|ref|ZP_07326237.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2] gi|302592650|gb|EFL62374.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2] Length = 110 Score = 44.5 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 38/141 (26%), Gaps = 40/141 (28%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I I + +L ++ N L+K Y + P P G + I Sbjct: 2 YRIEIDTQKRVLTLFNDNN-----LVKRYPVAVGK-PSTP--------TPPGNWTIIKKG 47 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEI 163 L + + P G IHG S GC M + E+ Sbjct: 48 LWGAQFGGHFMQLSVP------WGIYG----IHGTDKPWSISQAVSHGCVRMYSPDAGEL 97 Query: 164 YAIVRDSLRGNMQSHIQIQAF 184 Y +V + + Sbjct: 98 YNMVPIGT--------PVHIY 110 >gi|318075894|ref|ZP_07983226.1| lipoprotein [Streptomyces sp. SA3_actF] Length = 237 Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 63/216 (29%), Gaps = 56/216 (25%) Query: 3 NRYNILLFALFIFLNGCHHSR-----SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 + I A+ L C A P + + + +I Sbjct: 1 MKVLIGTAAVLALLTSCSGQDGGDGVKKDAAASSPAAHRAPEADPTRVPGVGDRLQGQIP 60 Query: 58 KNENIL-EIWKRNVDAEYVLL-------KEYKICA-WSGTFGPK-----IETGDEQAPEG 103 + ++ + +D+ + K +K A W G G K D+++P G Sbjct: 61 AASRQVVAVYGKGIDSADSTVVLYTKTGKTWKASASWQGHNGKKGWTTAHHENDKRSPVG 120 Query: 104 FYY----------------------IGWNNLNPNSKYFLS---INIGF-------PNEFD 131 Y I + S + I I + PN+ Sbjct: 121 VYTLSDAGGVLADPGARLPYTQTASIQAPHYWSKSHWHDFDYVIAIDYNRVKGTAPNDPT 180 Query: 132 KAHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163 + +T G + + HG SA C +++ M+ + Sbjct: 181 RPEGQTKGGSIWLHMDHGSGTSA-CVSISKAGMKSL 215 >gi|138896847|ref|YP_001127300.1| hypothetical protein GTNG_3210 [Geobacillus thermodenitrificans NG80-2] gi|196250423|ref|ZP_03149115.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16] gi|134268360|gb|ABO68555.1| Conserved hypothetical protein [Geobacillus thermodenitrificans NG80-2] gi|196210082|gb|EDY04849.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16] Length = 165 Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I + L + R ++ Y + P G + I Sbjct: 56 PYTIHISISRRQLILKDRGRT-----IRTYPVGVGKMVTA---------TPVGDFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + ++ + + G IHG S GC M+NK + E Sbjct: 102 QPNPGGPF-GAMWLS------LSKIHYG----IHGTNDPSSIGKYVSRGCIRMHNKDVLE 150 Query: 163 IYAIVRDS 170 + +IV + Sbjct: 151 LASIVPNG 158 >gi|260906579|ref|ZP_05914901.1| lipoprotein [Brevibacterium linens BL2] Length = 271 Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 38/131 (29%), Gaps = 37/131 (28%) Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI--------GWNNLNPNSK---- 117 D ++ K + I + GD+ +P G + + P S+ Sbjct: 119 DDGDWKKRKTFDIHNGKKGWLADRREGDKTSPIGVFTLSDAGGYKKDPGTQLPYSQDDRL 178 Query: 118 ------YFLS---------INIGF-------PNEFDKAHN-RTGADLMIHGECAS--AGC 152 + S I I + P + + G + +H + S GC Sbjct: 179 PSSATVAYGSEYERVFDYIIAIDYNRVPGTPPTDRTRPLGWDKGGGIWLHLDHDSGTNGC 238 Query: 153 YAMNNKQMQEI 163 + K + I Sbjct: 239 VTLKEKDLTWI 249 >gi|312195803|ref|YP_004015864.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EuI1c] gi|311227139|gb|ADP79994.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EuI1c] Length = 313 Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 39/129 (30%), Gaps = 29/129 (22%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P + + K + L ++K Y + +GT P G +Y+ Sbjct: 191 PFALTVDKTRHELTVFKDG-----KPSGVYPVGIGTGTT---------PTPLGHFYLAEL 236 Query: 111 NLNPNSKYF---LSINIGFPNEFDKAHNRTGAD--LMIHGEC--------ASAGCYAMNN 157 N + + D N G + + +HG S GC + N Sbjct: 237 LKPANPAGPWGPYAFGLS--GFSDVITNFDGGNGIIGLHGTNQPDRVGTDVSMGCIRLRN 294 Query: 158 KQMQEIYAI 166 + + A+ Sbjct: 295 SDITALAAL 303 >gi|297563587|ref|YP_003682561.1| ErfK/YbiS/YcfS/YnhG family protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848035|gb|ADH70055.1| ErfK/YbiS/YcfS/YnhG family protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 249 Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 13/78 (16%) Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYF---LSINIG-FPNEFDKAHNRTGADLMIHGECA-- 148 G+ PEG YY P+ + + + F + G L +HG Sbjct: 156 EGETPTPEGRYYFTELLQPPDPEGPYGVYAFGLSGFSETLETFAGGPG-QLAVHGTNDED 214 Query: 149 ------SAGCYAMNNKQM 160 S GC ++N+ + Sbjct: 215 ALGREISHGCVRVSNEDI 232 >gi|90423846|ref|YP_532216.1| hypothetical protein RPC_2344 [Rhodopseudomonas palustris BisB18] gi|90105860|gb|ABD87897.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18] Length = 520 Score = 44.5 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 33/160 (20%) Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99 ++ + P P +I I + L+++ N L E + G G Sbjct: 89 KLETETRKPQGPLMIAISIEKQQLKLYDANG-----LFAESPVST--GMRGH-------A 134 Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYA 154 P G + + N S + + + T + + +H G AS GC Sbjct: 135 TPMGVFSVIQKNKWHRSNIYSGAPMPY------MQRITWSGIAMHAGALPGYPASHGCIR 188 Query: 155 MNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ 194 M +I+ R R + P + ++ Sbjct: 189 MPANFATKIWGWTRMGAR--------VVIAPGELAPEHFA 220 >gi|83588974|ref|YP_428983.1| ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073] gi|83571888|gb|ABC18440.1| ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073] Length = 294 Score = 44.5 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 41/140 (29%), Gaps = 33/140 (23%) Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 + P I I +L I + ++Y + K + Sbjct: 90 VAHQAPAGPPPGKNLKIVIDTERLVLTILVDG-----RVFQKYPVAIG------KYTS-- 136 Query: 98 EQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC--------A 148 +P G + I + + + P G IHG A Sbjct: 137 -PSPVGEWKIVDKAYESGGAFGTRWMGLNVP------WGNYG----IHGTNRPWSIGWAA 185 Query: 149 SAGCYAMNNKQMQEIYAIVR 168 SAGC+ M N+ ++ IY + Sbjct: 186 SAGCFRMFNEDIETIYPWIP 205 >gi|170759637|ref|YP_001786273.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str. Loch Maree] gi|169406626|gb|ACA55037.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str. Loch Maree] Length = 125 Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 33/141 (23%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 ++ + S I I + L ++K N + K YK+ P Sbjct: 1 MLYYLYPYNQSYRSIYHIIINTQTHTLTLFKDNN-----VYKTYKVAVGK-PSTP----- 49 Query: 97 DEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 P+G + I +NP + + + P + G IHG Sbjct: 50 ---TPKGNFKIINRAINPGGPFGARWLGLNIP------YGDYG----IHGTNNPSSIGKS 96 Query: 149 -SAGCYAMNNKQMQEIYAIVR 168 S GC M N Q+ E+ +V Sbjct: 97 VSNGCIRMFNNQVIELSNLVP 117 >gi|294497796|ref|YP_003561496.1| putative peptidoglycan binding domain-containing protein [Bacillus megaterium QM B1551] gi|294347733|gb|ADE68062.1| Putative peptidoglycan binding domain protein [Bacillus megaterium QM B1551] Length = 354 Score = 44.1 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 48/179 (26%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 R I+L A + L + A P +I I K N L Sbjct: 7 RTAIVLIAAILALACLFVGVPKTEAASTP------------------SHLIIINKATNKL 48 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSIN 123 ++ L++ + + PEG + + +N Y +I Sbjct: 49 AYYQNGS-----LVRTFSVGTGRTQS---------LTPEGHFKVVNKIVN-RPYYKGNIP 93 Query: 124 IGFP-----NEFDKAHNR--TGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 G P N + + R G IHG S+GC M +++++ +++ V Sbjct: 94 GGDPRNPLGNRWLGLNARGTYGTTYAIHGNNNPASIGKYVSSGCVRMYDEEVEWLFSKV 152 >gi|332974779|gb|EGK11695.1| ErfK/YbiS/YcfS/YnhG family protein [Desmospora sp. 8437] Length = 317 Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 32/132 (24%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + K N L + + +K Y + PEG + + + Sbjct: 55 IEVNKATNRLTLHQAGRA-----IKSYSVATGRSQS---------LTPEGTFKVVVKFIK 100 Query: 114 PNSKYFLSINIGFP-NEF------DKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158 P + I G P N + + G IHG AS+GC M N+ Sbjct: 101 P---GWKGIAGGLPENPLGERWIGIQVNGDRGRTYGIHGTNQPDSIGTHASSGCVRMRNR 157 Query: 159 QMQEIYAIVRDS 170 + ++Y V + Sbjct: 158 DVIDLYNRVPEG 169 >gi|157364476|ref|YP_001471243.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga lettingae TMO] gi|157315080|gb|ABV34179.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga lettingae TMO] Length = 399 Score = 44.1 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 43/153 (28%), Gaps = 48/153 (31%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + L ++ L+K + + P G Y+I ++ Sbjct: 267 IVVNTTVARLALYYNGT-----LVKSFPVAIGKSDT----------TPPGVYWIVKKEID 311 Query: 114 PNSKYFLSI-----NIG-----FPNEFDKAHNRTGADLMIHGE--CA------SAGCYAM 155 P ++ I + + + HG S GC M Sbjct: 312 PALYWYGEYIPPRSPINGLGTRY-----LQLSNPTYGI--HGTTKPWEIGKRISHGCIRM 364 Query: 156 NNKQMQEIYAIVRDSLRGNMQSHI---QIQAFP 185 N+ ++ + D+ I ++AFP Sbjct: 365 LNQDIETL-----DAFIDLGTKVIVIKSMEAFP 392 >gi|113475770|ref|YP_721831.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] gi|110166818|gb|ABG51358.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101] Length = 219 Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 29/152 (19%) Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90 P S + ++ K P + I ++ + ++K + L Y I Sbjct: 72 KPKSITIKKALNKLYIKPNETISLVIKLSDRRVYVYKND-----QLKTSYPIAIG----- 121 Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP---NE----FDKAHNRTGADLMI 143 + G + P G + + NP+ + + I P N + + Sbjct: 122 ---KEG-WETPTGTHKVIQKIPNPSWTHPFTGEIIPPGPENPLGERWIGFWTDGTNYIGF 177 Query: 144 HGECA--------SAGCYAMNNKQMQEIYAIV 167 HG S GC M N+ + +++ V Sbjct: 178 HGTPNEETVGQAASHGCVRMFNQDVLDLFEKV 209 >gi|261405715|ref|YP_003241956.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10] gi|261282178|gb|ACX64149.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10] Length = 112 Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 33/127 (25%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 I + ++ L + N+ +++ + + Q+P G Y I Sbjct: 2 PQYRIIVDLSDFQLHLLDGNI-----VVRTFPVAIGKMAT---------QSPPGNYTIVN 47 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQ 161 NP + + +G ++ + HG S GC M N+ + Sbjct: 48 KQPNPGGPF-GAYWLG--------LSKPHYGI--HGTNDPSSIGRSVSHGCIRMYNEDVV 96 Query: 162 EIYAIVR 168 E+ ++V Sbjct: 97 ELASLVP 103 >gi|119488958|ref|ZP_01621893.1| ErfK/YbiS/YcfS/YnhG-like protein [Lyngbya sp. PCC 8106] gi|119454914|gb|EAW36057.1| ErfK/YbiS/YcfS/YnhG-like protein [Lyngbya sp. PCC 8106] Length = 193 Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 35/166 (21%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 G ++ + K P ++ ++ K + P +IR+ ++ + +++++ LL Sbjct: 37 GVVAAKLSVTKFSTP--KSSLLHQISKPSDPKLQLIIRL--SDRRVYVYRQD-----QLL 87 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT 137 Y I + P G Y + P ++ + I P D Sbjct: 88 TSYPIAVGRDG---------WETPTGQYQVIQKIQEPAWEHPFTGEI-IPPGPDNPLGMR 137 Query: 138 -------G-ADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 G + HG S GC M N+ +Q ++ V Sbjct: 138 WIGFWTDGTNYIGFHGTPNEDTVGQAASHGCIRMLNQDVQLLFEKV 183 >gi|153941218|ref|YP_001390250.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str. Langeland] gi|152937114|gb|ABS42612.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str. Langeland] gi|295318345|gb|ADF98722.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str. 230613] Length = 125 Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 33/141 (23%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 ++ + S I I + L ++K N + K YK+ P Sbjct: 1 MLYYLYPYNQSYRSIYHIIINTQAHTLTLFKDNN-----VYKTYKVAVGK-PSTP----- 49 Query: 97 DEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 P+G + I +NP + + + P + G IHG Sbjct: 50 ---TPKGTFKIINRAINPGGPFGARWLGLNIP------YGDYG----IHGTNNPSSIGKS 96 Query: 149 -SAGCYAMNNKQMQEIYAIVR 168 S GC M N Q+ E+ IV Sbjct: 97 VSNGCIRMFNNQVIELSNIVP 117 >gi|52841812|ref|YP_095611.1| hypothetical protein lpg1582 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628923|gb|AAU27664.1| hypothetical protein lpg1582 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 146 Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 43/136 (31%), Gaps = 43/136 (31%) Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEG---FYYIGWNNLNPNSK----------Y 118 + L+ Y I + G KI +G P G Y I +L NS Y Sbjct: 5 EKDHLIANYAISSGKNGVGEKINSG--CTPRGWHKIYSILGIDLPINSVMVAREWTGEIY 62 Query: 119 FLSINIGFPNEFDKAHNR------------TGAD-------LMIHGECA--------SAG 151 S+ FP E D R G D + IHG S G Sbjct: 63 SESLATQFP-ERDWILTRVLQLDGLEPGRNKGGDVDTLHRYIYIHGTPDTTQLGIPGSHG 121 Query: 152 CYAMNNKQMQEIYAIV 167 C +NN + E+ A Sbjct: 122 CIRLNNDAIIELAAWA 137 >gi|154483441|ref|ZP_02025889.1| hypothetical protein EUBVEN_01144 [Eubacterium ventriosum ATCC 27560] gi|149735693|gb|EDM51579.1| hypothetical protein EUBVEN_01144 [Eubacterium ventriosum ATCC 27560] Length = 370 Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 60/196 (30%), Gaps = 47/196 (23%) Query: 7 ILLFALFIFLNGCHHSR---------SLIDKAEHPLSEN-LIISMQKKRTSPFHPTVIRI 56 ILL + IF GC S A+ + E ++ + HP I++ Sbjct: 16 ILLLNIAIFTVGCSSKSVDSKETTTNSETTVAQTTVPETTIVNYKKLINFKAEHPFYIKV 75 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 K EN ++ + +Y + + +C+ D P G + + Sbjct: 76 NKKENFAIVYGIDKKGKYSVPYKAFVCSTG-------REDDF-TPNGTFTVSEKYRWR-- 125 Query: 117 KYFLSINIGFPNEFDKAHNRTGADLMIH--------------------GECASAGCYAMN 156 + + N + + R +M+H G AS GC Sbjct: 126 -----LMVD--NTYAQYAVRIQGQIMLHSVPYTSPESDALEYWEYNKLGNVASLGCVRFQ 178 Query: 157 NKQMQEIYAIVRDSLR 172 ++ IY + + Sbjct: 179 VADIKWIYDNCPEGTK 194 >gi|150389053|ref|YP_001319102.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens QYMF] gi|149948915|gb|ABR47443.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens QYMF] Length = 280 Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 33/130 (25%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P I I + IL + + +L+ Y + P P G + I Sbjct: 83 PTEGYAIDIDLEQRILTLKQYT-----EILQSYPVAVGK-PQTP--------TPPGDWRI 128 Query: 108 GWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNK 158 LNP + + I P G IHG A S GC M N+ Sbjct: 129 IQKTLNPGGPFGTRWMRINIP------WGGYG----IHGTDAPESIGTAASNGCIRMFNE 178 Query: 159 QMQEIYAIVR 168 ++ +Y IV Sbjct: 179 DVEVLYDIVP 188 >gi|283850406|ref|ZP_06367695.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B] gi|283574432|gb|EFC22403.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B] Length = 273 Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 69/250 (27%), Gaps = 85/250 (34%) Query: 1 MTNRYNIL-LFALFIFLNGCHHSRSLID----KAEHPLSENLIISMQKKRTSPFHPTVIR 55 M R +L L AL +F+ C + S A P + ++ ++ + Sbjct: 1 MRFRSPVLVLLALTLFVPACQTASSRPRTEPVAASGPATPASPLAGSRQLVLVVAESF-- 58 Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGT---------------FGPKIETGDEQA 100 N+ L ++R D + + + + G GP GD ++ Sbjct: 59 -NDNQARLRRFERGGDGAWRPVGD-DVAVTIGKNGMAWGRGLQGPPPAEGPVKIEGDGRS 116 Query: 101 PEGFY-------------YIGWNN------------------------------------ 111 P G + + Sbjct: 117 PAGVFAFGTAFAYQPQDLWTTPKMPVHRVTDQTVCVETINSASYNRILDENTAATKDWTS 176 Query: 112 ----LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQE 162 L P+ Y + + + N D G+ + H G + GC AMN + Sbjct: 177 PDRMLRPDGLYRFGLMVDY-NAPDTVPG-AGSCIFFHLWRRPGAP-TVGCTAMNEPAILA 233 Query: 163 IYAIVRDSLR 172 + A + S + Sbjct: 234 VLAWMDASKK 243 >gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synechocystis sp. PCC 6803] gi|1001486|dbj|BAA10111.1| slr0769 [Synechocystis sp. PCC 6803] Length = 204 Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 49/170 (28%), Gaps = 31/170 (18%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 G S TS T I + E + ++ + +L Sbjct: 40 GSAIPPLKPIPESTYTPPAAPTSTPSNPTSQALATHIVLVLGERKVYAYQND-----KVL 94 Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYI-----GWNNLNPNSKYFLSINIGFPN--EF 130 Y + G K P+G + + NP + ++ ++ P + Sbjct: 95 ASYPVA-----VGKKGWE----TPQGNFQVIQMVENPVWENPWNGKKVAASLDGPIGIRW 145 Query: 131 DKAHNRTGADLMIHGECA----------SAGCYAMNNKQMQEIYAIVRDS 170 + + HG S GC M N+ + ++ +V++ Sbjct: 146 IGFWSDGKNTIGFHGTPKKHEHFLGTAASHGCVRMRNQDVVALFNMVQNG 195 >gi|167464376|ref|ZP_02329465.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383048|ref|ZP_08056876.1| murein transglycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152817|gb|EFX45442.1| murein transglycosylase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 230 Score = 44.1 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 43/184 (23%) Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDK 132 +VL+ +I + G K +T P G + + N S + I + P Sbjct: 54 WVLVDGKRIKQFPVGLG-KQKT---PTPIGEFTVINKYKNWGSGFGTRWIGLNVP----- 104 Query: 133 AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDSLR------------ 172 G IHG S GC M N+ ++ +Y V+ + Sbjct: 105 -WGIYG----IHGTNRPDSIGRHQSHGCIRMYNRNVEILYEWVKIGTKVTIYGHPLGPPY 159 Query: 173 ------GNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNHQEPFIQI 226 S I +Q +R+ S + N F +L FEK+H P + Sbjct: 160 EDPRPLAAGDSGIDVQLIQYRLKSAG--YFNGICNGKFGPQTELALKRFEKDHDLPIDGV 217 Query: 227 INKQ 230 + +Q Sbjct: 218 MGRQ 221 >gi|300813344|ref|ZP_07093695.1| excinuclease ABC, A subunit [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512487|gb|EFK39636.1| excinuclease ABC, A subunit [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 1208 Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 36/135 (26%), Gaps = 35/135 (25%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW---------SGTFG--PKIET 95 P I + K+ IL ++ + L +Y + G G K Sbjct: 1022 PPSKGYWIAVNKSRRILTMYMGDKS-----LGKYPVTLGTSATQTPSGRGKIGNMHKNPA 1076 Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 G Y + N + + +G + HG Sbjct: 1077 WGGM--NGKYKPVAADDPKNPLGERWMGLS-------LKGFSGYGI--HGNIKPHQIGGY 1125 Query: 149 -SAGCYAMNNKQMQE 162 S GC M N ++E Sbjct: 1126 YSNGCIRMFNYDIEE 1140 >gi|84685769|ref|ZP_01013665.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84665862|gb|EAQ12336.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Rhodobacterales bacterium HTCC2654] Length = 203 Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 58/191 (30%), Gaps = 32/191 (16%) Query: 1 MTNRYNILLFALFIFLNGCHHSRS---LIDKAEHPLSENLIISMQKKRTSPFHPTV---- 53 M R + + G + + + E LSE + ++ RT + P Sbjct: 12 MGRRTFLTTSVAAVGALGVAPALAQTENSTEVERDLSEVVRRNISSFRTLDWRPYFDNLN 71 Query: 54 ---IRIFKNENILEIWKRNVDAEYVLLKE-YKICAWSGTFG----PKIETGDEQAPEGFY 105 I + L W N D Y L + G + G PE + Sbjct: 72 NGAILVDITSRALHFW--NNDGVYKLYPTSVPLTEDLTRRGRTSVTRKVEG----PE--W 123 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG-ADLMIHGEC--------ASAGCYAMN 156 + N ++ I G N G IHG +S GC + Sbjct: 124 RPTPSMKERNPEWPDFIPAGPGNPLGTHALYLGWQYYRIHGTHDTRKIGRRSSNGCIGLY 183 Query: 157 NKQMQEIYAIV 167 N+ + E++++ Sbjct: 184 NENIAELFSLA 194 >gi|295394786|ref|ZP_06805001.1| lipoprotein [Brevibacterium mcbrellneri ATCC 49030] gi|294972382|gb|EFG48242.1| lipoprotein [Brevibacterium mcbrellneri ATCC 49030] Length = 263 Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 38/139 (27%) Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG---WNNLNPN 115 N + L +++ D E+ +K + + GDE P G + + +P Sbjct: 101 NTSTLNMYEY-RDNEWQQVKSFASHNGRAGWRENRTEGDETTPAGVFSLSDAGGTLKDPG 159 Query: 116 SKYFLS------------------------INIGF-------PNEFDKAHNRT-GADLMI 143 SK S I I F P ++ + G + + Sbjct: 160 SKLPYSQDVNLSATAQNVYGPDYAQVFDYVIAIDFNRVTGTAPTNTERPQGKKIGGGIWL 219 Query: 144 HGEC--ASAGCYAMNNKQM 160 H + + GC + +M Sbjct: 220 HVDHGKGTNGCVTVQKNEM 238 >gi|329922685|ref|ZP_08278237.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5] gi|328942027|gb|EGG38310.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5] Length = 114 Score = 43.7 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 33/127 (25%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 I + ++ L + N+ +++ + + Q+P G Y I Sbjct: 4 PQYRIIVDLSDFQLHLLDGNI-----VVRTFPVAIGKMAT---------QSPPGNYTIVN 49 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQ 161 NP + + +G ++ + HG S GC M N+ + Sbjct: 50 KQPNPGGPF-GAYWLG--------LSKPHYGI--HGTNDPSSIGRSVSHGCIRMYNEDVV 98 Query: 162 EIYAIVR 168 E+ ++V Sbjct: 99 ELASLVP 105 >gi|209525406|ref|ZP_03273946.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328] gi|209494086|gb|EDZ94401.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328] Length = 208 Score = 43.7 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/173 (10%), Positives = 45/173 (26%), Gaps = 32/173 (18%) Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPF---HPTVIRIFKNENILEIWKRNVDA 72 L+ + + + + K + + E + +++ Sbjct: 43 LSASGSAPRIYPYQSLLNPDVPPLDDPSKFLPLGEQQAQLKLVLRLGERRVYVYRGESQ- 101 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN--SKYFLSINIGFPN-- 128 + Y + + P G + + NP + + + PN Sbjct: 102 ----IASYPVAVGKPG---------WETPTGTFQVTEKVENPQWQNPWTGEVRPAGPNSA 148 Query: 129 ---EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDS 170 + + + HG AS GC M N+ + ++ V Sbjct: 149 LGLRWIGFWHDGKDAIGFHGTPTVNSIGQAASHGCVRMRNEDIVALFEKVEMG 201 >gi|262372118|ref|ZP_06065397.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205] gi|262312143|gb|EEY93228.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205] Length = 402 Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 43/152 (28%), Gaps = 50/152 (32%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P +I K L ++ ++ ++ + S D +P G Y + Sbjct: 265 PEDIHLIVAHKGARQLYLF----NSRNQMIASFPATIGST---------DTPSPTGTYKV 311 Query: 108 GWNNLNPNSKY------------FLSINIGFPNEFDKAHNRTGADLMI---------HGE 146 NP Y LS+ G PN ++ I HG Sbjct: 312 VGVAKNPWYSYSPSNFVQGNNLKPLSLPPG-PNA-------PVGNIWIGLSKKSFGIHGT 363 Query: 147 CA--------SAGCYAMNNKQMQEIYAIVRDS 170 + S GC + N ++ VR Sbjct: 364 PSPSLISKTASHGCIRLTNWDANDLGNKVRSG 395 >gi|284045118|ref|YP_003395458.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684] gi|283949339|gb|ADB52083.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684] Length = 345 Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 40/153 (26%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 + + + + + +P VI + + L +WK L K Y + Sbjct: 199 AAVVRPKVTTAQLAKQYPVVITVDRAAFRLSLWKN-----LRLAKSYTVAIGQIGLD--- 250 Query: 94 ETGDEQAPEGFYYI-----GWNNLNPNSKYFLSI-NIGFP----NEFDKAHNRTGADLM- 142 P G Y I PNS + + P N + Sbjct: 251 ------TPAGLYEIQNKAVDPVWSVPNSAWAGDLAGTTVPPGPSNPIKARW----LGIFD 300 Query: 143 ---IHGECA--------SAGCYAMNNKQMQEIY 164 IHG A S GC M + E+Y Sbjct: 301 GAGIHGTDAVYSLGTAASHGCVRMAIPDVIELY 333 >gi|333022840|ref|ZP_08450904.1| putative lipoprotein [Streptomyces sp. Tu6071] gi|332742692|gb|EGJ73133.1| putative lipoprotein [Streptomyces sp. Tu6071] Length = 237 Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 63/216 (29%), Gaps = 56/216 (25%) Query: 3 NRYNILLFALFIFLNGCHHSR-----SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF 57 + I A+ L C A P + + + +I Sbjct: 1 MKVLIGTAAVLALLTSCSGQDGGDGAKKDAAASSPAAHRAPEADPTRVPGVGDRLQGQIP 60 Query: 58 KNENIL-EIWKRNVDAEYVLL-------KEYKICA-WSGTFGPK-----IETGDEQAPEG 103 + ++ + VD+ + K +K A W G G K D+++P G Sbjct: 61 AASRQVVAVYGKGVDSADSTVVLYTKTGKTWKKSASWQGHNGKKGWTTAHHENDKRSPVG 120 Query: 104 FYY----------------------IGWNNLNPNSKYFLS---INIGF-------PNEFD 131 Y I + S + I I + PN+ Sbjct: 121 VYTLSDAGGVLADPGARLPYTQTASIQAPHYWSKSHWHDFDYVIAIDYNRVKGTAPNDPT 180 Query: 132 KAHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163 + +T G + + HG SA C +++ M+ + Sbjct: 181 RPEGQTKGGSIWLHMDHGSGTSA-CVSISKAGMKSL 215 >gi|212638810|ref|YP_002315330.1| erfK/srfK family protein [Anoxybacillus flavithermus WK1] gi|212560290|gb|ACJ33345.1| Uncharacterized erfK/srfK family protein, probably secreted [Anoxybacillus flavithermus WK1] Length = 167 Score = 43.7 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 36/138 (26%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I + K N L + + + Y++ PEG + + + Sbjct: 27 MIIVNKQTNQLAFIRHG-----KIERIYRVATGKTNV---------LTPEGLFTVTVKAV 72 Query: 113 NPNSKYFL--SINIGFPNE--------FDKAHNRTGADLMIHGECA--------SAGCYA 154 NP Y+ +I G PN FD A G IHG + GC Sbjct: 73 NP---YYRKKNIPGGAPNNPLGTRWIGFD-ARGTDGRTYGIHGTNRPESIGRYITEGCVR 128 Query: 155 MNNKQMQEIYAIVRDSLR 172 M+N+ ++ +Y V + Sbjct: 129 MHNRDVEALYPNVPLGTK 146 >gi|313887561|ref|ZP_07821244.1| ErfK/YbiS/YcfS/YnhG [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846439|gb|EFR33817.1| ErfK/YbiS/YcfS/YnhG [Peptoniphilus harei ACS-146-V-Sch2b] Length = 270 Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 32/136 (23%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG----TFGPKIETGDEQAPE 102 P I + K+ L ++K L ++ + +G + P Sbjct: 81 PPTSGNWIVVNKSRRTLTLYKGGQA-----LGKFPVTLGTGSTPTPSAKARIHNMHKNPA 135 Query: 103 -----GFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------S 149 G Y +N N + + P ++G + HG S Sbjct: 136 WGGMGGKYTPVASNDPNNPLGERWMGLSIP-------GKSGYGI--HGNIKPLQIGGYYS 186 Query: 150 AGCYAMNNKQMQ-EIY 164 GC M N ++ EI+ Sbjct: 187 NGCIRMFNYDIENEIF 202 >gi|318056857|ref|ZP_07975580.1| lipoprotein [Streptomyces sp. SA3_actG] Length = 244 Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 56/215 (26%) Query: 4 RYNILLFALFIFLNGCHHSR-----SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 + I A+ L C A P + + + +I Sbjct: 9 KVLIGTAAVLALLTSCSGQDGGDGVKKDAAASSPAAHRAPEADPTRVPGVGDRLQGQIPA 68 Query: 59 NENIL-EIWKRNVDAEYVLL-------KEYKICA-WSGTFGPK-----IETGDEQAPEGF 104 + ++ + +D+ + K +K A W G G K D+++P G Sbjct: 69 ASRQVVAVYGKGIDSADSTVVLYTKTGKTWKASASWQGHNGKKGWTTAHHENDKRSPVGV 128 Query: 105 YY----------------------IGWNNLNPNSKYFLS---INIGF-------PNEFDK 132 Y I + S + I I + PN+ + Sbjct: 129 YTLSDAGGVLADPGARLPYTQTASIQAPHYWSKSHWHDFDYVIAIDYNRVKGTAPNDPTR 188 Query: 133 AHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163 +T G + + HG SA C +++ M+ + Sbjct: 189 PEGQTKGGSIWLHMDHGSGTSA-CVSISKAGMKSL 222 >gi|284045782|ref|YP_003396122.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684] gi|283950003|gb|ADB52747.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684] Length = 274 Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 13/81 (16%) Query: 100 APEGFYYIGWNNLNPNS---KYFLSINIG-FPNEFDKAHNRTGADLMIHGEC-------- 147 P G Y++ PN ++ + + + + G + IHG Sbjct: 186 TPTGRYFVADLLRPPNPTGFYGPYALGLSAYSPVYTRFAGGDG-QVGIHGTNTPRVLGSD 244 Query: 148 ASAGCYAMNNKQMQEIYAIVR 168 S GC ++N + + +V Sbjct: 245 VSHGCIRVSNATVTRLATLVP 265 >gi|289642238|ref|ZP_06474388.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia symbiont of Datisca glomerata] gi|289507972|gb|EFD28921.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia symbiont of Datisca glomerata] Length = 317 Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 13/83 (15%) Query: 96 GDEQAPEGFYYIGWNNLNPNS---KYFLSINIG-FPNEFDKAHNRTGADLMIHGEC---- 147 GD P G +Y+ N + + F D R + IHG Sbjct: 225 GDTPTPGGKFYLTELLQPRNPAGAYGPYAFGLSGFSTTLDSFEGRA-PVIGIHGTNQPNL 283 Query: 148 ----ASAGCYAMNNKQMQEIYAI 166 S GC ++N+ + + + Sbjct: 284 LGQDVSHGCIRVSNETITRLARL 306 >gi|261417796|ref|YP_003251478.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61] gi|319767392|ref|YP_004132893.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52] gi|261374253|gb|ACX76996.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61] gi|317112258|gb|ADU94750.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52] Length = 168 Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 34/144 (23%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 +T+ ++ + K N L + + + Y + D P Sbjct: 17 APFQTAAEAKPLVIVNKAINKLALVRDG-----RIEAVYPVATGVNA--------DL-TP 62 Query: 102 EGFYYIGWNNLNPNSKYFL--SINIGFPN-----EFD--KAHNRTGADLMIHGECA---- 148 EG + + +P Y+ +I G PN + A G IHG Sbjct: 63 EGMFTVTVKAKHP---YYRKKNIPGGAPNNPLGTRWIGFNARGTDGRTYGIHGTNNPASI 119 Query: 149 ----SAGCYAMNNKQMQEIYAIVR 168 S GC M+N+ ++++Y V Sbjct: 120 GGYVSQGCVRMHNRNVEQLYERVP 143 >gi|187778003|ref|ZP_02994476.1| hypothetical protein CLOSPO_01595 [Clostridium sporogenes ATCC 15579] gi|187774931|gb|EDU38733.1| hypothetical protein CLOSPO_01595 [Clostridium sporogenes ATCC 15579] Length = 125 Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 33/138 (23%) Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99 + S I I + L +++ N + K YK+ P Sbjct: 4 YLYPYAQSSRAIYRIVINTKAHTLTLFRNNN-----VYKTYKVAVGK-PSTP-------- 49 Query: 100 APEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASA 150 P+G + I +NP + + + P + G IHG S Sbjct: 50 TPKGTFKIINRAINPGGPFGARWLGLNIP------YGDYG----IHGTNTPSSIGKSVSN 99 Query: 151 GCYAMNNKQMQEIYAIVR 168 GC M N Q+ E+ +V Sbjct: 100 GCIRMFNNQVIELSNLVP 117 >gi|51892719|ref|YP_075410.1| hypothetical protein STH1581 [Symbiobacterium thermophilum IAM 14863] gi|51856408|dbj|BAD40566.1| conserved domain protein [Symbiobacterium thermophilum IAM 14863] Length = 354 Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 26/143 (18%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 +P PTVI + K N+L ++ + + + A P G + Sbjct: 204 VAPPEPTVIVVDKGLNVLWYYEDGELVQTARVSTGRHVAGPAPSPDNWTEN-LLTPTGRF 262 Query: 106 YIGWNNLNPNSKYFL----SINIGFP-NEFDKAH-NRT-----GADLM-IHGEC------ 147 + + P Y+ +++ P N T G L IHG Sbjct: 263 TVT--LMVPGMPYYKEGIDALD---PANPLGTRWIGFTVFEGDGGSLWAIHGTNAPEALG 317 Query: 148 --ASAGCYAMNNKQMQEIYAIVR 168 S G M+N +++++Y V Sbjct: 318 RWNSEGSIVMSNGEVEQLYERVE 340 >gi|329941663|ref|ZP_08290928.1| lipoprotein [Streptomyces griseoaurantiacus M045] gi|329299380|gb|EGG43280.1| lipoprotein [Streptomyces griseoaurantiacus M045] Length = 263 Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 60/207 (28%), Gaps = 57/207 (27%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKK--RTSPFHPTVIRI-----FKNENIL 63 L + L C S ++ +S + + R+ + ++ Sbjct: 34 VLLMSLAACGGSDGGGNQKTDGVSAVRTGQAKARTTGLKAIPEVGDRLRGQIPATSRQVV 93 Query: 64 EIWKRNVDAEYVLLKEY--------KICAWSGTFGPK-----IETGDEQAPEGFYYIG-- 108 ++ +A + Y + W G G K GD ++P G + + Sbjct: 94 AVYGEGRNATGSTIALYTKHGSTWDRTRVWQGHNGKKGWTTDHHEGDNRSPVGVFTLSDA 153 Query: 109 --------------------WNNLNPNSKYFLS---INIGF-------PNEFDKAHNRT- 137 + S + I I + PNE + ++ Sbjct: 154 GGVLADPGAKLPYTRSASFQAPHYWSKSHWHDFDYVIAIDYNRVKGTSPNEPTRPEGQSK 213 Query: 138 GADLMI---HGECASAGCYAMNNKQMQ 161 G + + HG SA C +++ M+ Sbjct: 214 GGSIWLHMDHGSGTSA-CVSLSKSGME 239 >gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacillus clausii KSM-K16] gi|81365181|sp|Q5WC42|YKUD_BACSK RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore protein YkuD homolog gi|56911541|dbj|BAD66068.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 165 Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 41/130 (31%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + +++ L + ++K Y I Q P G + I Sbjct: 56 PYEIHVSLSQHQLTLLHNGS-----VVKIYPIAVGKMLT---------QTPTGNFVIVNK 101 Query: 111 NLNPNSKY---FLSI-NIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNK 158 NP + ++S+ + + IHG S GC M+NK Sbjct: 102 APNPGGPFGTMWMSLSKLHYG---------------IHGTNDPSSIGKSVSHGCIRMHNK 146 Query: 159 QMQEIYAIVR 168 ++E+ A V Sbjct: 147 DVEELAATVP 156 >gi|15965344|ref|NP_385697.1| hypothetical protein SMc01200 [Sinorhizobium meliloti 1021] gi|307312718|ref|ZP_07592349.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C] gi|15074524|emb|CAC46170.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306899443|gb|EFN30075.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C] Length = 193 Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 49/184 (26%), Gaps = 29/184 (15%) Query: 3 NRYNILLFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R ++L +L +F +GC S A + + P I + E Sbjct: 7 TRRVLVLGSLALFASGCSSLRSADSPQSARTRIDPR-YRRQEVAYYGGESPGTIVVNTEE 65 Query: 61 NILEIWKRNVDAEYVLLKEYKI--------CAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 L + + + Y I G K P I Sbjct: 66 RYLY-YVQGGGSAVR----YGIGVGEEGRTLKGRAKIGRKA-EWPSWTPTAN-MIRRKPH 118 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGAD---LMIHGE--CASAG------CYAMNNKQMQ 161 +S + P + G + +HG + G C + N + Sbjct: 119 LAQYAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGTNEPWTIGQAVSSGCIRLTNDDIV 178 Query: 162 EIYA 165 ++Y+ Sbjct: 179 DLYS 182 >gi|119511704|ref|ZP_01630808.1| ErfK/YbiS/YcfS/YnhG-like protein [Nodularia spumigena CCY9414] gi|119463613|gb|EAW44546.1| ErfK/YbiS/YcfS/YnhG-like protein [Nodularia spumigena CCY9414] Length = 237 Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 35/172 (20%) Query: 16 LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV----IRIFKNENILEIWKRNVD 71 ++G S P L ++ PT + + ++ ++K Sbjct: 71 MSGAVSQNSAGSTELLPKMRALFPGQRQNSQGLSSPTSSQTEVVVNLSDRRTYVYKGG-- 128 Query: 72 AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD 131 ++ Y I + G + P G + I P ++ ++ + FP+ D Sbjct: 129 ---EVIASYPIAIG--------KEG-WETPTGSFRITDKQKYPIWQHPITGKV-FPSGAD 175 Query: 132 KAHNRT-------GAD-LMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 G + + HG S GC M N ++ +Y V Sbjct: 176 SPLGERWIGFWSDGRNEIGFHGTPDTHLLGAAISHGCLRMRNDDVRLLYEQV 227 >gi|260881076|ref|ZP_05403544.2| ErfK/YbiS/YcfS/YnhG family protein [Mitsuokella multacida DSM 20544] gi|260849442|gb|EEX69449.1| ErfK/YbiS/YcfS/YnhG family protein [Mitsuokella multacida DSM 20544] Length = 412 Score = 43.4 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 39/127 (30%), Gaps = 23/127 (18%) Query: 100 APEGFYYIGWNNLNP----NSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC-------- 147 P G+Y + +NP SI G N G + IHG Sbjct: 108 TPTGYYKVIDKEVNPTWTDPGDASASIPSGPSNPLGYRWIGIGGNYGIHGTNRPESIGHY 167 Query: 148 ASAGCYAMNNKQMQEIYAIVRDS-----------LRGNMQSHIQIQAFPFRMTSKNMQLY 196 S GC M+ + +++IY +V + I +P +N+ Sbjct: 168 VSNGCIRMHEEDVEKIYDMVEVGTPVEITYNRIVVEKTPDDQIAYYIYPDGYGWQNVTTA 227 Query: 197 QNNPNYS 203 N + Sbjct: 228 DVNKWLA 234 >gi|253577644|ref|ZP_04854953.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251842971|gb|EES71010.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 112 Score = 43.4 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 33/125 (26%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I + ++ +L + N +++ + + + Q P G Y I Sbjct: 4 YRIIVDISDRMLYLLDNNN-----VVRGFPVGIGTMLT---------QTPVGSYTIVNKA 49 Query: 112 LNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEI 163 NP + + +G ++ + HG S GC M N + E+ Sbjct: 50 PNPGGPF-GAYWMG--------LSKPHYGI--HGTDDPSSIGKEVSHGCIRMYNPDVIEL 98 Query: 164 YAIVR 168 IV Sbjct: 99 ARIVP 103 >gi|291443449|ref|ZP_06582839.1| secreted protein [Streptomyces roseosporus NRRL 15998] gi|291346396|gb|EFE73300.1| secreted protein [Streptomyces roseosporus NRRL 15998] Length = 236 Score = 43.4 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 59/225 (26%), Gaps = 71/225 (31%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENL------IISMQKKRTSPFHPTVIRI 56 R +++ A+ + L G + PL + L + + T Sbjct: 1 MRRSLVTAAVLLALAGSLGAAPADASDVPPLPDRLADTGGGTQLITAEAPDTGSTTGTVT 60 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTF--GPKIETGDEQAPEGFYYIGW----- 109 W + + G E G P G + + + Sbjct: 61 ---------WWERRGGRWAEAGSAPARFGANGLAEGATREQGTSTTPTGLFDLPYAFGIE 111 Query: 110 ----------NNLNPNS-----------------------------------KYFLSINI 124 +N +S +Y ++ I Sbjct: 112 DAPAGTTYPYRKVNEDSWWCQDNDSVAYNRWVEPRPAHCRAAEAEHLVSYGTQYARALVI 171 Query: 125 GFPNEFDKAHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIV 167 GF N NR GA + +H G A+AGC ++ M EI A Sbjct: 172 GF-NYEQPVRNR-GAGIFLHVNGRGATAGCVSVPADAMAEILAWA 214 >gi|329929360|ref|ZP_08283108.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5] gi|328936447|gb|EGG32892.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5] Length = 468 Score = 43.4 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 41/135 (30%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 P + I + + L + + LL+ Y++ + P G ++I Sbjct: 322 EQPLQVIIDRKRHRLAVVSGGI-----LLRNYEVGLGGA-----------KTPLGDFHIN 365 Query: 109 WNNLNPNS-----KYFLSINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAM 155 +NPN + + D + IHG S GC M Sbjct: 366 DKVVNPNGTTKGPYGTRGMQLS-----DTLYA-------IHGTLDMDSIGANESEGCIRM 413 Query: 156 NNKQMQEIYAIVRDS 170 + ++E++ +V Sbjct: 414 LTEDVEELFDLVPMG 428 >gi|255320554|ref|ZP_05361734.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82] gi|255302404|gb|EET81641.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82] Length = 169 Score = 43.4 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 43/135 (31%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN--LNPNSKYFLS----------- 121 L K Y I + G + Q P G++ I +P + F++ Sbjct: 24 KLKKCYAISSGKNGVGE--QENTGQTPRGWHRIEKKIGAEHPKNSVFIARQFTDEIYSPE 81 Query: 122 INIGFPNEFDKAHNR--------TGAD-----------LMIHGECA--------SAGCYA 154 + FP D R G + + IHG S GC Sbjct: 82 LAAQFPQR-DWILTRILWLHGLEPGFNQGEGRDTFQRYIYIHGTPDTEPMGIPMSHGCIR 140 Query: 155 MNNKQMQEIYAIVRD 169 M N+++ E++ ++ + Sbjct: 141 MRNEEIIELFDLIPE 155 >gi|82702355|ref|YP_411921.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196] gi|82410420|gb|ABB74529.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196] Length = 159 Score = 43.4 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 42/142 (29%), Gaps = 43/142 (30%) Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN------------LNPNS 116 ++ + +++ Y+I + G E G P G + I P Sbjct: 13 DLHDKNAVVRRYRISSAKNGVG--QENGSFCTPLGRHIIRAKIGTDQPVNTVFVKRRPTG 70 Query: 117 KYFL-SINIGFPNEFDKAHNR--------TGAD-----------LMIHGECAS------- 149 + + FP D R G + + IHG S Sbjct: 71 EIYTPEFAANFP-RRDWILTRILWLSGCEPGFNRLGKVDTMRRYIYIHGTPDSVEMGKPG 129 Query: 150 -AGCYAMNNKQMQEIYAIVRDS 170 GC M N+ + E++ +V Sbjct: 130 SIGCIRMRNQDLLELFDLVEAG 151 >gi|332798862|ref|YP_004460361.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1] gi|332696597|gb|AEE91054.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1] Length = 176 Score = 43.4 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 18/76 (23%) Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAG 151 P G + I ++ + + P G IHG S+G Sbjct: 21 TPIGVFTITQKDIWSGEFGSRWMRLSVP------WGIYG----IHGTNKPWSIGTFESSG 70 Query: 152 CYAMNNKQMQEIYAIV 167 C M N ++++Y V Sbjct: 71 CIRMYNTHVEQVYEWV 86 >gi|148378889|ref|YP_001253430.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. ATCC 3502] gi|153933529|ref|YP_001383270.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. ATCC 19397] gi|153934554|ref|YP_001386819.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. Hall] gi|148288373|emb|CAL82450.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 3502] gi|152929573|gb|ABS35073.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. ATCC 19397] gi|152930468|gb|ABS35967.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str. Hall] gi|322805217|emb|CBZ02781.1| protein erfK/srfK precursor [Clostridium botulinum H04402 065] Length = 125 Score = 43.4 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 33/141 (23%) Query: 37 LIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 ++ + S I I + L +++ N + + YK+ P Sbjct: 1 MLYYLYPYNQSYRSIYHIIINTQTHTLTLFRGNN-----VYRTYKVAVGK-PSTP----- 49 Query: 97 DEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 P+G + I +NP + + + P + G IHG Sbjct: 50 ---TPKGNFKIINRAINPGGPFGARWLGLNIP------YGDYG----IHGTNNPSSIGKS 96 Query: 149 -SAGCYAMNNKQMQEIYAIVR 168 S GC M N Q+ E+ +V Sbjct: 97 VSNGCIRMFNNQVIELSNLVP 117 >gi|296132569|ref|YP_003639816.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR] gi|296031147|gb|ADG81915.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR] Length = 279 Score = 43.4 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 50/171 (29%), Gaps = 36/171 (21%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQ---KKRTSPFHPTVIRIFKNENILEI 65 +F +S KA+ + + ++ +P I I L + Sbjct: 40 VFDPATANAVVAFQKSRGLKADGVVGPDTWSALGTDMAVSAAPGQGYRIFIDTERFRLSL 99 Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINI 124 +K V + + P P G + I +NP + + I Sbjct: 100 FKDGVHQ-----AAWPVAVGK-PSTP--------TPIGDWVITEKIMNPGGPFGARWMRI 145 Query: 125 GFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 P G IHG S GC M N+ + ++Y IV Sbjct: 146 SVP------WGGYG----IHGTDNPASIGTAASHGCIRMYNEDVIKLYDIV 186 >gi|312111310|ref|YP_003989626.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1] gi|311216411|gb|ADP75015.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1] Length = 165 Score = 43.4 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 33/128 (25%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I I + L + K +++ Y I G + I Sbjct: 56 PYTIHISVSRRQLTLKKNGS-----IVRIYPIAVGKMVTA---------TLVGDFVIVNR 101 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP + +I + + G IHG S GC M+NK + E Sbjct: 102 QPNPGGPF-GAIWLS------LSKIHYG----IHGTNNPSSIGKYVSKGCIRMHNKDVLE 150 Query: 163 IYAIVRDS 170 + ++V + Sbjct: 151 LASLVPNG 158 >gi|261408377|ref|YP_003244618.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10] gi|261284840|gb|ACX66811.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10] Length = 468 Score = 43.4 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 25/127 (19%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 P + I + + L + + LL+ Y + + P G ++I Sbjct: 322 EQPLQVIIDRKRHRLAVVSGGI-----LLRNYAVGLGGA-----------KTPLGDFHIN 365 Query: 109 WNNLNPNS-----KYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEI 163 +NPN + + N H D+ G S GC M + ++E+ Sbjct: 366 DKVVNPNGTTKGPYGTRGMQLS--NTLYAIHGT--LDVDSIGANESEGCIRMLTEDVEEL 421 Query: 164 YAIVRDS 170 + +V Sbjct: 422 FDLVPMG 428 >gi|218440556|ref|YP_002378885.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7424] gi|218173284|gb|ACK72017.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7424] Length = 250 Score = 43.4 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 9/112 (8%) Query: 1 MTNRYNILLFAL----FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI 56 M +LF+ I L+GC + + + K P + I Sbjct: 1 MAKTIYYILFSFVMLNLIGLSGCTSEERQPELQTSQNPPIPVSN-SPKPELENKPFTLHI 59 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 + + I +N + I G PK + D P G + Sbjct: 60 NRASKQMTIIDKNGAEVMKV----PIGIGRGGLKPKRDMMDLVTPTGELVVD 107 >gi|327440243|dbj|BAK16608.1| uncharacterized protein [Solibacillus silvestris StLB046] Length = 111 Score = 43.4 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 31/98 (31%), Gaps = 30/98 (30%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKA 133 L+K Y I P P G Y I LNP + + L + + P Sbjct: 21 KLIKAYPIAVGK-ILTP--------TPSGTYTIINKQLNPPAPFGVLWMGLSKP------ 65 Query: 134 HNRTGADLMIHGECA--------SAGCYAMNNKQMQEI 163 G IHG S GC M N + E+ Sbjct: 66 --HYG----IHGTNNPASIGKNRSHGCIRMFNHDVLEL 97 >gi|260467165|ref|ZP_05813343.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum WSM2075] gi|259029089|gb|EEW30387.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum WSM2075] Length = 505 Score = 43.0 bits (100), Expect = 0.032, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 44/160 (27%) Query: 35 ENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 II + P I K + E++ + L+ Y S Sbjct: 343 PGTIIKVANFGKLVSTPVARIVADKGKK--EVYAYDAGG--KLVAAYPATIGSA------ 392 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF--------------PN----EFDKAHN 135 D +P G + + L+PN Y + NI F PN A + Sbjct: 393 ---DTPSPTGIHTVSRIALDPNYTY--NPNINFKQGQNDKILTIPPGPNGPVGSVWIALD 447 Query: 136 RTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 + + HG S GC + N +E+ +V Sbjct: 448 KPTYGI--HGTPEPSKIGKTESHGCVRLTNWDARELAKLV 485 >gi|152985553|ref|YP_001350133.1| hypothetical protein PSPA7_4791 [Pseudomonas aeruginosa PA7] gi|150960711|gb|ABR82736.1| hypothetical protein PSPA7_4791 [Pseudomonas aeruginosa PA7] Length = 354 Score = 43.0 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 25/127 (19%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 SP P I + E I++ + I + + G K P G Sbjct: 58 EVSPQGPVTIVVSLTEQKAYIYRNGIA----------IGVSTLSSGKKGRE----TPTGV 103 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQ 159 + I +++ S + S + + T + +H G AS GC + Sbjct: 104 FSILQKSVDHKSDLYNSAPMPY------MQRLTWDGIALHAGNLPGYPASHGCIRLPMAF 157 Query: 160 MQEIYAI 166 +++Y I Sbjct: 158 AKKLYGI 164 >gi|290962314|ref|YP_003493496.1| lipoprotein [Streptomyces scabiei 87.22] gi|260651840|emb|CBG74967.1| putative lipoprotein [Streptomyces scabiei 87.22] Length = 238 Score = 43.0 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 61/211 (28%), Gaps = 62/211 (29%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVI-----RIFKN-----E 60 AL + L C S + PT I R+ K Sbjct: 6 ALVMSLTACGGSGGTNGATTSDTGARKSRGTGRSEARTVDPTRIPDVGDRLQKQIPAESR 65 Query: 61 NILEIWKRNVDAEYVLLKEY--------KICAWSGTFGPK-----IETGDEQAPEGFYYI 107 ++ ++ + D + Y K +W G G K GD+++P G + + Sbjct: 66 QVVAVYGKGEDDADATVVLYTKTGSAWKKTRSWEGHNGKKGWTTDHREGDKRSPVGVFTL 125 Query: 108 --------GWNNLNPNSK-----------------YFLSINIGFPN------EFD--KAH 134 P S+ + I I + N D + Sbjct: 126 SDAGGVLADPGAKLPYSRSASFQAPHYWAKSHWHDFDYVIAIDY-NRVKGTSPIDPTRPE 184 Query: 135 NRT-GADLMI---HGECASAGCYAMNNKQMQ 161 ++ G + + HG SA C +++ M+ Sbjct: 185 GQSKGGSIWLHMDHGSGTSA-CVSLSKSGME 214 >gi|302523338|ref|ZP_07275680.1| lipoprotein [Streptomyces sp. SPB78] gi|302432233|gb|EFL04049.1| lipoprotein [Streptomyces sp. SPB78] Length = 244 Score = 43.0 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 55/177 (31%), Gaps = 58/177 (32%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 + + P + ++++ K TV+ K WK++ W G Sbjct: 63 QGQIPAASRQVVAVYGKGIDSADSTVVLYTKTGKT---WKKSAS-------------WQG 106 Query: 88 TFGPK-----IETGDEQAPEGFYY----------------------IGWNNLNPNSKYFL 120 G K D+++P G Y I + S + Sbjct: 107 HNGKKGWTTAHHENDKRSPVGVYTLSDAGGVLADPGARLPYTQTASIQAPHYWSKSHWHD 166 Query: 121 S---INIGF-------PNEFDKAHNRT-GADLMI---HGECASAGCYAMNNKQMQEI 163 I I + PN+ + +T G + + HG SA C +++ M+ + Sbjct: 167 FDYVIAIDYNRVKGTAPNDPTRPEGQTKGGSIWLHMDHGSGTSA-CVSISKAGMKSL 222 >gi|297529480|ref|YP_003670755.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3] gi|297252732|gb|ADI26178.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3] Length = 168 Score = 43.0 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 34/144 (23%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 +T+ ++ + K N L + + + Y + T D P Sbjct: 17 APFQTAAEAKPLVIVNKAINKLALVRDG-----RIEAVYPVATGVNT--------DL-TP 62 Query: 102 EGFYYIGWNNLNPNSKYFL--SINIGFPN-----EFD--KAHNRTGADLMIHGECA---- 148 EG + + +P Y+ +I G PN + A G IHG Sbjct: 63 EGMFTVTVKAKHP---YYRKKNIPGGAPNNPLGTRWIGFNARGTDGRTYGIHGTNNPASI 119 Query: 149 ----SAGCYAMNNKQMQEIYAIVR 168 S GC M+N+ ++ +Y V Sbjct: 120 GGYVSQGCVRMHNRDVEHLYERVP 143 >gi|119897880|ref|YP_933093.1| hypothetical protein azo1589 [Azoarcus sp. BH72] gi|119670293|emb|CAL94206.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 159 Score = 43.0 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 59/161 (36%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 IRI L ++ + ++ Y + + G G P G + I Sbjct: 3 IRIDLGSQTLALF----GDDGACIRRYPVSTAANGPGE--REGSGCTPRGRHRIRAAI-- 54 Query: 114 PNSKYFLSINIGF-------------PNEFDKAHNR--------------TGAD------ 140 ++ IG P A R G + Sbjct: 55 -----GRAMPIGTVFRGRRPTGEIWTPALAAAAPGRDWILSRILWLCGEEPGRNRLGEVD 109 Query: 141 -----LMIHGE--------CASAGCYAMNNKQMQEIYAIVR 168 + IHG S GC M N+++ E++ +VR Sbjct: 110 TMRRYVYIHGTGDDQPMGTPRSHGCIRMRNREVVELFDLVR 150 >gi|255526573|ref|ZP_05393481.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7] gi|296187551|ref|ZP_06855946.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7] gi|255509758|gb|EET86090.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7] gi|296048073|gb|EFG87512.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7] Length = 125 Score = 43.0 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 33/138 (23%) Query: 40 SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99 + S I+I + L +++ N + K Y++ P Sbjct: 4 YLYPYTQSYRAKYYIKINTQSHTLTLFRNNS-----IYKTYRVAVGK-PSTP-------- 49 Query: 100 APEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SA 150 P+G + I +NP + + + P + G IHG S Sbjct: 50 TPKGTFKIINRAINPGGPFGSRWLGLNAP------YGDYG----IHGTNTPSSIGKSISN 99 Query: 151 GCYAMNNKQMQEIYAIVR 168 GC M N Q+ E+ +V Sbjct: 100 GCIRMFNNQVIELSNLVP 117 >gi|225389541|ref|ZP_03759265.1| hypothetical protein CLOSTASPAR_03289 [Clostridium asparagiforme DSM 15981] gi|225044405|gb|EEG54651.1| hypothetical protein CLOSTASPAR_03289 [Clostridium asparagiforme DSM 15981] Length = 256 Score = 43.0 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 17/43 (39%) Query: 66 WKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 ++++ + + L + G + GD + PEG Y Sbjct: 88 YRKDENGAWQLAWKEAGIVGRGGITDEKREGDGKTPEGTYRFT 130 >gi|138895936|ref|YP_001126389.1| protein ErfK/SrfK [Geobacillus thermodenitrificans NG80-2] gi|196248827|ref|ZP_03147527.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16] gi|134267449|gb|ABO67644.1| Protein ErfK/SrfK precursor [Geobacillus thermodenitrificans NG80-2] gi|196211703|gb|EDY06462.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16] Length = 168 Score = 43.0 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 34/133 (25%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++ + K N L + + + Y + PEG + + Sbjct: 28 LVIVNKAINKLALIRDG-----RIEAVYPVATGMNA---------GLTPEGMFTVTVKAE 73 Query: 113 NPNSKYFL--SINIGFPN-----EFDKAHNR-TGADLM-IHGECA--------SAGCYAM 155 NP Y+ I G PN + + R T + +HG S GC M Sbjct: 74 NP---YYRKKGIPGGAPNNPLGTRWIGFNARGTDGRIYGVHGTNNPASIGGYVSQGCVRM 130 Query: 156 NNKQMQEIYAIVR 168 +N+ ++ +Y V Sbjct: 131 HNRDVEHLYERVP 143 >gi|308068757|ref|YP_003870362.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681] gi|305858036|gb|ADM69824.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681] Length = 112 Score = 43.0 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 33/118 (27%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + ++ L + + ++ Y + Q P G + I N Sbjct: 6 IVVDLSDRRLYLKDGD-----QIVLSYPVGIGKLAT---------QTPHGQFTIINKQPN 51 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE--CASAG------CYAMNNKQMQEI 163 P + + +G ++ + HG S G C M NK + E+ Sbjct: 52 PGGPF-GAFWMG--------LSKPHYGI--HGTNEPWSIGKLVSHGCIRMQNKDVLEL 98 >gi|302390876|ref|YP_003826696.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM 5501] gi|302202953|gb|ADL11631.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM 5501] Length = 171 Score = 43.0 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 37/137 (27%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I + LE+++ + LL Y + + P G + + N Sbjct: 8 IVINLEQRYLELYQNS-----ELLGHYPVAIGKAST---------PTPTGNFEVLLKRKN 53 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADL------MIHGECASAGCYAMNNKQMQEIYAIV 167 P ++ + + + +T + + G+ S GC M N +++IY V Sbjct: 54 PG----GALG----SRWIQFTWQT-HGIHGTNQPWLIGQAVSNGCVRMYNTDVKDIYKQV 104 Query: 168 RDSLRGNMQSHIQIQAF 184 I + Sbjct: 105 EVGT--------PIHIY 113 >gi|294011303|ref|YP_003544763.1| hypothetical protein SJA_C1-13170 [Sphingobium japonicum UT26S] gi|292674633|dbj|BAI96151.1| conserved hypothetical protein [Sphingobium japonicum UT26S] Length = 362 Score = 42.6 bits (99), Expect = 0.041, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 59/201 (29%), Gaps = 65/201 (32%) Query: 18 GCHHSRSLIDKAEHPLSENLI------ISMQKKRTSPFHPTV--IRIFKNENILEIWKRN 69 G + + A P++ ++ + P I + K++ +L + Sbjct: 186 GAGATIRVPAIANQPVARIEGDERGWGETLASLGVAKDQPQADHIVVDKSDGVLRAY--- 242 Query: 70 VDAEYVLLKEYKICAWSG--TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127 DA+ L+ ++ S P G + I + NP+ Y Sbjct: 243 -DAQNRLIAQFPATMGSQHDPL-----------PIGTWEIKGLSRNPDFHY--------- 281 Query: 128 NE---FD------KAHNRTG-----ADLMI---------HGECA--------SAGCYAMN 156 N +D KA + G + I HG S GC + Sbjct: 282 NPDLFWDASSTDEKAVLKPGPNGPVGVVWIDLSKPHYGIHGTPEPQTIGRTESHGCIRLT 341 Query: 157 NKQMQEIYAIVRDSLRGNMQS 177 N + +V+ ++ Q Sbjct: 342 NWDAARLAQMVQSGVKAVFQP 362 >gi|310641655|ref|YP_003946413.1| l,d-transpeptidase ykud [Paenibacillus polymyxa SC2] gi|309246605|gb|ADO56172.1| Putative L,D-transpeptidase YkuD [Paenibacillus polymyxa SC2] Length = 112 Score = 42.6 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 36/118 (30%), Gaps = 33/118 (27%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + ++ L + D ++ Y + Q P G + I N Sbjct: 6 IVVDLSDRRLYL----KDGS-QIVLSYPVGIGKVAT---------QTPHGQFTIINKQPN 51 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEI 163 P + + +G ++ + HG S GC M NK + E+ Sbjct: 52 PGGPF-GAFWMG--------LSKPHYGI--HGTNEPSSIGQMVSHGCIRMQNKDVLEL 98 >gi|218249099|ref|YP_002374470.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8801] gi|257062185|ref|YP_003140073.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8802] gi|218169577|gb|ACK68314.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8801] gi|256592351|gb|ACV03238.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8802] Length = 194 Score = 42.6 bits (99), Expect = 0.042, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 39/130 (30%), Gaps = 35/130 (26%) Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG-----WNNLN 113 + + ++ + +L Y + G K P+G + + N Sbjct: 76 KQRKVYAYQND-----KVLASYPVA-----IGKKGWE----TPKGNFTVTSLIVNPKWKN 121 Query: 114 PNSKYFLSINIGFPN-----EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQM 160 P + + PN + + + HG S GC M NK + Sbjct: 122 PWTGKVSAPG---PNSPLGERWIGFATKGKDVIGFHGTPGEHVMGQAVSHGCVRMRNKDI 178 Query: 161 QEIYAIVRDS 170 + ++ +V Sbjct: 179 KALFELVDKG 188 >gi|218459355|ref|ZP_03499446.1| hypothetical protein RetlK5_07637 [Rhizobium etli Kim 5] Length = 79 Score = 42.6 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 17/95 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M N+ +L S+ + P + + +IR++K+E Sbjct: 1 MRNKVVVLAIVAVGLFAYTKVMASIGSGSPPPDAPVDQRA-----------DLIRVYKSE 49 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWS-GTFGPKIE 94 + + K + + Y+I S GPK Sbjct: 50 RRMVLLKGD-----APIATYQISLGSAADAGPKQR 79 >gi|300932771|ref|ZP_07148027.1| putative lipoprotein [Corynebacterium resistens DSM 45100] Length = 382 Score = 42.6 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 27/129 (20%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 + + + I ++EI+K +K G+ P Sbjct: 217 RSAKFTIGDDVRAVIDDKTKMMEIFKNG-----KKIKTMPTSNG--------RDGEYATP 263 Query: 102 EGFYYIG---WNNLNPNSKYFLSINIG-FPNEFDKAHNRTGADLMIHGECA--------- 148 G Y +G + ++ Y L+++ G + A + + + IHG Sbjct: 264 NGVYMVGDQHEQLMMDSTTYGLALDAGGYRTSVSYATQMSYSGIYIHGAPWSEYAQGSAN 323 Query: 149 -SAGCYAMN 156 S GC ++ Sbjct: 324 TSHGCINVS 332 >gi|50085556|ref|YP_047066.1| putative signal peptide [Acinetobacter sp. ADP1] gi|49531532|emb|CAG69244.1| conserved hypothetical protein; putative signal peptide [Acinetobacter sp. ADP1] Length = 462 Score = 42.6 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 42/152 (27%), Gaps = 50/152 (32%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P +I K L ++ ++ ++ + S D +P G Y + Sbjct: 325 PEDIHLIIAHKGARQLYLF----NSRNQMIASFPATIGSS---------DTPSPTGTYKV 371 Query: 108 GWNNLNPNSKY------------FLSINIGFPNEFDKAHNRTGADLMI---------HGE 146 NP Y LS+ G PN ++ I HG Sbjct: 372 VGVARNPWYSYSPSNFVQGNNLKPLSLPPG-PNA-------PVGNIWIGLSKKSFGIHGT 423 Query: 147 CA--------SAGCYAMNNKQMQEIYAIVRDS 170 S GC + N ++ VR Sbjct: 424 PNPSAISKTASHGCIRLTNWDANDLGNKVRSG 455 >gi|301059524|ref|ZP_07200437.1| putative Protein ErfK/srfK [delta proteobacterium NaphS2] gi|300446419|gb|EFK10271.1| putative Protein ErfK/srfK [delta proteobacterium NaphS2] Length = 259 Score = 42.6 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 27/123 (21%) Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 L ++ D ++ + + G + D P G + + +NP S Sbjct: 70 ELRLYYYFNDGCPRVM-TFPV-----GIGDR----DWPTPAGRFTVREKRVNPTWFIPPS 119 Query: 122 INIGF-----PNEFDKAHNRT----GADLMIHGE--CASAG------CYAMNNKQMQEIY 164 + + P D R G D IHG S G C + + +++++ Sbjct: 120 LREKYQVRSIPPGPDNPLGRYWIGIGNDYGIHGTDLPWSVGRLVTRGCIRLYPEDIEQLF 179 Query: 165 AIV 167 V Sbjct: 180 KRV 182 >gi|325122922|gb|ADY82445.1| ATP synthase [Acinetobacter calcoaceticus PHEA-2] Length = 412 Score = 42.6 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 248 FLKKINPTATFKKAGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 297 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 298 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGKNLKPLSL 348 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 349 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 400 Query: 166 IVRDS 170 VR Sbjct: 401 KVRSG 405 >gi|293609704|ref|ZP_06692006.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828156|gb|EFF86519.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 415 Score = 42.6 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 251 FLKKINPTATFKKAGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 300 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 301 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGKNLKPLSL 351 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 352 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 403 Query: 166 IVRDS 170 VR Sbjct: 404 KVRSG 408 >gi|262375967|ref|ZP_06069198.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262309061|gb|EEY90193.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 410 Score = 42.6 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 54/149 (36%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I K L ++ +++ ++ + S D +P G Y + Sbjct: 278 LIVAHKGAKQLYLF----NSKNQMIASFPATIGSA---------DTPSPTGTYKVTGVAP 324 Query: 113 NPNSKY------------FLSINIGFPNEFDKAHNRTG--ADLMI---------HGECA- 148 NP Y LS+ G PN G ++ I HG Sbjct: 325 NPWYSYSPSNFVQGKNLKPLSLPPG-PN---------GPVGNIWIGLSKKSFGIHGTPNP 374 Query: 149 -------SAGCYAMNNKQMQEIYAIVRDS 170 S GC + N ++ V+ Sbjct: 375 SSISKTASHGCIRLTNWDANDLGRKVKSG 403 >gi|262278335|ref|ZP_06056120.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262258686|gb|EEY77419.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 416 Score = 42.6 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 53/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 252 FLKKINPTATFKKAGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 301 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 302 QMIASFPATIGST---------DTPSPAGTYKVVGVARNPWYSYSPSNFVQGKNLKPLSL 352 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ + Sbjct: 353 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGS 404 Query: 166 IVRDS 170 VR Sbjct: 405 KVRSG 409 >gi|84501009|ref|ZP_00999244.1| hypothetical protein OB2597_02702 [Oceanicola batsensis HTCC2597] gi|84391076|gb|EAQ03494.1| hypothetical protein OB2597_02702 [Oceanicola batsensis HTCC2597] Length = 320 Score = 42.6 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 49/162 (30%), Gaps = 30/162 (18%) Query: 1 MTNRYNILLFAL--FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 M R ++ L G + + + ++ P P + + Sbjct: 1 MRRRDFTIMIGAGGLSLLAGPLAGQHVYKEVNALQPGEFTWHPER---QPDGPVSVVVSL 57 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 +E + +++ + + + SG G + P G + + + + S Sbjct: 58 DEQRVHVYR---NGVRIAVSTCS----SGKPGH-------ETPTGVFVVLQKDRDHRSST 103 Query: 119 FLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAM 155 + + + PN + +H G AS GC + Sbjct: 104 YNNAPM--PNMNRLTWG----GIALHAGNLPGYPASHGCIRL 139 >gi|307304240|ref|ZP_07583992.1| hypothetical protein SinmeBDRAFT_2336 [Sinorhizobium meliloti BL225C] gi|307320545|ref|ZP_07599960.1| hypothetical protein SinmeDRAFT_4418 [Sinorhizobium meliloti AK83] gi|306893821|gb|EFN24592.1| hypothetical protein SinmeDRAFT_4418 [Sinorhizobium meliloti AK83] gi|306902708|gb|EFN33301.1| hypothetical protein SinmeBDRAFT_2336 [Sinorhizobium meliloti BL225C] Length = 60 Score = 42.6 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 13/25 (52%) Query: 144 HGECASAGCYAMNNKQMQEIYAIVR 168 H + GC A+ N +M EI +V Sbjct: 27 HMFDWTNGCIAVTNAEMDEIRDMVP 51 >gi|293611001|ref|ZP_06693300.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826653|gb|EFF85019.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 167 Score = 42.2 bits (98), Expect = 0.053, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 44/142 (30%), Gaps = 44/142 (30%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN------------LNPNSKYFLS-INI 124 K Y I G + + P G++ + P + + S + Sbjct: 27 KFYVISTGKNGIGE--QENTGRTPRGWHRVAKKIGAQSPQNAVFIARKPTGEVYSSELAA 84 Query: 125 GFPNEFDKAHNR------------TGAD-------LMIHGECA--------SAGCYAMNN 157 FP E D +R G + IHG S GC M N Sbjct: 85 QFP-ERDWILSRILWLDGLEEGFNKGDGHDTMQRYIYIHGTPDKEPMGVPMSHGCIRMRN 143 Query: 158 KQMQEIYAIV-RDSLRGNMQSH 178 +++ E++ +V D+L + Sbjct: 144 EEIIELFDLVAEDALVYLSEQS 165 >gi|297158886|gb|ADI08598.1| hypothetical protein SBI_05478 [Streptomyces bingchenggensis BCW-1] Length = 264 Score = 42.2 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 39/132 (29%) Query: 70 VDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG----------WNNLNPNSKYF 119 A++ + + + TGD ++P G + + S F Sbjct: 112 AGADWRAVATWDAHNARRGWTDHHVTGDLRSPIGVFPLTDAGGRLPDPGTRLSYEQSSGF 171 Query: 120 -------------LSIN----IGF-------PNEFDKAHN-RTGADLMI---HGECASAG 151 S + I + P ++ + + G + HG + G Sbjct: 172 TIGGTGFEGEPLAGSFDYVVAINYNRKAGTSPRDWTRPLGQKRGGGIWFHVDHGGP-TQG 230 Query: 152 CYAMNNKQMQEI 163 C +++ K M+++ Sbjct: 231 CVSISKKHMKKL 242 >gi|218288737|ref|ZP_03493000.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius LAA1] gi|218241095|gb|EED08271.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius LAA1] Length = 112 Score = 42.2 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 37/119 (31%), Gaps = 35/119 (29%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + ++ L + + +++ + + + P G Y I N Sbjct: 6 IIVDLSDRRLYLLEAG-----KVIRSFPVGIGRMVT---------RTPIGQYTIANKEPN 51 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIY 164 P + + +G ++ + HG S GC M NK + I+ Sbjct: 52 PGGPF-GAYWMG--------LSKPHYGI--HGTNDPSSIGKLVSHGCIRMYNKDV--IW 97 >gi|189220475|ref|YP_001941115.1| erfK/srfK family protein [Methylacidiphilum infernorum V4] gi|189187333|gb|ACD84518.1| Uncharacterized erfK/srfK family protein [Methylacidiphilum infernorum V4] Length = 303 Score = 42.2 bits (98), Expect = 0.055, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 42/144 (29%), Gaps = 40/144 (27%) Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 +E+ ++ + Y + G + + + P G + I + Sbjct: 1 MEL-IQDFGKSTESRRFYPVSTSKYGIGDEWNS--YKTPIGRFVIAKKIGDGIPLGGKFY 57 Query: 123 NIGF-----------PNEFD------------------KAHNRTGADLMIHGE------- 146 + F P++ D + N + IHG Sbjct: 58 HRKFTGDVIKLAAYDPSKSDFNHDSILTRILWLKGLDLQNKNSFNRGIFIHGTNQEGLVG 117 Query: 147 -CASAGCYAMNNKQMQEIYAIVRD 169 S GC M N+ + E+Y +V + Sbjct: 118 QPVSYGCIRMKNRDVLELYDLVSE 141 >gi|150396491|ref|YP_001326958.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419] gi|150028006|gb|ABR60123.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419] Length = 193 Score = 42.2 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 43/191 (22%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPF--HPTVIRIFKNE 60 R ++L +L + +GC S D+ + + +++ P P I + E Sbjct: 7 TRRVLVLGSLALLASGCG-SLRTADRPQTARTRIDPRFRRQQVAYPGGEAPGTIVVNTAE 65 Query: 61 NILEIWKRNVDAEYVLLKEYKI--------CAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 L + + + Y I G K P L Sbjct: 66 RYLY-YVQGGGSAIR----YGIGVGEEGRTLKGRAKIGRKA-EWPSWTP----TANMIRL 115 Query: 113 NPNSKYF-----LSINIGFPNEFDKA---HNRTGADLM--IHGE--CASAG------CYA 154 P+ + ++ N A R G D M +HG S G C Sbjct: 116 KPHLAQYAGGVSGGLH----NPLGAAALYLYRGGNDTMFRLHGTNEPWSIGQAVSSGCIR 171 Query: 155 MNNKQMQEIYA 165 + N+ + ++Y+ Sbjct: 172 LTNEDIVDLYS 182 >gi|87201082|ref|YP_498339.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444] gi|87136763|gb|ABD27505.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444] Length = 230 Score = 42.2 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 43/128 (33%), Gaps = 28/128 (21%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVD-AEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 P V+ + ++ +++ + +LK Y GD+ P G + Sbjct: 99 PAEGPLVVTVDLTARVISVFRAGHEIGAAAILKGY---------------GDKPTPTGIF 143 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA-----SAGCYAMNNKQM 160 I + + S + + P + T + IHG + GC + + Sbjct: 144 PITEKDADHVSNIYDA-----PMPYMMRL--TNDGVSIHGSKVEKGYATNGCIGVPDAFA 196 Query: 161 QEIYAIVR 168 +++ + + Sbjct: 197 AKLFKLAK 204 >gi|284050198|ref|ZP_06380408.1| ErfK/YbiS/YcfS/YnhG [Arthrospira platensis str. Paraca] Length = 163 Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 31/133 (23%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 VIR+ E + ++ L+ Y I + P G Y + Sbjct: 38 ELVIRL--GERRVYVYNNT-----QLVTSYPIAIGRNG---------WETPIGHYQVIQM 81 Query: 111 NLNPNSKYFLSINIGFP---NE----FDKAHNRTGADLMIHGECA--------SAGCYAM 155 +P ++ L+ +I P N + + HG S GC M Sbjct: 82 IEDPIWEHPLNGDIIPPGGDNPLGSHWIGFWTDGTNYIGFHGTPNEETVGQAVSHGCVRM 141 Query: 156 NNKQMQEIYAIVR 168 N+ + ++ V+ Sbjct: 142 FNRDVLALFNKVQ 154 >gi|190573161|ref|YP_001971006.1| hypothetical protein Smlt1135 [Stenotrophomonas maltophilia K279a] gi|190011083|emb|CAQ44692.1| putative ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas maltophilia K279a] Length = 361 Score = 42.2 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 19/133 (14%) Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84 + P + SP P V+ + +E +++ + + Sbjct: 38 SSAEVRGPTDLKPGEYLWHPEISPTGPIVLVVSLDEQRAYVYRNGIAIGLTTISS----- 92 Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE--FDKAHNRTGADLM 142 G G + P G + I + + S + S + + +D G+ Sbjct: 93 --GKAGH-------ETPTGVFTILQKDKDHRSNLYNSAPMPYMQRLTWDGIALHGGS--- 140 Query: 143 IHGECASAGCYAM 155 + G AS GC + Sbjct: 141 LPGHPASHGCVRL 153 >gi|189909412|gb|ACE60613.1| YkuD [Halobacillus aidingensis] Length = 164 Score = 42.2 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 33/121 (27%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P I + + L ++ L KE+ I P G ++I Sbjct: 55 PYRIDVSTTKRRLRLYNNGS-----LEKEFPIAVGRMLSA---------TPFGNFFIINK 100 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQE 162 NP Y ++ + + G IHG S GC M NK ++E Sbjct: 101 APNPGGPY-GTMWMS------LSKQHYG----IHGTNNPSSIGKAVSKGCIRMFNKDVEE 149 Query: 163 I 163 + Sbjct: 150 L 150 >gi|295703844|ref|YP_003596919.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319] gi|294801503|gb|ADF38569.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319] Length = 111 Score = 42.2 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 35/119 (29%) Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 ++ L+++ L+K Y I P G + I + P + + Sbjct: 10 KQHQLKLYDGA-----KLVKTYPIAVGKMIT---------PTPTGKFKIINKDTTPPAVF 55 Query: 119 -FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 L + + P G IHG S GC M+N+ + E+ ++V Sbjct: 56 GPLWMGLSKPT--------YG----IHGTNDPASIGRDMSHGCVRMDNEDILELSSVVP 102 >gi|258512366|ref|YP_003185800.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479092|gb|ACV59411.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 112 Score = 42.2 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 37/119 (31%), Gaps = 35/119 (29%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + ++ L + + +++ + + + P G Y I N Sbjct: 6 IIVDLSDRRLYLLEAG-----KVIRAFPVGIGKMVT---------RTPIGQYTIVNKEPN 51 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIY 164 P + + +G ++ + HG S GC M NK + I+ Sbjct: 52 PGGPF-GAYWMG--------LSKPHYGI--HGTNDPSSIGKLVSHGCIRMYNKDV--IW 97 >gi|158318949|ref|YP_001511457.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EAN1pec] gi|158114354|gb|ABW16551.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EAN1pec] Length = 295 Score = 42.2 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 29/151 (19%) Query: 32 PLSENLII--SMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF 89 P+ N ++ T+ P I + + + L ++ + ++ E + + Sbjct: 151 PVEPNGSSGWVKAEQVTASQTPYRIVVARGAHKLRLYSND-----KMIAEESVAIGTT-- 203 Query: 90 GPKIETGDEQAPEGFYYIGWNNLNPNS---KYFLSINIG-FPNEFDKAHNRTGADLMIHG 145 D P G +++ N + + F D R + IHG Sbjct: 204 -------DTPTPGGRFFLMELLKPSNPGGPYGPYAFGLSGFSTSLDSFGGRD-PVIGIHG 255 Query: 146 EC--------ASAGCYAMNNKQMQEIYAIVR 168 S GC ++N + + V Sbjct: 256 TNEPGSIGRDVSHGCIRLSNDAITRLAQTVP 286 >gi|56420887|ref|YP_148205.1| hypothetical protein GK2352 [Geobacillus kaustophilus HTA426] gi|56380729|dbj|BAD76637.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 168 Score = 42.2 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 34/133 (25%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 ++ + K N L + + + Y + D PEG + + Sbjct: 28 LVIVNKAINKLALVRDG-----RIEAVYPVATGVNA--------DL-TPEGMFTVTVKAK 73 Query: 113 NPNSKYFL--SINIGFPN-----EFDKAHNR-TGADLM-IHGECA--------SAGCYAM 155 P Y+ +I G PN + + R T + IHG S GC M Sbjct: 74 YP---YYRKKNIPGGAPNNPLGARWIGFNARGTDGRIYGIHGTNNPASIGQYVSQGCVRM 130 Query: 156 NNKQMQEIYAIVR 168 +N+ ++ +Y V Sbjct: 131 HNRDVEHLYERVP 143 >gi|194364758|ref|YP_002027368.1| hypothetical protein Smal_0980 [Stenotrophomonas maltophilia R551-3] gi|194347562|gb|ACF50685.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas maltophilia R551-3] Length = 361 Score = 42.2 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 19/127 (14%) Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90 P + SP P V+ + +E +++ + + G G Sbjct: 44 GPTDLKPGEYLWHPEISPTGPIVLVVSLDEQRAYVYRNGIAIGLTTISS-------GKAG 96 Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE--FDKAHNRTGADLMIHGECA 148 + P G + I + + S + S + + +D G+ + G A Sbjct: 97 H-------ETPTGVFTILQKDKDHKSNLYNSAPMPYMQRLTWDGIALHGGS---LPGHPA 146 Query: 149 SAGCYAM 155 S GC + Sbjct: 147 SHGCVRL 153 >gi|299769283|ref|YP_003731309.1| hypothetical protein AOLE_05195 [Acinetobacter sp. DR1] gi|298699371|gb|ADI89936.1| hypothetical protein AOLE_05195 [Acinetobacter sp. DR1] Length = 412 Score = 42.2 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 248 FLKKINPTATFKKAGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 297 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 298 QMIASFPATIGST---------DTPSPAGTYKVVGVARNPWYSYSPSNFVQGKNLKPLSL 348 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 349 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 400 Query: 166 IVRDS 170 VR Sbjct: 401 KVRSG 405 >gi|312897678|ref|ZP_07757095.1| ErfK/YbiS/YcfS/YnhG [Megasphaera micronuciformis F0359] gi|310621311|gb|EFQ04854.1| ErfK/YbiS/YcfS/YnhG [Megasphaera micronuciformis F0359] Length = 355 Score = 42.2 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 40/131 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + IL +++ Y + + P G+Y + +N Sbjct: 75 ILVNTASRILTLYRGK-----EKAAMYPVGVGKAST---------PTPSGYYRVETKEVN 120 Query: 114 PN-----------SKYFLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYA 154 P + + +G+ + +G IHG + S GC Sbjct: 121 PEWIDPEDTENRIASGPGN-PLGY-----RWIGFSGTY-GIHGTNSPESVGGYVSNGCVR 173 Query: 155 MNNKQMQEIYA 165 M + ++++Y+ Sbjct: 174 MREQDVEDLYS 184 >gi|296133960|ref|YP_003641207.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR] gi|296032538|gb|ADG83306.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR] Length = 291 Score = 41.8 bits (97), Expect = 0.069, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 42/132 (31%), Gaps = 36/132 (27%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I K N L + + K + + D PEG + + +N Sbjct: 39 IIINKKVNKLAYLENG-----QVSKIFPVATGRTP--------DL-TPEGSFRVVRKVVN 84 Query: 114 PNSKYF--LSINIGFP-NEF------DKAHNRTGADLMIHGECA--------SAGCYAMN 156 P Y+ L I G P N A +G IHG S GC M Sbjct: 85 P---YYNKLKIPGGSPRNPLGARWLGIDARGTSGGTYGIHGTNNPKSIGKYASGGCIRMF 141 Query: 157 NKQMQEIYAIVR 168 N+ + I+ R Sbjct: 142 NQDV--IWLYER 151 >gi|301511179|ref|ZP_07236416.1| hypothetical protein AbauAB05_06353 [Acinetobacter baumannii AB058] Length = 415 Score = 41.8 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 52/186 (27%), Gaps = 56/186 (30%) Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 250 TFLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSR 299 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLS 121 ++ + S D +P G Y + NP Y LS Sbjct: 300 NQMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLS 350 Query: 122 INIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIY 164 + G PN ++ I HG S GC + N ++ Sbjct: 351 LPPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLG 402 Query: 165 AIVRDS 170 VR Sbjct: 403 NKVRSG 408 >gi|282882201|ref|ZP_06290840.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus lacrimalis 315-B] gi|281297966|gb|EFA90423.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus lacrimalis 315-B] Length = 269 Score = 41.8 bits (97), Expect = 0.071, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 37/136 (27%), Gaps = 35/136 (25%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAW---------SGTFG--PKIET 95 P I + K+ IL ++ + L +Y + G G K Sbjct: 83 PPSKGYWIAVNKSRRILTMYMGDKS-----LGKYPVTLGTSATQTPSGRGKIGNMHKNPA 137 Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 G Y + N + + +G + HG Sbjct: 138 WGGM--NGKYKPVAADDPKNPLGERWMGLS-------LKGFSGYGI--HGNIKPHQIGGY 186 Query: 149 -SAGCYAMNNKQMQEI 163 S GC M N ++E+ Sbjct: 187 YSNGCIRMFNYDIEEV 202 >gi|291569009|dbj|BAI91281.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 153 Score = 41.8 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 31/133 (23%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 VIR+ E + ++ L+ Y I + P G Y + Sbjct: 28 ELVIRL--GERRVYVYNNT-----QLVTSYPIAIGRNG---------WETPIGHYQVIQM 71 Query: 111 NLNPNSKYFLSINIGFP---NE----FDKAHNRTGADLMIHGECA--------SAGCYAM 155 +P ++ L+ +I P N + + HG S GC M Sbjct: 72 IEDPIWEHPLNGDIIPPGGDNPLGSHWIGFWTDGTNYIGFHGTPNEETVGQAVSHGCVRM 131 Query: 156 NNKQMQEIYAIVR 168 N+ + ++ V+ Sbjct: 132 FNRDVLALFNKVQ 144 >gi|92117634|ref|YP_577363.1| hypothetical protein Nham_2106 [Nitrobacter hamburgensis X14] gi|91800528|gb|ABE62903.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14] Length = 503 Score = 41.8 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 25/126 (19%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P P +I I L+++ N L E + G G P G + + Sbjct: 104 PQGPIIIAISIRRQTLKVYDANG-----LFAETPVST--GMRGH-------STPMGVFSV 149 Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQE 162 S + + + T + + +H G AS GC M + Sbjct: 150 IQKQKWHRSNIYSGAPMPY------MQRITWSGIAMHAGVLPGYPASHGCIRMPMSFAVK 203 Query: 163 IYAIVR 168 ++ R Sbjct: 204 MWRWTR 209 >gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesorhizobium loti MAFF303099] gi|14023713|dbj|BAB50318.1| mll3427 [Mesorhizobium loti MAFF303099] Length = 505 Score = 41.8 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 44/160 (27%) Query: 35 ENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 II + P I K + E++ + L+ Y S Sbjct: 343 PGTIIKVANFGKLVSTPVARIVADKTKK--EVYAYDASG--KLVAAYPATIGSA------ 392 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF--------------PN----EFDKAHN 135 D +P G + + L+PN Y + NI F PN A + Sbjct: 393 ---DTPSPTGIHAVSRIALDPNYTY--NPNINFKQGQNDKILTIPPGPNGPVGSVWIALD 447 Query: 136 RTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 + + HG S GC + N +E+ +V Sbjct: 448 KPTYGI--HGTPEPSKIGKTESHGCVRLTNWDARELAKLV 485 >gi|323518861|gb|ADX93242.1| hypothetical protein ABTW07_2818 [Acinetobacter baumannii TCDC-AB0715] Length = 415 Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 251 FLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 300 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 301 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSL 351 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 352 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 403 Query: 166 IVRDS 170 VR Sbjct: 404 KVRSG 408 >gi|260556712|ref|ZP_05828930.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii ATCC 19606] gi|260409971|gb|EEX03271.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii ATCC 19606] Length = 418 Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 254 FLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 303 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 304 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSL 354 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 355 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 406 Query: 166 IVRDS 170 VR Sbjct: 407 KVRSG 411 >gi|184158889|ref|YP_001847228.1| hypothetical protein ACICU_02569 [Acinetobacter baumannii ACICU] gi|213158089|ref|YP_002320140.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii AB0057] gi|215482781|ref|YP_002324982.1| hypothetical protein ABBFA_001071 [Acinetobacter baumannii AB307-0294] gi|239502499|ref|ZP_04661809.1| hypothetical protein AbauAB_09314 [Acinetobacter baumannii AB900] gi|301347442|ref|ZP_07228183.1| hypothetical protein AbauAB0_14373 [Acinetobacter baumannii AB056] gi|301596121|ref|ZP_07241129.1| hypothetical protein AbauAB059_09914 [Acinetobacter baumannii AB059] gi|332854140|ref|ZP_08435198.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150] gi|332867906|ref|ZP_08437908.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113] gi|332875748|ref|ZP_08443548.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059] gi|183210483|gb|ACC57881.1| uncharacterized protein conserved in bacteria [Acinetobacter baumannii ACICU] gi|193077900|gb|ABO12790.2| hypothetical protein A1S_2371 [Acinetobacter baumannii ATCC 17978] gi|213057249|gb|ACJ42151.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii AB0057] gi|213988538|gb|ACJ58837.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|322508867|gb|ADX04321.1| putative exported protein [Acinetobacter baumannii 1656-2] gi|332728196|gb|EGJ59582.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150] gi|332733679|gb|EGJ64837.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113] gi|332736072|gb|EGJ67099.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059] Length = 415 Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 251 FLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 300 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 301 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSL 351 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 352 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 403 Query: 166 IVRDS 170 VR Sbjct: 404 KVRSG 408 >gi|169795243|ref|YP_001713036.1| hypothetical protein ABAYE1105 [Acinetobacter baumannii AYE] gi|169148170|emb|CAM86033.1| conserved hypothetical protein; putative exported protein [Acinetobacter baumannii AYE] Length = 418 Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 254 FLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 303 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 304 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSL 354 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 355 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 406 Query: 166 IVRDS 170 VR Sbjct: 407 KVRSG 411 >gi|126642408|ref|YP_001085392.1| hypothetical protein A1S_2371 [Acinetobacter baumannii ATCC 17978] Length = 396 Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 232 FLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 281 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 282 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSL 332 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 333 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 384 Query: 166 IVRDS 170 VR Sbjct: 385 KVRSG 389 >gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 415 Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 251 FLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 300 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 301 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSL 351 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 352 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 403 Query: 166 IVRDS 170 VR Sbjct: 404 KVRSG 408 >gi|75675776|ref|YP_318197.1| hypothetical protein Nwi_1584 [Nitrobacter winogradskyi Nb-255] gi|74420646|gb|ABA04845.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 493 Score = 41.8 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 40/141 (28%), Gaps = 31/141 (21%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 S + P +I P P +I + ++++ N L E Sbjct: 82 QAHESKPRRLSKPEPTARVIRK------PNGPIIIAVSIRRQTMKVYDGNG-----LFAE 130 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139 + G G P G + + S + + + + T + Sbjct: 131 TPVST--GMRGH-------STPMGVFSVIQKRKWHRSNIYSNAPMPY------MQRITWS 175 Query: 140 DLMIH-----GECASAGCYAM 155 + +H G AS GC M Sbjct: 176 GIAMHAGALPGYPASHGCIRM 196 >gi|227833888|ref|YP_002835595.1| putative lipoprotein [Corynebacterium aurimucosum ATCC 700975] gi|262184894|ref|ZP_06044315.1| putative lipoprotein [Corynebacterium aurimucosum ATCC 700975] gi|227454904|gb|ACP33657.1| putative lipoprotein [Corynebacterium aurimucosum ATCC 700975] Length = 407 Score = 41.8 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 31/133 (23%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 + + I N ++ ++K +L+ + G P Sbjct: 240 ASTNFTIGDRVITLIDNNTKMMSVFKNG-----EVLRRIPVSMG--------RDGQWDTP 286 Query: 102 EGFYYIG---WNNLNPNSKYFLSINIG-FPNEFDKAHN--RTGADLMIHGECA------- 148 G Y IG + + ++ + L+++ G + D + + + +H Sbjct: 287 NGTYIIGDQYPSLVMDSTTFGLALDAGGY--RTDVQWATQMSYSGIYVHAAPWAVGAMGS 344 Query: 149 ---SAGCYAMNNK 158 S GC + + Sbjct: 345 YNQSHGCINVTTE 357 >gi|291441478|ref|ZP_06580868.1| lipoprotein [Streptomyces ghanaensis ATCC 14672] gi|291344373|gb|EFE71329.1| lipoprotein [Streptomyces ghanaensis ATCC 14672] Length = 247 Score = 41.8 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 38/144 (26%) Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-GWNNLNPN 115 N + +++R + + + GD ++P G + + L P+ Sbjct: 83 DTNRSEAVLYRRTASG-WEAGPAWPARNALKGWTDDHYAGDLRSPVGVFTLSDAGGLLPD 141 Query: 116 --------------------------SKYFLSINIGF---P--NEFDKAH---NRTGADL 141 + I I + P + D+ G + Sbjct: 142 PGTALPYDQSDSFTVDGTGFEGEPLAGSFDYVIAIDYNREPGTSPLDRTRPLGADKGGGI 201 Query: 142 MIHGECA--SAGCYAMNNKQMQEI 163 +H + + GC ++ + M+E+ Sbjct: 202 WLHVDHQGPTQGCVSLEKRHMEEL 225 >gi|239933128|ref|ZP_04690081.1| hypothetical protein SghaA1_33203 [Streptomyces ghanaensis ATCC 14672] Length = 276 Score = 41.8 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 38/144 (26%) Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI-GWNNLNPN 115 N + +++R + + + GD ++P G + + L P+ Sbjct: 112 DTNRSEAVLYRRTASG-WEAGPAWPARNALKGWTDDHYAGDLRSPVGVFTLSDAGGLLPD 170 Query: 116 --------------------------SKYFLSINIGF---P--NEFDKAH---NRTGADL 141 + I I + P + D+ G + Sbjct: 171 PGTALPYDQSDSFTVDGTGFEGEPLAGSFDYVIAIDYNREPGTSPLDRTRPLGADKGGGI 230 Query: 142 MIHGECA--SAGCYAMNNKQMQEI 163 +H + + GC ++ + M+E+ Sbjct: 231 WLHVDHQGPTQGCVSLEKRHMEEL 254 >gi|255318424|ref|ZP_05359657.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82] gi|262378654|ref|ZP_06071811.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] gi|255304416|gb|EET83600.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82] gi|262299939|gb|EEY87851.1| conserved hypothetical protein [Acinetobacter radioresistens SH164] Length = 418 Score = 41.8 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 43/154 (27%), Gaps = 54/154 (35%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P +I K L ++ ++ ++ + S D +P G Y + Sbjct: 281 PEDIHLIVAHKGAKQLYLF----NSRNQMIASFPATIGST---------DTPSPAGTYKV 327 Query: 108 GWNNLNPNSKY------------FLSINIGFPNEFDKAHNRTG--ADLMI---------H 144 NP Y LS+ G PN G ++ I H Sbjct: 328 TGVAPNPWYSYSPSNFVQGNNKKPLSLPPG-PN---------GPVGNIWIGLSKKSFGIH 377 Query: 145 GECA--------SAGCYAMNNKQMQEIYAIVRDS 170 G S GC + N ++ VR Sbjct: 378 GTPNPSLISKTASHGCIRLTNWDANDLGKKVRSG 411 >gi|220910238|ref|YP_002485549.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425] gi|219866849|gb|ACL47188.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425] Length = 217 Score = 41.8 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 34/137 (24%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 P + I + + +++ + LK Y + + P G + + Sbjct: 88 APLRLVISLSRRRVTVFQGSTA-----LKSYPVAIGRPG---------WETPVGKFQVKQ 133 Query: 110 NNLNPNSKYFLSINI---GFP-NEFDKAH------NRTGADLMIHGECA--------SAG 151 NP K+ +I G P N K + + +HG S G Sbjct: 134 LIRNPTWKHPFKGDIIKGGHPDNPLGKFWIGFWTDGKN--WVGMHGTPNPESVGRAASHG 191 Query: 152 CYAMNNKQMQEIYAIVR 168 C M NK + E++A V+ Sbjct: 192 CVRMYNKDIAELFAKVQ 208 >gi|260425195|ref|ZP_05734487.2| ErfK/YbiS/YcfS/YnhG family protein [Dialister invisus DSM 15470] gi|260404459|gb|EEW98006.1| ErfK/YbiS/YcfS/YnhG family protein [Dialister invisus DSM 15470] Length = 351 Score = 41.8 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 52/185 (28%), Gaps = 41/185 (22%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 + L + L G + S + + K++ + + +L Sbjct: 11 KKITALCCIVFLLAGVGGYTADAAINTEVGSLSGMPLPAPKKSETGKKITLNL--ASRLL 68 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-------- 115 +++ ++ Y + P +P G + I +NP Sbjct: 69 TLYEGT-----EKVRIYPVAVG-APETP--------SPVGEFSISEKEVNPVWTDPKTKT 114 Query: 116 --SKYFLSINIGFPNEFDKAHNRTGADLMIHGE--CASA------GCYAMNNKQMQEIYA 165 S +G+ + G IHG S GC M + ++E++ Sbjct: 115 TVPSGP-SNPLGY-----RWLGLYGNY-GIHGTNAPWSIGRSVSHGCIRMYEEDVEELFE 167 Query: 166 IVRDS 170 V Sbjct: 168 SVPMG 172 >gi|134300529|ref|YP_001114025.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1] gi|134053229|gb|ABO51200.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1] Length = 315 Score = 41.8 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 41/144 (28%), Gaps = 33/144 (22%) Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95 ++ +K P I I L + ++ + P Sbjct: 113 EKPVTKSEKTLPPTGDMAIIIDTTTRKLTVLSDG-----KPYTQFNVACGK-PSTP---- 162 Query: 96 GDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA------ 148 +P G + + N + + + + P + G IHG Sbjct: 163 ----SPVGSWQVVHKATNWGTGFGTRWLGLNVP------WGKYG----IHGTNKPFSIGS 208 Query: 149 --SAGCYAMNNKQMQEIYAIVRDS 170 S GC M+N ++++Y + Sbjct: 209 YASHGCIRMHNSSVEKLYPWIPKG 232 >gi|251797492|ref|YP_003012223.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2] gi|247545118|gb|ACT02137.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2] Length = 112 Score = 41.8 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 35/126 (27%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I + ++ +L + N V++ Y + Q P G Y I Sbjct: 4 YRIIVDLSDRMLHLLDGN-----VVVNSYPVGIGKMVT---------QTPSGEYKIINKQ 49 Query: 112 LNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + L + + P G IHG S GC M N+ + Sbjct: 50 ENPGGPFGVLWMGLSKP--------HYG----IHGTNDPSSIGRMVSHGCIRMYNEDVLA 97 Query: 163 IYAIVR 168 + +V Sbjct: 98 LSDLVP 103 >gi|303239802|ref|ZP_07326326.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2] gi|302592739|gb|EFL62463.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2] Length = 123 Score = 41.8 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 33/123 (26%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I + L ++K D ++ + + P P+G Y I +N Sbjct: 16 IVINTSARNLTLYK---DEKW--FMSFPVAVGK-PSTP--------TPKGTYRIINKAVN 61 Query: 114 PNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIY 164 P + + + P +G IHG S GC M+N + +Y Sbjct: 62 PGGPFGARWLGLSIP---------SGGY-GIHGTNDPSSIGKAVSHGCVRMHNNDVITLY 111 Query: 165 AIV 167 IV Sbjct: 112 NIV 114 >gi|134299121|ref|YP_001112617.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1] gi|134051821|gb|ABO49792.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1] Length = 294 Score = 41.8 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 41/128 (32%), Gaps = 27/128 (21%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I I K N L ++ + L K + + PEG + + L Sbjct: 18 MIIINKKTNQLGFYEDGL-----LSKVFPVATGRQRS---------FTPEGNFRVINKQL 63 Query: 113 NPNSKYFLSINIGFP-NEFDKAH---NRTGADLMIHGECA--------SAGCYAMNNKQM 160 NP Y +I G P N + G IHG S GC + N + Sbjct: 64 NP-PYYKKNIPGGSPYNPLGPRWLGLSAPGGPYGIHGNSNPASIGTYASNGCIRLFNNDI 122 Query: 161 QEIYAIVR 168 +Y V Sbjct: 123 LWLYEQVP 130 >gi|307323269|ref|ZP_07602479.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces violaceusniger Tu 4113] gi|306890758|gb|EFN21734.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces violaceusniger Tu 4113] Length = 246 Score = 41.8 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 61/219 (27%), Gaps = 61/219 (27%) Query: 1 MTNRYNILLFALFIFLNGCHHS--------------RSLIDKAEHPLSENL--IISMQKK 44 M+ R A + L C ++L A P + + + Sbjct: 7 MSMRAAAAAAAALVLLTACGDGGGDSGGDKGGSSGKQALRSGAPAPDPTRIPDVGDTLQS 66 Query: 45 RTSPFHPTVIRIFKN-----ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ 99 R V+ ++ + + ++ + + + G + GD++ Sbjct: 67 RIPDQSRQVVAVYGKGVNSADATVVLYTK-QGKAWERTHSWTAHNGKGGWTTSHHEGDKR 125 Query: 100 APEGFYYIG----------------------WNNLNPNS---KYFLSINIGFPN------ 128 +P G Y + + P S + I I + N Sbjct: 126 SPVGVYTLSDAGGVLPDPGARLPYTASGSFAAPHYWPKSHWTDFNYVIAIDY-NRVKGAS 184 Query: 129 EFDKAH---NRTGADLMI---HGECASAGCYAMNNKQMQ 161 D+ G + + HG SA C +++ M+ Sbjct: 185 PLDQTRPEGQSKGGSIWLHMDHGSGTSA-CVSLSKSGME 222 >gi|111221344|ref|YP_712138.1| hypothetical protein FRAAL1904 [Frankia alni ACN14a] gi|111148876|emb|CAJ60554.1| hypothetical protein; putative Peptidoglycan-binding domain ErfK/YbiS/YcfS/YnhG [Frankia alni ACN14a] Length = 329 Score = 41.8 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 29/126 (23%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 P +++ ++ + L + + ++ + +G P G +Y+ Sbjct: 206 PYDLQVDRSAHRLTVLREG-----AVIARLPVGIGAGGT---------PTPSGRFYLTEL 251 Query: 111 NLNPNSKYF---LSINIGFPNEFDKAHNRTGAD--LMIHGEC--------ASAGCYAMNN 157 + + + D GAD + +HG AS GC + N Sbjct: 252 LRPADPNGPWGPYAFGLS--GFSDVITRFNGADGIIGLHGTNRPDLVGTDASHGCIRLRN 309 Query: 158 KQMQEI 163 ++++ Sbjct: 310 ADIEKL 315 >gi|323484487|ref|ZP_08089853.1| S-layer and secreted protein [Clostridium symbiosum WAL-14163] gi|323692548|ref|ZP_08106781.1| hypothetical protein HMPREF9475_01644 [Clostridium symbiosum WAL-14673] gi|323402265|gb|EGA94597.1| S-layer and secreted protein [Clostridium symbiosum WAL-14163] gi|323503414|gb|EGB19243.1| hypothetical protein HMPREF9475_01644 [Clostridium symbiosum WAL-14673] Length = 268 Score = 41.8 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 17/156 (10%), Positives = 39/156 (25%), Gaps = 57/156 (36%) Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN--------- 110 + L + RN + + + + GD++ P G Y Sbjct: 92 QGTLTWYVRNQEGKLIPAFSVPAVSGMNGISADKREGDKKTPSGIYSFTMAFGMKDNPGS 151 Query: 111 -------------------------------NLNPNS---------KYFLSINIGFPNEF 130 + NS Y ++ + + Sbjct: 152 ILPYHKVVNGDHFVDDSGSRYYNRLVNESQVQKDWNSSENLIRQAPHYNYALVLNY---N 208 Query: 131 DKAHNRTGADLMIH-----GECASAGCYAMNNKQMQ 161 D G+ + +H ++GC ++ + M+ Sbjct: 209 DTYVPGKGSAIFLHCPKTANNTGTSGCISIPEEYMK 244 >gi|332828623|gb|EGK01323.1| hypothetical protein HMPREF9455_02515 [Dysgonomonas gadei ATCC BAA-286] Length = 352 Score = 41.8 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 35/122 (28%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHP------LSENLIISMQKKRTSPFH---- 50 M + +L ++ F C ID + P ++ +S K T + Sbjct: 1 MKKTFFLLFASVAFF--ACSSDEQTIDNGQDPEGLVFEIAAKTQLSTTKAGTPVYSQDAS 58 Query: 51 ----PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG---------TFGPKIETGD 97 + FK+ ++ +K Y I W+ G K++ GD Sbjct: 59 QSVTRVSVHAFKSNGTDYLY----------VKTYDISDWTAGSTFKRYAVPIGDKLDAGD 108 Query: 98 EQ 99 + Sbjct: 109 YK 110 >gi|222055460|ref|YP_002537822.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] gi|221564749|gb|ACM20721.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] Length = 286 Score = 41.8 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 49/167 (29%), Gaps = 33/167 (19%) Query: 31 HPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFG 90 P+ L K P I I E L ++ + L+ I + Sbjct: 104 APVPAELAYEASDKD-----PKFILIDLTEQFLGVYDKG-----RLVFSSPIASGKS--- 150 Query: 91 PKIETGDEQAPEGFYYIGWNNLNPNSKYF------LSINIGFPNEFDKAHNRTGADLMIH 144 D P G + I + S + + + + F N G + IH Sbjct: 151 ------DFITPPGEFRIDAYSGRHESSLYTIEDKDIPYPMHYGLRF--LVNEEGVEYWIH 202 Query: 145 GE-----CASAGCYAMNNKQMQ-EIYAIVRDSLRGNMQSHIQIQAFP 185 G AS GC + ++ MQ E Y L + + P Sbjct: 203 GRDMPGYPASHGCVGLYDEDMQKEYYGFPDYPLMDTARKLFEWAISP 249 >gi|254521509|ref|ZP_05133564.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas sp. SKA14] gi|219719100|gb|EED37625.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas sp. SKA14] Length = 352 Score = 41.4 bits (96), Expect = 0.091, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 19/113 (16%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 SP P V+ + +E +++ + + G G + P G Sbjct: 49 EISPTGPIVLVVSLDEQRAYVYRNGIAIGLTTISS-------GKAGH-------ETPTGV 94 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNE--FDKAHNRTGADLMIHGECASAGCYAM 155 + I + + S + S + + +D G+ + G AS GC + Sbjct: 95 FTILQKDKDHRSNLYNSAPMPYMQRLTWDGIALHGGS---LPGHPASHGCVRL 144 >gi|325123319|gb|ADY82842.1| hypothetical protein BDGL_002256 [Acinetobacter calcoaceticus PHEA-2] Length = 167 Score = 41.4 bits (96), Expect = 0.092, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 44/142 (30%), Gaps = 44/142 (30%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN------------LNPNSKYFLS-INI 124 K Y I G + + P G++ + P + + S + Sbjct: 27 KFYVISTGKNGIGE--QENTGRTPRGWHRVAKKIGAQAPQNAVFIARKPTEEVYSSELAA 84 Query: 125 GFPNEFDKAHNR------------TGAD-------LMIHGECA--------SAGCYAMNN 157 FP E D +R G + IHG S GC M N Sbjct: 85 QFP-ERDWILSRILWLDGLEEGFNKGDGHDTMQRYIYIHGTPDKEPMGVPMSHGCIRMRN 143 Query: 158 KQMQEIYAIV-RDSLRGNMQSH 178 +++ E++ +V D+L + Sbjct: 144 EEIIELFDLVAEDALVYLSEQS 165 >gi|169794854|ref|YP_001712647.1| hypothetical protein ABAYE0680 [Acinetobacter baumannii AYE] gi|213157819|ref|YP_002320617.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii AB0057] gi|215482401|ref|YP_002324583.1| hypothetical protein ABBFA_000659 [Acinetobacter baumannii AB307-0294] gi|301348125|ref|ZP_07228866.1| hypothetical protein AbauAB0_17806 [Acinetobacter baumannii AB056] gi|301513350|ref|ZP_07238587.1| hypothetical protein AbauAB05_17256 [Acinetobacter baumannii AB058] gi|301596943|ref|ZP_07241951.1| hypothetical protein AbauAB059_14032 [Acinetobacter baumannii AB059] gi|332852308|ref|ZP_08434113.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150] gi|332870531|ref|ZP_08439295.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113] gi|169147781|emb|CAM85644.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|213056979|gb|ACJ41881.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii AB0057] gi|213986475|gb|ACJ56774.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|332729438|gb|EGJ60778.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150] gi|332732268|gb|EGJ63536.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113] Length = 167 Score = 41.4 bits (96), Expect = 0.093, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 9/48 (18%) Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSLRGNMQSH 178 + IHG S GC M N+++ E++ +V D+L + Sbjct: 118 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDALVYLSEQS 165 >gi|256375196|ref|YP_003098856.1| ErfK/YbiS/YcfS/YnhG family protein [Actinosynnema mirum DSM 43827] gi|255919499|gb|ACU35010.1| ErfK/YbiS/YcfS/YnhG family protein [Actinosynnema mirum DSM 43827] Length = 400 Score = 41.4 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Query: 100 APEGFYYIGWNNLN---PNSKYFLSINIG-FPNEFDKAHNRTGADLMIHGECASAG 151 P G Y + + + + Y L+++ G + D A + + + H S G Sbjct: 281 TPVGTYVLTEKHDHMVMDSRTYGLALDAGGYVTPVDWATRMSNSGIFFHSAPWSIG 336 >gi|169632527|ref|YP_001706263.1| hypothetical protein ABSDF0653 [Acinetobacter baumannii SDF] gi|184159373|ref|YP_001847712.1| hypothetical protein ACICU_03053 [Acinetobacter baumannii ACICU] gi|239501781|ref|ZP_04661091.1| hypothetical protein AbauAB_05656 [Acinetobacter baumannii AB900] gi|260557219|ref|ZP_05829435.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii ATCC 19606] gi|332876213|ref|ZP_08443988.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059] gi|169151319|emb|CAP00030.1| conserved hypothetical protein [Acinetobacter baumannii] gi|183210967|gb|ACC58365.1| hypothetical protein ACICU_03053 [Acinetobacter baumannii ACICU] gi|193078252|gb|ABO13212.2| hypothetical protein A1S_2806 [Acinetobacter baumannii ATCC 17978] gi|260409325|gb|EEX02627.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii ATCC 19606] gi|322509285|gb|ADX04739.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2] gi|323519313|gb|ADX93694.1| hypothetical protein ABTW07_3274 [Acinetobacter baumannii TCDC-AB0715] gi|332735485|gb|EGJ66537.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059] Length = 167 Score = 41.4 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 9/48 (18%) Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSLRGNMQSH 178 + IHG S GC M N+++ E++ +V D+L + Sbjct: 118 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDALVYLSEQS 165 >gi|148359132|ref|YP_001250339.1| hypothetical protein LPC_1022 [Legionella pneumophila str. Corby] gi|296107181|ref|YP_003618881.1| hypothetical protein lpa_02313 [Legionella pneumophila 2300/99 Alcoy] gi|148280905|gb|ABQ54993.1| hypothetical protein LPC_1022 [Legionella pneumophila str. Corby] gi|295649082|gb|ADG24929.1| Hypothetical protein lpa_02313 [Legionella pneumophila 2300/99 Alcoy] Length = 244 Score = 41.4 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 38/164 (23%) Query: 29 AEHPLSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 A +PL+ N + + + P P I I E L + + + ++ Y + Sbjct: 73 ARYPLAANTKLIIPSRFILPNVPRKGIVINLAEYRLYYFPPDDN----VVMTYPV----- 123 Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPN-----------SKYFLSINIGFP----NEFDK 132 G K P G I +NP I FP N + Sbjct: 124 GIGKKGWE----TPLGLSRITSKEINPTWRPTVKLQKAAESIGAPIPSEFPPGPYNPLGQ 179 Query: 133 AHNRTGAD-LMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 R G ++IHG SAGC M + ++ +Y++V Sbjct: 180 HVLRLGWPAILIHGSNRVDGIGAKVSAGCIRMLPEDIEHLYSLV 223 >gi|308174184|ref|YP_003920889.1| hypothetical protein BAMF_2293 [Bacillus amyloliquefaciens DSM 7] gi|307607048|emb|CBI43419.1| conserved hypothetical protein [Bacillus amyloliquefaciens DSM 7] gi|328554128|gb|AEB24620.1| hypothetical protein BAMTA208_12285 [Bacillus amyloliquefaciens TA208] gi|328912519|gb|AEB64115.1| hypothetical protein LL3_02582 [Bacillus amyloliquefaciens LL3] Length = 176 Score = 41.4 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 37/143 (25%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P P I + K N L + K N + Y++ D+ PEG + + Sbjct: 24 PGDP-YIIVNKATNALAVVKDN-----RIEGIYQVATGKT---------DDLTPEGEFTV 68 Query: 108 GWNNLNPNSKYFLSINI--GFP-NE-------FDKAHNRTGADLMIHGEC--------AS 149 +NP Y+ N+ G P N FD A G IHG S Sbjct: 69 TVKAVNP---YYRKKNVEGGAPENPLGVRWIGFD-ARGTDGRIYGIHGTNREELIGGFVS 124 Query: 150 AGCYAMNNKQMQEIYAIVRDSLR 172 GC M N+ + I+ I+ + + Sbjct: 125 NGCIRMKNRDVIHIFRIIPEGTK 147 >gi|225181547|ref|ZP_03734989.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiobacter alkaliphilus AHT 1] gi|225167795|gb|EEG76604.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiobacter alkaliphilus AHT 1] Length = 172 Score = 41.4 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 25/110 (22%) Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-- 118 L + + K Y I D P G + + N P+ Sbjct: 11 KKLTFYHQG-----QYYKTYPIAIGKP---------DTPTPLGEFSVYEKNPRPHQMLGT 56 Query: 119 -FLSINIGFPNEFDKAHNRTG-ADLMIHGECASAGCYAMNNKQMQEIYAI 166 +++ + + H G + G A+AGC M N+ ++E++ + Sbjct: 57 RWMAFT--Y-----QRHGIHGTFNPWTIGTAATAGCVRMYNEDVEELFPL 99 >gi|291484832|dbj|BAI85907.1| hypothetical protein BSNT_03562 [Bacillus subtilis subsp. natto BEST195] Length = 176 Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 46/136 (33%), Gaps = 37/136 (27%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P P VI + K N L + N + Y + D+ PEG + + Sbjct: 24 PGDPYVI-VNKRTNELAVILDN-----RVEGVYSVATGKT---------DDLTPEGEFSV 68 Query: 108 GWNNLNPNSKYFLSINI--GFP-NE-------FDKAHNRTGADLMIHGEC--------AS 149 NP Y+ NI G P N FD A G IHG S Sbjct: 69 TVKAENP---YYRKKNIEGGSPDNPLGARWIGFD-AKGTDGRIYGIHGTNREESVGKFVS 124 Query: 150 AGCYAMNNKQMQEIYA 165 GC M+N ++ ++ Sbjct: 125 NGCIRMHNDEVVHLFQ 140 >gi|260548891|ref|ZP_05823113.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624] gi|260408059|gb|EEX01530.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624] Length = 167 Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 9/48 (18%) Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSLRGNMQSH 178 + IHG S GC M N+++ E++ +V D+L + Sbjct: 118 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDALVYLSEQS 165 >gi|307317204|ref|ZP_07596645.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83] gi|306897292|gb|EFN28037.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83] Length = 193 Score = 41.4 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 49/184 (26%), Gaps = 29/184 (15%) Query: 3 NRYNILLFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 R ++L +L +F +GC S A + + P I + E Sbjct: 7 TRRVLVLGSLALFASGCSSLRSADSPQSARTRIDPR-YRRQEVAYYGGEAPGTIVVNTGE 65 Query: 61 NILEIWKRNVDAEYVLLKEYKI--------CAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 L + + + Y I G K P I Sbjct: 66 RYLY-YVQGGGSAIR----YGIGVGEEGRTLKGRAKIGRKA-EWPSWTPTAN-MIRRKPH 118 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGAD---LMIHGE--CASAG------CYAMNNKQMQ 161 +S + P + G + +HG + G C + N + Sbjct: 119 LAQYAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGTNEPWTIGQAVSSGCIRLTNDDIV 178 Query: 162 EIYA 165 ++Y+ Sbjct: 179 DLYS 182 >gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Bacillus subtilis subsp. subtilis str. 168] gi|221310314|ref|ZP_03592161.1| hypothetical protein Bsubs1_13136 [Bacillus subtilis subsp. subtilis str. 168] gi|221314638|ref|ZP_03596443.1| hypothetical protein BsubsN3_13057 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319561|ref|ZP_03600855.1| hypothetical protein BsubsJ_12978 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323837|ref|ZP_03605131.1| hypothetical protein BsubsS_13107 [Bacillus subtilis subsp. subtilis str. SMY] gi|321311875|ref|YP_004204162.1| hypothetical protein BSn5_02505 [Bacillus subtilis BSn5] gi|1731066|sp|P54539|YQJB_BACSU RecName: Full=Putative L,D-transpeptidase YqjB; Flags: Precursor gi|1303953|dbj|BAA12608.1| YqjB [Bacillus subtilis] gi|2634828|emb|CAB14325.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis str. 168] gi|320018149|gb|ADV93135.1| hypothetical protein BSn5_02505 [Bacillus subtilis BSn5] Length = 176 Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 46/136 (33%), Gaps = 37/136 (27%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P P VI + K N L + N + Y + D+ PEG + + Sbjct: 24 PGDPYVI-VNKRTNELAVILDN-----KVEGVYSVATGKT---------DDLTPEGEFSV 68 Query: 108 GWNNLNPNSKYFLSINI--GFP-NE-------FDKAHNRTGADLMIHGEC--------AS 149 NP Y+ NI G P N FD A G IHG S Sbjct: 69 TVKAENP---YYRKKNIEGGSPDNPLGARWIGFD-AKGTDGRIYGIHGTNREESVGKFVS 124 Query: 150 AGCYAMNNKQMQEIYA 165 GC M+N ++ ++ Sbjct: 125 NGCIRMHNDEVVHLFQ 140 >gi|126642830|ref|YP_001085814.1| hypothetical protein A1S_2806 [Acinetobacter baumannii ATCC 17978] Length = 138 Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 9/48 (18%) Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSLRGNMQSH 178 + IHG S GC M N+++ E++ +V D+L + Sbjct: 89 YIYIHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDALVYLSEQS 136 >gi|220908597|ref|YP_002483908.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425] gi|219865208|gb|ACL45547.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425] Length = 204 Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 48/166 (28%), Gaps = 30/166 (18%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 ++ S P + L + P + + + + +++ + Sbjct: 39 LVSARSAIPSPSHLNRIPPTLELPSLGSADQFLPEQSVKLVLRLQQRRVYLYQDD----- 93 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP---NEF- 130 + Y + + P G + + +NP + + + P N Sbjct: 94 QVAASYPVAVGKPG---------WETPTGKFRVMHKVVNPVFENPFNGVVTPPGPGNPLG 144 Query: 131 DKA--HNRTG--ADLMIHGECA--------SAGCYAMNNKQMQEIY 164 D+ + G HG S GC M NK ++ ++ Sbjct: 145 DRLIVFAKVGNKGYAGFHGTTNEALIGQAVSHGCVRMKNKDIRALF 190 >gi|296333452|ref|ZP_06875905.1| hypothetical protein BSU6633_20252 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675042|ref|YP_003866714.1| hypothetical protein BSUW23_11835 [Bacillus subtilis subsp. spizizenii str. W23] gi|296149650|gb|EFG90546.1| hypothetical protein BSU6633_20252 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413286|gb|ADM38405.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 176 Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 37/136 (27%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P P VI + K N L + N + Y + D+ PEG + + Sbjct: 24 PGDPYVI-VNKRTNELAVILDN-----KVEGVYSVATGKT---------DDLTPEGEFSV 68 Query: 108 GWNNLNPNSKYFL--SINIGFP-NE-------FDKAHNRTGADLMIHGEC--------AS 149 +NP Y+ SI G P N FD A G IHG S Sbjct: 69 TVKAVNP---YYRKKSIEGGSPDNPLGARWIGFD-AKGTDGRIYGIHGTNREDSIGKFVS 124 Query: 150 AGCYAMNNKQMQEIYA 165 GC M+N ++ ++ Sbjct: 125 NGCIRMHNNEVVHLFQ 140 >gi|171910699|ref|ZP_02926169.1| hypothetical protein VspiD_05985 [Verrucomicrobium spinosum DSM 4136] Length = 337 Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 30/161 (18%) Query: 6 NILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKR-------TSPFHPTVIRIFK 58 ++LF+L + L G + + + SP P ++ + Sbjct: 3 ILILFSLLMALVGTTSALEMPSFHTKGTPTGTPDGPLQPGEYWWHPEISPSGPIMVLVSV 62 Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 IL +++ + L+ + G G P G + I + SK Sbjct: 63 PNQILHVYRNGI-----LIGRSTVST--GAKGH-------ATPGGVFTILEKKQSHRSKK 108 Query: 119 FLSINIGFPN----EFDKAHNRTGADLMIHGECASAGCYAM 155 + + + PN +D +G + G AS GC + Sbjct: 109 YNNAPM--PNMQRLTWDGIAMHSGN---LPGHPASHGCIRL 144 >gi|296118710|ref|ZP_06837286.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium ammoniagenes DSM 20306] gi|295968199|gb|EFG81448.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium ammoniagenes DSM 20306] Length = 396 Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/128 (11%), Positives = 36/128 (28%), Gaps = 26/128 (20%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + + ++ ++K +L+ + G P G Sbjct: 235 NFTIGDRVTAIVDDATKLMTVYKNG-----EVLRSIPVSLGKDG-------GRWATPNGR 282 Query: 105 YYI----GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA----------SA 150 Y I +N + + + G+ + A + + + +HG S Sbjct: 283 YMIGDSHETLLMNSETFGYSIEDGGYKTMVNYATQMSYSGIYVHGAPWSVWAQGNTNTSH 342 Query: 151 GCYAMNNK 158 GC + + Sbjct: 343 GCINVTEE 350 >gi|260549740|ref|ZP_05823957.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624] gi|260407257|gb|EEX00733.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624] Length = 418 Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 51/185 (27%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + E + N+ + P +I K L ++ ++ Sbjct: 254 FLKKLNPKATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 303 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S D +P G Y + NP Y LS+ Sbjct: 304 QMIASFPATIGST---------DTPSPTGTYKVVGVARNPWYSYSPSNFVQGKNLKPLSL 354 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 355 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGN 406 Query: 166 IVRDS 170 VR Sbjct: 407 KVRSG 411 >gi|307945563|ref|ZP_07660899.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4] gi|307771436|gb|EFO30661.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4] Length = 173 Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 26/178 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L+ AL + G + AE ++ Q R P I I +E Sbjct: 1 MRINALSLIIALCCVIAGLFGTAEPSQAAE-------VVGFQDHRFRPGT---IVIRNSE 50 Query: 61 NILEI-WKRNVDAEYVLLKEYKICAWSGT---FGPKIETGDEQ-APEGFY------YIGW 109 L + + Y + AW+G G K D +PE + Sbjct: 51 RRLYLVLRGQRAIRYKVAVGRPAKAWTGQAQIIG-KHVRPDWSPSPEVRRDFPHLPRLIR 109 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIV 167 N ++ + N NR G+ + G S GC M N + +++ V Sbjct: 110 GGAPNNPMGIAAMTLSNGNYAIHGTNRPGS-I---GRAVSYGCIRMANHDIADLFQRV 163 >gi|262369492|ref|ZP_06062820.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] gi|262315560|gb|EEY96599.1| conserved hypothetical protein [Acinetobacter johnsonii SH046] Length = 416 Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 44/158 (27%), Gaps = 54/158 (34%) Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103 + P +I K L ++ ++ ++ + S D +P G Sbjct: 275 RNEVPEDIHLIVAHKGAKQLYLF----NSRNQMIGSFPATIGSS---------DTPSPTG 321 Query: 104 FYYIGWNNLNPNSKY------------FLSINIGFPNEFDKAHNRTG--ADLM------- 142 Y + NP Y LS+ G PN G ++ Sbjct: 322 TYKVTGVAPNPWYSYSPSNFVQGKNLKPLSLPPG-PN---------GPVGNIWIGLSKKS 371 Query: 143 --IHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170 IHG S GC + N ++ V+ Sbjct: 372 FGIHGTPNPSAISKTASHGCIRLTNWDANDLGKKVKSG 409 >gi|94266656|ref|ZP_01290333.1| ErfK/YbiS/YcfS/YnhG [delta proteobacterium MLMS-1] gi|93452703|gb|EAT03254.1| ErfK/YbiS/YcfS/YnhG [delta proteobacterium MLMS-1] Length = 328 Score = 41.4 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 43/145 (29%), Gaps = 33/145 (22%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 +P I I E L + R D VL + + + + P G Sbjct: 122 DFTPTAEPAIVINLAEKRLYYFHRRGDEAAVL--TFPVGIGADY---------GETPTGE 170 Query: 105 YYIGWNNLNPNSKYFLSI--------NIGFPNEFDKAHNR-----TGADLMIHGE--CAS 149 Y I + P+ SI I P D +G IHG S Sbjct: 171 YRITNKLVEPSWTVPPSIRQRRPELPPI-VPPGPDNPMGSHALQLSGGSYYIHGTNRPWS 229 Query: 150 AG------CYAMNNKQMQEIYAIVR 168 G C + + ++ ++ +V Sbjct: 230 IGRRATQGCLRLYPEDIRVLFRLVE 254 >gi|189423885|ref|YP_001951062.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter lovleyi SZ] gi|189420144|gb|ACD94542.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter lovleyi SZ] Length = 295 Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 10/73 (13%) Query: 100 APEGFYYIGWNNLNPNSKYFL-------SINIGFPNEFDKAHNRTGADLM---IHGECAS 149 P G + I + S + + + F G + + G AS Sbjct: 170 TPVGTFRISARHQTHTSSLYKINGEEGDQYPMDYALRFHIDEKNVGYYIHARDLPGRPAS 229 Query: 150 AGCYAMNNKQMQE 162 GC + +++MQE Sbjct: 230 HGCVGLYDEEMQE 242 >gi|294498491|ref|YP_003562191.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551] gi|294348428|gb|ADE68757.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551] Length = 111 Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 35/119 (29%) Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY 118 ++ L+++ L+K Y I P G + I + P + + Sbjct: 10 KQHQLKLYDGA-----KLVKTYPIAVGKMIT---------PTPTGKFKIINKDTTPPAVF 55 Query: 119 -FLSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 L + + P G IHG S GC M+N+ + E+ + V Sbjct: 56 GPLWMGLSKPT--------YG----IHGTNDPASIGRDMSHGCVRMDNEDILELSSAVP 102 >gi|54297508|ref|YP_123877.1| hypothetical protein lpp1553 [Legionella pneumophila str. Paris] gi|53751293|emb|CAH12704.1| hypothetical protein lpp1553 [Legionella pneumophila str. Paris] Length = 244 Score = 41.1 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 38/164 (23%) Query: 29 AEHPLSENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 A +PL+ N + + + P P + I E L + + + ++ Y + Sbjct: 73 ARYPLAANTKLIIPSRFILPNVPRKGVVINLAEYRLYYFPPDDN----VVMTYPV----- 123 Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPN-----------SKYFLSINIGFP----NEFDK 132 G K P G I +NP I FP N + Sbjct: 124 GIGKKGWE----TPLGLSRITSKEINPTWRPTVKLQKAAESIGAPIPSEFPPGPHNPLGQ 179 Query: 133 AHNRTGAD-LMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 R G ++IHG SAGC M + ++ +Y++V Sbjct: 180 HVLRLGWPAILIHGSNRVDGIGAKVSAGCIRMLPEDIEHLYSLV 223 >gi|271964297|ref|YP_003338493.1| hypothetical protein Sros_2792 [Streptosporangium roseum DSM 43021] gi|270507472|gb|ACZ85750.1| hypothetical protein Sros_2792 [Streptosporangium roseum DSM 43021] Length = 264 Score = 41.1 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 45/148 (30%), Gaps = 34/148 (22%) Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE-- 79 +R + E P + ++ PT + + + ++ ++ + L+ Sbjct: 111 ARRTWNALEAPRTPKVL-------VPNGKPTRVEMNLAKQVMVLYVA---GQVKLISHTS 160 Query: 80 ----YKICAWSGTFGPKIET--GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133 C + G K++ GD + P G Y W + Y + N Sbjct: 161 SGSGIPYCETANWNG-KVQRFCGDARTPTGDYKTTWRRNGWHKSYLGQLY----NPI--- 212 Query: 134 HNRTGADLMIHG------ECASAGCYAM 155 + HG AS GC + Sbjct: 213 --FFNGGIAFHGALSVPLAPASHGCVRL 238 >gi|148264085|ref|YP_001230791.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4] gi|146397585|gb|ABQ26218.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4] Length = 278 Score = 41.1 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 9/74 (12%) Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLS--INIGFP--NEFDKAHNRTGADLMIH-----GEC 147 D + P G Y + + N S + + +P N IH G+ Sbjct: 150 DHETPVGVYQVDARHRNHTSSLYKTEDQTAQYPMDNAIRFHVGADNVSYWIHARDLPGKP 209 Query: 148 ASAGCYAMNNKQMQ 161 AS GC ++++ MQ Sbjct: 210 ASHGCVGLSDESMQ 223 >gi|115524406|ref|YP_781317.1| hypothetical protein RPE_2398 [Rhodopseudomonas palustris BisA53] gi|115518353|gb|ABJ06337.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris BisA53] Length = 503 Score = 41.1 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 25/146 (17%) Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 P + + K+ P P VI + + ++++ N L E + G G Sbjct: 73 PKPDAKLEKQLKQAAKPQGPLVIAVSIAQQTIKVYDANG-----LFAESPVST--GMRGH 125 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GE 146 P G + + N S + + + T + + +H G Sbjct: 126 -------STPMGVFSVIQKNKYHRSNLYSGAPMPY------MQRITWSGVAMHAGALPGY 172 Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLR 172 AS GC M Q++++ R R Sbjct: 173 PASHGCIRMPMSFAQKMWSWTRMGAR 198 >gi|299133737|ref|ZP_07026931.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2] gi|298591573|gb|EFI51774.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2] Length = 447 Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 49/175 (28%), Gaps = 43/175 (24%) Query: 4 RYNILLFALFIFLNGCH------------HSRSLIDKAEHPLSENLIISMQKKRT----- 46 R L+ A+ + + S +I + + +K Sbjct: 27 RRIALVSAMALVVLPSAAHAQFFWDSDGFDSDRVIPAPQPEQPRVKHVRKAQKPIVIKET 86 Query: 47 -SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 P P +I I E L+I+ N L E I G G P G + Sbjct: 87 AKPKGPLLISISIEEQRLKIYDSNG-----LYAETPIST--GMRGH-------STPMGVF 132 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAM 155 + S + + + T + + +H G AS GC M Sbjct: 133 SVIGKEKFHRSNIYSGAPMPY------MQRITWSGVAMHAGVLPGYPASHGCIRM 181 >gi|163849618|ref|YP_001637661.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens PA1] gi|163661223|gb|ABY28590.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens PA1] Length = 219 Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 44/168 (26%), Gaps = 30/168 (17%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 A + + + + L M K + +I + K + + V Sbjct: 19 APLPTITAPGAASATPAPTQLRLLAAPARDMAKPAVAAPARVLITVDKATQRMRV---TV 75 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK-YFLSINIGFPNE 129 D + + + + P G + S+ + + P Sbjct: 76 DGKLRY--SWAVSTGRAP---------YKTPAGTFRPFRLEKEHYSREWDDA-----PMP 119 Query: 130 FDKAHNRTGADLMIH--------GECASAGCYAMNNKQMQEIYAIVRD 169 + G + H G AS GC + ++ +VR Sbjct: 120 YSIFFTAAGHAI--HASNATRQLGRPASHGCVRLAPSHAAALFTLVRA 165 >gi|254519126|ref|ZP_05131182.1| S-layer homology and secreted protein with 1 GW repeat fusion protein [Clostridium sp. 7_2_43FAA] gi|226912875|gb|EEH98076.1| S-layer homology and secreted protein with 1 GW repeat fusion protein [Clostridium sp. 7_2_43FAA] Length = 158 Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 6/73 (8%) Query: 101 PEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH---GECASAGCYAMNN 157 P G + + ++ Y ++ I + N + ++ + + +H G + GC A+ Sbjct: 72 PNGRWNSAEYLIEHSNSYKYALVIDY-NRYPVVIGKS-SAIFLHVDVGVP-TWGCVAVEE 128 Query: 158 KQMQEIYAIVRDS 170 M+EI ++ Sbjct: 129 SNMKEILQWIKQG 141 >gi|188582015|ref|YP_001925460.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001] gi|179345513|gb|ACB80925.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001] Length = 224 Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 53/178 (29%), Gaps = 24/178 (13%) Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTS-----PFHPTVIRIFKNENILEIWKRNVD 71 A PL+ + R + P+ P I + E L + + N + Sbjct: 54 AALPADIPGAPSAADPLASTVPQMTAIPRETVPYAGPYAPGTIVVSTAERRLYLIQPNGE 113 Query: 72 AEYVLLKEYKICAWSGTFGP---KIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 A + + G K E D + P L + G N Sbjct: 114 ALRYGVGVGRPGFTWGGMQTVTMKREWPDWRPP-------AEMLRRRPDLPRYMKGGIEN 166 Query: 129 EFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G + IHG S+GC M N+ + ++Y+ V+ R +Q Sbjct: 167 PLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRMTNEDVTDLYSRVKVGARVVVQR 224 >gi|89892890|ref|YP_516377.1| hypothetical protein DSY0144 [Desulfitobacterium hafniense Y51] gi|219666153|ref|YP_002456588.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfitobacterium hafniense DCB-2] gi|89332338|dbj|BAE81933.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219536413|gb|ACL18152.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfitobacterium hafniense DCB-2] Length = 115 Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 5/72 (6%) Query: 100 APEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNK 158 P G Y + +NP + + + P+ N+ + + G AS GC M+N Sbjct: 41 TPLGNYAVATKVMNPGGAFGTRWLGLSLPDYGIHGTNKPAS-I---GTQASLGCIRMHNH 96 Query: 159 QMQEIYAIVRDS 170 ++ +Y V Sbjct: 97 HVEALYDQVGAG 108 >gi|323703741|ref|ZP_08115381.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans DSM 574] gi|323531329|gb|EGB21228.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans DSM 574] Length = 292 Score = 41.1 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 41/128 (32%), Gaps = 27/128 (21%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 +I I K N L ++ VL + + PEG + + + Sbjct: 25 MIIINKKTNQLGFYQNG-----VLTNVFPVATGRRRS---------FTPEGTFKVINKQV 70 Query: 113 NPNSKYFLSINIGFP-NEFDKAH---NRTGADLMIHGECA--------SAGCYAMNNKQM 160 NP Y I G P N + G IHG S GC ++NK + Sbjct: 71 NP-PYYKKHIPGGSPYNPLGPRWLGLSAPGGPYGIHGNNNPASIGTYASNGCIRLHNKDI 129 Query: 161 QEIYAIVR 168 +Y V Sbjct: 130 LWLYDQVP 137 >gi|328544946|ref|YP_004305055.1| ErfK/YbiS/YcfS/YnhG family [polymorphum gilvum SL003B-26A1] gi|326414688|gb|ADZ71751.1| ErfK/YbiS/YcfS/YnhG family [Polymorphum gilvum SL003B-26A1] Length = 413 Score = 41.1 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 48/160 (30%), Gaps = 23/160 (14%) Query: 14 IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAE 73 I + GC + L + + + P + + + +++++ Sbjct: 20 IVVAGC--AAMLFAGISVSVQARDAGTGEAPDAPDHTPLQLLVSLKDQKIKVYRGT---- 73 Query: 74 YVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKA 133 LL+ I + G P G + I S + P F + Sbjct: 74 -ELLRTSPISSGKPGHG---------TPTGVFSILEKRRKHFSNLYN----NAPMPFMQR 119 Query: 134 HNRTGADLM---IHGECASAGCYAMNNKQMQEIYAIVRDS 170 +G L + G AS GC + Q+++ + Sbjct: 120 LTWSGVALHQGHLPGYPASHGCIRLPKAFAQDLFGMTERG 159 >gi|116072872|ref|ZP_01470137.1| hypothetical protein BL107_10197 [Synechococcus sp. BL107] gi|116064398|gb|EAU70159.1| hypothetical protein BL107_10197 [Synechococcus sp. BL107] Length = 166 Score = 41.1 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 44/150 (29%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 ++ + P+ I + + + + + + PK P Sbjct: 27 EELALNAPSPSRILLDLQRREISVMLDG-----RMHGSWPVAIGD----PKTP-----TP 72 Query: 102 EGFYYIGWNNLNP-----------NSKYFLSINIGFPNEFDKAH--NRTG-ADLMIHGEC 147 +G + I +NP S IG D+ +R G + IHG Sbjct: 73 QGEFSILTKEMNPIYVSEKSGQRKELSGPTS-PIG-----DRYLVFHRNGRGEFGIHGTP 126 Query: 148 A----------SAGCYAMNNKQMQEIYAIV 167 S GC M N +++++ +V Sbjct: 127 WPHWVKTRAAVSLGCVRMLNVHVRQLFDLV 156 >gi|237756813|ref|ZP_04585300.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium yellowstonense SS-5] gi|237691029|gb|EEP60150.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium yellowstonense SS-5] Length = 468 Score = 40.7 bits (94), Expect = 0.15, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 51/160 (31%), Gaps = 34/160 (21%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 + + L + K I I+ E L + D YV+ Y I + Sbjct: 261 RKNQIIVVPLKRILPVKDFKYGT-IYINIY--EKRLYYPIKINDESYVI--TYPIGIGTD 315 Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI-------NIGFPNEFDKAHN----R 136 D Q+P G + I +P SI FP D R Sbjct: 316 ---------DAQSPIGEFKISQKRKDPAWYPPESIRKEQPDLPPVFPPGPDNPLGTRAMR 366 Query: 137 TGA-DLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 G ++HG S GC M N+ +++++ +V Sbjct: 367 LGNTSFLMHGTNKEYGIGMKVSHGCIRMYNEDVEKLFEVV 406 >gi|326780422|ref|ZP_08239687.1| putative secreted protein [Streptomyces cf. griseus XylebKG-1] gi|326660755|gb|EGE45601.1| putative secreted protein [Streptomyces cf. griseus XylebKG-1] Length = 235 Score = 40.7 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 6/60 (10%) Query: 111 NLNPNSKYFLSINIGFPNEFDK-AHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIV 167 L+ ++Y ++ IGF +D+ R GA + +H G A+AGC ++ M EI A Sbjct: 157 LLSYGTQYARALVIGF--NYDRPVRGR-GAGIFLHVNGRGATAGCVSVPADAMAEILAWA 213 >gi|210622308|ref|ZP_03293077.1| hypothetical protein CLOHIR_01025 [Clostridium hiranonis DSM 13275] gi|210154296|gb|EEA85302.1| hypothetical protein CLOHIR_01025 [Clostridium hiranonis DSM 13275] Length = 601 Score = 40.7 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 58/179 (32%), Gaps = 51/179 (28%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 +Y ++L ++F+ + ++ ++ +I + N Sbjct: 6 KKYLVVLMSVFMVFAAVVPTTTVEAASKQ---------------------LIIVNTKYNK 44 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L ++ + L+K++ + + P P G + +N Y I Sbjct: 45 LSFYEND-----KLVKKFNVASGK-PSTP--------TPTGKTKVANKIVN-RPYYSGGI 89 Query: 123 NIGFPN-----EFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G PN + G IHG S GC M+N +++ ++ VR Sbjct: 90 PGGHPNNPLGNRWIGIFG--GGTYAIHGNNKESSIGKHVSGGCIRMHNAEIRWLFPQVR 146 >gi|282898625|ref|ZP_06306613.1| ErfK/YbiS/YcfS/YnhG [Cylindrospermopsis raciborskii CS-505] gi|281196493|gb|EFA71402.1| ErfK/YbiS/YcfS/YnhG [Cylindrospermopsis raciborskii CS-505] Length = 204 Score = 40.7 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 31/130 (23%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + ++ + +++ + ++ Y I G K P G + + + Sbjct: 80 VVVDLSDRRVYVYRYD-----QVVASYPIA-----VGKKGWE----TPTGTFKVIHKEHH 125 Query: 114 P------NSKYFLSINIGFP--NEFDKAHNRTGADLMIHGECA--------SAGCYAMNN 157 P K F + P + + + ++ HG S GC M N Sbjct: 126 PIWKHPITGKIFEA-GTDSPLGDRWIGFWSDGKNEIGFHGTPNKDLIGGAVSHGCLRMRN 184 Query: 158 KQMQEIYAIV 167 ++ +Y V Sbjct: 185 PDVRMLYEQV 194 >gi|295705119|ref|YP_003598194.1| putative lipoprotein [Bacillus megaterium DSM 319] gi|294802778|gb|ADF39844.1| putative lipoprotein [Bacillus megaterium DSM 319] Length = 132 Score = 40.7 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 19/123 (15%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R +I + +L + L C + AE P + P ++ KNE Sbjct: 1 MKKRISISIISLCLLLTACGQEPAQTTNAEQPKP---------LDVNLQGPEALQ--KNE 49 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA--P----EGFYYIGWNNLNP 114 + I+K V +K + K G + P EG Y I + P Sbjct: 50 SG--IYKAEVTYGDEKVKNDDVEMIEFEIEKKDSEGKGKMLKPKQIGEGVYEIQTSFSEP 107 Query: 115 NSK 117 + Sbjct: 108 GTY 110 >gi|90578965|ref|ZP_01234775.1| hypothetical Cell wall-associated hydrolase [Vibrio angustum S14] gi|90439798|gb|EAS64979.1| hypothetical Cell wall-associated hydrolase [Vibrio angustum S14] Length = 188 Score = 40.7 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 44/153 (28%), Gaps = 37/153 (24%) Query: 6 NILLFALFIFLNGC----HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 L+ IFL C + S ++ P+ ++ S K E Sbjct: 8 LALITCSLIFLTACESTVNASPQPATLSKQPVVAKTVVKPSVTPISKTE------LKKEQ 61 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 + I G K G P+G + +KY +S Sbjct: 62 EM------------------INFARKYLGTKYVWG-GTTPKG-FDCSGFIKYVYNKYDIS 101 Query: 122 INI---GFPNEFDK----AHNRTGADLMIHGEC 147 I +PN +DK H + G ++ G Sbjct: 102 IPRTTAAYPNLYDKKVSLKHAKVGDLIVFTGTN 134 >gi|294500376|ref|YP_003564076.1| hypothetical protein BMQ_3629 [Bacillus megaterium QM B1551] gi|294350313|gb|ADE70642.1| conserved hypothetical protein [Bacillus megaterium QM B1551] Length = 186 Score = 40.7 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 23/111 (20%) Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEFDKAH------NRTGADLMIHGECA--- 148 + P GF+ + N Y I G P N K G IHG Sbjct: 70 KTPVGFFKVVNKIKN-RPYYTGHIPAGNPRNPLGKRWLGINANGTYGDTYGIHGNNNESS 128 Query: 149 -----SAGCYAMNNKQMQEIYAIVR----DSLRGNMQSHIQ---IQAFPFR 187 S GC M+N ++++Y V+ ++ + +S + + + F+ Sbjct: 129 IGKYVSQGCGRMHNADIEKLYDKVQVGTPVAITYSYKSFVDLTSVYGYKFK 179 >gi|114330610|ref|YP_746832.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas eutropha C91] gi|114307624|gb|ABI58867.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas eutropha C91] Length = 159 Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 41/132 (31%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN------------LNPNSKYFLS- 121 +++ Y I + G + G P G + I P + + S Sbjct: 20 HIVRCYPISSAKNGTG--QQRGSFHTPLGKHIIRAKIGQNVPVNTVFVRRRPTGEIYTSE 77 Query: 122 INIGFPNE-FDKAH-----------NRTGA------DLMIHGECASA--------GCYAM 155 + PN + NR G+ + IHG SA GC M Sbjct: 78 LAANHPNRDWILTRILWLSGCEPGFNRLGSVDTMRRYIYIHGSPDSAEMGKPGSIGCIRM 137 Query: 156 NNKQMQEIYAIV 167 +N + +++ V Sbjct: 138 HNHDLLDLFERV 149 >gi|254504475|ref|ZP_05116626.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11] gi|222440546|gb|EEE47225.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11] Length = 395 Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 44/158 (27%), Gaps = 46/158 (29%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWK 67 L A F+ L+ S + P P + +E +++++ Sbjct: 5 LACAAFLTLSAGSTSLASEAVEGAP-----------DEVQKQDPLHFLVSLDEQRIDVYR 53 Query: 68 RNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP 127 + L++ I + P G + I S Sbjct: 54 GS-----ELIETSPISSGKRG---------NSTPTGVFSILEKRRKHFS----------- 88 Query: 128 NEFDKA-----HNRTGADLMIH-----GECASAGCYAM 155 N +D A T + + +H G AS GC + Sbjct: 89 NLYDNAPMPFMQRLTWSGIALHQGKLPGYPASHGCIRL 126 >gi|238782569|ref|ZP_04626600.1| hypothetical protein yberc0001_22190 [Yersinia bercovieri ATCC 43970] gi|238716496|gb|EEQ08477.1| hypothetical protein yberc0001_22190 [Yersinia bercovieri ATCC 43970] Length = 355 Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 49/176 (27%), Gaps = 39/176 (22%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 + PL +++ + I I E L + + + + Y I Sbjct: 70 ANPDADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPKGQN----KVIVYPI 125 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-------SKYFLSINIGFP-------- 127 G G P + NP K++L+ + P Sbjct: 126 --GIGQLG-------RNTPTMTTSVSQKIPNPTWTPTANIRKHYLAEGVTLPAVVPAGPE 176 Query: 128 NE---FDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLR 172 N F G + +IHG S+GC + ++ ++ V R Sbjct: 177 NPMGLFAMRLAAGGGEYLIHGTNANFGIGMRVSSGCIRLRPDDIEALFKSVPKGTR 232 >gi|121534304|ref|ZP_01666128.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans Nor1] gi|121307074|gb|EAX47992.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans Nor1] Length = 408 Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 41/132 (31%), Gaps = 33/132 (25%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I LE + + L+K Y + P P G + I +N Sbjct: 34 IVINLPSRTLEFYSGST-----LVKVYPVAIGK-PSTP--------TPTGNFSIISKEVN 79 Query: 114 P---NSKYFLSINIGFPNEFDKAHNR--TGADLM--IHGEC--------ASAGCYAMNNK 158 P + ++ P D G M IHG S GC M+ Sbjct: 80 PWWFPPRGGAAV----PPGPDNPLGYRWMGFLPMYGIHGTNTPWAIGTAVSNGCVRMHEA 135 Query: 159 QMQEIYAIVRDS 170 ++E+Y +V Sbjct: 136 DVEELYEVVPYG 147 >gi|15889613|ref|NP_355294.1| hypothetical protein Atu2336 [Agrobacterium tumefaciens str. C58] gi|15157507|gb|AAK88079.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 205 Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 59/211 (27%), Gaps = 59/211 (27%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV------- 53 M+ +LF L +FL GC H+ + + + P + Sbjct: 1 MSISRRGVLFGLPLFLAGCAHTGIGEQRLNYAAKPEEKFPLPAMHLDKVKPELRRQEVTY 60 Query: 54 --------IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 + + L + Y + K GD Sbjct: 61 DTSHPAGTVVVDTPARRLY-YVMGEGRAMR----YGVGVGRQGLALK---GDA------- 105 Query: 106 YIGWNNLNP--------------NSKYFLSINIGFPNEFDKAHN----RTGADLM--IHG 145 YIG + P N K+ + G PN A R G D M +HG Sbjct: 106 YIGRKSEWPSWTPTANMMRRDPRNLKFAGGMPGG-PNNPLGARALYLYRGGNDTMFRLHG 164 Query: 146 ECA--------SAGCYAMNNKQMQEIYAIVR 168 S+GC M N + ++Y+ V Sbjct: 165 TNQPQSIGHAMSSGCIRMLNHDIIDLYSRVP 195 >gi|209525179|ref|ZP_03273722.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328] gi|209494364|gb|EDZ94676.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328] Length = 178 Score = 40.7 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 33/134 (24%) Query: 51 PTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWN 110 VIR+ E + + ++ Y I + P G Y + Sbjct: 53 ELVIRL--GERRVYVMNNA-----RVVTSYPIAIGRNG---------WETPIGHYQVIQM 96 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHN--------RTGADLMIHGECA--------SAGCYA 154 +P ++ L+ +I P D + HG S GC Sbjct: 97 IEDPTWEHPLNGDI-IPPGRDNPLGSHWIGFWTDGTNYIGFHGTPNEETVGQAVSHGCVR 155 Query: 155 MNNKQMQEIYAIVR 168 M N+ + ++ V+ Sbjct: 156 MFNRDVLALFNKVQ 169 >gi|262371780|ref|ZP_06065059.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205] gi|262311805|gb|EEY92890.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205] Length = 167 Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 55/169 (32%), Gaps = 52/169 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I + L + K N K Y I + G + + P G++ + Sbjct: 10 ILIDLAQQTLYLPKHN--------KFYVISSGKNGIGE--QENSGKTPRGWHRVAQKIGQ 59 Query: 114 PNSKYFLSI---NIG----------FPNEFDKAHNR------------TGAD-------L 141 +K + I G FP E D +R G + Sbjct: 60 KAAKNSVFIARQPTGEIYNQQLAEQFP-ERDWILSRILWLDGLEVGFNKGEGCDTFNRYI 118 Query: 142 MIHGECAS--------AGCYAMNNKQMQEIYAIVRD-SLRGNMQSHIQI 181 IHG S GC M N ++ E++ +V + +L +S ++I Sbjct: 119 YIHGTPESQPMGIPMSHGCIRMQNDEILELFELVPEQALVYISESSLEI 167 >gi|220916767|ref|YP_002492071.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954621|gb|ACL65005.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 285 Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 47/170 (27%), Gaps = 36/170 (21%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFH-PTVIRIFKNENILEIWKRNVDAEYVLLKE 79 S + A P ++ P P I + +E L + A Sbjct: 54 ESANPGLDAYVPTPGAALVVPAAWILPPSAAPGSIVVNLSEMRLYLLPGGGAAPV----T 109 Query: 80 YKICAWSGTFGPKIETGDE-QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK------ 132 Y + D + P G + + + P S+ P D+ Sbjct: 110 YPVGIGK----------DRAKTPLGSFTVIGKTVAPTWYPPASMRRDDPTLPDRVPPGPD 159 Query: 133 ------AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 A + ++IHG S GC + + + ++ +V Sbjct: 160 NPLGTHALRLSAGSILIHGTDEPFGIGRKFSHGCVRLYPEDIPRLFEVVP 209 >gi|304404060|ref|ZP_07385722.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus YK9] gi|304347038|gb|EFM12870.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus YK9] Length = 112 Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 35/130 (26%) Query: 52 TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN 111 I + ++ L + ++ ++ Y + + P G + I Sbjct: 4 YRIIVDLSDRQLYLLDGDI-----VVNAYPVGIGKMLT---------RTPTGEFRIINKQ 49 Query: 112 LNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQE 162 NP + L + + P G IHG S GC M N + Sbjct: 50 ENPGGPFGVLWMGLSKP--------HYG----IHGTNEPASIGKVVSHGCIRMYNNDVLA 97 Query: 163 IYAIVRDSLR 172 + A+V R Sbjct: 98 LSALVPVGTR 107 >gi|148255276|ref|YP_001239861.1| hypothetical protein BBta_3881 [Bradyrhizobium sp. BTAi1] gi|146407449|gb|ABQ35955.1| putative ErfK/YbiS/YcfS/YnhG family protein [Bradyrhizobium sp. BTAi1] Length = 568 Score = 40.3 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 23/152 (15%) Query: 25 LIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICA 84 ++ + + ++K+ P P + + ++ L+++ N L E + Sbjct: 52 VVTRKPKARPIQKTVKLEKEAAKPQGPVTVAVSIDKQRLKVYDANG-----LFAEAPVST 106 Query: 85 WSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADL-- 141 G G P G + + S + + P F + +G L Sbjct: 107 --GMKGH-------STPMGVFSVIQKQKFHRSNIYSGA-----PMPFMQRITWSGVALHA 152 Query: 142 -MIHGECASAGCYAMNNKQMQEIYAIVRDSLR 172 ++ G AS GC M IY R R Sbjct: 153 GVLPGYPASHGCIRMPASFATRIYGWTRMGSR 184 >gi|86158711|ref|YP_465496.1| ErfK/YbiS/YcfS/YnhG like protein [Anaeromyxobacter dehalogenans 2CP-C] gi|85775222|gb|ABC82059.1| ErfK/YbiS/YcfS/YnhG like protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 285 Score = 40.3 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 47/170 (27%), Gaps = 36/170 (21%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFH-PTVIRIFKNENILEIWKRNVDAEYVLLKE 79 + + A P ++ P P I + +E L + A Sbjct: 54 EAANPGLDAYVPTPGAPLVVPAAWILPPSAAPGSIVVNLSEMRLYLLPGGGAAPV----T 109 Query: 80 YKICAWSGTFGPKIETGDE-QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK------ 132 Y + D + P G + + + P S+ P D+ Sbjct: 110 YPVGIGK----------DRAKTPLGSFTVIGKTVAPTWYPPASMRRDDPTLPDRVPPGPD 159 Query: 133 ------AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 A + ++IHG S GC + + + ++ +V Sbjct: 160 NPLGTHALRLSAGSILIHGTDEPFGIGRKFSHGCVRLYPEDIPRLFEVVP 209 >gi|319781350|ref|YP_004140826.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167238|gb|ADV10776.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 501 Score = 40.3 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 40/158 (25%) Query: 35 ENLIISMQKKRTSPFHPTV-IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 II + P I K++ E++ + L+ Y S Sbjct: 339 PGTIIKVANFGRLVSTPVARIVADKDKK--EVFAYDAGG--KLVAAYPATIGSS------ 388 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYFLSIN---------IGFPNEFD-------KAHNRT 137 D +P G + + L+PN Y SIN + P + A ++ Sbjct: 389 ---DTPSPSGIHTVSRVALDPNYTYNPSINFKQGQNDKVLTIPPGPNGPVGSVWIALDKP 445 Query: 138 GADLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 + HG S GC + N +E+ +V Sbjct: 446 TYGI--HGTPDPSKIGKTESHGCVRLTNWDARELAKLV 481 >gi|300021594|ref|YP_003754205.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299523415|gb|ADJ21884.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 554 Score = 40.3 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 53/174 (30%), Gaps = 42/174 (24%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 + A + + +R+ + AE P ++ P V + + ++ Sbjct: 19 VLAAALGIADGADARNRVRDAEEP-------QQVTQQQLSGRPVVAVVSIKNQRISVYDA 71 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 N DA + G P G + I N S N Sbjct: 72 NGDAMRAPISS----------GQTSYE----TPVGVFSILQKNEEHYS-----------N 106 Query: 129 EFDKA-----HNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAIVRDSLR 172 +D A T + + +H G AS GC M + Q ++ + R LR Sbjct: 107 IYDDASMPFMQRLTWSGIALHAGALPGYPASHGCVRMPYEFAQSLFPLTRLGLR 160 >gi|93006686|ref|YP_581123.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] gi|92394364|gb|ABE75639.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5] Length = 171 Score = 40.3 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 50/160 (31%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG---------- 103 I I + L +++R ++ EY I G + ++G P G Sbjct: 11 IVISIAQQTLTVYRRQ-----KVIAEYPISTAKNGIGSQQDSG--CTPLGQHIIAEKIGG 63 Query: 104 ----------------FYYIGWNNLNPNSKYFLS--INIG-FPNEFDKAHNRTGA----- 139 Y LNP + LS + + F+K N G Sbjct: 64 NAPSHTVFIGRIATGEIYNAELGALNPKRDWILSRILWLSGLEEGFNKGSNSQGGCDTYH 123 Query: 140 -DLMIHGECAS--------AGCYAMNNKQMQEIYAIVRDS 170 + IHG S GC M N+ + E++ + + Sbjct: 124 RYIYIHGTPDSEPMSVPLSHGCIRMRNQDIIELFEQIEEG 163 >gi|189218234|ref|YP_001938876.1| hypothetical protein Minf_0217 [Methylacidiphilum infernorum V4] gi|189185092|gb|ACD82277.1| Uncharacterized conserved protein [Methylacidiphilum infernorum V4] Length = 314 Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 46/132 (34%), Gaps = 13/132 (9%) Query: 2 TNRYNILLFALF-IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTV---IRIF 57 NR IL +FL L DK E L + I P +R F Sbjct: 41 KNRVWILGITTLSVFLIFSLFLLYLADKIEKMLQKKFPIQQLITVVVPSSNVFEGYMRFF 100 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSG----TFGPKIETGDEQAPEGFYYIG----- 108 + E W + D VL+ + G G + + GD + P G + +G Sbjct: 101 QRIGEGEQWIADSDFVPVLIGRNGLSWGKGLHEPQQGEQKKEGDGKTPAGIFNLGLIMGI 160 Query: 109 WNNLNPNSKYFL 120 + L P S++ L Sbjct: 161 ADELPPGSQWPL 172 >gi|238749439|ref|ZP_04610944.1| hypothetical protein yrohd0001_27560 [Yersinia rohdei ATCC 43380] gi|238712094|gb|EEQ04307.1| hypothetical protein yrohd0001_27560 [Yersinia rohdei ATCC 43380] Length = 351 Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 39/176 (22%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 + PL +++ + I I E L + ++ + + Y I Sbjct: 70 ANPGADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPKDQN----KVVVYPI 125 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-------SKYFLSINIGFP-------- 127 G G P + NP K++L+ + P Sbjct: 126 --GIGQLG-------RNTPTMTTSVSQKIPNPTWTPTANIRKHYLAEGVTLPAVVPAGPE 176 Query: 128 NE---FDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLR 172 N F G + +IHG S+GC + ++ ++ V R Sbjct: 177 NPMGLFAMRLAAGGGEYLIHGTNANFGIGMRVSSGCIRLRPDDIEALFKSVPKGTR 232 >gi|239827637|ref|YP_002950261.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70] gi|239807930|gb|ACS24995.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70] Length = 167 Score = 40.3 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 49/179 (27%), Gaps = 57/179 (31%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ + + + S + K I I K N Sbjct: 1 MRFILTMMLMLFSFLSIPASGTAETKP-----------------------FIIINKAVNQ 37 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL-- 120 L + Y + PEG + + NP Y+ Sbjct: 38 LAFIHNG-----KIEAVYPVATGFNES---------LTPEGLFMVTVKAENP---YYRKQ 80 Query: 121 SINIGFPN-----EFDKAHNR-TGADLM-IHGECA--------SAGCYAMNNKQMQEIY 164 +I G PN + + R T + IHG S GC M N+ ++++Y Sbjct: 81 NIPGGAPNNPLGTRWVGFNARGTDGRIYGIHGTNNPSSIGKYVSKGCVRMYNRDVEQLY 139 >gi|239940022|ref|ZP_04691959.1| putative secreted protein [Streptomyces roseosporus NRRL 15998] gi|239986505|ref|ZP_04707169.1| putative secreted protein [Streptomyces roseosporus NRRL 11379] Length = 231 Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 55/218 (25%), Gaps = 71/218 (32%) Query: 10 FALFIFLNGCHHSRSLIDKAEHPLSENL------IISMQKKRTSPFHPTVIRIFKNENIL 63 A+ + L G + PL + L + + T Sbjct: 3 AAVLLALAGSLGAAPADASDVPPLPDRLADTGGGTQLITAEAPDTGSTTGTVT------- 55 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTF--GPKIETGDEQAPEGFYYIGW------------ 109 W + + G E G P G + + + Sbjct: 56 --WWERRGGRWAEAGSAPARFGANGLAEGATREQGTSTTPTGLFDLPYAFGIEDAPAGTT 113 Query: 110 ---NNLNPNS-----------------------------------KYFLSINIGFPNEFD 131 +N +S +Y ++ IGF N Sbjct: 114 YPYRKVNEDSWWCQDNDSVAYNRWVEPRPAHCRAAEAEHLVSYGTQYARALVIGF-NYEQ 172 Query: 132 KAHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIV 167 NR GA + +H G A+AGC ++ M EI A Sbjct: 173 PVRNR-GAGIFLHVNGRGATAGCVSVPADAMAEILAWA 209 >gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Acinetobacter sp. ADP1] gi|49529986|emb|CAG67698.1| conserved hypothetical protein [Acinetobacter sp. ADP1] Length = 167 Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 51/156 (32%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN-- 111 I + L + K Y I + G + + P G++ I Sbjct: 9 ILVDLETQRLYL--------PKHQKCYSISSGKNGIGE--QENTGKTPRGWHQIAEKIGA 58 Query: 112 ----------LNPNSKYFLS-INIGFPNEFDKAHNR------------TGAD-------L 141 P + + S + FP E D +R G + Sbjct: 59 TALENTVFIGRKPTGELYNSVLAEQFP-ERDWILSRILWLDGLQPDFNQGQGCDTKQRYI 117 Query: 142 MIHGECA--------SAGCYAMNNKQMQEIYAIVRD 169 IHG S GC M N+ + E++ +V + Sbjct: 118 YIHGTPDTEPMGIAMSHGCIRMRNRDVIELFDLVPE 153 >gi|238787126|ref|ZP_04630926.1| hypothetical protein yfred0001_6120 [Yersinia frederiksenii ATCC 33641] gi|238724914|gb|EEQ16554.1| hypothetical protein yfred0001_6120 [Yersinia frederiksenii ATCC 33641] Length = 355 Score = 40.3 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 49/176 (27%), Gaps = 39/176 (22%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 + PL +++ + I I E L + + + + Y I Sbjct: 70 ANPGADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPKGQN----KVIVYPI 125 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-------SKYFLSINIGFP-------- 127 G G P + NP K++L+ + P Sbjct: 126 --GIGQLG-------RNTPTMTTSVSQKIPNPTWTPTANIRKHYLAEGVTLPAVVPAGPE 176 Query: 128 NE---FDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLR 172 N F G + +IHG S+GC + ++ ++ V R Sbjct: 177 NPMGLFAMRLAAGGGEYLIHGTNANFGIGMRVSSGCIRLRPDDIEALFKSVPKGTR 232 >gi|168217736|ref|ZP_02643361.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens NCTC 8239] gi|182380201|gb|EDT77680.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens NCTC 8239] Length = 386 Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 49/140 (35%), Gaps = 26/140 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + ++ + E ++ ++ L+K + G ++ P G Sbjct: 257 DITSNTNYLVFVNIAEQKTYVY-EGSKNDWTLVKTFTCSTG--------IEG-KETPVGV 306 Query: 105 YYIGWNNLNPNS-------KYFLSINIGF-----PNEFDKAHNRTGADLMIHGECASAGC 152 + + S KY++ + P + D+ T +D + G +S GC Sbjct: 307 FTVQNRAPWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDRT---TVSDPTL-GVPSSHGC 362 Query: 153 YAMNNKQMQEIYAIVRDSLR 172 ++ + + +Y V++ + Sbjct: 363 IRLSVEDSKWLYDNVQNGSK 382 >gi|254786218|ref|YP_003073647.1| hypothetical protein TERTU_2190 [Teredinibacter turnerae T7901] gi|242667521|gb|ACS93558.1| conserved hypothetical protein [Teredinibacter turnerae T7901] Length = 68 Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 2/65 (3%) Query: 1 MTNRYNILLFALF--IFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFK 58 M ++ F L + ++ + + KA + L+ +++ +P IRI K Sbjct: 1 MDKYIKVVFFLLLSNVCISAEMPTSARSKKAIANVKPELVAQLKRAGLEYGNPIYIRILK 60 Query: 59 NENIL 63 L Sbjct: 61 KHRNL 65 >gi|92113690|ref|YP_573618.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] gi|91796780|gb|ABE58919.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043] Length = 387 Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 35/134 (26%), Gaps = 43/134 (32%) Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF 119 E L + + E ++ Y I D P G I NP Sbjct: 146 EMRLYYYPPRKEGEPQRVETYAISVGRM---------DWSTPLGETRITAKQENPPWYPP 196 Query: 120 LSI---------------------NIGFPNEFDKAHNRTGADLMIHGEC--------ASA 150 SI +G ++ G +IHG + Sbjct: 197 QSIIEEHAADGRELPDVVPPGPDNPLG---KYKMRLGLPGY--LIHGTNRPQGVGMRVTH 251 Query: 151 GCYAMNNKQMQEIY 164 GC M + ++ ++ Sbjct: 252 GCIRMFPEDVEHLF 265 >gi|15614028|ref|NP_242331.1| hypothetical protein BH1465 [Bacillus halodurans C-125] gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125] Length = 170 Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 26/87 (29%) Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINI--GFP-NE-------FDKA--HNRTGADLMIHGE 146 + P G + I P Y+ NI G P N FD RT IHG Sbjct: 62 KTPVGLFTITVKAEQP---YYRKKNIAGGDPKNPLGTRWLGFDAKDTEGRTYG---IHGT 115 Query: 147 C--------ASAGCYAMNNKQMQEIYA 165 +AGC + NK+++E+YA Sbjct: 116 NRPESIGRYVTAGCIRLQNKEVEELYA 142 >gi|29828110|ref|NP_822744.1| lipoprotein [Streptomyces avermitilis MA-4680] gi|29605212|dbj|BAC69279.1| putative lipoprotein [Streptomyces avermitilis MA-4680] Length = 274 Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 16/159 (10%), Positives = 54/159 (33%), Gaps = 41/159 (25%) Query: 43 KKRTSPFHPTVIRIFKN-----ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 + + V+ ++ ++ + ++ +N + + + ++ + GD Sbjct: 93 QNKIPANSRQVVAVYGEGKDSADSTIVLYTKN-GSTWDQTRSWEGHNGKKGWTTDHHEGD 151 Query: 98 EQAPEGFYYIG----------------------WNNLNPNSKYFLS---INIGF------ 126 +++P G + + + S + I I + Sbjct: 152 KRSPVGVFTLSDAGGVLADPGAELPYTQSASFQAPHYWSRSHWHDFDYVIAIDYNRVKGT 211 Query: 127 -PNEFDKAHNRT-GADLMIHGECA--SAGCYAMNNKQMQ 161 PN+ + ++ G + +H + A ++ C +++ M+ Sbjct: 212 APNDPTRPEGQSKGGSIWLHMDHAGGTSACVSLSKSGME 250 >gi|229190228|ref|ZP_04317230.1| hypothetical protein bcere0002_18970 [Bacillus cereus ATCC 10876] gi|228593212|gb|EEK51029.1| hypothetical protein bcere0002_18970 [Bacillus cereus ATCC 10876] Length = 266 Score = 40.3 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 27/183 (14%) Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R I+L + L+GC + ID P + L KK S + K Sbjct: 6 KARMMIVLLIVSSLLSGCSFGETKID--YKPFVKALDEGDMKKVMSASDDGYAYV-KQRG 62 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL- 120 I +++ D E+ Y+ K G E + N Y Sbjct: 63 IYSTYEQKEDGEHSK-TIYQTSKGIYNTKDKSLYG-NTTQEITSEVDNKNYKEEVNYSTN 120 Query: 121 -------------SINIGFPNE-FDKAHN------RTGADLMIHGECASAGCYAMNNKQM 160 S+++ + N D+ + G D+ G+ ++ G Y + + Sbjct: 121 ISYENGQVQSTDSSLDVSYVNLIVDRLKGIGKLKMKPGGDIKKFGQPSTVG-YTLTESEF 179 Query: 161 QEI 163 Q I Sbjct: 180 QNI 182 >gi|317130360|ref|YP_004096642.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM 2522] gi|315475308|gb|ADU31911.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM 2522] Length = 318 Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 44/131 (33%), Gaps = 30/131 (22%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I I K N L ++ + L K + + PEG + I Sbjct: 31 FIIINKASNELAFFEDS-----KLQKVFSVGTGRENS---------MTPEGTFKIVNKIK 76 Query: 113 NPNSKYFLSINIGFP-NEF-DK-----AHNRTGADLMIHGEC--------ASAGCYAMNN 157 N Y +I G P N D+ A G IHG SAGC M+N Sbjct: 77 N-RPYYSGNIAGGDPQNPLGDRWLGINARGTWGTTYAIHGNNDASSIGGYVSAGCVRMHN 135 Query: 158 KQMQEIYAIVR 168 ++ +Y V+ Sbjct: 136 SEVHWLYDRVK 146 >gi|27382805|ref|NP_774334.1| hypothetical protein blr7694 [Bradyrhizobium japonicum USDA 110] gi|27355978|dbj|BAC52959.1| blr7694 [Bradyrhizobium japonicum USDA 110] Length = 400 Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 52/185 (28%), Gaps = 33/185 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLS--------ENLIISMQKKRTSPFHPT 52 M +FA+F+ G H++ L + S P P Sbjct: 18 MQRAITTAVFAIFMLPAGIVHAQFLFEPQHTFWPGQYAHKHHHRQTNSETAPEPLPKGPL 77 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I I + + ++ L+ + G P G + + Sbjct: 78 QIIISIADQRVSLFDNG-----ALIARSSVSTG--------MEG-HPTPLGVFSVISKQR 123 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAIV 167 S + + + + T + + +H G AS GC + + ++ + Sbjct: 124 WHRSNIYSAAPMPY------MQRITWSGIALHAGVVPGHPASHGCIRLKSDFAVRLWHLT 177 Query: 168 RDSLR 172 + R Sbjct: 178 KRGTR 182 >gi|306836749|ref|ZP_07469711.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium accolens ATCC 49726] gi|304567371|gb|EFM42974.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium accolens ATCC 49726] Length = 401 Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 37/133 (27%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ--APE 102 + TV + ++++K LL+ + D Q P Sbjct: 237 DFTIGDRTVALVDNATKTMKVYKNK-----ELLRTIPVSLGR----------DYQYDTPN 281 Query: 103 GFYYI--GWNNLNPNSKYFLSINI-----GFPNEFDKAHNRTGADLMIHGECA------- 148 G Y I +L +S+ + + G+ E D A + + + +H Sbjct: 282 GRYVIGDQHQSLLMDSE---TFGLPHDAGGYSTEVDWATQMSYSGIYVHSAPWSVWAQGN 338 Query: 149 ---SAGCYAMNNK 158 S GC + + Sbjct: 339 SNTSHGCINVTPE 351 >gi|253578488|ref|ZP_04855760.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850806|gb|EES78764.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 521 Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 41/146 (28%), Gaps = 39/146 (26%) Query: 43 KKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE 102 + T I + +E + ++ D + E I + + D Q P Sbjct: 384 AHGYNDIGNTYIEVDLSEQHMYFYQNGED-----IFESDIVSGD------MRYSDRQTPA 432 Query: 103 GFYYIGWNNLNP--------NSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------ 148 G Y I + N KY + + F + H Sbjct: 433 GIYTIYYKKSPDVLRGKQLANGKYEYEQPVTYWMPF-------NGGIGFHDANWQPYFGG 485 Query: 149 -------SAGCYAMNNKQMQEIYAIV 167 S GC M ++ E+Y I+ Sbjct: 486 DRFMEGGSHGCINMPPEKAAELYNII 511 >gi|227503019|ref|ZP_03933068.1| lipoprotein [Corynebacterium accolens ATCC 49725] gi|227076080|gb|EEI14043.1| lipoprotein [Corynebacterium accolens ATCC 49725] Length = 401 Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 37/133 (27%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQ--APE 102 + TV + ++++K LL+ + D Q P Sbjct: 237 DFTIGDRTVALVDNATKTMKVYKNK-----ELLRTIPVSLGR----------DYQYDTPN 281 Query: 103 GFYYI--GWNNLNPNSKYFLSINI-----GFPNEFDKAHNRTGADLMIHGECA------- 148 G Y I +L +S+ + + G+ E D A + + + +H Sbjct: 282 GRYVIGDQHQSLLMDSE---TFGLPHDAGGYSTEVDWATQMSYSGIYVHSAPWSVWAQGN 338 Query: 149 ---SAGCYAMNNK 158 S GC + + Sbjct: 339 SNTSHGCINVTPE 351 >gi|227503974|ref|ZP_03934023.1| ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium striatum ATCC 6940] gi|227199442|gb|EEI79490.1| ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium striatum ATCC 6940] Length = 434 Score = 39.9 bits (92), Expect = 0.27, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 39/137 (28%) Query: 42 QKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP 101 + + + ++++K LL+ + + D P Sbjct: 267 SSTNFTIGDRVISLVDNATKTMQVFKNG-----QLLRSIPVSLGTDGM------WD--TP 313 Query: 102 EGFYYIG---WNNLNPNSKYFLSI-------NIGFPNEFDKAHNRTGADLMIHGECASA- 150 G Y IG + + ++ Y L++ N+ + A + + + +H S Sbjct: 314 NGRYIIGDEYESLVMDSTTYGLALDAGGYRTNVNY------ATQMSYSGIYVHSAPWSIG 367 Query: 151 ---------GCYAMNNK 158 GC ++ + Sbjct: 368 AQGVYNQSHGCINVSPE 384 >gi|197121993|ref|YP_002133944.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter sp. K] gi|196171842|gb|ACG72815.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter sp. K] Length = 284 Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 46/169 (27%), Gaps = 34/169 (20%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFH-PTVIRIFKNENILEIWKRNVDAEYVLLKE 79 S + A P ++ P P + + +E L + A Sbjct: 53 ESANPGLDAYVPTPGAPLVVPAAWILPPSAAPGSVVVNLSEMRLYLLPGGDAAPV----T 108 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK------- 132 Y + + P G + + + P S+ P D+ Sbjct: 109 YPVGIGKDRA---------KTPLGSFTVIGKTVAPTWYPPASMRRDDPTLPDRVPPGPDN 159 Query: 133 -----AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 A + ++IHG S GC + + + ++ +V Sbjct: 160 PLGTHALRLSAGSILIHGTDEPFGIGRKFSHGCVRLYPEDIPRLFEVVP 208 >gi|226311558|ref|YP_002771452.1| spore protein YkuD [Brevibacillus brevis NBRC 100599] gi|226094506|dbj|BAH42948.1| spore protein YkuD [Brevibacillus brevis NBRC 100599] Length = 123 Score = 39.9 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 39/131 (29%), Gaps = 26/131 (19%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 IRI + L+++ N L++ Y + P G + Sbjct: 1 MKKLPSYNIRISIAKLRLDLFDGN-----RLIRSYPVALGKIAT---------STPRGDF 46 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNN 157 I PNS Y F + ++ + HG S GC M N Sbjct: 47 TIISKVPYPNS-YPGGRLSAFGTLW-MGLSKPHYGI--HGTNDPSSIGKYVSHGCIRMFN 102 Query: 158 KQMQEIYAIVR 168 + + + IV Sbjct: 103 EDVNALAKIVP 113 >gi|322433261|ref|YP_004210482.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX9] gi|321165653|gb|ADW71355.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX9] Length = 330 Score = 39.9 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 25/115 (21%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 +P P + I + +++ V + G G Q P G + Sbjct: 58 VAPSGPVLAVISLKSQRVYVYRNGVLIGVATVST-------GKPGH-------QTPTGVF 103 Query: 106 YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAM 155 + ++ S + S + + ++ T + + +H G AS GC M Sbjct: 104 TVLQKKVHHKSNLYDSAPMPY---MERL---TWSGVAMHAGNLPGYPASHGCIRM 152 >gi|317128455|ref|YP_004094737.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM 2522] gi|315473403|gb|ADU30006.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM 2522] Length = 171 Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 41/145 (28%), Gaps = 50/145 (34%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I + K+ N L + + Y+I K PEG Y I + Sbjct: 28 YIIVNKSTNELAFIIEG-----EVRQIYEIATG------KTNE---HTPEGEYNIIVKAV 73 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLM-----------------IHGECA------- 148 +P Y+ + D L IHG Sbjct: 74 DP---YYR--------KKDIEGGDKNNPLGTRWIGFDAEETDGRTYGIHGTNNPDSIGQY 122 Query: 149 -SAGCYAMNNKQMQEIYAIVRDSLR 172 + GC + N+ ++ +Y V ++ Sbjct: 123 VTLGCIRLKNEDVEILYDQVPIGMK 147 >gi|124022435|ref|YP_001016742.1| hypothetical protein P9303_07261 [Prochlorococcus marinus str. MIT 9303] gi|123962721|gb|ABM77477.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9303] Length = 243 Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 38/172 (22%) Query: 18 GCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLL 77 D E S + + SP T + + + + + L Sbjct: 80 ASASPEVSADNTEASASPEIPADNSEVSVSPEISTKVVLLLGRREISVIRDG-----EKL 134 Query: 78 KEYKICAWSGTFGPKIETGDEQAPE--GFYYIGWNNLNPNSKYFLSINIGFP------NE 129 + + GD + P G + + NP + S + P Sbjct: 135 GPWPVAI-----------GDPRTPTPTGVFKVENKVTNPQYQSTKSGRVN-PAIGVASPL 182 Query: 130 FDKAHN--RTGADLM-IHGECA----------SAGCYAMNNKQMQEIYAIVR 168 D+ ++G + IHG + GC M + +++++ +V Sbjct: 183 GDRWIGFLQSGQNQFGIHGTPWPYWVNARAAVTNGCVRMLHAHVRQLFDVVE 234 >gi|27379261|ref|NP_770790.1| hypothetical protein bll4150 [Bradyrhizobium japonicum USDA 110] gi|27352412|dbj|BAC49415.1| bll4150 [Bradyrhizobium japonicum USDA 110] Length = 541 Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 33/165 (20%) Query: 35 ENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIE 94 + ++ ++ T P P VI + + + ++ N + E + G G Sbjct: 76 KKDAVAEKEVGTKPQGPLVIVVSIDRQKVTVYDTNG-----VFAESPVST--GMKGH--- 125 Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECAS 149 P G + + + +S + + + T + + +H G AS Sbjct: 126 ----STPMGVFSVIQKHKFHHSNIYSGAPMPY------MQRITWSGVAMHAGVLPGYPAS 175 Query: 150 AGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTSKNMQ 194 GC M +++ + R + P MT + Q Sbjct: 176 HGCIRMPMAFAVKMWNWTKMGAR--------VIVSPGEMTPHSFQ 212 >gi|85715479|ref|ZP_01046460.1| hypothetical protein NB311A_17279 [Nitrobacter sp. Nb-311A] gi|85697674|gb|EAQ35550.1| hypothetical protein NB311A_17279 [Nitrobacter sp. Nb-311A] Length = 448 Score = 39.9 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 39/141 (27%), Gaps = 31/141 (21%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 + + P S + P P +I + L+++ N L E Sbjct: 39 QSHGAKHRRLSKPESTAKVTRK------PNGPIIIAVSIRRQTLKVYDANG-----LFAE 87 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGA 139 + G G P G + + S + + + T + Sbjct: 88 TPVST--GMRGH-------STPMGVFSVIQKRKWHRSNIYSDAPMPY------MQRITWS 132 Query: 140 DLMIH-----GECASAGCYAM 155 + +H G AS GC M Sbjct: 133 GIAMHAGVLPGYPASHGCIRM 153 >gi|189346361|ref|YP_001942890.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium limicola DSM 245] gi|189340508|gb|ACD89911.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium limicola DSM 245] Length = 257 Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 53/150 (35%), Gaps = 31/150 (20%) Query: 32 PLSENLIISMQKKRTSPFHPT--VIRIFKNENILEIWKRNVD-AEYVLLKEYKICAWSGT 88 P+ + +++ + ++ S + P ++ + E + I+ Y + + G Sbjct: 115 PVGKTVLLPIDVQKASRYVPVPELLANSRGEREIRIFLDRQYFGAYEKGR----LLFWGP 170 Query: 89 F--GPKIETGDEQAPEGFYYIGWNNLNPNS----KYFLSINIGFPNEFDKAHNRTGADLM 142 G K + P G +++ + + S + +I F G M Sbjct: 171 VSSGRKTY----RTPPGKFFVNYKQRHKLSIKYDNAPMPFSINF----------YGGYFM 216 Query: 143 ----IHGECASAGCYAMNNKQMQEIYAIVR 168 + G AS GC + ++++ V+ Sbjct: 217 HQQSLPGYPASHGCVRLLMTDAEKLFNWVK 246 >gi|126432998|ref|YP_001068689.1| hypothetical protein Mjls_0385 [Mycobacterium sp. JLS] gi|126232798|gb|ABN96198.1| putative conserved exported protein [Mycobacterium sp. JLS] Length = 217 Score = 39.9 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 23/219 (10%), Positives = 58/219 (26%), Gaps = 62/219 (28%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +L A + G + + + + +V+ + + Sbjct: 1 MRRLLTLLCAAAVCLVAGAPVAPATAPWFASSVGPATQVI-----------SVVGVGGSS 49 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN--------- 111 +++++R + + P+ G+ + P G + + + Sbjct: 50 AKMDVYQRTAVGWQPVAAGIPAFIGAKGMAPQTHDGEMKTPMGVFTLDFAFGTEPNPGGG 109 Query: 112 ---------------------------LNPNSKYFLSI-----NIGFPNEFDKA-----H 134 ++ S+ N+ P Sbjct: 110 LPYVQVGPDHWWDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYRHAVVMGVNK 169 Query: 135 NR---TGADLMIHGECA--SAGCYAMNNKQMQEIYAIVR 168 R G +H +AGC A+++ ++ EI +R Sbjct: 170 ARVPGNGGAFFVHSTDGGPTAGCVAIDDGRLVEIMRWLR 208 >gi|291085508|ref|ZP_06571091.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter youngae ATCC 29220] gi|291071175|gb|EFE09284.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter youngae ATCC 29220] Length = 323 Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 48/171 (28%), Gaps = 39/171 (22%) Query: 29 AEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT 88 P +++ + I I E L ++ ++ + Y I G Sbjct: 81 PYVPRPGSVLTIPLQTLLPDAPREGIVINLAELRLYYYQPGTNS----VTVYPI--GIGQ 134 Query: 89 FGPKIETGDEQAPEGFYYIGWNNLNPN-------SKYFLSINIGFP--------NEF--- 130 G GD P + NP + + I P N Sbjct: 135 LG-----GDTLTPTMVTTVSDKRANPTWTPTANIRARYKANGIDLPAVVPAGPDNPMGHH 189 Query: 131 -DKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLR 172 + G L +HG S+GC + + ++ ++ V+ + Sbjct: 190 AIRLAAYGGVYL-LHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVKPGTK 239 >gi|159185065|ref|NP_355095.2| hypothetical protein Atu2133 [Agrobacterium tumefaciens str. C58] gi|159140339|gb|AAK87880.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 460 Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 46/162 (28%), Gaps = 43/162 (26%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 + +I + I K + + ++ + L+ Y S Sbjct: 307 VPGTIIKVVNPGEAKKGQVARIVAHKGIKQVFAYGQDGN----LIAAYPATIGST----- 357 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF--------------PN----EFDKAH 134 D +P G + + LNP Y + I F PN A Sbjct: 358 ----DTPSPSGTHTVERIALNPGYTY--NPKINFKQGQNDKILQIPPGPNGPVGTVWIAL 411 Query: 135 NRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168 ++ + HG S GC + N E+ +VR Sbjct: 412 SKPTYGI--HGTPEPSKIGKTNSHGCIRLTNWDATELAKMVR 451 >gi|154686655|ref|YP_001421816.1| YqjB [Bacillus amyloliquefaciens FZB42] gi|154352506|gb|ABS74585.1| YqjB [Bacillus amyloliquefaciens FZB42] Length = 176 Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 62/188 (32%), Gaps = 59/188 (31%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R+ +L AL + PL N + P P +I + K N Sbjct: 1 MRFFLLSAALLM-------------SPLWPLGANPL---------PGDPYII-VNKATNA 37 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L + K N + Y++ D+ PEG + + +NP Y+ Sbjct: 38 LAVVKDN-----RIQGIYQVATGKT---------DDLTPEGEFTVTVKAVNP---YYRKK 80 Query: 123 NI--GFP-NE-------FDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIY 164 N+ G P N FD A G IHG S GC M N+ + I+ Sbjct: 81 NVEGGAPENPLGVRWIGFD-AKGTDGRIYGIHGTNREELIGGFVSNGCIRMKNRDVIRIF 139 Query: 165 AIVRDSLR 172 I+ + Sbjct: 140 RIIPPGTK 147 >gi|149181895|ref|ZP_01860384.1| hypothetical protein BSG1_07801 [Bacillus sp. SG-1] gi|148850434|gb|EDL64595.1| hypothetical protein BSG1_07801 [Bacillus sp. SG-1] Length = 167 Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 50/146 (34%), Gaps = 35/146 (23%) Query: 44 KRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEG 103 K P P +I + K N + + + + +Y + D+ P+G Sbjct: 19 KNPLPGDPFLI-VNKQTNKIA-YIQGE----EIRHQYSVATGRT---------DDLTPQG 63 Query: 104 FYYIGWNNLNPNSKYFLS-INIGFP-NE-------FDKAHNRTGADLMIHGECA------ 148 + I +P Y S I G P N FD A G IHG Sbjct: 64 LFTIIVKAKDP--YYRKSDIPGGSPDNPLGTRWMGFD-AEGTDGRTYGIHGTNNDDSIGK 120 Query: 149 --SAGCYAMNNKQMQEIYAIVRDSLR 172 S GC M+N +++ ++ V + Sbjct: 121 YISNGCIRMHNAEVETLFDRVPSGTK 146 >gi|189423804|ref|YP_001950981.1| hypothetical protein Glov_0735 [Geobacter lovleyi SZ] gi|189420063|gb|ACD94461.1| conserved hypothetical protein [Geobacter lovleyi SZ] Length = 358 Score = 39.9 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 34/112 (30%), Gaps = 8/112 (7%) Query: 5 YNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILE 64 + L+ + ++GC S + + + S +++I+ E + Sbjct: 45 HFFLIG--LLMISGCAGQPSDSQSSLNGTVITGNQLLVALAESRDSS-MVKIYAFERTVL 101 Query: 65 IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 W+ L G K GD +AP G + + S Sbjct: 102 GWELRTG----PLAGVTGRNGFAPAGDK-REGDGRAPTGLFALESAFGYAAS 148 >gi|182439758|ref|YP_001827477.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|62896365|emb|CAH94386.1| putative thiamine biosynthesis lipoprotein precursor ApbE [Streptomyces griseus subsp. griseus] gi|178468274|dbj|BAG22794.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 235 Score = 39.9 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 6/60 (10%) Query: 111 NLNPNSKYFLSINIGFPNEFDK-AHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIV 167 L+ ++Y ++ +GF +D+ R GA + +H G A+AGC ++ M EI A Sbjct: 157 LLSYGTQYARALVVGF--NYDRPVRGR-GAGIFLHVNGRGATAGCVSVPADAMAEILAWA 213 >gi|295399077|ref|ZP_06809059.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius C56-YS93] gi|312110319|ref|YP_003988635.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1] gi|294978543|gb|EFG54139.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius C56-YS93] gi|311215420|gb|ADP74024.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1] Length = 167 Score = 39.5 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 39/133 (29%), Gaps = 34/133 (25%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + I K N L + + Y + T PEG + + Sbjct: 28 FVIINKAVNQLALIDNG-----KIETVYPVATGVNTL---------LTPEGMFTVTVKAK 73 Query: 113 NPNSKYFL--SINIGFP-NEFDKAH------NRTGADLMIHGECA--------SAGCYAM 155 NP Y+ +I G P N G IHG S GC M Sbjct: 74 NP---YYRKKNIPGGAPDNPLGTRWIGFNAKGTDGRVYGIHGTNNPPSIGKYVSQGCVRM 130 Query: 156 NNKQMQEIYAIVR 168 N ++++Y V Sbjct: 131 YNHDVEQLYEKVP 143 >gi|114777595|ref|ZP_01452576.1| hypothetical protein SPV1_07806 [Mariprofundus ferrooxydans PV-1] gi|114552066|gb|EAU54583.1| hypothetical protein SPV1_07806 [Mariprofundus ferrooxydans PV-1] Length = 154 Score = 39.5 bits (91), Expect = 0.35, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 39/130 (30%), Gaps = 40/130 (30%) Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEFDKAH 134 + Y I + G + Q P G + I + ++ F + P FD H Sbjct: 19 VWYSYPISTAARGTGN--QRDSLQTPLGHHRI-AAMIGADAPIFTAFKARKPFTIFDPLH 75 Query: 135 NRT------------GA----------------DLMIHGE--------CASAGCYAMNNK 158 + G + IHG AS GC M N Sbjct: 76 DDPERDWILSRILWLGGCETGKNRRGAVDTLSRYIYIHGTHAEALAGTPASHGCIRMRNA 135 Query: 159 QMQEIYAIVR 168 + E++A VR Sbjct: 136 DIIELFAHVR 145 >gi|282898177|ref|ZP_06306168.1| ErfK/YbiS/YcfS/YnhG [Raphidiopsis brookii D9] gi|281196708|gb|EFA71613.1| ErfK/YbiS/YcfS/YnhG [Raphidiopsis brookii D9] Length = 198 Score = 39.5 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 31/130 (23%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + ++ + ++ + ++ Y I G K P G + + + Sbjct: 74 VVVDLSDRRVYVYLYD-----QVVASYPIA-----VGKKGWE----TPTGTFKVIHKEHH 119 Query: 114 P------NSKYFLSINIGFP--NEFDKAHNRTGADLMIHGECA--------SAGCYAMNN 157 P K F + P + + + ++ HG S GC M N Sbjct: 120 PIWKHPITGKIFEA-GTDSPLGDRWIGFWSDGKNEIGFHGTPNKDLIGGAVSHGCLRMRN 178 Query: 158 KQMQEIYAIV 167 ++ +Y V Sbjct: 179 SDVRMLYEQV 188 >gi|158423350|ref|YP_001524642.1| signal transduction protein [Azorhizobium caulinodans ORS 571] gi|158330239|dbj|BAF87724.1| signal transduction protein [Azorhizobium caulinodans ORS 571] Length = 406 Score = 39.5 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 41/165 (24%) Query: 36 NLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIET 95 + + + K +L ++ ++ Y S Sbjct: 252 AISVLQVAHDRPTQPVERMEAVKATGMLVLY----GPGDAIIASYPATIGSA-------- 299 Query: 96 GDEQAPEGFYYIGWNNLNPNSKYF-------------LSINIGFPN----EFDKAHNRTG 138 D +PEG Y + +P +Y L + G PN A ++ Sbjct: 300 -DTPSPEGDYKVLRIAHDPRYEYDPKKNFQQGRNTRRLMLPPG-PNNPVGTVWIALSKPT 357 Query: 139 ADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNM 175 + HG +S GC + N +E+ A+++ ++ Sbjct: 358 FGI--HGTPAPSQVSKTSSHGCVRLTNWDAEEVAALIKPGVKMRF 400 >gi|149176367|ref|ZP_01854981.1| hypothetical protein PM8797T_07589 [Planctomyces maris DSM 8797] gi|148844719|gb|EDL59068.1| hypothetical protein PM8797T_07589 [Planctomyces maris DSM 8797] Length = 426 Score = 39.5 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 20/101 (19%) Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFP-NEFDKA 133 ++ Y I D P G + + ++P I P N + Sbjct: 325 FVRRYSIGTGK----------DHSTPTGKFLVKEKLVDPTYYGPDGVIANDDPTNPLGER 374 Query: 134 HNRTGADLMIHGE--------CASAGCYAMNNKQMQEIYAI 166 G IHG S GC M N+ + E+Y + Sbjct: 375 WIDIGDSYGIHGTIDPASIGKAESKGCVRMLNEHVAEVYDL 415 >gi|254423217|ref|ZP_05036935.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335] gi|196190706|gb|EDX85670.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335] Length = 202 Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 40/195 (20%) Query: 3 NRYNI-LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R + L F + L + P + + I + SPF + + + + Sbjct: 8 TRCFVGLCFGSAMALAALEWRNPFLRPTITPENPSSISD-SRLPFSPFRQRELFLDRQSD 66 Query: 62 ILEIWKRNV-------DAEY-------VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 +E+ K++ Y Y++ Q P G + + Sbjct: 67 NVEVAKQSSVTLRLSLSGRYLEVESLGKPTIRYEVAVGQSA---------WQTPIGSFEV 117 Query: 108 GWNNLNPNSKYFLS---INIGFPNEF-DK---AHNRTGADLMIHGEC--------ASAGC 152 P ++ L+ I G N D+ A + HG S GC Sbjct: 118 TSMIEQPTWQHPLTKEDIPPGPDNPLGDRWIGFWTDGKAQIGFHGTNQEELIGQAVSHGC 177 Query: 153 YAMNNKQMQEIYAIV 167 M N+ ++++Y V Sbjct: 178 VRMRNQDIRDLYRRV 192 >gi|257094866|ref|YP_003168507.1| hypothetical protein CAP2UW1_3313 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047390|gb|ACV36578.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 338 Score = 39.5 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 48/159 (30%), Gaps = 23/159 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEH----PLSENLIISMQKKRTSPFHPTVIRI 56 M L+ L L ++ P + + + + +P P V+ + Sbjct: 1 MRFTACFLMALLVSTLARAELPFWGNKASDAAETAPAALPIGHFVWAPQVAPEGPIVVVV 60 Query: 57 FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS 116 +E I ++ V Y + G G P G + + + +S Sbjct: 61 SLDEQIAYAYRNGVRIGYAKVST-------GKKG-------YATPTGVFTTLQKDKDHHS 106 Query: 117 KYFLSINIGFPNE--FDKAHNRTGADLMIHGECASAGCY 153 K + + + + +D G + +S GC Sbjct: 107 KTYNNAPMPYTQRLTWDGVALHAGG---VPDYPSSHGCV 142 >gi|189423824|ref|YP_001951001.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter lovleyi SZ] gi|189420083|gb|ACD94481.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter lovleyi SZ] Length = 448 Score = 39.5 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 24/93 (25%) Query: 100 APEGFYYIGWNNLNPNSKYFLSIN-----------IGFPNEFDKAHNRTGA-----DLMI 143 P G + I +P SI P D + ++I Sbjct: 263 TPVGKFKIVNKAKDPTWTVPPSIQEEMRLEGKEVITSIPPGKDNPLGKYAMKTSLPGILI 322 Query: 144 HGE--CASA------GCYAMNNKQMQEIYAIVR 168 H S GC + ++M+E++ +V+ Sbjct: 323 HSTTKPWSIYTYASHGCIRVYPERMEELFKLVK 355 >gi|325269986|ref|ZP_08136595.1| CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase [Prevotella multiformis DSM 16608] gi|324987709|gb|EGC19683.1| CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase [Prevotella multiformis DSM 16608] Length = 403 Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 6/72 (8%) Query: 47 SPFHPTVIRIFKNENILE---IWKRNVDAEYVLLK---EYKICAWSGTFGPKIETGDEQA 100 P IR FK +L + NV +K +Y I W G FGPK D + Sbjct: 86 QRIKPVKIRSFKGMRVLAGSKVIVNNVKNPLPFIKKKGQYYIQTWHGPFGPKYAENDAKE 145 Query: 101 PEGFYYIGWNNL 112 YYI + Sbjct: 146 HLSAYYIKHSQK 157 >gi|226952587|ref|ZP_03823051.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244] gi|294649883|ref|ZP_06727283.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|226836667|gb|EEH69050.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244] gi|292824257|gb|EFF83060.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 412 Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 50/179 (27%), Gaps = 54/179 (30%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 R L +A I+ + P +I K L ++ ++ ++ + Sbjct: 250 RQLNPRANFNKVGEKIVVANVRNDLPEDIHLIVAHKGAKQLYLF----NSRNQMIASFPA 305 Query: 83 CAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSINIGFPNEF 130 S + +P G Y + NP Y LS+ G PN Sbjct: 306 TIGSTST---------PSPTGTYKVTGVAKNPWYSYSPSNFVQGKNLKPLSLPPG-PN-- 353 Query: 131 DKAHNRTG--ADLMI---------HGECA--------SAGCYAMNNKQMQEIYAIVRDS 170 G ++ I HG S GC + N ++ VR Sbjct: 354 -------GPVGNIWIGLSKKSFGIHGTPNPSMISKNASHGCIRLTNWDANDLGNKVRAG 405 >gi|213422264|ref|ZP_03355330.1| hypothetical protein Salmonentericaenterica_32793 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 63 Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M L + L C L+ + +S + K+ P I+IFK E Sbjct: 1 MRKIAFFL----AMLLMPCVSFAGLLSSSSP----VTPVSKEYKQQLMGSPVYIQIFKEE 52 Query: 61 NILEIWKR 68 L+++ + Sbjct: 53 RTLDLYVK 60 >gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitrosomonas europaea ATCC 19718] gi|30138986|emb|CAD85570.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 326 Score = 39.5 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 41/164 (25%), Gaps = 34/164 (20%) Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 P ++ + + I E L + + + + + + Sbjct: 81 PEDGAEVVLPLRFIIPQAERIGLVINLPEMRLYYFPKPAKGQKPEIITHPVSIGRM---- 136 Query: 92 KIETGDEQAPEGFYYIGWNNLNPNSKYFLSI----------NIG--FPNEFDKAHNRTGA 139 D P G I +P S+ + P D R Sbjct: 137 -----DWNTPLGRTTIVRKQKDPTWTPPQSLKAEAIAEGKPPLSDVVPPGPDNPLGRYAL 191 Query: 140 DLMIHG-------------ECASAGCYAMNNKQMQEIYAIVRDS 170 L + G + GC + + ++E++ +V Sbjct: 192 YLGLPGYLIHSTNKPFGVGMRVTHGCMRLYPEDIEELFNLVPTG 235 >gi|297155098|gb|ADI04810.1| putative lipoprotein [Streptomyces bingchenggensis BCW-1] Length = 236 Score = 39.5 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 63/205 (30%), Gaps = 59/205 (28%) Query: 13 FIFLNGCHHSRSLID----------KAEHPLSENLIISMQ----KKRTSPFHPTVIRIFK 58 I L C + D ++ P+S+ I + + V+ ++ Sbjct: 11 LILLTACGGAGGDGDKSGGQGKQALRSSAPVSDPTRIPKVGDALQAKIPADSRQVVAVYG 70 Query: 59 N-----ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG----- 108 N ++ + ++ + ++ + + + GD+++P G Y + Sbjct: 71 NGVNSADSTVVLYTK-QGKKWERTRSWAAHNGKRGWTTGHREGDKRSPVGVYSLSDAGGV 129 Query: 109 -----------------WNNLNPNSKYFLS---INIGFPN------EFD--KAHNRT-GA 139 + P + + I I + N D + ++ G Sbjct: 130 LPDPGARLPYNQAAAFAAPHYWPKTHWHDFDYVIAIDY-NRVKGTSPLDPTRPQGQSKGG 188 Query: 140 DLMI---HGECASAGCYAMNNKQMQ 161 + + HG SA C ++ M+ Sbjct: 189 SIWLHMDHGSGTSA-CVSVPKSGME 212 >gi|116626900|ref|YP_829056.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus Ellin6076] gi|116230062|gb|ABJ88771.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus Ellin6076] Length = 182 Score = 39.5 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 35/164 (21%) Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 + + + I + + L + + + +L+ ++ + PK Sbjct: 22 VAEALAQDQNTRPARRIVVSIPDRKLAVMEDD-----RVLRVFETAVGA----PKSP--- 69 Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFP---NEFDKAH---NRTGADLMIHGECA--- 148 +P G Y I + +P ++ I P N + G + HG Sbjct: 70 --SPTGTYTIINSIADP--TWYTKGKIVPPGKCNPLGTRWLGLSVKGYGI--HGTNVPSS 123 Query: 149 -----SAGCYAMNNKQMQEIYAIVR--DSLRGNMQSHIQI-QAF 184 S GC M N+ ++E++ +V D + + ++ F Sbjct: 124 IGRNASHGCIRMRNRDVEELFKMVAVGDQVELRGERDAEVAHIF 167 >gi|307544802|ref|YP_003897281.1| ErfK/YbiS/YcfS/YnhG family protein [Halomonas elongata DSM 2581] gi|307216826|emb|CBV42096.1| ErfK/YbiS/YcfS/YnhG family protein [Halomonas elongata DSM 2581] Length = 396 Score = 39.5 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 49/176 (27%), Gaps = 61/176 (34%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I E L + D E ++ Y + D + P G I N Sbjct: 153 IVINVAEMRLYYYPPAKDGEPRTVQTYPLGVGRQ---------DWETPLGNTTITQMVKN 203 Query: 114 PNSKYFLSINIGFPNEFDKA-HNRTGADL------------------------MIHGECA 148 P +P E + H G L +IHG Sbjct: 204 PAW---------YPPESIRQEHAAAGDPLPSVVPAGPNNPLGTRKMRLGIPGYLIHGTNK 254 Query: 149 --------SAGCYAMNNKQMQEIY---------AIVRDSLR-GNMQSHIQIQAFPF 186 S GC M + ++ I+ DS + G + +QA+P+ Sbjct: 255 PEGVGMRVSHGCVRMLPDDAEALFDQISVGTQVRIINDSFKLGWSDGTLYVQAYPY 310 >gi|253701515|ref|YP_003022704.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21] gi|251776365|gb|ACT18946.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21] Length = 281 Score = 39.5 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 28/125 (22%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 P I + + E L ++ L + I G + P G + I Sbjct: 111 EPKFIMVDQAEMFLGAYQYG-----KLAYSFPIALG--------IEG-KMVPNGTFRIDA 156 Query: 110 NNLNPNSKYFLSINIG--FPNEF------DKAHNRTGADLMIHGE-----CASAGCYAMN 156 + S + IG +P + DK+ + IHG AS GC + Sbjct: 157 ADRRHKSNLYQVEGIGRPYPMHYGLRFWVDKSKKEWPSY-WIHGRDLPGHPASHGCIGLY 215 Query: 157 NKQMQ 161 +++MQ Sbjct: 216 DEEMQ 220 >gi|160902066|ref|YP_001567647.1| ErfK/YbiS/YcfS/YnhG family protein [Petrotoga mobilis SJ95] gi|160359710|gb|ABX31324.1| ErfK/YbiS/YcfS/YnhG family protein [Petrotoga mobilis SJ95] Length = 389 Score = 39.5 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 47/145 (32%), Gaps = 34/145 (23%) Query: 38 IISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGD 97 K P + I ++N + ++ + LLK Y + + Sbjct: 247 QALKIGKVKYEESPLRLEINLSQNKMYLYFHD-----QLLKTYIVAVGMSDY-------- 293 Query: 98 EQAPEGFYYIGWNNLNPNSKYF------LSINIGFPNEF-DKAHNRTGADLMIHGE--CA 148 P G+Y I + +P ++ S+ G + ++ + G IHG Sbjct: 294 --TPPGYYRISYKEKDPALYWYDEYIPPGSLMNGMGTRWLQLSNPQYG----IHGTTKPW 347 Query: 149 ------SAGCYAMNNKQMQEIYAIV 167 S GC M N ++ I + Sbjct: 348 EIGKRISHGCIRMFNFDVEVIDFLA 372 >gi|315648484|ref|ZP_07901583.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453] gi|315276178|gb|EFU39524.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453] Length = 465 Score = 39.5 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 27/128 (21%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 P + I + + L + + VLL+ Y + + P G ++I Sbjct: 319 EQPLQVIIDRKHHRLAVVSGS-----VLLRNYAVGLGGA-----------KTPLGDFHIS 362 Query: 109 WNNLNPNS-----KYFLSINIGFPNEFDKAHNRTGA-DLMIHGECASAGCYAMNNKQMQE 162 +NPN + + D + G D+ G S GC M + ++E Sbjct: 363 DKVVNPNGTTKGPYGTRGMQLS-----DTLYAIHGTEDVDSIGANESEGCIRMLKQDVEE 417 Query: 163 IYAIVRDS 170 ++ ++ Sbjct: 418 LFDMIPMG 425 >gi|89099286|ref|ZP_01172164.1| hypothetical protein B14911_08385 [Bacillus sp. NRRL B-14911] gi|89086132|gb|EAR65255.1| hypothetical protein B14911_08385 [Bacillus sp. NRRL B-14911] Length = 180 Score = 39.1 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 48/152 (31%), Gaps = 39/152 (25%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 P P VI I K N L + N I A +G PEG + + Sbjct: 26 PGDPFVI-INKQTNELALVDENRVQTV-------ISAATGKTAD-------LTPEGLFTV 70 Query: 108 GWNNLNPNSKYFL--SINIGFP-NEFDKAH-----NRTGADLM-IHGEC--------ASA 150 P Y+ +I G P N T + IHG S+ Sbjct: 71 TVKAKEP---YYRRKNIPGGSPENPLGTRWIGFDAEETDGRIYGIHGTNEPGSIGKYVSS 127 Query: 151 GCYAMNNKQMQEIYAIVRDSLR----GNMQSH 178 GC M N+ ++ ++ ++ + QS Sbjct: 128 GCVRMQNEAIESLFELIPIGTKVLVVSTGQSF 159 >gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] gi|71847444|gb|AAZ46940.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB] Length = 160 Score = 39.1 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 39/134 (29%), Gaps = 47/134 (35%) Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN---LNPNSKYFLSINIG-------- 125 L EY + G +G Q P G + I L N+ + G Sbjct: 22 LHEYPVSTALAGVGE--VSGSYQTPRGRHIIRAKIGGGLPENAVFVRRRPTGEIWTPELG 79 Query: 126 --FPNEFDKAH---------------NRTG------ADLMIHG--------ECASAGCYA 154 FP D+ NR G + IHG S GC Sbjct: 80 EQFP---DRDWILTRILWLSGCEPGCNRLGCVDTMRRYIYIHGCPDSSEIGSPGSHGCIR 136 Query: 155 MNNKQMQEIYAIVR 168 M N + E++ +V Sbjct: 137 MRNADIVELFDLVP 150 >gi|262376717|ref|ZP_06069945.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter lwoffii SH145] gi|262308427|gb|EEY89562.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter lwoffii SH145] Length = 177 Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 9/51 (17%) Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSLRGNMQSHIQI 181 + IHG S GC M N ++ E++ ++ D+L + + + Sbjct: 118 YIYIHGTPETEKMGEPLSHGCIRMRNPEVAELFDLISEDALVYISEQTLDL 168 >gi|118470112|ref|YP_889004.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium smegmatis str. MC2 155] gi|118171399|gb|ABK72295.1| ErfK/YbiS/YcfS/YnhG family protein [Mycobacterium smegmatis str. MC2 155] Length = 400 Score = 39.1 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 33/114 (28%), Gaps = 25/114 (21%) Query: 46 TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAP--EG 103 + N L + + ++K I P G Sbjct: 239 FKIGDEVIAVADDNTKTLTVRRNG-----EVVKTMPISMGKN-----------STPTNNG 282 Query: 104 FYYIGWNNLNP--NSKYFLSINIGFPN----EFDKAHNRTGADLMIHGECASAG 151 Y IG + +S + + + PN E D A + + + +HG S G Sbjct: 283 VYIIGDRYEHLVMDSSTYG-VPVNSPNGYRTEVDYATQMSYSGIYVHGAPWSVG 335 >gi|322421011|ref|YP_004200234.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M18] gi|320127398|gb|ADW14958.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M18] Length = 303 Score = 39.1 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 34/140 (24%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG-DEQAPEGFYYIGWNNL 112 + + E L ++ ++ + I ++ G G D P G Y+I + Sbjct: 105 VVVNLAELRLFLFPKDSRS--------DILSFPIGIGD---EGTD--TPVGTYHIIEKTV 151 Query: 113 NPNSKYFLSINIGFP-----------NEFDKAHNRTGAD-LMIHGEC--------ASAGC 152 +P + SI P N R D ++IHG +S GC Sbjct: 152 SPYWRVPKSIRRQRPELPGVVPPGPENPLGSHALRLSRDSILIHGTNRPWGVGRRSSHGC 211 Query: 153 YAMNNKQMQEIYAIVRDSLR 172 + + + E++ V +R Sbjct: 212 LRLYPEDIAELFQRVSKGMR 231 >gi|302385394|ref|YP_003821216.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium saccharolyticum WM1] gi|302196022|gb|ADL03593.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium saccharolyticum WM1] Length = 469 Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 28/92 (30%) Query: 97 DEQAPEGFYYIGWNNLN--------PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA 148 D PEG + + + + + Y ++ + F + +H Sbjct: 375 DNTTPEGIFTLSYKETDRVLRGAKQADGTYEYESHVNYWMPF-------NGGIGLHDANW 427 Query: 149 -------------SAGCYAMNNKQMQEIYAIV 167 S GC + + +E+Y +V Sbjct: 428 RTRFGGDIYQTKGSHGCVNLPPDKAKELYGLV 459 >gi|295835297|ref|ZP_06822230.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197696367|gb|EDY43300.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 272 Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 42/122 (34%) Query: 83 CAWSGTFGPK-----IETGDEQAPEGFYY----------------------IGWNNLNPN 115 +W G G K D+++P G Y I + Sbjct: 130 ASWQGHNGKKGWTTAHHENDKRSPVGVYTLSDAGGVLADPGAALPYTRTASIQAPHYWAK 189 Query: 116 SKYFLS---INIGF-------PNEFDKAHNRT-GADLMI---HGECASAGCYAMNNKQMQ 161 S + I I + PN+ + +T G + + HG SA C ++ M+ Sbjct: 190 SHWHDFDYVIAIDYNRVKGTAPNDPTRPEGQTKGGSIWLHMDHGSGTSA-CVSIPKAGMR 248 Query: 162 EI 163 + Sbjct: 249 SL 250 >gi|163852067|ref|YP_001640110.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens PA1] gi|163663672|gb|ABY31039.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens PA1] Length = 248 Score = 39.1 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 45/142 (31%), Gaps = 19/142 (13%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT---FGPKIETGDEQAPEGF 104 P+ P I + E L + + +A + + G K E D + P Sbjct: 114 PYAPGTIVVSTTERRLYLIQPGGEALRYGVGVGRPGFTWGGTQTVTMKREWPDWRPP--- 170 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAM 155 L + G N G + IHG S+GC M Sbjct: 171 ----SEMLRRRPDLPRYMKGGIENPLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRM 226 Query: 156 NNKQMQEIYAIVRDSLRGNMQS 177 N+ + ++Y+ V+ R +Q Sbjct: 227 TNEDVTDLYSRVKVGARVVVQR 248 >gi|114567178|ref|YP_754332.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338113|gb|ABI68961.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 283 Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 38/140 (27%), Gaps = 34/140 (24%) Query: 34 SENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKI 93 + I K+ + I I + L + K Y + P Sbjct: 74 PSSSIRLQNKREGQAWEQPRISIDVVKRRLT----YTSGSFK--KTYPVAVGK-PQTP-- 124 Query: 94 ETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGEC----- 147 P G + I +NP + + + P G IHG Sbjct: 125 ------TPLGNWTIVQKTVNPGGPFGARWMRLSVP------WGGYG----IHGTNRPSSI 168 Query: 148 ---ASAGCYAMNNKQMQEIY 164 S GC M N + E+Y Sbjct: 169 GKAVSHGCVRMYNADVIELY 188 >gi|113952862|ref|YP_731601.1| tonB-dependent receptor protein [Synechococcus sp. CC9311] gi|113880213|gb|ABI45171.1| tonB-dependent receptor protein [Synechococcus sp. CC9311] Length = 162 Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 41/141 (29%), Gaps = 45/141 (31%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE-----GFYYIG 108 I I + +W ++ ++K Y I APE G Y I Sbjct: 33 IEIEVSLKERYLWLKDAG---TVVKRYPIAIG--------------APESPTIPGVYSIL 75 Query: 109 WNNLNPNSK---YFLSINIGFPN--------EFDKAHNRTGADLMIHGECA--------- 148 +P + G PN + K+ G +HG Sbjct: 76 KKVKDPTYYSKSHHKVFPAG-PNDPVGVRFMPYLKSAAD-GKVYAVHGTAWPRWVHLRAA 133 Query: 149 -SAGCYAMNNKQMQEIYAIVR 168 S GC M N + E++ V Sbjct: 134 ASLGCIRMLNSDVIEVFNQVE 154 >gi|186683004|ref|YP_001866200.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102] gi|186465456|gb|ACC81257.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102] Length = 179 Score = 39.1 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 45/168 (26%), Gaps = 19/168 (11%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 + L + +F + S + + + P I I +E L W Sbjct: 20 VALMVVALFSWSAPLAGDRHSTTAIAASVDENGITESDISQTSQPRWIEIDLSEQRLRAW 79 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI-G 125 + L+ Y+I G K T P G + I + NI Sbjct: 80 EGK-----KLVYSYRIS------GGKRST---PTPIGRFRINSKYRTHRMRG-RGYNIPD 124 Query: 126 FPNEFDKAHNRTGADLMIH---GECASAGCYAMNNKQMQEIYAIVRDS 170 P H G S GC + KQ + +Y Sbjct: 125 VPYTMYFYRGYAIHGAYWHNRFGTPVSHGCVNLPVKQARNVYNWASYG 172 >gi|169632913|ref|YP_001706649.1| hypothetical protein ABSDF1149 [Acinetobacter baumannii SDF] gi|169151705|emb|CAP00498.1| conserved hypothetical protein; putative exported protein [Acinetobacter baumannii] Length = 418 Score = 39.1 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 51/185 (27%), Gaps = 56/185 (30%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 FL + + + E + N+ + P +I K L ++ ++ Sbjct: 254 FLKKINPTATFKKVGEKIIVPNVRNDL------PEDIHLIIAHKGAKQLYLF----NSRN 303 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY------------FLSI 122 ++ + S +P G Y + NP Y LS+ Sbjct: 304 QMIASFPATIGSTET---------PSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSL 354 Query: 123 NIGFPNEFDKAHNRTGADLMI---------HGECA--------SAGCYAMNNKQMQEIYA 165 G PN ++ I HG S GC + N ++ Sbjct: 355 PPG-PNA-------PVGNIWIGLSKKSFGIHGTPNPSLISKTTSHGCIRLTNWDANDLGN 406 Query: 166 IVRDS 170 VR Sbjct: 407 KVRSG 411 >gi|206889744|ref|YP_002249108.1| LysM domain protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741682|gb|ACI20739.1| LysM domain protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 309 Score = 39.1 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 29/128 (22%) Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + + ++ + ++ L+ + I + P G + I +NP Sbjct: 103 SEMRLYYFHKKSKEQLVTTFPIGIGDDGV---------ETPMGKFKISHKIVNPPWYVPE 153 Query: 121 SINIGFP-----------NEFDKAHNR-TGADLMIHGEC--------ASAGCYAMNNKQM 160 SI P N R +G +IHG + GC + + + Sbjct: 154 SIKQERPELPAVVPPGPENPLGTHAMRLSGLSYLIHGTNRPWAVGRKVTHGCIRLYPEDI 213 Query: 161 QEIYAIVR 168 +++ IV Sbjct: 214 PKLFDIVP 221 >gi|325921331|ref|ZP_08183189.1| hypothetical protein XGA_2181 [Xanthomonas gardneri ATCC 19865] gi|325548189|gb|EGD19185.1| hypothetical protein XGA_2181 [Xanthomonas gardneri ATCC 19865] Length = 351 Score = 38.7 bits (89), Expect = 0.60, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 47/163 (28%), Gaps = 28/163 (17%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKK-------RTSPF-HPT 52 M R + L L C H+ ++ S Q K S P Sbjct: 1 MPMRPLLTSVFLCTLLI-CGHALAVPFWGARQSSPAETAPAQLKPGEWIWGGVSKGWGPM 59 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + + E ++ + L+ I SG G + P G + I + Sbjct: 60 AVIVSLTEQRAYAYRNGI-----LIGVSTIS--SGKPGH-------ETPTGVFTILQKDK 105 Query: 113 NPNSKYFLSINIGFPNE--FDKAHNRTGADLMIHGECASAGCY 153 + S + + + + +D G + G S GC Sbjct: 106 DHRSNIYNAAPMPYQQRLTWDGVALHAGG---LPGYPESHGCV 145 >gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesorhizobium loti MAFF303099] gi|14021552|dbj|BAB48164.1| mll0608 [Mesorhizobium loti MAFF303099] Length = 426 Score = 38.7 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 49/173 (28%), Gaps = 41/173 (23%) Query: 27 DKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWS 86 A+ P Q + + P I I + L + + + Y I Sbjct: 264 KDAKKPFKVKPEFVPQDVEFTGYEPGTIVIDTSARRLYL-----VESFSTARRYAIAVGR 318 Query: 87 GTF--------GPKIETGDEQAPE-----------GFYYIGWNNLNPNSKYFLSINIGFP 127 G K P G Y G N +I + Sbjct: 319 EGLQFKGTVAVGDKQ-EWPRWIPTLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYL--- 374 Query: 128 NEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDSLR 172 +D + L IHG AS GC+ M N+ + ++Y+ VR + Sbjct: 375 --YD---GKKDTHLRIHGTIAPQSIGTSASNGCFRMINEHVMDLYSRVRVGTK 422 >gi|299140104|ref|ZP_07033273.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX8] gi|298597950|gb|EFI54119.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX8] Length = 330 Score = 38.7 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 36/168 (21%) Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKR---------TSPFHPT 52 ++ + F ++ ++ S+ ++ PL+ NL +Q + +P Sbjct: 7 RRKFIWYVAGGFASIS--TYAPSIWEQVSSPLASNLADGIQALKPGQYLWAPMVAPSGSV 64 Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 + I + +++ VL+ A +G G Q P G + + + Sbjct: 65 LAVISLTSQRVYVYRNG-----VLIGA--ATASTGKPGH-------QTPTGVFTVLQKQV 110 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAM 155 + S + S + + T + + +H G AS GC M Sbjct: 111 HHKSNLYDSAPMPY------MQRLTWSGVAMHAGNLPGYPASHGCIRM 152 >gi|170750298|ref|YP_001756558.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans JCM 2831] gi|170656820|gb|ACB25875.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans JCM 2831] Length = 221 Score = 38.7 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 18/178 (10%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 A+ + + + L A P + T++ + + Sbjct: 51 AVPVANAALNPADPLNADAAVPQMSAIPRETVAYNGPYGAGTIVVSTAERRLYYVLGGGQ 110 Query: 71 DAEYVLLKEYKICAWSG--TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 Y + W G T K E D + P P+ ++ + N Sbjct: 111 ALRYGVGVGRPGFTWGGVQTITMKREWPDWRPP-----ATMLKRRPDLPRYMKGGLE--N 163 Query: 129 EFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G + IHG S+GC M N + ++Y + + +Q Sbjct: 164 PLGARAMYLGGSIYRIHGSNEPETIGTAVSSGCIRMTNDDVTDLYTRAKVGTKVIVQR 221 >gi|147677766|ref|YP_001211981.1| hypothetical protein PTH_1431 [Pelotomaculum thermopropionicum SI] gi|146273863|dbj|BAF59612.1| hypothetical protein [Pelotomaculum thermopropionicum SI] Length = 218 Score = 38.7 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 23/79 (29%) Query: 100 APEGFYYIGWNNLNPNSKY---FLSINIGFPNEFDKAHNRTGADLMIHGECA-------- 148 P G + + NP + +L +NI + N G IHG A Sbjct: 66 TPVGNWEVISMETNPPAVMGTRWLGLNIPYGN--------YG----IHGTNAPHSIGSFA 113 Query: 149 SAGCYAMNNKQMQEIYAIV 167 S GC M N ++E++ +V Sbjct: 114 SHGCIRMFNSDVEELFTLV 132 >gi|220932970|ref|YP_002509878.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168] gi|219994280|gb|ACL70883.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168] Length = 181 Score = 38.7 bits (89), Expect = 0.61, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 50/161 (31%), Gaps = 26/161 (16%) Query: 55 RIFKNENILEIWKRNVDAEYVLLKEYKICAW----SGTFGPKIETGDEQAPEGFYYIGWN 110 +I+ N + +N + ++ Y + G + P G +G Sbjct: 4 QIYIELNTRRLILKNNGS---IIATYPVAIGKPSTPTPVGDFKVLNKIKNPGGV--LGTR 58 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRDS 170 L + P + G+ S GC M N+ ++E+Y V Sbjct: 59 WLQFTWQQHGIHGTNKP--------------WLIGQAVSNGCVRMYNRDVEELYDYVSVG 104 Query: 171 LRGNMQSHIQIQAFPFRMTSKNMQLYQNNPNYSFWNMLKLG 211 ++ + + P + N + + N F +K G Sbjct: 105 TPVIIRKNFSFISPP---GTGNSREHSNTNRSYFIYTVKRG 142 >gi|118578915|ref|YP_900165.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM 2379] gi|118501625|gb|ABK98107.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM 2379] Length = 292 Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 9/73 (12%) Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIG--FP--NEFDKAHNRTGADLMIH-----GECA 148 + P G + I +L S + + N +P N G +H G A Sbjct: 160 NETPTGLFRITARHLTHTSSLYKTANDEEQYPMDNAMRFHVGPDGVSYWLHARDLPGRPA 219 Query: 149 SAGCYAMNNKQMQ 161 S GC + +++MQ Sbjct: 220 SHGCIGLYDEEMQ 232 >gi|254433454|ref|ZP_05046962.1| hypothetical protein NOC27_385 [Nitrosococcus oceani AFC27] gi|207089787|gb|EDZ67058.1| hypothetical protein NOC27_385 [Nitrosococcus oceani AFC27] Length = 151 Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 2/96 (2%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + + L A+F+ L+ ++ E + N + M +K T+ ++ + K E Sbjct: 24 MLKKLSCLGIAIFLILSIPLSQGESHERYEKFIPINYALGMDEKYTATGS--IVAVDKEE 81 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 I+ I + Y + + KI K G Sbjct: 82 KIVTISANSESHAYKVTDDTKIWLDRSQIKAKNMEG 117 >gi|77165266|ref|YP_343791.1| hypothetical protein Noc_1790 [Nitrosococcus oceani ATCC 19707] gi|76883580|gb|ABA58261.1| hypothetical protein Noc_1790 [Nitrosococcus oceani ATCC 19707] Length = 128 Score = 38.7 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 2/96 (2%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M + + L A+F+ L+ ++ E + N + M +K T+ ++ + K E Sbjct: 1 MLKKLSCLGIAIFLILSIPLSQGESHERYEKFIPINYALGMDEKYTATGS--IVAVDKEE 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETG 96 I+ I + Y + + KI K G Sbjct: 59 KIVTISANSESHAYKVTDDTKIWLDRSQIKAKNMEG 94 >gi|197117754|ref|YP_002138181.1| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter bemidjiensis Bem] gi|197087114|gb|ACH38385.1| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family [Geobacter bemidjiensis Bem] Length = 281 Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 36/129 (27%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 P I + + E L ++ L+ + I + P G + I Sbjct: 111 EPKFIMVDQAEMFLGAYEYG-----KLVYSFPIALGIQG---------KMVPNGTFRIDA 156 Query: 110 NNLNPNSKYFLSINIG--FPNEF------DK---------AHNRTGADLMIHGECASAGC 152 + S + IG +P + DK H R + G AS GC Sbjct: 157 ADRRHQSNLYQVEEIGRPYPMHYGLRFWVDKSKEDWPTYWIHGRD-----LPGHPASHGC 211 Query: 153 YAMNNKQMQ 161 + +++MQ Sbjct: 212 IGLYDEEMQ 220 >gi|288942661|ref|YP_003444901.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180] gi|288898033|gb|ADC63869.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180] Length = 321 Score = 38.7 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 42/139 (30%), Gaps = 38/139 (27%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + + E L + N E ++ Y I P G + + + Sbjct: 108 IVVNRAEKRLYYYPPNSPNE---VRIYAITVGKDAMA---------TPLGNFDVIEKRKD 155 Query: 114 PN------------SKYFLSINIGFPNEFDKAHNR-----TGADLMIHGEC--------A 148 P +K + + P D R + D +IHG Sbjct: 156 PTWTPGPQVRANHAAKGHI-LPPTVPPGPDNPLGRFAMRLSNPDYLIHGTNQPWGMGLEV 214 Query: 149 SAGCYAMNNKQMQEIYAIV 167 S GC M + ++E+Y + Sbjct: 215 SGGCIRMYPEGIEELYGMA 233 >gi|300702670|ref|YP_003744270.1| hypothetical protein RCFBP_10313 [Ralstonia solanacearum CFBP2957] gi|299070331|emb|CBJ41623.1| conserved protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 164 Score = 38.7 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 17/99 (17%) Query: 101 PEGFYYIGWNNLNPNSKY------FLSINIGF-----PNEFDKAHNRTGADLMIHGE--C 147 PEG Y+I + L N+ + + + P + + R G +HG Sbjct: 67 PEGDYWIQPSQLWENNWFKSLVRTPRASWGNYRLTIHPYPGTQTYGRGGF--FLHGGTVP 124 Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA-FP 185 SAGC + QM + ++ +L G + ++Q+ +P Sbjct: 125 GSAGCIDLV-GQMDRFVSRLKQALGGLPECYVQLYVRYP 162 >gi|218530824|ref|YP_002421640.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium chloromethanicum CM4] gi|254561810|ref|YP_003068905.1| hypothetical protein METDI3404 [Methylobacterium extorquens DM4] gi|218523127|gb|ACK83712.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium chloromethanicum CM4] gi|254269088|emb|CAX25051.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens DM4] Length = 222 Score = 38.7 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 45/142 (31%), Gaps = 19/142 (13%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT---FGPKIETGDEQAPEGF 104 P+ P I + E L + + +A + + G K E D + P Sbjct: 88 PYAPGTIVVSTTERRLYLIQPGGEALRYGVGVGRPGFTWGGTQTVTMKREWPDWRPP--- 144 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAM 155 L + G N G + IHG S+GC M Sbjct: 145 ----SEMLRRRPDLPRYMKGGIENPLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRM 200 Query: 156 NNKQMQEIYAIVRDSLRGNMQS 177 N+ + ++Y+ V+ R +Q Sbjct: 201 TNEDVTDLYSRVKVGARVVVQR 222 >gi|319650710|ref|ZP_08004849.1| hypothetical protein HMPREF1013_01454 [Bacillus sp. 2_A_57_CT2] gi|317397567|gb|EFV78266.1| hypothetical protein HMPREF1013_01454 [Bacillus sp. 2_A_57_CT2] Length = 315 Score = 38.7 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 20/141 (14%) Query: 24 SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE----NILEIWKRNVDAEYVLLKE 79 S ++ L + + + +I + K+ L+ + + + ++ + Sbjct: 107 SYQTPSKIKLQIVACVYKKDTQLKSEAQQMIVVKKSSVKTAATLQTY-QKQNGKW-MQAS 164 Query: 80 YKICAWSGTFG-PKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP------NEF-- 130 + A G G K + GD P G Y +G + + +P N++ Sbjct: 165 SPVAAVIGKEGMGKTKEGDASTPYGTYRLGTSFGW----GPKPSGMSYPFKAITSNDYWV 220 Query: 131 -DKAHNRTGADLMIHGECASA 150 D + + G + Sbjct: 221 DDVSSADYNKWITYTGNPYTR 241 >gi|154247143|ref|YP_001418101.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2] gi|154161228|gb|ABS68444.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2] Length = 197 Score = 38.7 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 39/138 (28%), Gaps = 27/138 (19%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF---GPK----IETGDEQ 99 + P I I +E L + + Y + F G K + Sbjct: 62 PKYAPGTIVIRTSERRLY-YVTSRGEALR----YGVGVGREGFQWSGVKTVSAKKEWPGW 116 Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASA 150 P L + G N G+ L IHG S+ Sbjct: 117 TP------PAQMLRRRPDLPRYMPGGIENPLGARAMYLGSSLYRIHGSNEPETIGQAVSS 170 Query: 151 GCYAMNNKQMQEIYAIVR 168 GC+ M N + ++Y VR Sbjct: 171 GCFRMTNDDVVDLYNRVR 188 >gi|213965906|ref|ZP_03394097.1| ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium amycolatum SK46] gi|213951484|gb|EEB62875.1| ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium amycolatum SK46] Length = 389 Score = 38.7 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 14/74 (18%) Query: 100 APEGFYYIGWNNLN---PNSKYFLSI-NIGFPNEFDKAHNRTGADLMIHGECA------- 148 P G Y IG N + Y LS+ N G+ + A + + + +HG Sbjct: 265 TPNGQYIIGDRNETMVMDSRTYGLSLENGGYVTPVNYATQMSYSGIYVHGAPWSTWAQGS 324 Query: 149 ---SAGCYAMNNKQ 159 S GC + + Sbjct: 325 VNQSHGCINVTDAN 338 >gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Aromatoleum aromaticum EbN1] gi|56314551|emb|CAI09196.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 162 Score = 38.7 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 8/37 (21%) Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 + IHG S GC M N+ + E++ +V Sbjct: 117 YIYIHGTPDGEPMGVPRSHGCIRMRNRDIIELFELVP 153 >gi|240139393|ref|YP_002963868.1| hypothetical protein MexAM1_META1p2838 [Methylobacterium extorquens AM1] gi|240009365|gb|ACS40591.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens AM1] Length = 222 Score = 38.4 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 45/142 (31%), Gaps = 19/142 (13%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGT---FGPKIETGDEQAPEGF 104 P+ P I + E L + + +A + + G K E D + P Sbjct: 88 PYAPGTIVVSTTERRLYLIQPGGEALRYGVGVGRPGFTWGGTQTVTMKREWPDWRPP--- 144 Query: 105 YYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAM 155 L + G N G + IHG S+GC M Sbjct: 145 ----SEMLRRRPDLPRYMKGGIENPLGARAMYLGNTIYRIHGSNEPETIGTAVSSGCIRM 200 Query: 156 NNKQMQEIYAIVRDSLRGNMQS 177 N+ + ++Y+ V+ R +Q Sbjct: 201 TNEDVTDLYSRVKVGARVVVQR 222 >gi|27382343|ref|NP_773872.1| hypothetical protein blr7232 [Bradyrhizobium japonicum USDA 110] gi|27355514|dbj|BAC52497.1| blr7232 [Bradyrhizobium japonicum USDA 110] Length = 205 Score = 38.4 bits (88), Expect = 0.77, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 45/168 (26%), Gaps = 40/168 (23%) Query: 20 HHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKE 79 + P+ + + P I + +E L + +N A Sbjct: 47 GGGPNFFRGGSSPIPRTTVNYSGN-----YAPGTIVVNTSERRLYLVLQNGQAL-----R 96 Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN-----------SKYFLSINIGFPN 128 Y I G G + I P+ + G N Sbjct: 97 YGIGVGRDG----FRWG------GVHRITAKKEWPDWTPPSQMLARRPDLPRHMKGGIEN 146 Query: 129 EFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIV 167 G+ L IHG S+GC+ M N + ++Y+ V Sbjct: 147 PLGARAMYLGSTLYRIHGSNEPETIGQAVSSGCFRMTNDDVSDLYSRV 194 >gi|223940400|ref|ZP_03632254.1| conserved hypothetical membrane protein [bacterium Ellin514] gi|223890949|gb|EEF57456.1| conserved hypothetical membrane protein [bacterium Ellin514] Length = 259 Score = 38.4 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 40/138 (28%), Gaps = 20/138 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPF---HPTVIRIF 57 M + LF++ G S + E + P + F Sbjct: 1 MRKTALVALFSILFTATGAWAGESTSAFPSPEIPEFTSCKQLVLVITKNWQAVPGAVWRF 60 Query: 58 KNENILEIWKRNVDAEYVLLKEYKICAWSGT------FGPKIETGDEQAPEGFYYIGWNN 111 + + WK+ V++ + G GP + GD ++P G + + Sbjct: 61 ERADEHSPWKKVGGKIPVVVGRNGLAWGKGLNPPVDLPGPHKKEGDGKSPAGMFRLSS-- 118 Query: 112 LNPNSKYFLSINIGFPNE 129 + + PNE Sbjct: 119 ---------AFGLAEPNE 127 >gi|254501060|ref|ZP_05113211.1| ErfK/YbiS/YcfS/YnhG superfamily [Labrenzia alexandrii DFL-11] gi|222437131|gb|EEE43810.1| ErfK/YbiS/YcfS/YnhG superfamily [Labrenzia alexandrii DFL-11] Length = 159 Score = 38.4 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 51/163 (31%), Gaps = 22/163 (13%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA-EYVLLKEYKICAWSGT--F 89 L + + F P I I +E L + A Y + + +W+G Sbjct: 9 LEKAQAAEVVGFSGHQFRPGTIVIKNSERRLYLVLNGRQAIRYKVAVGKRQKSWTGQAQI 68 Query: 90 GPKIETGDEQ-APEGFY------YIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM 142 K D +PE + N ++ + N NR G+ + Sbjct: 69 TAKYIKPDWSPSPEVRRDFPHLPTVIRGGAPNNPMGVAAMTLSNGNYAIHGTNRPGS-I- 126 Query: 143 IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 G S GC M N +Q+++ V Q + A P Sbjct: 127 --GRAVSYGCIRMANHDIQDLFRRV--------QVRTPVIALP 159 >gi|220932691|ref|YP_002509599.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H 168] gi|219994001|gb|ACL70604.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H 168] Length = 225 Score = 38.4 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 52/160 (32%), Gaps = 50/160 (31%) Query: 59 NENILEIWKRNVDAEY------VLLKEYKICAWSGTFGPKIETGDEQA--PEGFYYIGWN 110 + EI+ + + Y ++K ++ A G K G+ + P G Y Sbjct: 65 EDVRHEIYFHDTEKVYWTDNTGKIIKSWQ--ASDDIIGGKNREGETRESLPAGEYIATGY 122 Query: 111 NLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA---------------------- 148 N Y + G+ + D + R IHG + Sbjct: 123 MTGIN--YGRAYGTGYIDTGD-SRGRD-----IHGGGSRLTSKDEVAQDFVNKVGAYAPR 174 Query: 149 -----SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA 183 + GC M+N+ ++E+ ++ D ++I + Sbjct: 175 QELLPTYGCIRMHNEDVEELCNLISD-----EGNNIPLHV 209 >gi|308270996|emb|CBX27606.1| hypothetical protein N47_H24280 [uncultured Desulfobacterium sp.] Length = 322 Score = 38.4 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 34/125 (27%) Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 + ++ D ++ Y + G G + P G + + NP S Sbjct: 127 EMRLYYFPDDDTKSVI-TYPV-----GIGD---EG-KDTPLGIFSVIEKIKNPAWYVPKS 176 Query: 122 INIGFP-----------NEFDKAHNRTGADLM---IHGEC--------ASAGCYAMNNKQ 159 I + P N R + IHG S GC M + Sbjct: 177 IQLEKPELPAVVPPGPDNPMGSRALR--LSIWTVLIHGTNRPWGIGTRNSHGCIRMYEED 234 Query: 160 MQEIY 164 +Q+++ Sbjct: 235 IQKLF 239 >gi|75674351|ref|YP_316772.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] gi|74419221|gb|ABA03420.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 172 Score = 38.4 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 38/146 (26%), Gaps = 47/146 (32%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY-- 106 + P I + +E L + + A Y + K +G + EG Y Sbjct: 36 YAPGTIVVKTSERRLYLIIDSDRAL-----RYPVGVGRAG---KQWSGAARI-EGKYRNP 86 Query: 107 -----------------IGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC-- 147 + N ++ + G IHG Sbjct: 87 AWAPPAEVKRDNPRIADVIPGGSPANPMGVAAMTLS-----------GGGQYAIHGTNRP 135 Query: 148 ------ASAGCYAMNNKQMQEIYAIV 167 S GC M N + ++Y V Sbjct: 136 GSIGRFVSYGCIRMYNADIDDLYRRV 161 >gi|182678754|ref|YP_001832900.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182634637|gb|ACB95411.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 199 Score = 38.4 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 53/198 (26%), Gaps = 39/198 (19%) Query: 8 LLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRT------------SPFHPTVIR 55 LLF + I + L + M+ + + + P I Sbjct: 13 LLFGMAISFQALAYEYDLNGQPVPDGQNYSNSRMEGRPQAVAPARETVSYSTRYAPGTIV 72 Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF---GPK----IETGDEQAPEGFYYIG 108 + +E L + + Y I F G K P Sbjct: 73 VSTDERRLY-YVLPNNQAIR----YGIGVGRPGFEWHGVKTVAMKREWPSWTP------P 121 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQ 159 L + G N G L IHG S+GC M N+ Sbjct: 122 AQMLRRRPDLPRFMPGGPDNPLGARALYIGGTLYRIHGSNEPETIGQAVSSGCIRMTNED 181 Query: 160 MQEIYAIVRDSLRGNMQS 177 + ++Y+ V+ R +Q Sbjct: 182 VTDLYSRVKVGTRVIVQR 199 >gi|308272916|emb|CBX29520.1| hypothetical protein N47_J05010 [uncultured Desulfobacterium sp.] Length = 164 Score = 38.4 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 46/165 (27%), Gaps = 27/165 (16%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 L QK + + I I N L + + + + ++ G Sbjct: 2 LKAKNSALKQKLGSFNPNGVYIVIDTGLNRLYLKRGSKTIQEAIVSCGSGNILKDPSG-- 59 Query: 93 IETGDEQAPEGFYY-----IGWNNLNPNSKY---FLSINIGFPNEF-------DKAHNRT 137 P G Y+ I P+ + +I P++ D A Sbjct: 60 KRQWVFDTPMGEYHVKSKKISPVWTRPDWAFIEEGEAIPKD-PSQRIEKGVLGDYALGF- 117 Query: 138 GADLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDSLRGN 174 G IHG S GC + +K ++ IY R Sbjct: 118 GNGYFIHGTLYTRLLGRNVSHGCIRVGDKDLKTIYNAAELGTRIF 162 >gi|295702691|ref|YP_003595766.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319] gi|294800350|gb|ADF37416.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319] Length = 196 Score = 38.4 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 16/88 (18%) Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK-----AHNRTGADLMIHGECA---- 148 PEG + I N Y +I G P N D+ A G IHG Sbjct: 4 TPEGTFSIVNKIKN-RPYYKDNIRGGDPRNPLGDRWLGLNARGTYGTTYAIHGNNNPSSI 62 Query: 149 ----SAGCYAMNNKQMQEIYAIVRDSLR 172 S+GC M +++++ ++ V+ + Sbjct: 63 GTYASSGCIRMYDEEVRWLFDRVQTGTK 90 >gi|167032787|ref|YP_001668018.1| hypothetical protein PputGB1_1779 [Pseudomonas putida GB-1] gi|166859275|gb|ABY97682.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida GB-1] Length = 344 Score = 38.4 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 44/146 (30%), Gaps = 28/146 (19%) Query: 30 EHPLSENLIISMQKKR---------TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80 + P L ++ + SP P + + E +++ + + Sbjct: 23 QVPTPAALRSQLESLKPGQFLWYPQVSPVGPVTVVVSLTEQRAYVYRNGIAIGVSTVSS- 81 Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE--FDKAHNRTG 138 G G + P G + I + S + S + + +D G Sbjct: 82 ------GKPG-------RETPTGVFSILQKKVEHKSSLYNSAPMPYMERLTWDGIALHAG 128 Query: 139 ADLMIHGECASAGCYAMNNKQMQEIY 164 + G AS GC + +++Y Sbjct: 129 H---LPGYPASHGCVRLPMDFAKKLY 151 >gi|328544242|ref|YP_004304351.1| ErfK/YbiS/YcfS/YnhG [polymorphum gilvum SL003B-26A1] gi|326413984|gb|ADZ71047.1| ErfK/YbiS/YcfS/YnhG [Polymorphum gilvum SL003B-26A1] Length = 141 Score = 38.4 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 44/148 (29%), Gaps = 35/148 (23%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 + ++ I ++ +++ L+ + + + P G Y Sbjct: 20 ALAASVLVHIDLSDQEMQVSVGG-----RLVHTWPVSTARRG---------YRTPTGRYR 65 Query: 107 IGWNNLNPNSKYFLSINIGF-PNEFDKAHNRTGADLMIHGE--------CASAGCYAMNN 157 S + + P + + G + HG AS GC ++ Sbjct: 66 PTRLARVWYSTIY-----DYAPMPYSIFF-KGGYAI--HGTTEIRNLGRPASHGCVRLHP 117 Query: 158 KQMQEIYAIVRDSLRGNMQSHIQIQAFP 185 + ++ ++ N ++ +I P Sbjct: 118 DNARALFELIEA----NGKASTEIVIVP 141 >gi|282864245|ref|ZP_06273301.1| conserved hypothetical protein [Streptomyces sp. ACTE] gi|282560732|gb|EFB66278.1| conserved hypothetical protein [Streptomyces sp. ACTE] Length = 233 Score = 38.4 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 45/164 (27%), Gaps = 56/164 (34%) Query: 65 IWKRNVDAEYVLLKEYKICAWSGTF--GPKIETGDEQAPEGFYYIGW------------- 109 IW +V SG G G P G Y + + Sbjct: 57 IWWERRHGRWVEADRAPARFGSGGLTEGATRVQGTNTTPTGLYGLPYAFGTRPAPAGTRS 116 Query: 110 --NNLNPNS-----------------------------------KYFLSINIGFPNEFDK 132 +N S +Y ++ IGF N Sbjct: 117 PYRLVNDRSWWCQDNGSAAYNRWVEPLPADCRAQESEHLASYATQYARALVIGF-NYRRP 175 Query: 133 AHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIVRDSLRGN 174 R GA + +H G+ A+AGC ++ M I A + R + Sbjct: 176 VRGR-GAGIFLHVNGKGATAGCVSVPGAAMDRILAWADPARRPH 218 >gi|92119372|ref|YP_579101.1| hypothetical protein Nham_3965 [Nitrobacter hamburgensis X14] gi|91802266|gb|ABE64641.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family [Nitrobacter hamburgensis X14] Length = 520 Score = 38.4 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 42/158 (26%), Gaps = 32/158 (20%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 NR ++L + + + + + P P + + Sbjct: 19 NRVVVMLAGMAALIAPISDATAKQARRAQPAETTAPRE-------AGEPIMAIVSLKSQQ 71 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 + + I + G K P G + I + + +S + Sbjct: 72 VTFYDAEGW----------ILRAPVSTGIKERE----TPAGVFAIIEKDKDHHSTMYDDA 117 Query: 123 NIGFPNEFDKAHNRTGADLMIHGEC-----ASAGCYAM 155 + PN N L +HG AS GC M Sbjct: 118 WM--PNMQRITWN----GLALHGGPLPGYAASHGCVRM 149 >gi|91776201|ref|YP_545957.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] gi|91710188|gb|ABE50116.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT] Length = 160 Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 8/37 (21%) Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 + IHG S GC M N ++E++ +V Sbjct: 114 YIYIHGTPECEPMGEAHSHGCIRMRNADVRELFDLVP 150 >gi|302391951|ref|YP_003827771.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM 5501] gi|302204028|gb|ADL12706.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM 5501] Length = 312 Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 33/130 (25%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 +P + I + + ++ E+ + + ++P G + Sbjct: 122 APEGEVFLLIDTYKKKMTVYSDG-----EPYHEFPVAVGKPST---------KSPIGEWA 167 Query: 107 IGWNNLNPNSKYF-LSINIGFPNEFDKAHNRTGADLMIHGECA--------SAGCYAMNN 157 I + + + + + P G IHG S GC M N Sbjct: 168 IIAKDAHWGGGFGVRWMRLNVP------WGIFG----IHGTNKPGSIGTAASHGCIRMYN 217 Query: 158 KQMQEIYAIV 167 + ++ +Y+ V Sbjct: 218 RHVKILYSWV 227 >gi|254425312|ref|ZP_05039030.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335] gi|196192801|gb|EDX87765.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335] Length = 189 Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 33/181 (18%) Query: 4 RYNILLFALFIFLNGCHH--SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R +LL A + + + ++ + ++ K + V+ I ++ Sbjct: 15 RVAVLLCASVFWGSAALPGRADQTSHGSDTLRTYSITRPEVVKALLANNRIVLSI--SDR 72 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKYF 119 + ++ N L+ Y + + P P G + + +NP S + Sbjct: 73 RVYLFDGN-----ELVNSYPVAVGT-PETP--------TPIGEFAVTQLVVNPVWQSPWT 118 Query: 120 LSINIGFPN-----EFDKAHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAI 166 + PN + + + HG AS GC M+N + E+++ Sbjct: 119 GEVRSPGPNSALGLRWIGFTSNSEGSFGFHGTPTVESIGHAASNGCVRMHNADVIELFSQ 178 Query: 167 V 167 V Sbjct: 179 V 179 >gi|326562620|gb|EGE12931.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 46P47B1] Length = 356 Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 43/141 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + + IL + + L+ Y P G Y I Sbjct: 229 VVADRKDKILYAYHED-----QLVATYPTTVGGEAS---------TTPGGKYKIINKVKM 274 Query: 114 PNSK------------YFLSINIGFPN-EFDKAH---NRTGADLMIHGEC--------AS 149 P K Y+L PN N+ + HG +S Sbjct: 275 PTYKATVNRDDEDNKVYYLPPG---PNSPVGVVWMGLNKPSYGI--HGSPIPEGISRQSS 329 Query: 150 AGCYAMNNKQMQEIYAIVRDS 170 GC + N + E+ A++ + Sbjct: 330 LGCIRLTNWDVLELVAVIENG 350 >gi|326560456|gb|EGE10838.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 7169] gi|326561659|gb|EGE11996.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 103P14B1] gi|326564212|gb|EGE14448.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 12P80B1] gi|326565811|gb|EGE15973.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis BC1] gi|326570464|gb|EGE20504.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis BC8] gi|326571148|gb|EGE21172.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis BC7] gi|326573440|gb|EGE23408.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 101P30B1] gi|326575663|gb|EGE25586.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis CO72] gi|326577128|gb|EGE27022.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis O35E] Length = 353 Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 43/141 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + + IL + + L+ Y P G Y I Sbjct: 226 VVADRKDKILYAYHED-----QLVATYPTTVGGEAS---------TTPGGKYKIINKVKM 271 Query: 114 PNSK------------YFLSINIGFPN-EFDKAH---NRTGADLMIHGEC--------AS 149 P K Y+L PN N+ + HG +S Sbjct: 272 PTYKATVNRDDEDNKVYYLPPG---PNSPVGVVWMGLNKPSYGI--HGSPIPEGISRQSS 326 Query: 150 AGCYAMNNKQMQEIYAIVRDS 170 GC + N + E+ A++ + Sbjct: 327 LGCIRLTNWDVLELVAVIENG 347 >gi|296113079|ref|YP_003627017.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis RH4] gi|295920774|gb|ADG61125.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis RH4] Length = 343 Score = 38.0 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 43/141 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 + + + IL + + L+ Y P G Y I Sbjct: 216 VVADRKDKILYAYHED-----QLVATYPTTVGGEAS---------TTPGGKYKIINKVKM 261 Query: 114 PNSK------------YFLSINIGFPN-EFDKAH---NRTGADLMIHGEC--------AS 149 P K Y+L PN N+ + HG +S Sbjct: 262 PTYKATVNRDDEDNKVYYLPPG---PNSPVGVVWMGLNKPSYGI--HGSPIPEGISRQSS 316 Query: 150 AGCYAMNNKQMQEIYAIVRDS 170 GC + N + E+ A++ + Sbjct: 317 LGCIRLTNWDVLELVAVIENG 337 >gi|90421066|ref|ZP_01228969.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90334701|gb|EAS48478.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 215 Score = 38.0 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 5/54 (9%) Query: 128 NEFDKAHNRTGADLMIH----GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 N + R G+ + +H G + GC A+ M + +R R +Q Sbjct: 163 NIRQRGRGR-GSAIFLHVAKPGYPPTQGCVAVAPADMLRLAPYLRRGARLVVQR 215 >gi|118589214|ref|ZP_01546620.1| hypothetical protein SIAM614_06713 [Stappia aggregata IAM 12614] gi|118437914|gb|EAV44549.1| hypothetical protein SIAM614_06713 [Stappia aggregata IAM 12614] Length = 404 Score = 38.0 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 48/180 (26%) Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 L A I + + + E ++ P + + ++ Sbjct: 10 KRSLLNLTGAAVISVAAMSSAFARDAAPETDVASE-------------PPLHMLVSLDDQ 56 Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLS 121 +++++ L++ I SG G P G + I S Sbjct: 57 KIKVYRG-----LDLIEVSSIS--SGKRGH-------STPTGVFSILEKKRKHFS----- 97 Query: 122 INIGFPNEFDKA-----HNRTGADLMIH-----GECASAGCYAMNNKQMQEIYAIVRDSL 171 N +D A T + + +H G AS GC + Q +Y++ + Sbjct: 98 ------NLYDDAPMPFMQRLTWSGIALHVGRLPGYPASHGCIRLPKAFAQSLYSMTERGM 151 >gi|328543217|ref|YP_004303326.1| ErfK/YbiS/YcfS/YnhG superfamily [polymorphum gilvum SL003B-26A1] gi|326412963|gb|ADZ70026.1| ErfK/YbiS/YcfS/YnhG superfamily [Polymorphum gilvum SL003B-26A1] Length = 173 Score = 38.0 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 45/180 (25%), Gaps = 41/180 (22%) Query: 9 LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKR 68 +F F+ L S + + F P + I +E L + Sbjct: 4 VFGRFLALLAVAGSMGFGGPHVQAAP-----DLVAFKDPRFRPGTVVIKNSERRLYL-VL 57 Query: 69 NVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 Y + ++ Q YI + P + FP+ Sbjct: 58 GRGQALR----YPVAVGQRG-----KSWTGQT-----YIDGKYVKPAWSPPAVVKRDFPD 103 Query: 129 EFDKAHN-------------RTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 D G D IHG S GC M N + +++ V Sbjct: 104 LPDVIAGGAPNNPMGVAALTLAGDDYAIHGTNRPGSIGRAVSYGCIRMRNGDILDLFNRV 163 >gi|253701884|ref|YP_003023073.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21] gi|251776734|gb|ACT19315.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21] Length = 307 Score = 38.0 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 32/134 (23%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + E L ++ + + + G + P G Y + N Sbjct: 111 IVVNLPEYRLYLFSQGKPGG--------VFTFPLGIGDEGAE----TPLGSYTVIQKMTN 158 Query: 114 PNSKYFLSINIGFP-----------NEFDKAHNR-TGADLMIHGEC--------ASAGCY 153 P+ SI P N R + +++IHG +S GC Sbjct: 159 PSWHVPDSIRHEVPELPQIVPPGPSNPLGTHALRLSRGNILIHGTNRPWGIGRRSSHGCL 218 Query: 154 AMNNKQMQEIYAIV 167 + + + ++ + Sbjct: 219 RLYPEDITTLFELA 232 >gi|118588870|ref|ZP_01546278.1| hypothetical protein SIAM614_19229 [Stappia aggregata IAM 12614] gi|118438856|gb|EAV45489.1| hypothetical protein SIAM614_19229 [Stappia aggregata IAM 12614] Length = 152 Score = 38.0 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 29/136 (21%) Query: 41 MQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA 100 + S +I +E L ++ L ++ + + Sbjct: 25 LSAVGASAAPRVTAKIDLSEQQLYLYVDG-----RLRNKWPVSTARKG---------YRT 70 Query: 101 PEGFYYIGWNNLNPNSK--------YFLSINIGFPNEFDKAHNRTGADLMIHGECASAGC 152 P G + + +S+ Y + G+ H T DL G AS GC Sbjct: 71 PTGSWRPTRLERDWHSRKYNWAPMPYSIFFLGGY-----AIHGTT--DLKRLGRPASHGC 123 Query: 153 YAMNNKQMQEIYAIVR 168 ++ K +Y +VR Sbjct: 124 VRLHPKNAAHLYNLVR 139 >gi|298291066|ref|YP_003693005.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506] gi|296927577|gb|ADH88386.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506] Length = 222 Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 46/157 (29%), Gaps = 29/157 (18%) Query: 21 HSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEY 80 + A P I+ + V +I + +E+ VD + Sbjct: 75 PQDAATQSALMPAGIAPIVVPLPEPVVIPRSIVAQINLSRQRMEV---TVDGVPRY--SW 129 Query: 81 KICAWSGTFGPKIETGDEQAPEGFY--------YIGWNNLNPNSKYFLSINIGFPNEFDK 132 I + P G Y Y N Y + N G+ Sbjct: 130 PISTARRG---------YRTPVGSYRPQRMYRRYFSRKYDNAPMPYSIFFNGGY-----A 175 Query: 133 AHNRTGADLMIHGECASAGCYAMNNKQMQEIYAIVRD 169 H T DL G AS GC ++ ++A+V++ Sbjct: 176 IHGTT--DLKRLGRPASHGCVRLHPSNAATLFALVKE 210 >gi|94497433|ref|ZP_01304003.1| hypothetical protein SKA58_07760 [Sphingomonas sp. SKA58] gi|94423064|gb|EAT08095.1| hypothetical protein SKA58_07760 [Sphingomonas sp. SKA58] Length = 220 Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 P + I + + +++ + L+ + G G + P G Y I Sbjct: 49 DGPLYMVISIEKQRVHVYRGD-----RLIGAASVST--GMKGH-------RTPTGDYPIL 94 Query: 109 WNNLNPNSKYFLSINIGFPNE--FDKAHNRTGADLMIHGECASAGCYAMNNKQMQEIYAI 166 S + + + F +D G + G AS GC + ++++A+ Sbjct: 95 QKRQWHRSNLYSNAPMPFMQRLTWDGIALHAGHN---PGYPASHGCIRLPYAFARQLFAL 151 Query: 167 VR 168 R Sbjct: 152 TR 153 >gi|220925047|ref|YP_002500349.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS 2060] gi|219949654|gb|ACL60046.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS 2060] Length = 215 Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 47/170 (27%), Gaps = 38/170 (22%) Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81 + S P+ L+ K P I + +E L + Y Sbjct: 60 AGSTDQAQVAPIPRELVPFGNKYG-----PGTIVVSTSERRLY-YVLGDGMAIR----YG 109 Query: 82 ICAWSGTF---GPKI----ETGDEQAPEGFYYIGWNNL---NPNSKYFLSINIGFPNEFD 131 + F G K P + P+ +++ I N Sbjct: 110 VGVGRPGFTWSGTKRVVAKREWPSWTP-------PKEMLARRPDLPRYMAGGID--NPLG 160 Query: 132 KAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLR 172 G L IHG S+GC M N+ + ++Y V+ + Sbjct: 161 ARAMYIGGTLYRIHGSNEPDTIGQAVSSGCIRMTNEDVTDLYDRVKVGTK 210 >gi|108797377|ref|YP_637574.1| hypothetical protein Mmcs_0397 [Mycobacterium sp. MCS] gi|119866461|ref|YP_936413.1| hypothetical protein Mkms_0406 [Mycobacterium sp. KMS] gi|108767796|gb|ABG06518.1| putative conserved exported protein [Mycobacterium sp. MCS] gi|119692550|gb|ABL89623.1| putative conserved exported protein [Mycobacterium sp. KMS] Length = 217 Score = 38.0 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 22/219 (10%), Positives = 49/219 (22%), Gaps = 61/219 (27%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 R LL A + L + Sbjct: 2 RRLLTLLCAAAVCLVAGAPVAPATAPWFASSVGAATQVISVVGVGGSS----------AK 51 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNN----------- 111 +++++R + + P+ G+ + P G + + + Sbjct: 52 MDVYQRTAVGWQPVAAGIPAFIGAKGMAPQTHDGEMKTPMGVFTLDFAFGTEPNPGGGLP 111 Query: 112 -------------------------LNPNSKYFLSI-----NIGFPNEFDKA-----HNR 136 ++ S+ N+ P R Sbjct: 112 YVQVGPDHWWDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYRHAVVMGVNKAR 171 Query: 137 ---TGADLMIHGECA--SAGCYAMNNKQMQEIYAIVRDS 170 G +H +AGC A+++ + E+ +R Sbjct: 172 VPGNGGAFFVHSTDGGPTAGCVAIDDGTLVEVMRWLRSG 210 >gi|325292655|ref|YP_004278519.1| hypothetical protein AGROH133_05714 [Agrobacterium sp. H13-3] gi|325060508|gb|ADY64199.1| hypothetical protein AGROH133_05714 [Agrobacterium sp. H13-3] Length = 412 Score = 38.0 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 25/112 (22%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I + K++ L +++ ++ K+ G G + P G + I Sbjct: 26 NKSLQIVVSKSDQSLALYENG-----EIVATSKVST--GKAGH-------ETPSGIFSIL 71 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAM 155 S + + + F T + + +H AS GC + Sbjct: 72 EKRKYHESNIYSAAPMPF------MQRLTWSGIALHEGKVPNYPASHGCVRL 117 >gi|328541781|ref|YP_004301890.1| hypothetical protein [polymorphum gilvum SL003B-26A1] gi|326411533|gb|ADZ68596.1| Hypothetical Cytosolic Protein [Polymorphum gilvum SL003B-26A1] Length = 183 Score = 38.0 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH----GECASAGCYAMNNKQMQEIYA 165 + Y + + + + N F R G+ L H G + GC A+ + M+ I A Sbjct: 114 RMWRDDPLYDIVVVLDY-NLFPAVRGR-GSALFFHIARPGYTPTEGCVAVTPRDMRLILA 171 Query: 166 IVR 168 VR Sbjct: 172 RVR 174 >gi|207721999|ref|YP_002252437.1| hypothetical protein RSMK02318 [Ralstonia solanacearum MolK2] gi|206587172|emb|CAQ17756.1| hypothetical protein RSMK02318 [Ralstonia solanacearum MolK2] Length = 129 Score = 38.0 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 17/99 (17%) Query: 101 PEGFYYIGWNNLNPNSKY------FLSINIGF-----PNEFDKAHNRTGADLMIHGE--C 147 PEG Y+I + L N+ + + + P + + R G +HG Sbjct: 32 PEGDYWIQPSQLWENNWFKSLVRTPRASWGNYRLTIHPYPGTQTYGRGGF--FLHGGTVP 89 Query: 148 ASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQA-FP 185 SAGC + QM + ++ +L G + ++Q+ +P Sbjct: 90 GSAGCIDLV-GQMDRFVSRLKQALGGLPECYVQLYVRYP 127 >gi|260889151|ref|ZP_05900414.1| anti sigma factor FlgM [Leptotrichia hofstadii F0254] gi|260861211|gb|EEX75711.1| anti sigma factor FlgM [Leptotrichia hofstadii F0254] Length = 213 Score = 37.6 bits (86), Expect = 1.3, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 2/81 (2%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M +L+ FI L C + + K + L + + + + + K + Sbjct: 1 MKKVKAMLILIAFIGLLSCGGNSADDLKKDEKLLKETMQKCSTGKLKLNDKNCVNVKKVQ 60 Query: 61 NIL--EIWKRNVDAEYVLLKE 79 + E+W +N +KE Sbjct: 61 AEMAKEVWDKNKAEIEAKVKE 81 >gi|197303997|ref|ZP_03169029.1| hypothetical protein RUMLAC_02734 [Ruminococcus lactaris ATCC 29176] gi|197296965|gb|EDY31533.1| hypothetical protein RUMLAC_02734 [Ruminococcus lactaris ATCC 29176] Length = 495 Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 25/91 (27%) Query: 98 EQAPEGFYYIGWNN--------LNPNSKYFLSINIGFPNEF-----------DKAHNRT- 137 Q PEG Y I L P+ Y + + + D RT Sbjct: 401 RQTPEGVYTILERMRNKTLRGALKPDGTYEYETPVDY---WMRVTYSGVGFHDATWQRTF 457 Query: 138 GADLMIHGECASAGCYAMNNKQMQEIYAIVR 168 G D+ + S GC M+ ++Y +++ Sbjct: 458 GGDVYTYRG--SHGCINMSYSDAGQLYDLIQ 486 >gi|148251944|ref|YP_001236529.1| hypothetical protein BBta_0331 [Bradyrhizobium sp. BTAi1] gi|146404117|gb|ABQ32623.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 178 Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 34/139 (24%), Gaps = 36/139 (25%) Query: 50 HPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGW 109 P I + E L + +D + + Y + I Sbjct: 45 SPGTIVVKTGERKLYL---VLDGRHAM--RYPVGVGKAG-----RQWAGTT-----KIDG 89 Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRT-------------GADLMIHGECA-------- 148 P + PN D + G D IHG Sbjct: 90 KYKYPAWAPPAEVKRDKPNLPDVIAGGSPHNPMGVAAMTLAGGDYAIHGTNVPGSVGGFV 149 Query: 149 SAGCYAMNNKQMQEIYAIV 167 S GC M N + ++Y V Sbjct: 150 SYGCIRMLNADITDLYERV 168 >gi|182625387|ref|ZP_02953160.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens D str. JGS1721] gi|177909384|gb|EDT71836.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens D str. JGS1721] Length = 386 Score = 37.6 bits (86), Expect = 1.4, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 48/140 (34%), Gaps = 26/140 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + ++ + E ++ ++ L K + G ++ P G Sbjct: 257 DITSNTNYLVFVNIAEQKTYVY-EGSKNDWTLDKTFTCSTG--------IEG-KETPVGV 306 Query: 105 YYIGWNNLNPNS-------KYFLSINIGF-----PNEFDKAHNRTGADLMIHGECASAGC 152 + + S KY++ + P + D+ T +D + G +S GC Sbjct: 307 FTVQNRAPWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDRT---TVSDPTL-GVPSSHGC 362 Query: 153 YAMNNKQMQEIYAIVRDSLR 172 ++ + + +Y V++ + Sbjct: 363 IRLSVEDSKWLYDNVQNGSK 382 >gi|296284075|ref|ZP_06862073.1| hypothetical protein CbatJ_10641 [Citromicrobium bathyomarinum JL354] Length = 372 Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 25/126 (19%) Query: 48 PFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 +I I K + ++K VL + G G P G + I Sbjct: 93 LKSGVLIVISKPSQTMYVFKDG-----VLWNSSPVST--GKRGH-------TTPSGMFPI 138 Query: 108 GWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAMNNKQMQE 162 S + + + + T + IH G AS GC + + Sbjct: 139 LQKRTFHRSNIYSNAPM---PHMQRL---TWGGIAIHAGKLPGYPASHGCIRLPADFARA 192 Query: 163 IYAIVR 168 ++A+ R Sbjct: 193 LFALTR 198 >gi|90425734|ref|YP_534104.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18] gi|90107748|gb|ABD89785.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18] Length = 191 Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 46/172 (26%), Gaps = 44/172 (25%) Query: 15 FLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEY 74 G + +P+ + + P I I E L + + A Sbjct: 29 GFMGFGPNFFGGASDANPIPRTTVNFASN-----YAPGTIYIDTAERRLYLILQGGQAL- 82 Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP-------------NSKYFLS 121 Y I G G + I P + ++ Sbjct: 83 ----RYGIGVGRDG----FRWG------GVHRITAKKEWPSWTPPSQMLRRRPDLPRHMA 128 Query: 122 INIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIY 164 I N G+ L IHG S+GC+ M N+ +Q++Y Sbjct: 129 GGID--NPLGARAMYLGSTLYRIHGSNEPETIGQAVSSGCFRMTNEDVQDLY 178 >gi|325918288|ref|ZP_08180428.1| hypothetical protein XVE_4454 [Xanthomonas vesicatoria ATCC 35937] gi|325535494|gb|EGD07350.1| hypothetical protein XVE_4454 [Xanthomonas vesicatoria ATCC 35937] Length = 349 Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 44/160 (27%), Gaps = 26/160 (16%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKR-------TSPFHPTVIR 55 R + L G A + + + K + + P + Sbjct: 1 MRRFLSFALCCTLLIGGQALAVPFWGARQSSPADTLPTQLKPGEWIWGGVSKGWGPMAVI 60 Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 + E ++ + L+ I SG G + P G + I + + Sbjct: 61 VSLTEQRAYAYRNGI-----LIGVSTIS--SGKPGH-------ETPTGVFTILQKDKDHR 106 Query: 116 SKYFLSINIGFPNE--FDKAHNRTGADLMIHGECASAGCY 153 S + + + + +D G + G S GC Sbjct: 107 SNIYNAAPMPYQQRLTWDGVALHAGG---LPGYPESHGCV 143 >gi|167041966|gb|ABZ06703.1| putative ErfK/YbiS/YcfS/YnhG [uncultured marine microorganism HF4000_141E02] Length = 313 Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 43/151 (28%) Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI 122 L ++ + L+ + + D P G + NP LS+ Sbjct: 108 LAEYRGFFANDEELI-TFPVGIGRM---------DWTTPLGISKVDLKLENPAWYPPLSV 157 Query: 123 NIGF-----------PNEFDKAHNR-------TGADLMIHGECA--------SAGCYAMN 156 + P D + G IHG S GC + Sbjct: 158 RQEYQEEGIYLAPVIPAGPDNPLGKLAMRLDIPGGY-FIHGTNKPDGVGMQVSHGCIRLF 216 Query: 157 NKQMQEIYAIVRDSLRGNMQSHIQIQAFPFR 187 + ++ I+++ L+ ++I PF+ Sbjct: 217 PEDIRLIFSLTDIGLQ------VKIINEPFK 241 >gi|78185249|ref|YP_377684.1| hypothetical protein Syncc9902_1682 [Synechococcus sp. CC9902] gi|78169543|gb|ABB26640.1| conserved hypothetical protein [Synechococcus sp. CC9902] Length = 163 Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 32/98 (32%) Query: 96 GDEQAP--EGFYYIGWNNLNP-----------NSKYFLSINIGFPNEFDKAHN--RTG-A 139 GD + P +G + I ++P S IG D+ R G Sbjct: 62 GDPKTPTPQGEFSILTKKIDPIYVSKKSGQRKELSGPTS-PIG-----DRYLAFHRNGRG 115 Query: 140 DLMIHGECA----------SAGCYAMNNKQMQEIYAIV 167 + IHG S GC M N +++++ +V Sbjct: 116 EFGIHGTPWPHWVKTRAAVSLGCVRMLNVHVRQLFDLV 153 >gi|188996949|ref|YP_001931200.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932016|gb|ACD66646.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 464 Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 50/160 (31%), Gaps = 34/160 (21%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 + + L + K I I+ E L + D YV+ Y I + Sbjct: 257 RKNQIVVVPLKRILPVKDFKYGM-IYINIY--EKRLYYPIKINDESYVI--TYPIGIGAD 311 Query: 88 TFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSI-------NIGFPNEFDKAHN----R 136 Q+P G + I +P SI FP D R Sbjct: 312 EA---------QSPIGEFKISQKRKDPAWYPPESIRKEQPDLPPVFPPGPDNPLGTRAMR 362 Query: 137 TGA-DLMIHGECA--------SAGCYAMNNKQMQEIYAIV 167 G ++HG S GC M N+ +++++ +V Sbjct: 363 LGNTSFLMHGTNKEYGIGMKVSHGCIRMYNEDVEKLFEVV 402 >gi|188992379|ref|YP_001904389.1| hypothetical protein xccb100_2984 [Xanthomonas campestris pv. campestris str. B100] gi|167734139|emb|CAP52347.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 351 Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 41/145 (28%), Gaps = 22/145 (15%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 A + G S + I K + P + + E ++ + Sbjct: 21 AAAVPFWGARQSSPAETPPDQLKPGEWIWGGVSKG---WGPMAVIVSLTEQRAYAYRNGI 77 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE- 129 L+ I SG G + P G + I + + S + + + + Sbjct: 78 -----LIGVSTIS--SGKPGH-------ETPTGVFTILQKDKDHRSSIYNAAPMPYQQRL 123 Query: 130 -FDKAHNRTGADLMIHGECASAGCY 153 +D G + G S GC Sbjct: 124 TWDGVALHAGG---LPGYPESHGCV 145 >gi|21230771|ref|NP_636688.1| hypothetical protein XCC1314 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769231|ref|YP_243993.1| hypothetical protein XC_2925 [Xanthomonas campestris pv. campestris str. 8004] gi|21112368|gb|AAM40612.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574563|gb|AAY49973.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 351 Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 41/145 (28%), Gaps = 22/145 (15%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 A + G S + I K + P + + E ++ + Sbjct: 21 AAAVPFWGARQSSPAETPPDQLKPGEWIWGGVSKG---WGPMAVIVSLTEQRAYAYRNGI 77 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNE- 129 L+ I SG G + P G + I + + S + + + + Sbjct: 78 -----LIGVSTIS--SGKPGH-------ETPTGVFTILQKDKDHRSSIYNAAPMPYQQRL 123 Query: 130 -FDKAHNRTGADLMIHGECASAGCY 153 +D G + G S GC Sbjct: 124 TWDGVALHAGG---LPGYPESHGCV 145 >gi|110799840|ref|YP_694497.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens ATCC 13124] gi|168210479|ref|ZP_02636104.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens B str. ATCC 3626] gi|110674487|gb|ABG83474.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens ATCC 13124] gi|170711445|gb|EDT23627.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens B str. ATCC 3626] Length = 386 Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 48/140 (34%), Gaps = 26/140 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + ++ + E ++ ++ L K + G ++ P G Sbjct: 257 DITSNTNYLVFVNIAEQKTYVY-EGSKNDWTLDKTFTCSTG--------IEG-KETPVGV 306 Query: 105 YYIGWNNLNPNS-------KYFLSINIGF-----PNEFDKAHNRTGADLMIHGECASAGC 152 + + S KY++ + P + D+ T +D + G +S GC Sbjct: 307 FTVQNRAPWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDRT---TVSDPTL-GVPSSHGC 362 Query: 153 YAMNNKQMQEIYAIVRDSLR 172 ++ + + +Y V++ + Sbjct: 363 IRLSVEDSKWLYDNVQNGSK 382 >gi|75677198|ref|YP_319619.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] gi|74422068|gb|ABA06267.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255] Length = 187 Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 53/184 (28%), Gaps = 24/184 (13%) Query: 1 MTNRYNILLFALFIF-----LNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIR 55 MT +L+ F+F L + ++ S + I S + P + Sbjct: 1 MTRVLALLIATAFVFSAKPALAQFLDTGDFMNFGSGYTSASPIPRQLVYFQSRYAPGTVV 60 Query: 56 IFKNENILEI-WKRNVDAEYVLLKEYKICAWSG--TFGPKIETGDEQAPEGFYYIGWNNL 112 I E L + Y + WSG K + P L Sbjct: 61 IRTGERRLYLVLPGGQALRYGIGVGRDGFRWSGVHRISAK-KEWPSWTP------PAQML 113 Query: 113 NPNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEI 163 + G N G+ L IHG S+GC+ M N + ++ Sbjct: 114 RRRPDLPRFMRGGLENPLGARAMYLGSTLYRIHGSNEPETIGQAVSSGCFRMTNDDVVDL 173 Query: 164 YAIV 167 Y V Sbjct: 174 YNRV 177 >gi|84683513|ref|ZP_01011416.1| hypothetical protein 1099457000264_RB2654_19108 [Maritimibacter alkaliphilus HTCC2654] gi|84668256|gb|EAQ14723.1| hypothetical protein RB2654_19108 [Rhodobacterales bacterium HTCC2654] Length = 150 Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 60/162 (37%), Gaps = 20/162 (12%) Query: 22 SRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYK 81 + ++ P S + S + V+R+ +E + + + + Y Sbjct: 7 AATIFSTTTAPASAEEVFSSSNRA---KQRIVVRVDVSEQRMTVIQGGQ-------RLYD 56 Query: 82 ICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGAD- 140 + G + P G + + + N S + + + +D + G D Sbjct: 57 WDVSTARVG-------KYTPRGTFQPQFFSPNHRSSKYGGAPMPWSVFYDGDYAIHGTDA 109 Query: 141 LMIHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 + G ASAGC ++ + +YA++ ++ G ++ I +Q Sbjct: 110 ISRLGAPASAGCVRLHPDNAKLLYAMIFEA--GKAETFIVVQ 149 >gi|171912140|ref|ZP_02927610.1| hypothetical protein VspiD_13210 [Verrucomicrobium spinosum DSM 4136] Length = 362 Score = 37.6 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 12/75 (16%) Query: 99 QAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCY 153 + P G Y I + S + + + + F + + + + +H G AS GC Sbjct: 286 RTPAGRYVITNKYKDWTSTIYK-VPMPY---FMRLNC---SSIGLHSGYVTGRPASHGCI 338 Query: 154 AMNNKQMQEIYAIVR 168 + + ++++ +VR Sbjct: 339 RLPYEIAKKVFGMVR 353 >gi|153008375|ref|YP_001369590.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC 49188] gi|151560263|gb|ABS13761.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC 49188] Length = 488 Score = 37.6 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 42/143 (29%), Gaps = 43/143 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I K + R D L+ Y S D +P G + +N Sbjct: 356 IIADKGRKQV----RGYDEAGKLVVAYPSTIGSS---------DNPSPSGVVQVERIAIN 402 Query: 114 PNSKYFLSINIGF--------------PN----EFDKAHNRTGADLMIHGEC-------- 147 PN Y + I F PN A ++ + HG Sbjct: 403 PNYTY--NPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKPTYGI--HGTPEPSRIGKT 458 Query: 148 ASAGCYAMNNKQMQEIYAIVRDS 170 +S GC + N +E+ +V+ Sbjct: 459 SSHGCVRLTNWDAEELAKLVKAG 481 >gi|90423674|ref|YP_532044.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18] gi|90105688|gb|ABD87725.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18] Length = 236 Score = 37.6 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 46/215 (21%), Gaps = 65/215 (30%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKA----------EHPLSENLIISMQKKR------- 45 RY L L I + + P+ + + Sbjct: 14 RRYLASLAVLTIGVVAFAGPAQAAPLPLFPFLPLPMLQQPMPPAPQAQIAPQDDDAVVRS 73 Query: 46 -------------TSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 T+ I I L + N A Y I Sbjct: 74 ELPARLKRQVVNYTTREAQGTIVIDTANTYLYLVLGNGRAM-----RYGIGVGR------ 122 Query: 93 IETGDEQAPEGFYYIGWNNLNPN-----------SKYFLSINIGFPNEFDKAHNRTGADL 141 D G I PN + G N G + Sbjct: 123 ----DGFTWSGVQPITRKAEWPNWTPPAEMIARQPYLPRFMAGGPGNPLGARAMYLGGSI 178 Query: 142 M-IHGEC--------ASAGCYAMNNKQMQEIYAIV 167 IHG S+GC + N + ++Y+ V Sbjct: 179 YRIHGTNAPATIGTRVSSGCIRLTNADVADLYSRV 213 >gi|159028466|emb|CAO89913.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 170 Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 44/127 (34%), Gaps = 29/127 (22%) Query: 59 NENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP--NS 116 E + +++ + +L ++ + G K P G + + NP S Sbjct: 51 KERKVYVYQDS-----KVLAQFAVA-----VGKKGWE----TPTGKFEVRELVRNPVWKS 96 Query: 117 KYFLSINIGFPN-----EFDKAHNRTGADLMIHGECA--------SAGCYAMNNKQMQEI 163 + ++ PN + + + HG A S GC M N+ ++ + Sbjct: 97 PWTGKVSAPGPNSPLGERWIGFWSDGKNSIGFHGTPAENSLGRAASHGCVRMRNRDVKVL 156 Query: 164 YAIVRDS 170 + +VR Sbjct: 157 FDLVRMG 163 >gi|85714009|ref|ZP_01044998.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A] gi|85699135|gb|EAQ37003.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A] Length = 172 Score = 37.2 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 43/190 (22%), Gaps = 52/190 (27%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R +L AL + + + P I + NE Sbjct: 1 MLTRAAAVLAAL-------------WGAGLLAIVPAEARPDMVRYQGDYAPGTIVVRTNE 47 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTF---GPKIETGDEQ-----APEGFYYIGWNNL 112 L + + Y + G G + PE Sbjct: 48 RRLYLII-DSGRALR----YPVGVGKAGKQWTGTARIEGKYRDPAWAPPEDVKRDNPKIA 102 Query: 113 N-------PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC--------ASAGCYAMNN 157 N N ++ + G IHG S GC M N Sbjct: 103 NVIAGGSPANPMGVAAMTLS-----------GGGQYAIHGTNRPGTIGRFVSYGCIRMYN 151 Query: 158 KQMQEIYAIV 167 + ++Y V Sbjct: 152 ADIDDLYRRV 161 >gi|301299512|ref|ZP_07205785.1| ErfK/YbiS/YcfS/YnhG [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852902|gb|EFK80513.1| ErfK/YbiS/YcfS/YnhG [Lactobacillus salivarius ACS-116-V-Col5a] Length = 463 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 13/87 (14%) Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 G+ P G YYI + N + + N + + + T H Sbjct: 369 GNYNTPTGLYYIMYKQTNTTLRGKNADNSAYASPVSRWAPFTLDGCGFHDADWRKNWSST 428 Query: 149 ------SAGCYAMNNKQMQEIYAIVRD 169 S GC + Q+ +IY V Sbjct: 429 AYLTDGSHGCVNVRPAQISQIYDNVEQ 455 >gi|254473519|ref|ZP_05086915.1| protein ybis [Pseudovibrio sp. JE062] gi|211957231|gb|EEA92435.1| protein ybis [Pseudovibrio sp. JE062] Length = 235 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 48/169 (28%), Gaps = 30/169 (17%) Query: 23 RSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKI 82 RS ++ + + + + TS P + I L + + N + Y + Sbjct: 78 RSTSNRYSRRIPKQFLPTTVSYNTS-HAPGTVVIDTTSRYLYLVQANG-----KARRYGV 131 Query: 83 CAWSGTF---G-PK---IETG-DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAH 134 F G K D + P + N N Sbjct: 132 GVGRPGFEWAGVHKVTRKREWPDWRPPA---EMLKRQPNLPRYMPGGPR----NPLGARA 184 Query: 135 NRTGADLM-IHGE--CASAG------CYAMNNKQMQEIYAIVRDSLRGN 174 G+ L IHG + G C M N+ + E+Y +V + Sbjct: 185 LYLGSTLYRIHGSNEPWTIGQAVSSGCIRMRNEDVAELYNMVPVGAKVY 233 >gi|196248476|ref|ZP_03147177.1| conserved hypothetical protein [Geobacillus sp. G11MC16] gi|196212201|gb|EDY06959.1| conserved hypothetical protein [Geobacillus sp. G11MC16] Length = 158 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 35/138 (25%), Gaps = 56/138 (40%) Query: 76 LLKEYKICAWSGTFGPKIETGDEQAPEGFY---------------YIGWNNLNPNSK--- 117 +L ++ G K + GD + P G Y I + Sbjct: 1 MLANIRVVVGKNGIG-KQKEGDGKTPAGVYPLGTAFGTAKKPAGLKIPYRQTTAYDYWVD 59 Query: 118 -------------------------------YFLSINIGFPNEFDKAHNRTGADLMIHGE 146 Y ++ + + N+ + G+ + +H Sbjct: 60 DPTSKDYNRWIYYRGNPHRRWKSFERLTHPLYKYAVVVRY-NDSPIVKGK-GSAIFLHIW 117 Query: 147 CA----SAGCYAMNNKQM 160 + GC AM K + Sbjct: 118 PRPSSYTLGCIAMAEKDL 135 >gi|227891704|ref|ZP_04009509.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus salivarius ATCC 11741] gi|227866507|gb|EEJ73928.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus salivarius ATCC 11741] Length = 463 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 13/87 (14%) Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 G+ P G YYI + N + + N + + + T H Sbjct: 369 GNYNTPTGLYYIMYKQTNTTLRGKNADNSAYASPVSRWAPFTLDGCGFHDADWRKNWSST 428 Query: 149 ------SAGCYAMNNKQMQEIYAIVRD 169 S GC + Q+ +IY V Sbjct: 429 AYLTDGSHGCVNVRPAQISQIYDNVEQ 455 >gi|116492683|ref|YP_804418.1| hypothetical protein PEPE_0918 [Pediococcus pentosaceus ATCC 25745] gi|116102833|gb|ABJ67976.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family [Pediococcus pentosaceus ATCC 25745] Length = 477 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 28/98 (28%), Gaps = 24/98 (24%) Query: 100 APEGFYYIGWNNLNPNSKYF---LSINIGFPNEFDKAHNRTGADLMIHGECA-------- 148 P G Y+I + + + + + D T + IH Sbjct: 382 TPTGAYFIKFKIAPITMRGYEKNGEPYKSYVPQADNL---TDDGIFIHSAPWVQASVFGN 438 Query: 149 --------SAGCYAMNNKQMQEIYA--IVRDSLRGNMQ 176 S GC + K M ++Y V + + Q Sbjct: 439 PSQRYNHGSNGCINVPPKDMVKLYQKTTVDEPVIIYGQ 476 >gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein conserved in bacteria [Magnetospirillum magnetotacticum MS-1] Length = 199 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 50/174 (28%), Gaps = 20/174 (11%) Query: 17 NGCHHSRSLIDKAEHPLSENLIISMQKKRTS-PFHPTVIRIFKNENILEI-WKRNVDAEY 74 N + L + + I + S P P I + E L + Y Sbjct: 33 NAALPADPLQQDPAAAVPQASAIGREIVPYSGPHAPGTIVVSTAERRLYLVLPNGEALRY 92 Query: 75 VLLKEYKICAWSGT--FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 + W GT K E D + P L + G N Sbjct: 93 GVGVGRPGFTWGGTQTITMKREWPDWRPP-------AEMLRRRPDLPRYMKGGIENPLGA 145 Query: 133 AHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G + IHG S+GC M N+ + ++Y V+ R +Q Sbjct: 146 RAMYLGNTIYRIHGSNEPETIGTAVSSGCIRMTNEDVADLYGRVKVGARVIVQR 199 >gi|300786120|ref|YP_003766411.1| hypothetical protein AMED_4234 [Amycolatopsis mediterranei U32] gi|299795634|gb|ADJ46009.1| putative secreted protein [Amycolatopsis mediterranei U32] Length = 166 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 39/168 (23%), Gaps = 28/168 (16%) Query: 1 MTNRYNILLFALFIFLNGCHHSR-SLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKN 59 M + L + C R + P+ + T+P + Sbjct: 1 MRRTGVVTLLGAVLVTAACSAPRTTTPSPIAEPVPLTTTSAPPTTTTAPPPAPPCAVATG 60 Query: 60 -----ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNP 114 L W + A G D+ P G + + W + Sbjct: 61 ACVSLAQRLA-WLLRDGQVVRG----PVPAGFGPP-------DQATPAGSFRVVWKDREH 108 Query: 115 NSKYFLSINIGFPNEFDKAHNRTGADLMIHGEC---ASAGCYAMNNKQ 159 S + PN A + H S GC + + Sbjct: 109 RSGQYG---TDMPNSVFFAAG----GIAFHAGPLDAPSHGCVHLTDAD 149 >gi|300213964|gb|ADJ78380.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus salivarius CECT 5713] Length = 446 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 13/87 (14%) Query: 96 GDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------- 148 G+ P G YYI + N + + N + + + T H Sbjct: 352 GNYNTPTGLYYIMYKQTNTTLRGKNADNSAYASPVSRWAPFTLDGCGFHDADWRKNWSST 411 Query: 149 ------SAGCYAMNNKQMQEIYAIVRD 169 S GC + Q+ +IY V Sbjct: 412 AYLTDGSHGCVNVRPAQISQIYDNVEQ 438 >gi|325293497|ref|YP_004279361.1| hypothetical protein AGROH133_07496 [Agrobacterium sp. H13-3] gi|325061350|gb|ADY65041.1| hypothetical protein AGROH133_07496 [Agrobacterium sp. H13-3] Length = 463 Score = 37.2 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 44/162 (27%), Gaps = 43/162 (26%) Query: 33 LSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPK 92 + +I + I K + + + L+ Y S Sbjct: 310 VPGTIIKVVNPGEPKKGQVARIVAHKGIKQVFAYGEDG----ALIAAYPATIGST----- 360 Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGF--------------PN----EFDKAH 134 D +P G + + LNP Y + I F PN A Sbjct: 361 ----DTPSPSGTHTVERVALNPGYTY--NPKINFRQGQNDKILQIPPGPNGPVGTVWIAL 414 Query: 135 NRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168 ++ + HG S GC + N E+ +VR Sbjct: 415 SKPTYGI--HGTPEPSKIGKTNSHGCIRLTNWDATELAKMVR 454 >gi|259418013|ref|ZP_05741932.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] gi|259346919|gb|EEW58733.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] Length = 166 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 12/38 (31%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 + + G P GD P G + I P+ Sbjct: 18 RRFPCTIGKGGIAPNKREGDGATPVGTHRIVGMLYRPD 55 >gi|301055586|ref|YP_003793797.1| DHH subfamily 1 protein [Bacillus anthracis CI] gi|300377755|gb|ADK06659.1| DHH subfamily 1 protein [Bacillus cereus biovar anthracis str. CI] Length = 247 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 60 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 61 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 110 >gi|228929138|ref|ZP_04092165.1| hypothetical protein bthur0010_38270 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228830428|gb|EEM76038.1| hypothetical protein bthur0010_38270 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 252 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 65 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 66 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 115 >gi|228935410|ref|ZP_04098228.1| hypothetical protein bthur0009_38570 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824162|gb|EEM69976.1| hypothetical protein bthur0009_38570 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 247 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 65 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 66 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 115 >gi|229093150|ref|ZP_04224268.1| hypothetical protein bcere0021_38850 [Bacillus cereus Rock3-42] gi|228690124|gb|EEL43918.1| hypothetical protein bcere0021_38850 [Bacillus cereus Rock3-42] Length = 252 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 65 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 66 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 115 >gi|229186334|ref|ZP_04313499.1| hypothetical protein bcere0004_38790 [Bacillus cereus BGSC 6E1] gi|228597128|gb|EEK54783.1| hypothetical protein bcere0004_38790 [Bacillus cereus BGSC 6E1] Length = 252 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 65 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 66 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 115 >gi|225866074|ref|YP_002751452.1| putative lipoprotein [Bacillus cereus 03BB102] gi|225785944|gb|ACO26161.1| putative lipoprotein [Bacillus cereus 03BB102] Length = 247 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 60 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 61 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 110 >gi|196047188|ref|ZP_03114404.1| putative lipoprotein [Bacillus cereus 03BB108] gi|196021937|gb|EDX60628.1| putative lipoprotein [Bacillus cereus 03BB108] Length = 247 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 60 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 61 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 110 >gi|165871130|ref|ZP_02215780.1| putative lipoprotein [Bacillus anthracis str. A0488] gi|167633513|ref|ZP_02391837.1| putative lipoprotein [Bacillus anthracis str. A0442] gi|167639413|ref|ZP_02397684.1| putative lipoprotein [Bacillus anthracis str. A0193] gi|170687225|ref|ZP_02878443.1| putative lipoprotein [Bacillus anthracis str. A0465] gi|170705881|ref|ZP_02896344.1| putative lipoprotein [Bacillus anthracis str. A0389] gi|177652719|ref|ZP_02935135.1| putative lipoprotein [Bacillus anthracis str. A0174] gi|190565999|ref|ZP_03018918.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I] gi|196034984|ref|ZP_03102391.1| putative lipoprotein [Bacillus cereus W] gi|196038773|ref|ZP_03106081.1| putative lipoprotein [Bacillus cereus NVH0597-99] gi|218905228|ref|YP_002453062.1| putative lipoprotein [Bacillus cereus AH820] gi|227816867|ref|YP_002816876.1| putative lipoprotein [Bacillus anthracis str. CDC 684] gi|229599951|ref|YP_002868389.1| putative lipoprotein [Bacillus anthracis str. A0248] gi|164713049|gb|EDR18576.1| putative lipoprotein [Bacillus anthracis str. A0488] gi|167512472|gb|EDR87847.1| putative lipoprotein [Bacillus anthracis str. A0193] gi|167530919|gb|EDR93606.1| putative lipoprotein [Bacillus anthracis str. A0442] gi|170129421|gb|EDS98285.1| putative lipoprotein [Bacillus anthracis str. A0389] gi|170668842|gb|EDT19587.1| putative lipoprotein [Bacillus anthracis str. A0465] gi|172082054|gb|EDT67122.1| putative lipoprotein [Bacillus anthracis str. A0174] gi|190562918|gb|EDV16884.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I] gi|195992523|gb|EDX56484.1| putative lipoprotein [Bacillus cereus W] gi|196030496|gb|EDX69095.1| putative lipoprotein [Bacillus cereus NVH0597-99] gi|218539216|gb|ACK91614.1| putative lipoprotein [Bacillus cereus AH820] gi|227002856|gb|ACP12599.1| putative lipoprotein [Bacillus anthracis str. CDC 684] gi|229264359|gb|ACQ45996.1| putative lipoprotein [Bacillus anthracis str. A0248] Length = 247 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 60 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 61 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 110 >gi|65321482|ref|ZP_00394441.1| COG0216: Protein chain release factor A [Bacillus anthracis str. A2012] gi|118479291|ref|YP_896442.1| hypothetical protein BALH_3706 [Bacillus thuringiensis str. Al Hakam] gi|228916728|ref|ZP_04080293.1| hypothetical protein bthur0012_39420 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228947808|ref|ZP_04110095.1| hypothetical protein bthur0007_39350 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123611|ref|ZP_04252806.1| hypothetical protein bcere0016_38980 [Bacillus cereus 95/8201] gi|118418516|gb|ABK86935.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|228659746|gb|EEL15391.1| hypothetical protein bcere0016_38980 [Bacillus cereus 95/8201] gi|228811795|gb|EEM58129.1| hypothetical protein bthur0007_39350 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228842915|gb|EEM87998.1| hypothetical protein bthur0012_39420 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 252 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 65 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + E+WK + +L ++K K D G Y+I Sbjct: 66 GKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 115 >gi|114762967|ref|ZP_01442397.1| hypothetical protein 1100011001344_R2601_20846 [Pelagibaca bermudensis HTCC2601] gi|114544291|gb|EAU47299.1| hypothetical protein R2601_20846 [Roseovarius sp. HTCC2601] Length = 320 Score = 37.2 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 50/159 (31%), Gaps = 23/159 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M NR A L+ + + + SP+ P + + +E Sbjct: 1 MLNRRMFAKGAALGGLSLMAGPLAGQHVFKEITALQPGEFTWHPERSPYGPVSVVVSLDE 60 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 + +++ + + + +G G + P G + + + + S + Sbjct: 61 QRVHVYR---NGIRIAVSTCS----TGKPGH-------ETPTGVFVVLQKDRDHRSSTYN 106 Query: 121 SINIGFPN----EFDKAHNRTGADLMIHGECASAGCYAM 155 + + PN +D G + G AS GC + Sbjct: 107 NAPM--PNMNRLTWDGIALHAGN---LPGYPASHGCVRL 140 >gi|159184697|ref|NP_354301.2| hypothetical protein Atu1293 [Agrobacterium tumefaciens str. C58] gi|159139986|gb|AAK87086.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 412 Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 25/107 (23%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + K++ L +++ ++ K+ G G + P G + I Sbjct: 31 ILVSKSDQSLSLYENG-----EIIATSKVST--GKAGH-------ETPSGIFSILEKRKY 76 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIH-----GECASAGCYAM 155 S + + + F T + + +H AS GC + Sbjct: 77 HESNIYSAAPMPF------MQRLTWSGIALHEGKVPNYPASHGCVRL 117 >gi|311067367|ref|YP_003972290.1| aliphatic sulfonate ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] gi|310867884|gb|ADP31359.1| aliphatic sulfonate ABC transporter binding lipoprotein [Bacillus atrophaeus 1942] Length = 327 Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 22/74 (29%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + ILL A+ L GC + K ++ + S+ + F+ E I Sbjct: 2 KKAFILLSAVIFLLAGCGSDGASGKKELKEINIGIQQSLSPLLIAKEKGWFEEAFEKEGI 61 Query: 63 LEIWKRNVDAEYVL 76 W Sbjct: 62 KVKWTEFQSGPPQF 75 >gi|239832941|ref|ZP_04681270.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG 3301] gi|239825208|gb|EEQ96776.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG 3301] Length = 496 Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 43/143 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I K + + D L+ Y S D +P G + +N Sbjct: 364 IIADKGRKQVRGY----DETGKLVVAYPSTIGSS---------DNPSPSGTVQVERIAIN 410 Query: 114 PNSKYFLSINIGF--------------PN----EFDKAHNRTGADLMIHGEC-------- 147 PN Y + I F PN A ++ + HG Sbjct: 411 PNYTY--NPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKPTYGI--HGTPEPSRIGKT 466 Query: 148 ASAGCYAMNNKQMQEIYAIVRDS 170 +S GC + N +E+ +V+ Sbjct: 467 SSHGCVRLTNWDAEELAKLVKAG 489 >gi|333023661|ref|ZP_08451725.1| putative secreted protein [Streptomyces sp. Tu6071] gi|332743513|gb|EGJ73954.1| putative secreted protein [Streptomyces sp. Tu6071] Length = 316 Score = 37.2 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIV 167 + ++Y ++ I + N R GA + +H G A+AGC ++ M I + Sbjct: 248 RLADHPTQYAKALVIDY-NRRPATPGR-GAGIFLHINGAGATAGCVSVPRPTMDRIMTWI 305 Query: 168 RDS 170 + Sbjct: 306 SPA 308 >gi|228987281|ref|ZP_04147402.1| hypothetical protein bthur0001_39530 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229157673|ref|ZP_04285748.1| hypothetical protein bcere0010_38540 [Bacillus cereus ATCC 4342] gi|228625630|gb|EEK82382.1| hypothetical protein bcere0010_38540 [Bacillus cereus ATCC 4342] gi|228772510|gb|EEM20955.1| hypothetical protein bthur0001_39530 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 252 Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 6 MMKKLIVTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 65 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + EIWK + +L ++K K D G Y+I Sbjct: 66 GKEKVTDADDVKFEIWKAGDENHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 115 >gi|222106144|ref|YP_002546935.1| ABC transporter substrate binding protein (iron) [Agrobacterium vitis S4] gi|221737323|gb|ACM38219.1| ABC transporter substrate binding protein (iron) [Agrobacterium vitis S4] Length = 319 Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 12/121 (9%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 + +L+F L FL + + P++ T+P + E + Sbjct: 1 MKNALLIFTLSTFLAAVSLTAATA----EPVTVKSCNRQVTFDTAPQRAVSNDVNLTEMM 56 Query: 63 LEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPE--GFYYIGWNNLNPNSKYFL 120 L + ++ + Y + T K+ G Q PE Y LN N+ ++ Sbjct: 57 LALKLQD------HMVGYTGVSGWKTLDEKLREGVSQLPELSPKYPSKEVLLNANADFYF 110 Query: 121 S 121 + Sbjct: 111 A 111 >gi|18309006|ref|NP_560940.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens str. 13] gi|18143681|dbj|BAB79730.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 386 Score = 37.2 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 48/140 (34%), Gaps = 26/140 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + ++ + E ++ ++ L K + G ++ P G Sbjct: 257 DITSNTNYLVFVNIAEQKTYVY-EGSKNDWTLDKTFTCSTG--------IEG-KETPVGV 306 Query: 105 YYIGWNNLNPNS-------KYFLSINIGF-----PNEFDKAHNRTGADLMIHGECASAGC 152 + + S KY++ + P + DK T +D + G +S GC Sbjct: 307 FTVQNRAPWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDKT---TVSDPTL-GVPSSHGC 362 Query: 153 YAMNNKQMQEIYAIVRDSLR 172 ++ + + +Y V++ + Sbjct: 363 IRLSVEDSKWLYDNVQNGSK 382 >gi|302522636|ref|ZP_07274978.1| secreted protein [Streptomyces sp. SPB78] gi|302431531|gb|EFL03347.1| secreted protein [Streptomyces sp. SPB78] Length = 297 Score = 37.2 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIV 167 + ++Y ++ I + N R GA + +H G A+AGC ++ M I + Sbjct: 229 RLADHPTQYAKALVIDY-NRRPATPGR-GAGIFLHINGAGATAGCVSVPRPTMDRIMTWI 286 Query: 168 RDS 170 + Sbjct: 287 SPA 289 >gi|318061304|ref|ZP_07980025.1| putative secreted protein [Streptomyces sp. SA3_actG] gi|318078073|ref|ZP_07985405.1| putative secreted protein [Streptomyces sp. SA3_actF] Length = 307 Score = 37.2 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIV 167 + ++Y ++ I + N R GA + +H G A+AGC ++ M I + Sbjct: 239 RLADHPTQYAKALVIDY-NRRPATPGR-GAGIFLHINGAGATAGCVSVPRPTMDRIMTWI 296 Query: 168 RDS 170 + Sbjct: 297 SPA 299 >gi|153874337|ref|ZP_02002595.1| ErfK/YbiS/YcfS/YnhG family protein [Beggiatoa sp. PS] gi|152069197|gb|EDN67403.1| ErfK/YbiS/YcfS/YnhG family protein [Beggiatoa sp. PS] Length = 110 Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 8/41 (19%) Query: 140 DLMIHGE--------CASAGCYAMNNKQMQEIYAIVRDSLR 172 + IHG AS GC M N+ + E++ +V + + Sbjct: 63 YIYIHGTAEENKIGQPASHGCIRMYNRDVIELFDLVMEGTK 103 >gi|2440245|dbj|BAA22343.1| outer surface protein B [Borrelia garinii] gi|2440248|dbj|BAA22345.1| outer surface protein B [Borrelia garinii] Length = 268 Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 2/81 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPL--SENLIISMQKKRTSPFHPTVIRIFKNE 60 + +L FAL + L C + + + S+ KK +++F + Sbjct: 1 MKKYLLGFALVLALIACGQKGAEPKHNDQEVEDSKKDQKDASKKDLPLVTEDTVKLFNDT 60 Query: 61 NILEIWKRNVDAEYVLLKEYK 81 I ++N D +Y L Sbjct: 61 KIFISKEKNKDGKYELRATID 81 >gi|226951673|ref|ZP_03822137.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244] gi|294651354|ref|ZP_06728673.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC 19194] gi|226837589|gb|EEH69972.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244] gi|292822756|gb|EFF81640.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC 19194] Length = 176 Score = 36.8 bits (84), Expect = 2.2, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 51/168 (30%), Gaps = 52/168 (30%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I I + L + K N K Y I + G + + P G++ I + Sbjct: 10 ILIDLAQQTLYLPKHN--------KFYVISSGKNGIGE--QENTGKTPRGWHRIAQKIGD 59 Query: 114 PNSK-------------YFLSINIGFPNEFDKAHNR--------TGAD-----------L 141 K Y + FP E D +R G + + Sbjct: 60 DAPKNSVFIARQATGEIYDQDLAQQFP-ERDWILSRILWLDGLQAGFNQGDGCDTFKRYI 118 Query: 142 MIHGECA--------SAGCYAMNNKQMQEIYAIV-RDSLRGNMQSHIQ 180 IHG S GC M N ++ E++ ++ +L + + Sbjct: 119 YIHGTPETEPMGIPMSHGCIRMKNDEVIELFELISEQALVYISEHALD 166 >gi|218133628|ref|ZP_03462432.1| hypothetical protein BACPEC_01497 [Bacteroides pectinophilus ATCC 43243] gi|217991003|gb|EEC57009.1| hypothetical protein BACPEC_01497 [Bacteroides pectinophilus ATCC 43243] Length = 373 Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 15/32 (46%) Query: 188 MTSKNMQLYQNNPNYSFWNMLKLGHDYFEKNH 219 MT + M+ + F LK +D+F++ Sbjct: 1 MTVEGMEGESMSSFEEFCRKLKGAYDFFQRTK 32 >gi|224541355|ref|ZP_03681894.1| hypothetical protein CATMIT_00515 [Catenibacterium mitsuokai DSM 15897] gi|224525689|gb|EEF94794.1| hypothetical protein CATMIT_00515 [Catenibacterium mitsuokai DSM 15897] Length = 94 Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 15/82 (18%) Query: 113 NPNSKYFLSINIGFPNEF--DKAHNRT-------GADLMIHGE--CASAGCYAMNNKQMQ 161 +S L I +P + A N G+ + +H A+AGC ++++ M Sbjct: 16 QWSSAEHL---ISYPTAYRYAIALNYNTACTPGAGSAIFLHCSTGGATAGCISVSSSDMI 72 Query: 162 EIYAIVR-DSLRGNMQSHIQIQ 182 I +++ D+L G Q+ + Sbjct: 73 RILKMIQGDTLIGIYQNKSSLY 94 >gi|222148299|ref|YP_002549256.1| hypothetical protein Avi_1744 [Agrobacterium vitis S4] gi|221735287|gb|ACM36250.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 411 Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 22/124 (17%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I + K L ++ + ++ K+ G G P G + I Sbjct: 31 GSALQIIVSKQTQSLTVYDGD-----RIIASSKVST--GKEGH-------TTPSGIFSII 76 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRTGADL----MIHGECASAGCYAMNNKQMQEIY 164 S + P + + +G L + AS GC + + +E+Y Sbjct: 77 QKTKYHESNLYS----NAPMPWMQRITWSGVALHESNSVPNRPASHGCVRLPGQFARELY 132 Query: 165 AIVR 168 + R Sbjct: 133 GMTR 136 >gi|332995447|gb|AEF05502.1| hypothetical protein ambt_20055 [Alteromonas sp. SN2] Length = 392 Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 14/32 (43%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHP 32 M +Y LL A+ + L C S S E P Sbjct: 1 MNKKYLALLLAMTLGLAACGGSDSSDPAIETP 32 >gi|256424711|ref|YP_003125364.1| hypothetical protein Cpin_5742 [Chitinophaga pinensis DSM 2588] gi|256039619|gb|ACU63163.1| hypothetical protein Cpin_5742 [Chitinophaga pinensis DSM 2588] Length = 420 Score = 36.8 bits (84), Expect = 2.3, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 38/115 (33%), Gaps = 11/115 (9%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRI---- 56 M ++ + + C + + L+ I+ T + + Sbjct: 1 MKRHAYLIALSTSLAFAACTKQSAEPALSTDKLAAANEITAAAASTITYTDESTFVNSLS 60 Query: 57 ---FKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQA----PEGF 104 FK + L + + + Y + + I A + G K +GDEQ P+G Sbjct: 61 SYGFKTPDQLSLNRDGSTSGYTSVYGFNIPAANQVTGFKWNSGDEQTNEWRPQGI 115 >gi|168214034|ref|ZP_02639659.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens CPE str. F4969] gi|170714517|gb|EDT26699.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens CPE str. F4969] Length = 386 Score = 36.8 bits (84), Expect = 2.4, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 48/140 (34%), Gaps = 26/140 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + ++ + E ++ ++ L K + G ++ P G Sbjct: 257 DITSNTNYLVFVNIAEQKTYVY-EGSKNDWTLDKTFTCSTG--------IEG-KETPVGV 306 Query: 105 YYIGWNNLNPNS-------KYFLSINIGF-----PNEFDKAHNRTGADLMIHGECASAGC 152 + + S KY++ + P + DK T +D + G +S GC Sbjct: 307 FTVQNRAPWFFSPKYGQGGKYYVQFMGNYLFHSIPFDSDKT---TISDPTL-GVPSSHGC 362 Query: 153 YAMNNKQMQEIYAIVRDSLR 172 ++ + + +Y V++ + Sbjct: 363 IRLSVEDSKWLYDNVQNGSK 382 >gi|146340345|ref|YP_001205393.1| hypothetical protein BRADO3372 [Bradyrhizobium sp. ORS278] gi|146193151|emb|CAL77163.1| putative ErfK/YbiS/YcfS/YnhG family protein; putative signal peptide [Bradyrhizobium sp. ORS278] Length = 590 Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 23/141 (16%) Query: 19 CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLK 78 +R + + +++K+ P P I + ++ L+I+ N L Sbjct: 47 APPARPVAPRKAKARHGQKPATIEKEAAKPLGPVTIAVSISKQQLKIYDANG-----LFA 101 Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF-LSINIGFPNEFDKAHNRT 137 E + G G P G + + S + + P F + + Sbjct: 102 EAPVST--GMKGH-------ATPMGVFSVIQKQKFHRSNIYSGA-----PMPFMQRITWS 147 Query: 138 GADL---MIHGECASAGCYAM 155 G L ++ G AS GC M Sbjct: 148 GVALHAGVLPGYPASHGCIRM 168 >gi|260684287|ref|YP_003215572.1| cell surface protein [Clostridium difficile CD196] gi|260687946|ref|YP_003219080.1| cell surface protein [Clostridium difficile R20291] gi|260210450|emb|CBA64897.1| cell surface protein [Clostridium difficile CD196] gi|260213963|emb|CBE06051.1| cell surface protein [Clostridium difficile R20291] Length = 653 Score = 36.8 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK 132 L+KE+++ G K P G + N Y +I G P N D+ Sbjct: 59 KLVKEFRVAT-----GKKGSE----TPTGKTKVVNKIKN-RPYYKGNIPGGSPRNPLGDR 108 Query: 133 -----AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G IHG S GC M+NK ++ ++ V Sbjct: 109 WMGLALKGTYGDTYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQVP 157 >gi|149915693|ref|ZP_01904219.1| hypothetical protein RAZWK3B_07047 [Roseobacter sp. AzwK-3b] gi|149810585|gb|EDM70428.1| hypothetical protein RAZWK3B_07047 [Roseobacter sp. AzwK-3b] Length = 167 Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 11/38 (28%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 + Y G GD P G + I P+ Sbjct: 18 RRYPCSIGWGGLSACKREGDGATPVGAHRIVGLLYRPD 55 >gi|75763023|ref|ZP_00742814.1| Hypothetical protein RBTH_02670 [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489485|gb|EAO52910.1| Hypothetical protein RBTH_02670 [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 248 Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + I LF + L GC+ ++ K + + + + K P T ++ Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 61 Query: 58 -KNEN------ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + EIWK + +L ++K K D G Y+I Sbjct: 62 GKEKXTDADDVKFEIWKDGDEKHEMLDGKHKGKGVYAV--EKTFETD-----GVYHI 111 >gi|229109585|ref|ZP_04239174.1| hypothetical protein bcere0018_18490 [Bacillus cereus Rock1-15] gi|228673833|gb|EEL29088.1| hypothetical protein bcere0018_18490 [Bacillus cereus Rock1-15] Length = 266 Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 29/184 (15%) Query: 2 TNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNEN 61 R I+L + L+GC + I+ P + L KK S F + Sbjct: 6 KARMMIVLLIVSSLLSGCGFGETKIE--YEPFVKALDEGDMKKGMSASDDGY--AFVEQR 61 Query: 62 ILE-IWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKY-- 118 + +++ D E+ Y+ K G E + + Y Sbjct: 62 GIYSTYEQKEDGEHRN-TIYQTSEGIYNTKDKSLYG-NTTQEVTSAVDSKDNKEEVVYRT 119 Query: 119 ---FL---------SINIGFPNE-FDKAHN------RTGADLMIHGECASAGCYAMNNKQ 159 + S+++ + N D+ + G D+ G+ ++ G Y + + Sbjct: 120 NIMYKNGQVQSTDSSLDVSYVNLIVDRLKGIGKLKMKPGGDIKKFGQPSTVG-YTLTESE 178 Query: 160 MQEI 163 Q I Sbjct: 179 FQNI 182 >gi|255101881|ref|ZP_05330858.1| cell surface protein [Clostridium difficile QCD-63q42] gi|255307750|ref|ZP_05351921.1| cell surface protein [Clostridium difficile ATCC 43255] Length = 644 Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK 132 L+KE+++ G K P G + N Y +I G P N D+ Sbjct: 50 KLVKEFRVAT-----GKKGSE----TPTGKTKVVNKIKN-RPYYKGNIPGGSPRNPLGDR 99 Query: 133 -----AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G IHG S GC M+NK ++ ++ V Sbjct: 100 WMGLALKGTYGDTYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQVP 148 >gi|254976305|ref|ZP_05272777.1| cell surface protein [Clostridium difficile QCD-66c26] gi|255093691|ref|ZP_05323169.1| cell surface protein [Clostridium difficile CIP 107932] gi|255315441|ref|ZP_05357024.1| cell surface protein [Clostridium difficile QCD-76w55] gi|255518106|ref|ZP_05385782.1| cell surface protein [Clostridium difficile QCD-97b34] gi|255651222|ref|ZP_05398124.1| cell surface protein [Clostridium difficile QCD-37x79] gi|306521068|ref|ZP_07407415.1| cell surface protein [Clostridium difficile QCD-32g58] Length = 644 Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK 132 L+KE+++ G K P G + N Y +I G P N D+ Sbjct: 50 KLVKEFRVAT-----GKKGSE----TPTGKTKVVNKIKN-RPYYKGNIPGGSPRNPLGDR 99 Query: 133 -----AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G IHG S GC M+NK ++ ++ V Sbjct: 100 WMGLALKGTYGDTYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQVP 148 >gi|325475561|gb|EGC78739.1| hypothetical protein HMPREF9353_00142 [Treponema denticola F0402] Length = 382 Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 28/143 (19%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M I + +FL C+ KA+ P E + + + I K + Sbjct: 1 MKTNKLIFILIFGLFLFSCNRENIAETKADLPKPEKMPEQI--IKEEKQSKIKIHQEKID 58 Query: 61 NILE--------IWKRNVDAEYVLLK--------------EYKICAWSGTFGPKIETGDE 98 ++E IW + D + +K + + G K D+ Sbjct: 59 KLIEEIYNKSESIWPYSTDNIFSNMKTVDRFFDKNEIVNITFDVDKKEGEIYYKK--NDK 116 Query: 99 QAPEGFYYIGWNNLNPNSKYFLS 121 + E Y I + ++ Y++S Sbjct: 117 KTLE--YKITYKESQTDNAYYVS 137 >gi|91977288|ref|YP_569947.1| hypothetical protein RPD_2818 [Rhodopseudomonas palustris BisB5] gi|91683744|gb|ABE40046.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5] Length = 536 Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 48/165 (29%), Gaps = 37/165 (22%) Query: 1 MTNRYNIL-----LFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIR 55 MT+R + + AL ++ + + + P+ P + Sbjct: 22 MTDRRFGIAAVATIAALVTWIALTGDALAKRARPAPPVEATAPRE-------AGEPIMAI 74 Query: 56 IFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 + + ++ + +L+ + + + P G + I + Sbjct: 75 VSIKSQQVTLYDADGW----ILRA-PVSTGTSG---------RETPAGVFAILEKRKDHR 120 Query: 116 SKYFLSINIGFPNEFDKAHNRTGADLMIHGEC-----ASAGCYAM 155 S + + PN N + +HG AS GC M Sbjct: 121 SSMYDDAWM--PNMQRITWN----GVALHGGPLPGYAASHGCVRM 159 >gi|329922728|ref|ZP_08278280.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5] gi|328942070|gb|EGG38353.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5] Length = 103 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%) Query: 100 APEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK-------AHNRTGADLMIHGECA-- 148 PEG + I N Y I G P N D+ + RT IHG Sbjct: 10 TPEGLFKIHEKVKN-RPYYKEGIKGGDPRNPLGDRWLGINVKVNGRTSYAYAIHGNNNAN 68 Query: 149 ------SAGCYAMNNKQMQEIYAIVR 168 SAGC M+NK ++ +Y V+ Sbjct: 69 LIGKYVSAGCIRMHNKDVRWLYDKVK 94 >gi|146339031|ref|YP_001204079.1| hypothetical protein BRADO1982 [Bradyrhizobium sp. ORS278] gi|146191837|emb|CAL75842.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 273 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 46/156 (29%), Gaps = 17/156 (10%) Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 + H ++ + L L + + I + K+ + + + Sbjct: 3 ASIMAAAPHPERIMRRHVVILVAALAWLISLE--RAEARLDILVDKSTQRMLVIQNG--- 57 Query: 73 EYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDK 132 Y W + G D P G Y N S + + + + F Sbjct: 58 ----FIRY---MWPVSTG----RDDLATPSGVYTPQRMERNWFSSSYYNSPMPYAIFFHN 106 Query: 133 AHNRTGAD-LMIHGECASAGCYAMNNKQMQEIYAIV 167 + G+ + G AS GC ++ ++ +V Sbjct: 107 GYAIHGSYAIDRLGGPASHGCVRLHPHHAARLFDLV 142 >gi|29833317|ref|NP_827951.1| secreted protein [Streptomyces avermitilis MA-4680] gi|29610439|dbj|BAC74486.1| putative secreted protein [Streptomyces avermitilis MA-4680] Length = 233 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 110 NNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIH--GECASAGCYAMNNKQMQEIYAIV 167 + ++ ++Y + IGF N R GA + +H G A+AGC ++ + M++I Sbjct: 154 HLVSYEAQYAHAFVIGF-NYARPVRGR-GAGIFLHVNGSGATAGCVSVPAEAMRQILTWA 211 Query: 168 R 168 Sbjct: 212 E 212 >gi|126700327|ref|YP_001089224.1| cell surface protein [Clostridium difficile 630] Length = 653 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK 132 L+KE+++ G K P G + N Y +I G P N D+ Sbjct: 59 KLVKEFRVAT-----GKKGSE----TPTGKTKVVNKIKN-RPYYKGNIPGGSPRNPLGDR 108 Query: 133 -----AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G IHG S GC M+NK ++ ++ V Sbjct: 109 WMGLALKGTYGDTYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQVP 157 >gi|2440257|dbj|BAA22351.1| outer surface protein B [Borrelia garinii] gi|2440260|dbj|BAA22353.1| outer surface protein B [Borrelia garinii] gi|2440263|dbj|BAA22355.1| outer surface protein B [Borrelia garinii] Length = 298 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 2/79 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPL--SENLIISMQKKRTSPFHPTVIRIFKNE 60 + +L FAL + L C + + + S+ KK +++F + Sbjct: 1 MKKYLLGFALVLALIACGQKGAEPKHNDQEVEDSKKDQKDASKKDLPLVTEDTVKLFNDT 60 Query: 61 NILEIWKRNVDAEYVLLKE 79 I ++N D +Y L Sbjct: 61 KIFISKEKNKDGKYELRAT 79 >gi|163849538|ref|YP_001637581.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens PA1] gi|163661143|gb|ABY28510.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens PA1] Length = 368 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 43/168 (25%), Gaps = 30/168 (17%) Query: 11 ALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNV 70 A + + + + M K + +I + K + + V Sbjct: 168 APLPTITAPGAANATPAPTQLRPLAAPARDMAKPAAAAPARVLITVDKATQRMRV---TV 224 Query: 71 DAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSK-YFLSINIGFPNE 129 D + + + + P G + S+ + + P Sbjct: 225 DGKLRY--SWAVSTGRAP---------YKTPAGTFRPFRLEKEHYSREWDDA-----PMP 268 Query: 130 FDKAHNRTGADLMIH--------GECASAGCYAMNNKQMQEIYAIVRD 169 + G + H G AS GC + ++ +VR Sbjct: 269 YSIFFTAAGHAI--HASNATRQLGRPASHGCVRLAPSHAAALFTLVRA 314 >gi|296451772|ref|ZP_06893498.1| cell surface protein [Clostridium difficile NAP08] gi|296880100|ref|ZP_06904068.1| cell surface protein [Clostridium difficile NAP07] gi|296259382|gb|EFH06251.1| cell surface protein [Clostridium difficile NAP08] gi|296428914|gb|EFH14793.1| cell surface protein [Clostridium difficile NAP07] Length = 653 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK 132 L+KE+++ G K P G + N Y +I G P N D+ Sbjct: 59 KLVKEFRVAT-----GKKGSE----TPTGKTKVVNKIKN-RPYYKGNIPGGSPRNPLGDR 108 Query: 133 -----AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G IHG S GC M+NK ++ ++ V Sbjct: 109 WMGLALKGTYGDTYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQVP 157 >gi|297563684|ref|YP_003682658.1| peptidoglycan-binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848132|gb|ADH70152.1| Peptidoglycan-binding domain 1 protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 245 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 5/66 (7%) Query: 100 APEGFYYIGWNNLNPNSKYFLSINI-GFPNEFDKAHNRTGADLMIHGECASAGCYAMNNK 158 P G Y + + + ++ + N H ++ + AS GC ++ Sbjct: 170 TPTGTYTVFREVDAWDPGPYGALYRPKYFNGGIAVHGYP----VVPAQPASHGCARVSLA 225 Query: 159 QMQEIY 164 M ++ Sbjct: 226 AMDWLW 231 >gi|170742571|ref|YP_001771226.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46] gi|168196845|gb|ACA18792.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46] Length = 214 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 50/184 (27%), Gaps = 39/184 (21%) Query: 4 RYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENIL 63 R F+ + G + S P+ L+ + P + + E L Sbjct: 42 RPYGAPFSAAPYGRG-QAAGSTDQAQVAPIPRELVPFDG-----RYAPGTVVVSTAERRL 95 Query: 64 EIWKRNVDAEYVLLKEYKICAWSGTF---GPK----IETGDEQAPEGFYYIGWNNL---N 113 + Y + F G K + P + Sbjct: 96 Y-YVLGDGMAIR----YGVGVGRPGFTWSGTKTIVAKKEWPSWTP-------PKEMLARR 143 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIY 164 P+ +++ I N G L IHG S+GC M N + ++Y Sbjct: 144 PDLPRYMAGGID--NPLGARAMYIGGTLYRIHGSNEPDTIGQAVSSGCIRMTNDDVTDLY 201 Query: 165 AIVR 168 V+ Sbjct: 202 ERVK 205 >gi|83950058|ref|ZP_00958791.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM] gi|83837957|gb|EAP77253.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM] Length = 176 Score = 36.8 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 17/24 (70%) Query: 145 GECASAGCYAMNNKQMQEIYAIVR 168 G +S GC + N++++E+YA+V Sbjct: 145 GRRSSDGCIGLYNEKIEELYALVP 168 >gi|229140824|ref|ZP_04269369.1| hypothetical protein bcere0013_39180 [Bacillus cereus BDRD-ST26] gi|229198212|ref|ZP_04324920.1| hypothetical protein bcere0001_37420 [Bacillus cereus m1293] gi|228585231|gb|EEK43341.1| hypothetical protein bcere0001_37420 [Bacillus cereus m1293] gi|228642614|gb|EEK98900.1| hypothetical protein bcere0013_39180 [Bacillus cereus BDRD-ST26] Length = 252 Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 6 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 65 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + EIWK + +L ++K K D G Y+I Sbjct: 66 GKEKVTDADDVKFEIWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 115 >gi|206976247|ref|ZP_03237155.1| conserved hypothetical protein [Bacillus cereus H3081.97] gi|217961582|ref|YP_002340152.1| hypothetical protein BCAH187_A4221 [Bacillus cereus AH187] gi|206745443|gb|EDZ56842.1| conserved hypothetical protein [Bacillus cereus H3081.97] gi|217063458|gb|ACJ77708.1| conserved hypothetical protein [Bacillus cereus AH187] Length = 247 Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + + LF + L GC+ ++ K + + + + K P T ++ Sbjct: 1 MMKKLIMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 60 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + EIWK + +L ++K K D G Y+I Sbjct: 61 GKEKVTDADDVKFEIWKAGDEKHEMLEGKHKGKGVYAV--EKTFETD-----GVYHI 110 >gi|170718605|ref|YP_001783806.1| peptidase M48 Ste24p [Haemophilus somnus 2336] gi|168826734|gb|ACA32105.1| peptidase M48 Ste24p [Haemophilus somnus 2336] Length = 254 Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 7/97 (7%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M+ + I + + LN C S S+ ++ + + + K PT RI K Sbjct: 1 MSIKKIIFVIFTVLLLNACADSSSINQQSASSYVQIIGQAEAKGVVDKSSPTAKRIHKIF 60 Query: 61 NILEIWKRNVDA-------EYVLLKEYKICAWSGTFG 90 + + + + ++K ++ AW+ G Sbjct: 61 KKMHPYADKENNTGQVFTWQLNVIKSKEMNAWAMPEG 97 >gi|328887740|emb|CAJ69599.2| putative cell wall protein [Clostridium difficile] Length = 644 Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK 132 L+KE+++ G K P G + N Y +I G P N D+ Sbjct: 50 KLVKEFRVAT-----GKKGSE----TPTGKTKVVNKIKN-RPYYKGNIPGGSPRNPLGDR 99 Query: 133 -----AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G IHG S GC M+NK ++ ++ V Sbjct: 100 WMGLALKGTYGDTYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQVP 148 >gi|299133154|ref|ZP_07026349.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2] gi|298593291|gb|EFI53491.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2] Length = 174 Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 39/140 (27%), Gaps = 36/140 (25%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 + P I + +E L + Y + G G K G+ + G Y Sbjct: 39 YSPGTIVVKTSERRLYLILDE-----QHAIRYPV--GVGKRG-KEWAGETRI-SGKYR-N 88 Query: 109 WNNLNPNSKYFLSINIGFPNEFDKAHNRT-------------GADLMIHGECA------- 148 P+ + PN D + G IHG Sbjct: 89 PAWSPPDD-----VKRDHPNIPDVIEGGSPRNPMGVAAMTLAGGQYAIHGTNVPKSVGGY 143 Query: 149 -SAGCYAMNNKQMQEIYAIV 167 S GC M N + +++ V Sbjct: 144 VSYGCVRMYNPDITDLFERV 163 >gi|295677080|ref|YP_003605604.1| hypothetical protein BC1002_2034 [Burkholderia sp. CCGE1002] gi|295436923|gb|ADG16093.1| hypothetical protein BC1002_2034 [Burkholderia sp. CCGE1002] Length = 103 Score = 36.8 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 23/69 (33%), Gaps = 8/69 (11%) Query: 93 IETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTG------ADLMIHGE 146 E G P G Y+I + N Y L+ + + H G IHG Sbjct: 4 REEGVGPIPPGQYWIDPTQMWENHWYNLAPRAAWGDHRITIHVYPGTQTFRRGGFFIHGG 63 Query: 147 C--ASAGCY 153 SAGC Sbjct: 64 THAGSAGCI 72 >gi|255656698|ref|ZP_05402107.1| cell surface protein [Clostridium difficile QCD-23m63] Length = 644 Score = 36.8 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 25/109 (22%) Query: 75 VLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP-NEF-DK 132 L+KE+++ G K P G + N Y +I G P N D+ Sbjct: 50 KLVKEFRVAT-----GKKGSE----TPTGKTKVVNKIKN-RPYYKGNIPGGSPRNPLGDR 99 Query: 133 -----AHNRTGADLMIHGECA--------SAGCYAMNNKQMQEIYAIVR 168 G IHG S GC M+NK ++ ++ V Sbjct: 100 WMGLALKGTYGDTYGIHGNNNESSIGKHISGGCIRMHNKDVRWLFDQVP 148 >gi|113461655|ref|YP_719724.1| hypothetical protein HS_1514 [Haemophilus somnus 129PT] gi|112823698|gb|ABI25787.1| conserved hypothetical protein [Haemophilus somnus 129PT] Length = 254 Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 7/97 (7%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M+ + I + + LN C S S+ ++ + + + K PT RI K Sbjct: 1 MSIKKIIFVIFTVLLLNACADSSSINQQSASSYVQIIGQAEAKGVVDKSSPTAKRIHKIF 60 Query: 61 NILEIWKRNVDA-------EYVLLKEYKICAWSGTFG 90 + + + + ++K ++ AW+ G Sbjct: 61 KKMRPYADKENNTGQVFTWQLNVIKSKEMNAWAMPGG 97 >gi|284045708|ref|YP_003396048.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684] gi|283949929|gb|ADB52673.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684] Length = 233 Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 23/83 (27%) Query: 100 APEGFYYIGWNNLNPNSKYFL--SINIGFPNEFDKAHNRT------GADLMIHGECA--- 148 P G Y+I + ++ A+ T G + +HG Sbjct: 148 TPAGRYWIREKLRFAAQPVYGTHALGTS-------AYAPTLTEWPAGGVVGLHGTDQPEL 200 Query: 149 -----SAGCYAMNNKQMQEIYAI 166 S GC + N +M ++ + Sbjct: 201 IPGRPSHGCVRIRNAEMARLWRL 223 >gi|114769842|ref|ZP_01447452.1| hypothetical protein OM2255_09746 [alpha proteobacterium HTCC2255] gi|114549547|gb|EAU52429.1| hypothetical protein OM2255_09746 [alpha proteobacterium HTCC2255] Length = 169 Score = 36.4 bits (83), Expect = 2.9, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 15/46 (32%) Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINI 124 + K+ GD P G + I + +F S NI Sbjct: 21 TLPVAIGRSGIAEKVGEGDGITPIGKFSIKDIGFRNDRIFFNSPNI 66 >gi|237653173|ref|YP_002889487.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T] gi|237624420|gb|ACR01110.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T] Length = 159 Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 8/39 (20%) Query: 140 DLMIHGECA--------SAGCYAMNNKQMQEIYAIVRDS 170 + +HG S GC M N + E++ +V Sbjct: 114 YIYLHGTGDDQPMGVARSHGCVRMRNHDIIELFELVPAG 152 >gi|85713880|ref|ZP_01044869.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A] gi|85699006|gb|EAQ36874.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A] Length = 187 Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 53/183 (28%), Gaps = 25/183 (13%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAE------HPLSENLIISMQKKRTSPFHPTVIRI 56 R LL A+ N S +D + S + I S + P I I Sbjct: 2 TRILALLIAIAFGFNVKSASAQYVDTGDFMNFGSGFTSASPIPRQLVYFPSRYAPGTIVI 61 Query: 57 FKNENILEI-WKRNVDAEYVLLKEYKICAWSG--TFGPKIETGDEQAPEGFYYIGWNNLN 113 E L + + Y + WSG K + P L Sbjct: 62 RTGERRLYLVLPQGQALRYGIGVGRDGFRWSGVHRISAK-KEWPSWTP------PSQMLR 114 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLM-IHGEC--------ASAGCYAMNNKQMQEIY 164 + G N G+ L IHG S+GC+ M N+ + ++Y Sbjct: 115 RRPDLPRFMKGGLENPLGARAMYLGSTLYRIHGSNEPETIGRAVSSGCFRMTNEDVVDLY 174 Query: 165 AIV 167 V Sbjct: 175 NRV 177 >gi|226356728|ref|YP_002786468.1| serine proteinase [Deinococcus deserti VCD115] gi|226318718|gb|ACO46714.1| putative serine proteinase, precursor [Deinococcus deserti VCD115] Length = 402 Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 18/60 (30%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R + L + L C + +E P + + I +F ++ Sbjct: 1 MNTRIVLSTIGLSLLLAACGQTSMTSTPSESPQASASTPILGTSNPDAIPGQYIVVFHDD 60 >gi|197119531|ref|YP_002139958.1| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter bemidjiensis Bem] gi|197088891|gb|ACH40162.1| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family [Geobacter bemidjiensis Bem] Length = 286 Score = 36.4 bits (83), Expect = 3.1, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 53/176 (30%), Gaps = 39/176 (22%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R+ I ++ + + + +P P ++ E Sbjct: 72 MDRRHFIAGMSI----------------------KVPKRIEEIRGFNPMPPFY---YEAE 106 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYF- 119 ++ + + ++ EY +S +E + G Y I + S + Sbjct: 107 KQPQLILIDQNEMFLGAYEYGSLVFSAPVAVGVEEYRLK--NGSYQIDTVDPVHESSLYP 164 Query: 120 -----LSINIGFPNEFDKAHNRTG-ADLMIHGE-----CASAGCYAMNNKQMQEIY 164 + + + F G IHG AS GC + +++MQ Y Sbjct: 165 VEGTERAYPMHYGLRFHIDKRMDGWTSYWIHGRDLPGYPASHGCIGLYDEEMQAEY 220 >gi|296502714|ref|YP_003664414.1| hypothetical protein BMB171_C1880 [Bacillus thuringiensis BMB171] gi|296323766|gb|ADH06694.1| hypothetical protein BMB171_C1880 [Bacillus thuringiensis BMB171] Length = 266 Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 35/182 (19%) Query: 7 ILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIW 66 I+L + L+GC + I+ P + L KK S + K I + Sbjct: 11 IVLSIVSSLLSGCGFGETKIE--YEPFVKALDEGDMKKVMSASDDGYAYV-KQRGIYSTY 67 Query: 67 KRNVDAEYVLLKEYKICAWSGTFGPKIETG-------------DEQAPEGFYYIGWNNLN 113 ++ D E+ Y+ K G D + EG Y N Sbjct: 68 EQKEDGEHSK-TIYQTSKGIYNTKDKSLYGSTTQAVTSAVDSKDNKK-EGVYRTNIMYKN 125 Query: 114 -----PNSKYFLSINIGFPNE-FDKAHN------RTGADLMIHGECASAGCYAMNNKQMQ 161 P+S +++ + N D+ + G D+ + ++ G Y + Q Sbjct: 126 GQVKSPDSN----LDVSYVNLIVDRLKGIGKLKMKPGGDIKKFDQPSTVG-YKLTESDFQ 180 Query: 162 EI 163 I Sbjct: 181 SI 182 >gi|218675455|ref|ZP_03525124.1| hypothetical protein RetlG_30846 [Rhizobium etli GR56] Length = 86 Score = 36.4 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 20/33 (60%) Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G AS+GC+ M + ++E+Y +V+ R +Q Sbjct: 54 GTNASSGCFRMYREDVEELYEMVQPGTRVIVQR 86 >gi|229152291|ref|ZP_04280484.1| hypothetical protein bcere0011_38300 [Bacillus cereus m1550] gi|228631253|gb|EEK87889.1| hypothetical protein bcere0011_38300 [Bacillus cereus m1550] Length = 248 Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 17/117 (14%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIF--- 57 M + I LF + L GC+ ++ K + + + + K P T ++ Sbjct: 2 MMKKLIITLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQ 61 Query: 58 -KN------ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYI 107 K + EIWK + +L ++K K D G Y+I Sbjct: 62 GKEKVTDADDVKFEIWKDGDEKHEMLDGKHKGKGVYAV--EKTFEAD-----GVYHI 111 >gi|255263554|ref|ZP_05342896.1| ErfK/YbiS/YcfS/YnhG family protein [Thalassiobium sp. R2A62] gi|255105889|gb|EET48563.1| ErfK/YbiS/YcfS/YnhG family protein [Thalassiobium sp. R2A62] Length = 197 Score = 36.4 bits (83), Expect = 3.3, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 54/177 (30%), Gaps = 46/177 (25%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 + R+ + + F L PL + I+ + +F+NE Sbjct: 47 IKRRHFLNIALAFTIL--------EPLTFARPLGADEILVDSIIVEVHISTQAMNVFRNE 98 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFL 120 +L W + + P G + W + + S + Sbjct: 99 KLLYEWPVSTARPGKV-----------------------TPIGSWQAKWLSKHHRSSRYN 135 Query: 121 SINIGFPNEFDKAHNRTGADLMIHGE--------CASAGCYAMNNKQMQEIYAIVRD 169 + + + +D + +HG ASAGC ++ ++++V++ Sbjct: 136 NAPMPYSIFYD-------GNFAVHGTNQIDRLGMPASAGCIRLHPDNAAVLFSMVQE 185 >gi|304316558|ref|YP_003851703.1| ErfK/YbiS/YcfS/YnhG family protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778060|gb|ADL68619.1| ErfK/YbiS/YcfS/YnhG family protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 386 Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 19/86 (22%) Query: 100 APEGFYYIGWNNLNPN--SKYFLSINIGFPN-----EFDKAHNRTGADLMIHGEC----- 147 +P G Y I +NP S + + PN + ++ G IHG Sbjct: 61 SPLGTYRIINKQINPTWISPWNGQVVPSGPNNPLGYRWIGFYSDYG----IHGNNMPSSI 116 Query: 148 ---ASAGCYAMNNKQMQEIYAIVRDS 170 AS+GC M ++E+Y +V Sbjct: 117 GTLASSGCIRMYEADVEELYEMVNYG 142 >gi|149201519|ref|ZP_01878493.1| hypothetical protein RTM1035_03245 [Roseovarius sp. TM1035] gi|149144567|gb|EDM32596.1| hypothetical protein RTM1035_03245 [Roseovarius sp. TM1035] Length = 166 Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 12/38 (31%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 + Y G + GD P G + I P+ Sbjct: 18 RRYPCTIGRGGVSARKREGDGATPVGAHRIVGLLYRPD 55 >gi|328954133|ref|YP_004371467.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM 11109] gi|328454457|gb|AEB10286.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM 11109] Length = 300 Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 29/110 (26%) Query: 77 LKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFP--------- 127 ++ Y I D + P G + I NP + + + Sbjct: 128 VRTYPIGIGVF---------DYKTPFGRFRISSKAENPGWRIPAGLQAKYGMAYMPPGEE 178 Query: 128 NEFDKAH-NRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIVR 168 N T +HG S GC N+ ++E++ +V Sbjct: 179 NPVGTHWLGLTHYG--MHGTHAPFGVGRLVSHGCIRHYNEDIKELFELVP 226 >gi|85704098|ref|ZP_01035201.1| hypothetical protein ROS217_13906 [Roseovarius sp. 217] gi|85671418|gb|EAQ26276.1| hypothetical protein ROS217_13906 [Roseovarius sp. 217] Length = 167 Score = 36.4 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 12/38 (31%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 + Y G + GD P G + I P+ Sbjct: 18 QRYPCTLGRGGVSARKREGDGATPVGSHRIVGLLYRPD 55 >gi|83943946|ref|ZP_00956403.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36] gi|83954519|ref|ZP_00963230.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1] gi|83840803|gb|EAP79974.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1] gi|83845193|gb|EAP83073.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36] Length = 190 Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 35/188 (18%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENL---IISMQKKRTSPFHPTVIRIFKN 59 R IL +F +++ + + P+ N + I + Sbjct: 8 RRGLILTAGAALFTPALLRAQTPVPEIAAPVRHNTNGFSSQNWQDHFDTLGKAAIVADTS 67 Query: 60 ENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN---- 115 L W + K Y DE G+ I + P+ Sbjct: 68 SRALHYW----GGDGETYKIYPTSVPRS---------DELTKRGYTRIVRKRVGPDWTPT 114 Query: 116 -SKYFLSINIGF-PNEFDKAHNRTGADL-----MIHGEC--------ASAGCYAMNNKQM 160 S ++ + P D L +IHG +S GC + N + Sbjct: 115 PSMIERDPDLKYMPPGPDNPLGTHAMYLSWPAYLIHGTHDTRKIGRQSSDGCIGLYNHMI 174 Query: 161 QEIYAIVR 168 + +Y I Sbjct: 175 EALYQIAP 182 >gi|331000813|ref|ZP_08324459.1| nuclease, EndA/NucM family [Parasutterella excrementihominis YIT 11859] gi|329570341|gb|EGG52074.1| nuclease, EndA/NucM family [Parasutterella excrementihominis YIT 11859] Length = 263 Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 1/94 (1%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 N+ LL A G + ++AE P I+ K + +P + E + Sbjct: 162 NKNFGLLSASAENTFGSCAMKISSNRAEPPKYARGTIARAYKYMAYAYPIFKLSKEQERL 221 Query: 63 LEIW-KRNVDAEYVLLKEYKICAWSGTFGPKIET 95 +++W ++ + ++ +I G P ++ Sbjct: 222 MDVWDRQYPVERWECVRTKRIERIQGNENPFVKQ 255 >gi|332297961|ref|YP_004439883.1| RHS repeat-associated core domain protein [Treponema brennaborense DSM 12168] gi|332181064|gb|AEE16752.1| RHS repeat-associated core domain protein [Treponema brennaborense DSM 12168] Length = 2093 Score = 36.4 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 11/93 (11%) Query: 101 PEGFYYIGWNNLNPNSK-YFLSINIG----FP--NEFDKAHN----RTGADLMIHGECAS 149 P G + + + N L + P N+ K TG ++ + Sbjct: 1995 PNGTWSVTPSVAGTNDAEGPLKLRTNANIQVPVFNQDGKLTGEYVTDTGYNIHSGKGETT 2054 Query: 150 AGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQ 182 GC +++ + I IV +L + I++ Sbjct: 2055 IGCIKLSDADVAAIAQIVDSALVSGGSATIKVS 2087 >gi|110803943|ref|YP_697373.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens SM101] gi|110684444|gb|ABG87814.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium perfringens SM101] Length = 386 Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 26/140 (18%) Query: 45 RTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 + ++ + E ++ ++ L K + G ++ P G Sbjct: 257 DITSNTNYLVFVNIAEQKTYVY-EGSKNDWTLDKTFTCSTG--------IEG-KETPVGI 306 Query: 105 YYIGWNNLNPNS-------KYFLSINIGF-----PNEFDKAHNRTGADLMIHGECASAGC 152 + + S KY++ + P DK T +D + G AS GC Sbjct: 307 FTVQTRAPWFFSPKYGQGGKYYVQFMGNYLFHSIPFNSDKT---TVSDPTL-GVPASHGC 362 Query: 153 YAMNNKQMQEIYAIVRDSLR 172 ++ + + +Y V++ + Sbjct: 363 IRLSVEDSKWLYDNVQNGSK 382 >gi|92115727|ref|YP_575456.1| hypothetical protein Nham_0095 [Nitrobacter hamburgensis X14] gi|91798621|gb|ABE60996.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 213 Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 6/38 (15%), Positives = 11/38 (28%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN 115 + + + G GD P G + P+ Sbjct: 64 RAFPVALGRGGIRANKREGDGGTPRGIFRPIRLWWRPD 101 >gi|1224063|gb|AAA92302.1| major outer membrane surface protein B [Borrelia garinii] Length = 295 Score = 36.0 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPL--SENLIISMQKKRTSPFHPTVIRIFKNE 60 + +L FAL + L C H + + + S+ KK +++F + Sbjct: 1 MKKYLLGFALVLALIACGHKGAEPKHNDQEVEDSKKDQKDASKKDLPLVTEDTVKLFNDT 60 Query: 61 NILEIWKRNVDAEYVLLKE 79 I ++N D +Y L Sbjct: 61 KIFISKEKNKDGKYDLRAT 79 >gi|302548258|ref|ZP_07300600.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302465876|gb|EFL28969.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 248 Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 50/171 (29%) Query: 28 KAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSG 87 +++ P + ++++ K + TV+ K ++ + + Sbjct: 67 QSKIPGNSRQVVAVYGKGVNSADATVVLYTKE-----------GKDWKRTRSWAGHNGKR 115 Query: 88 TFGPKIETGDEQAPEGFYYIG----------------------WNNLNPNS---KYFLSI 122 + + GD+++P G Y + + P S + I Sbjct: 116 GWTTRHHEGDKRSPVGVYTLSDAGGVLPDPGARLPYTETAAFAAPHYWPKSHWTDFNYVI 175 Query: 123 NIGFPN------EFDKAH---NRTGADLMI---HGECASAGCYAMNNKQMQ 161 I + N D + R G + + HG SA C ++ M+ Sbjct: 176 AIDY-NRVKGTSPLDPSRPEGQRKGGSIWLHMDHGSGTSA-CVSLPKSGME 224 >gi|222056221|ref|YP_002538583.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] gi|221565510|gb|ACM21482.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32] Length = 277 Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 33/129 (25%) Query: 47 SPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 + H I I E L + E+ LK + + A SGT G + P G + Sbjct: 114 AKGHRKYIVIDLGEQWLGAY------EFGKLK-FSMPAASGTKGH-------ETPTGLFR 159 Query: 107 IGWNNLNPNSKYFLS--------------INIGFPNEFDKAHNRTGADLMIHGECASAGC 152 + + N S + + +IG N H R + G+ AS GC Sbjct: 160 VDARHRNHTSSLYKTEDDTAQYPMDNAIRFHIGPDNVSYWIHARD-----LPGKPASHGC 214 Query: 153 YAMNNKQMQ 161 + ++ MQ Sbjct: 215 VGLADEGMQ 223 >gi|303257170|ref|ZP_07343184.1| extracellular deoxyribonuclease (DNase) [Burkholderiales bacterium 1_1_47] gi|302860661|gb|EFL83738.1| extracellular deoxyribonuclease (DNase) [Burkholderiales bacterium 1_1_47] Length = 263 Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 1/94 (1%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENI 62 N+ LL A G + ++AE P I+ K + +P + E + Sbjct: 162 NKNFGLLSASAENTFGSCAMKISSNRAEPPKYARGTIARAYKYMAYAYPIFKLSKEQERL 221 Query: 63 LEIW-KRNVDAEYVLLKEYKICAWSGTFGPKIET 95 +++W ++ ++ ++ +I G P ++ Sbjct: 222 MDVWDRQYPVEKWECVRTKRIERIQGNENPFVKQ 255 >gi|218510142|ref|ZP_03508020.1| hypothetical protein RetlB5_23325 [Rhizobium etli Brasil 5] Length = 76 Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 20/33 (60%) Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G AS+GC+ M + ++E+Y +V+ + +Q Sbjct: 44 GTNASSGCFRMYREDVEELYDMVQPGTQVIVQR 76 >gi|261405729|ref|YP_003241970.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10] gi|261282192|gb|ACX64163.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10] Length = 102 Score = 36.0 bits (82), Expect = 4.2, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 29/89 (32%), Gaps = 25/89 (28%) Query: 100 APEGFYYIGWNNLNPNSK-------------YFLSINIGFPNEFDKAHNRTGADLMIHGE 146 PEG + I N + I K + RT IHG Sbjct: 10 TPEGLFKIHEKVKNRPYYKEGIKGGDPRNPLGDRWLGINV-----KVNGRTSYAYAIHGN 64 Query: 147 C-------ASAGCYAMNNKQMQEIYAIVR 168 SAGC M+NK ++ +Y V+ Sbjct: 65 NANSIGKYVSAGCIRMHNKDVRWLYDKVK 93 >gi|291571480|dbj|BAI93752.1| probable hydrolase [Arthrospira platensis NIES-39] Length = 277 Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 138 GADLM-IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190 G ++ +HG S GC ++ + + Y + LRG +S ++ PF MT Sbjct: 15 GFPILCLHGHPGSGGCMSVFTDHLSQNYQTIAPDLRGYGKSQVKQ---PFEMTD 65 >gi|284050951|ref|ZP_06381161.1| alpha/beta hydrolase fold protein [Arthrospira platensis str. Paraca] Length = 277 Score = 36.0 bits (82), Expect = 4.3, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 138 GADLM-IHGECASAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAFPFRMTS 190 G ++ +HG S GC ++ + + Y + LRG +S ++ PF MT Sbjct: 15 GFPILCLHGHPGSGGCMSVFTDHLSQNYQTIAPDLRGYGKSQVKQ---PFEMTD 65 >gi|327314634|ref|YP_004330071.1| CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase [Prevotella denticola F0289] gi|326944411|gb|AEA20296.1| CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase [Prevotella denticola F0289] Length = 403 Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 47 SPFHPTVIRIFKNENILE---IWKRNVDAEYVLLK---EYKICAWSGTFGPKIETGDEQA 100 P IR FK +L + NV +K +Y I W G FG K D + Sbjct: 86 QRIEPVKIRSFKGMRVLAGSKVIVNNVKNPLPFIKKKGQYYIQTWHGPFGLKYIENDAKE 145 Query: 101 PEGFYYIGWNNLN 113 YYI + + Sbjct: 146 HLSSYYIKHSQKD 158 >gi|319783643|ref|YP_004143119.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169531|gb|ADV13069.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 375 Score = 36.0 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 44/146 (30%), Gaps = 41/146 (28%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTF--------GPKIETGDEQAPE--- 102 I I + L + + + A + Y I G K P Sbjct: 240 IVIDTSARRLYLVESSSTA-----RRYAIAVGREGLQFKGTVAVGDKQ-EWPRWIPTLDM 293 Query: 103 --------GFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRTGADLMIHGE-------- 146 G Y G N +I + +D + L IHG Sbjct: 294 QKREPKHYGQYKDGMPGGGQNPLGARAIYL-----YD---GKKDTHLRIHGTIAPQSIGT 345 Query: 147 CASAGCYAMNNKQMQEIYAIVRDSLR 172 AS GC+ M N+ + ++Y+ VR + Sbjct: 346 SASNGCFRMINEHVMDLYSRVRVGTK 371 >gi|86357640|ref|YP_469532.1| hypothetical protein RHE_CH02021 [Rhizobium etli CFN 42] gi|86281742|gb|ABC90805.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 203 Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 20/33 (60%) Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G AS+GC+ M + ++E+Y +V+ R +Q Sbjct: 171 GTNASSGCFRMYREDVEELYDMVQPGTRVIVQR 203 >gi|298293120|ref|YP_003695059.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506] gi|296929631|gb|ADH90440.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506] Length = 170 Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 39/163 (23%), Gaps = 47/163 (28%) Query: 32 PLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGP 91 PL+ P I + E L + V ++ Y + Sbjct: 18 PLASASAREAVAFDKPGVRPGTIVVSARERRLYL----VTGPGKAIR-YPVAVGRRG--- 69 Query: 92 KIETGDEQAPEGFYY-------------------IGWNNLNPNSKYFLSINIGFPNEFDK 132 K G + G Y + N ++ + Sbjct: 70 KQWQGQVRI-SGKYVEPAWSPPAEIKRDNPKLPDVIPGGTRANPMGARAMTLS------- 121 Query: 133 AHNRTGADLMIHGEC--------ASAGCYAMNNKQMQEIYAIV 167 G IHG AS GC M N + ++Y V Sbjct: 122 ----GGGQYAIHGTNQPRSIGTFASYGCVRMYNDDIIDLYGRV 160 >gi|187735406|ref|YP_001877518.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC BAA-835] gi|187425458|gb|ACD04737.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC BAA-835] Length = 187 Score = 36.0 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 29/87 (33%) Query: 79 EYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNR-- 136 ++ +C + + P G + I ++ S N +D + Sbjct: 100 DFPVCVGKAS---------HRTPVGHFRITEKAVHHVS-----------NLYDASMPYFM 139 Query: 137 --TGADLMIH-----GECASAGCYAMN 156 T + + +H S GC M Sbjct: 140 RLTDSGIGMHVGPVFQTPQSHGCIRMT 166 >gi|218673644|ref|ZP_03523313.1| hypothetical protein RetlG_19778 [Rhizobium etli GR56] Length = 307 Score = 35.7 bits (81), Expect = 5.1, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 26/124 (20%) Query: 54 IRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLN 113 I + K++ L ++ ++ K+ G G P G + + Sbjct: 31 IFVSKDKQSLAVYDGT-----EVVATSKVST--GKDGH-------TTPSGIFSVLEKRKY 76 Query: 114 PNSKYFLSINIGFPNEFDKAHNRTGADLMIHGECA------SAGCYAMNNKQMQEIYAIV 167 S + + + F T + + +H + S GC M + +Y + Sbjct: 77 HESNLYSAAPMPF------MQRLTWSGIALHESNSVPRYPASHGCVRMPGAFAKMLYGMT 130 Query: 168 RDSL 171 + Sbjct: 131 EAGI 134 >gi|190891261|ref|YP_001977803.1| hypothetical protein RHECIAT_CH0001648 [Rhizobium etli CIAT 652] gi|190696540|gb|ACE90625.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 203 Score = 35.7 bits (81), Expect = 5.3, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 20/33 (60%) Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G AS+GC+ M + ++E+Y +V+ R +Q Sbjct: 171 GTNASSGCFRMYREDVEELYDMVQPGTRVIVQR 203 >gi|209546936|ref|YP_002278854.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538180|gb|ACI58114.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 203 Score = 35.7 bits (81), Expect = 5.3, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 20/33 (60%) Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G AS+GC+ M + ++E+Y +V+ R +Q Sbjct: 171 GTNASSGCFRMYREDVEELYDMVQPGTRVIVQR 203 >gi|319651464|ref|ZP_08005592.1| hypothetical protein HMPREF1013_02204 [Bacillus sp. 2_A_57_CT2] gi|317396779|gb|EFV77489.1| hypothetical protein HMPREF1013_02204 [Bacillus sp. 2_A_57_CT2] Length = 173 Score = 35.7 bits (81), Expect = 5.4, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 31/101 (30%), Gaps = 36/101 (35%) Query: 97 DEQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFDKAHNRT---------GAD------- 140 D+ PEG + + NP Y+ + D G D Sbjct: 62 DDLTPEGMFTVTVKAANP---YYR--------KKDIKGGDPRNPLGTRWIGFDAEDTDGR 110 Query: 141 LM-IHGEC--------ASAGCYAMNNKQMQEIYAIVRDSLR 172 + IHG S GC + N+ ++ +Y V + Sbjct: 111 IYGIHGTNDPASIGRYVSNGCIRLQNEAVESLYESVPVGTK 151 >gi|85374016|ref|YP_458078.1| hypothetical protein ELI_05945 [Erythrobacter litoralis HTCC2594] gi|84787099|gb|ABC63281.1| hypothetical protein ELI_05945 [Erythrobacter litoralis HTCC2594] Length = 315 Score = 35.7 bits (81), Expect = 5.6, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 52/184 (28%), Gaps = 37/184 (20%) Query: 1 MTNRYNILLFALFIFLNG--CHHSRSLIDKAEHPLSENLIISMQKKRTSPFHP------- 51 M + A I L+ C S +A P + +P P Sbjct: 1 MRSTLAGSSIAAAILLSVTTCVPVSSDPVRAVAPAVAAKTPPVPVAEWTPEPPPEVTVDD 60 Query: 52 -----TVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYY 106 VI I + +++ L + + ++ P G + Sbjct: 61 TLRDGVVIVISNASQHMHVFQDG-----RLWRSSPVSTGKRG---------KETPTGVFA 106 Query: 107 IGWNNLNPNSKYFLS-INIGFPNEFDKAHNRTGADL---MIHGECASAGCYAMNNKQMQE 162 I ++ S + P F + G + + G AS GC + + + Sbjct: 107 ILQKR-----RFHRSNLYSNAPMPFMQRLTWDGIAIHAGRLPGYPASHGCIRLPSNFAND 161 Query: 163 IYAI 166 ++ + Sbjct: 162 LFRL 165 >gi|78222787|ref|YP_384534.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] gi|78194042|gb|ABB31809.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15] Length = 303 Score = 35.7 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 16/91 (17%) Query: 80 YKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIG--FPNEFDKAHNRT 137 + + A +G G + P G + I + S + + ++ +P +F + Sbjct: 155 FSMPAATGKTGH-------ETPTGLFRIDARHRTHTSSLYQTDDLSAQYPMDFAMRFHIG 207 Query: 138 GADL--MIH-----GECASAGCYAMNNKQMQ 161 ++ IH G+ AS GC + ++ MQ Sbjct: 208 ADNVSYWIHARDLPGKPASHGCVGLFDESMQ 238 >gi|260432322|ref|ZP_05786293.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416150|gb|EEX09409.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] Length = 166 Score = 35.7 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 14/51 (27%), Gaps = 3/51 (5%) Query: 78 KEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPN---SKYFLSINIG 125 K + G GD P G I P+ ++ IG Sbjct: 18 KTFPCSIGKGGLTNAKREGDGATPTGVLRIVGMLYRPDRIAPPAPWALPIG 68 >gi|56808847|ref|ZP_00366559.1| COG0681: Signal peptidase I [Streptococcus pyogenes M49 591] gi|209558687|ref|YP_002285159.1| Putative signal peptidase I [Streptococcus pyogenes NZ131] gi|4033712|gb|AAC97149.1| LepA [Streptococcus pyogenes] gi|209539888|gb|ACI60464.1| Putative signal peptidase I [Streptococcus pyogenes NZ131] Length = 173 Score = 35.7 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Query: 99 QAPEGFYYI--GWNNLNPNSKYFLSINIG 125 + P G Y+I + +S+Y+ ++ I Sbjct: 130 KVPTGTYFILNDYREERLDSRYYGALPIN 158 >gi|122725177|gb|ABM66478.1| SipA2 [Streptococcus pyogenes] Length = 173 Score = 35.7 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Query: 99 QAPEGFYYI--GWNNLNPNSKYFLSINIG 125 + P G Y+I + +S+Y+ ++ I Sbjct: 130 KVPTGTYFILNDYREERLDSRYYGALPIN 158 >gi|2440242|dbj|BAA22341.1| outer surface protein B [Borrelia garinii] Length = 264 Score = 35.7 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPL--SENLIISMQKKRTSPFHPTVIRIFKNE 60 + +L FAL + L C + + + S+ KK + +F Sbjct: 1 MKKYLLGFALVLALIACGQKGAEPKHNDQEVEDSKKDQKDASKKDLPLVAEDSVSLFNGT 60 Query: 61 NILEIWKRNVDAEYVLLKE 79 I ++N +Y L Sbjct: 61 KIFVSKEKNKAGKYELRAT 79 >gi|152976556|ref|YP_001376073.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025308|gb|ABS23078.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cytotoxicus NVH 391-98] Length = 169 Score = 35.7 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 42/133 (31%), Gaps = 34/133 (25%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I + K N L D + + + I K PEG + I Sbjct: 29 FIIVNKENNKL---AYINDGKIQNM--FPIATG------KTNE---LTPEGTFDIVMKAK 74 Query: 113 NPNSKYFLSINI--GFP-NEFD------KAHNRTGADLMIHGECA--------SAGCYAM 155 NP Y+++ NI G P N A G+ IHG S GC M Sbjct: 75 NP---YYIAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRM 131 Query: 156 NNKQMQEIYAIVR 168 ++ ++ V Sbjct: 132 KKHDVEYLFDRVP 144 >gi|228998939|ref|ZP_04158522.1| hypothetical protein bmyco0003_34970 [Bacillus mycoides Rock3-17] gi|229006470|ref|ZP_04164123.1| hypothetical protein bmyco0002_33810 [Bacillus mycoides Rock1-4] gi|228754783|gb|EEM04175.1| hypothetical protein bmyco0002_33810 [Bacillus mycoides Rock1-4] gi|228760814|gb|EEM09777.1| hypothetical protein bmyco0003_34970 [Bacillus mycoides Rock3-17] Length = 186 Score = 35.3 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 41/133 (30%), Gaps = 42/133 (31%) Query: 53 VIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIGWNNL 112 I + K N L D + K + I K PEG + I Sbjct: 29 FIIVNKQTNKL---AYIDDGKIQ--KVFPIATG------KTNE---LTPEGSFDIVMKAK 74 Query: 113 NPNSKYFLS--INIGFP-----------NEFDKAHNRTGADLMIHGECA--------SAG 151 NP Y+++ I G P N D ++ G IHG S G Sbjct: 75 NP---YYIAKDIPGGSPKNPLGSRWMGFNARDTDGSKYG----IHGTNQPSSIGKYISQG 127 Query: 152 CYAMNNKQMQEIY 164 C M ++ ++ Sbjct: 128 CIRMKKNDVEYLF 140 >gi|21909635|ref|NP_663903.1| hypothetical protein SpyM3_0099 [Streptococcus pyogenes MGAS315] gi|28895013|ref|NP_801363.1| hypothetical protein SPs0101 [Streptococcus pyogenes SSI-1] gi|21903817|gb|AAM78706.1| hypothetical protein SpyM3_0099 [Streptococcus pyogenes MGAS315] gi|28810258|dbj|BAC63196.1| LepA [Streptococcus pyogenes SSI-1] Length = 173 Score = 35.3 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Query: 99 QAPEGFYYI--GWNNLNPNSKYFLSINIG 125 + P G Y+I + +S+Y+ ++ I Sbjct: 130 KVPTGTYFILNDYREERLDSRYYGALPIN 158 >gi|300779801|ref|ZP_07089657.1| probable secreted protein [Corynebacterium genitalium ATCC 33030] gi|300533911|gb|EFK54970.1| probable secreted protein [Corynebacterium genitalium ATCC 33030] Length = 253 Score = 35.3 bits (80), Expect = 6.9, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 26/108 (24%) Query: 81 KICAWSGTFGPKIETGDEQAPEGFYYIGWNNLNPNS-KYFLSINIGFPNEFDKAHNRTGA 139 + SG G + P+GF+Y+ + S ++ + P F G Sbjct: 168 PVRMGSGKPGH-------ETPKGFFYVNRKVKDEISWEFNNA-----PMPFATYFTFNG- 214 Query: 140 DLMIH-GECA--SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 + H G+ + S GC M+ + ++ + ++Q Q+ F Sbjct: 215 -IAFHQGDPSIKSHGCVRMHRQDAEQYF--------NSLQIGDQVHVF 253 >gi|260753753|ref|YP_003226646.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553116|gb|ACV76062.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 179 Score = 35.3 bits (80), Expect = 6.9, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 7/60 (11%) Query: 63 LEIWKRNVDA---EYVLLKEYKICAWSGTFG----PKIETGDEQAPEGFYYIGWNNLNPN 115 +EI+ + E + Y+ G G K GD + P G + + L P+ Sbjct: 2 VEIYIDSQSGILTEERDGRRYQTSCALGKNGVIAADKKREGDNKTPLGCWPVRGALLRPD 61 >gi|241762165|ref|ZP_04760248.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373415|gb|EER63015.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 179 Score = 35.3 bits (80), Expect = 6.9, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 7/60 (11%) Query: 63 LEIWKRNVDA---EYVLLKEYKICAWSGTFG----PKIETGDEQAPEGFYYIGWNNLNPN 115 +EI+ + E + Y+ G G K GD + P G + + L P+ Sbjct: 2 VEIYIDSQSGILTEERDGRRYQTSCALGKNGVIAADKKREGDNKTPLGCWPVRGALLRPD 61 >gi|94987743|ref|YP_595844.1| signal peptidase I [Streptococcus pyogenes MGAS9429] gi|94991611|ref|YP_599710.1| Signal peptidase I [Streptococcus pyogenes MGAS2096] gi|19224136|gb|AAL86407.1|AF447492_4 LepA [Streptococcus pyogenes] gi|94541251|gb|ABF31300.1| signal peptidase I [Streptococcus pyogenes MGAS9429] gi|94545119|gb|ABF35166.1| Signal peptidase I [Streptococcus pyogenes MGAS2096] Length = 173 Score = 35.3 bits (80), Expect = 6.9, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Query: 99 QAPEGFYYI--GWNNLNPNSKYFLSINIG 125 + P G Y+I + +S+Y+ ++ I Sbjct: 130 KVPTGTYFILNDYREERLDSRYYGALPIN 158 >gi|56552591|ref|YP_163430.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp. mobilis ZM4] gi|56544165|gb|AAV90319.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 179 Score = 35.3 bits (80), Expect = 6.9, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 7/60 (11%) Query: 63 LEIWKRNVDA---EYVLLKEYKICAWSGTFG----PKIETGDEQAPEGFYYIGWNNLNPN 115 +EI+ + E + Y+ G G K GD + P G + + L P+ Sbjct: 2 VEIYIDSQSGILTEERDGRRYQTSCALGKNGVIAADKKREGDNKTPLGCWPVRGALLRPD 61 >gi|225851535|ref|YP_002731769.1| ErfK/YbiS/YcfS/YnhG family protein [Persephonella marina EX-H1] gi|225644873|gb|ACO03059.1| ErfK/YbiS/YcfS/YnhG family protein [Persephonella marina EX-H1] Length = 427 Score = 35.3 bits (80), Expect = 7.0, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 28/107 (26%) Query: 98 EQAPEGFYYIGWNNLNPNSKYFLSINIGFPNEFD------------KAHNRTGADLMIHG 145 ++P G ++I NP +I P+ D +A + ++HG Sbjct: 271 NRSPIGDFFISEKRKNPAWYVPDNIKEEDPSLPDIVPPGPNNPLGTRAMRLSNTTYLLHG 330 Query: 146 ECA--------SAGCYAMNNKQMQEIYAIVRDSLRGNMQSHIQIQAF 184 S GC M N+ ++ ++ +V + + + Sbjct: 331 TSKRFGIGMKVSHGCIRMYNEDVEALFDLVETGTK--------VHIY 369 >gi|2440266|dbj|BAA22357.1| outer surface protein B [Borrelia garinii] Length = 268 Score = 35.3 bits (80), Expect = 7.1, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPL--SENLIISMQKKRTSPFHPTVIRIFKNE 60 + +L FAL + L C + + S+ KK +++F + Sbjct: 1 MKKYLLGFALVLALIACGQKGGEPLHNDQEVEDSKKDQKDASKKDLPLATEDTVKLFNDT 60 Query: 61 NILEIWKRNVDAEYVLLKE 79 I ++N D +Y L Sbjct: 61 KIFISKEKNKDGKYELRAT 79 >gi|148263470|ref|YP_001230176.1| hypothetical protein Gura_1402 [Geobacter uraniireducens Rf4] gi|146396970|gb|ABQ25603.1| hypothetical protein Gura_1402 [Geobacter uraniireducens Rf4] Length = 276 Score = 35.3 bits (80), Expect = 7.1, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 26/125 (20%) Query: 49 FHPTVIRIFKNENILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFYYIG 108 I + ++E L ++ L+ + + P G + I Sbjct: 105 EEEKFILLDQSEMFLGAYEYG-----ELVFSFPAAVGIAG---------HRVPNGEFRID 150 Query: 109 WNNLNPNSKYFLSINIG--FPNEF-------DKAHNRTGADLM---IHGECASAGCYAMN 156 + S + IG +P + +A T + I G AS GC + Sbjct: 151 AADRKHISNLYTIEEIGRRYPMHYALRFYVDKRAKGWTSYFIHGRDIPGYPASHGCIGLY 210 Query: 157 NKQMQ 161 +++MQ Sbjct: 211 DEEMQ 215 >gi|115605616|gb|ABJ15820.1| SipA2 [Streptococcus pyogenes] gi|122725165|gb|ABM66470.1| SipA2 [Streptococcus pyogenes] Length = 173 Score = 35.3 bits (80), Expect = 7.1, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Query: 99 QAPEGFYYI--GWNNLNPNSKYFLSINIG 125 + P G Y+I + +S+Y+ ++ I Sbjct: 130 KVPTGTYFILNDYREERLDSRYYGALPIN 158 >gi|71902774|ref|YP_279577.1| signal peptidase I [Streptococcus pyogenes MGAS6180] gi|71801869|gb|AAX71222.1| signal peptidase I [Streptococcus pyogenes MGAS6180] Length = 173 Score = 35.3 bits (80), Expect = 7.1, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Query: 99 QAPEGFYYI--GWNNLNPNSKYFLSINIG 125 + P G Y+I + +S+Y+ ++ I Sbjct: 130 KVPTGTYFILNDYREERLDSRYYGALPIN 158 >gi|197119064|ref|YP_002139491.1| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter bemidjiensis Bem] gi|197088424|gb|ACH39695.1| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, LysM domain-containing protein [Geobacter bemidjiensis Bem] Length = 278 Score = 35.3 bits (80), Expect = 7.2, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 9/71 (12%) Query: 100 APEGFYYIGWNNLNPNSKYFLSINIG--FP--NEFDKAHNRTGADLMIH-----GECASA 150 P G Y I + S + + + +P N IH G+ AS Sbjct: 153 TPVGLYRIDARDRQHTSSLYQTEDGSAQYPMDNAMRFHIGADNVSYWIHARDLPGKPASH 212 Query: 151 GCYAMNNKQMQ 161 GC + ++ MQ Sbjct: 213 GCVGLFDEGMQ 223 >gi|19745302|ref|NP_606438.1| hypothetical protein spyM18_0127 [Streptococcus pyogenes MGAS8232] gi|19747401|gb|AAL96937.1| LepA [Streptococcus pyogenes MGAS8232] Length = 173 Score = 35.3 bits (80), Expect = 7.2, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Query: 99 QAPEGFYYI--GWNNLNPNSKYFLSINIG 125 + P G Y+I + +S+Y+ ++ I Sbjct: 130 KVPTGTYFILNDYREERLDSRYYGALPIN 158 >gi|283850166|ref|ZP_06367455.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B] gi|283574192|gb|EFC22163.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B] Length = 398 Score = 35.3 bits (80), Expect = 7.3, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 20/129 (15%) Query: 13 FIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNENILEIWKRNVDA 72 + + S P+ + + T +R F+ + W Sbjct: 158 AVPASAAADSGRNPSSGSFPVPNCRQLVLVVAPTFEADRGTLRRFERQGPDSPWVEAGAP 217 Query: 73 EYVLLKEYKICAWSGT----FGPKIETGDEQAPEGFYYIGWNNLNPNSKYFLSINIGFPN 128 +L + A G GP GD + P G + + L+ G+ Sbjct: 218 SPCVLGRKGLGAGRGLTPPLAGPAKRQGDGRTPAGLFPL-----------PLAF--GY-- 262 Query: 129 EFDKAHNRT 137 D RT Sbjct: 263 -ADAQAART 270 >gi|83952916|ref|ZP_00961645.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius nubinhibens ISM] gi|83835707|gb|EAP75007.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius nubinhibens ISM] Length = 192 Score = 35.3 bits (80), Expect = 7.4, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 51/194 (26%), Gaps = 40/194 (20%) Query: 1 MTNRYNILLFALFIFLNGCHHSRSLIDKAEHPLSENLIISMQKKRTSPFHPTVIRIFKNE 60 M R LL A + + + ++ L + + P I + ++ Sbjct: 1 MNRRKF-LLAAGAVGTLASQPVSAHVVLPKYDLPPEYLPQVVSIPEG-SAPYEIHVVPSQ 58 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTF--------GPKIETGDEQAPEGFYYIGWNNL 112 L W + + Y + G K + P L Sbjct: 59 FAL-FWTQPDNTAIR----YAVGIGRPGLYEAGEFYVGAK-KEWPSWTP------TPGML 106 Query: 113 NPNSKYFLSINIGFP----NEFDKAH------NRTGADLMIHGEC--------ASAGCYA 154 K + G P N R L +HG S GC Sbjct: 107 RREPKKYGPFRNGMPGGLSNPLGARALYLFQPGRGDTFLRVHGTNDPSTIGSAVSNGCAR 166 Query: 155 MNNKQMQEIYAIVR 168 + N Q+ ++Y +V Sbjct: 167 LVNDQIVQLYDMVP 180 >gi|2440275|dbj|BAA22363.1| outer surface protein B [Borrelia garinii] Length = 264 Score = 35.3 bits (80), Expect = 8.1, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 33/104 (31%), Gaps = 5/104 (4%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPL--SENLIISMQKKRTSPFHPTVIRIFKNE 60 + +L FAL + L C + + + S+ KK + +F Sbjct: 1 MKKYLLGFALVLALIACGQKGAEPKHNDQEVENSKKDQKDASKKDLPLVTEDSVSLFNGT 60 Query: 61 NILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGF 104 I ++N +Y L G F +G PEG Sbjct: 61 KIFVSKEKNKAGKYELRATVDTGELKGDFDKNNGSG---LPEGV 101 >gi|258593540|emb|CBE69881.1| ErfK/YbiS/YcfS/YnhG precursor [NC10 bacterium 'Dutch sediment'] Length = 290 Score = 35.3 bits (80), Expect = 8.3, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 9/79 (11%) Query: 95 TGDEQAPEGFYYIGWNNLNPNSKYFL--SINIGFP-NEFDKAHNRT-GADLMIHGE---- 146 + + P G + I + +S + I +P N + H T G +HG Sbjct: 142 ERENETPAGEFTITAAHRRHHSSRYTIEKTGIPYPMNYALRFHTSTDGIAFWMHGRDMPG 201 Query: 147 -CASAGCYAMNNKQMQEIY 164 AS GC + ++ MQ+ Y Sbjct: 202 YPASHGCIGLYDEPMQKKY 220 >gi|327188449|gb|EGE55663.1| hypothetical protein RHECNPAF_890076 [Rhizobium etli CNPAF512] Length = 204 Score = 34.9 bits (79), Expect = 8.5, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 20/33 (60%) Query: 145 GECASAGCYAMNNKQMQEIYAIVRDSLRGNMQS 177 G AS+GC+ M + ++E+Y +V+ + +Q Sbjct: 172 GTNASSGCFRMYREDVEELYDMVQPGTQVIVQR 204 >gi|302848221|ref|XP_002955643.1| hypothetical protein VOLCADRAFT_66117 [Volvox carteri f. nagariensis] gi|300259052|gb|EFJ43283.1| hypothetical protein VOLCADRAFT_66117 [Volvox carteri f. nagariensis] Length = 767 Score = 34.9 bits (79), Expect = 8.7, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 5/54 (9%) Query: 87 GTFGPKIETGDEQAPEGFYYIGWNNLNP--NSKYFLSINIGFPNEFDKAHNRTG 138 G P+I+ D PEG Y + NS + + + N D++ TG Sbjct: 656 GGVYPEIKEPDYLTPEGDYRVDARGTKTMLNSLMYK---LSYYNFADESQLSTG 706 >gi|15896908|ref|NP_350257.1| hypothetical protein CA_C3676 [Clostridium acetobutylicum ATCC 824] gi|15026778|gb|AAK81597.1|AE007862_7 Uncharacterized conserved protein [Clostridium acetobutylicum ATCC 824] gi|325511084|gb|ADZ22720.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018] Length = 308 Score = 34.9 bits (79), Expect = 8.7, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 16/44 (36%) Query: 62 ILEIWKRNVDAEYVLLKEYKICAWSGTFGPKIETGDEQAPEGFY 105 L ++++ + L K + GD + PEG + Sbjct: 130 KLFTYEKDNSNTWRLKLTTKGVVGVKGISLNKKEGDLKTPEGIF 173 >gi|259417407|ref|ZP_05741326.1| twin-arginine translocation pathway signal [Silicibacter sp. TrichCH4B] gi|259346313|gb|EEW58127.1| twin-arginine translocation pathway signal [Silicibacter sp. TrichCH4B] Length = 205 Score = 34.9 bits (79), Expect = 9.7, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 145 GECASAGCYAMNNKQMQEIYAIVRDS 170 G +S GC + N+ + E+Y + R Sbjct: 174 GRKSSNGCIGLYNEHIAELYKLTRSG 199 >gi|2440272|dbj|BAA22361.1| outer surface protein B [Borrelia garinii] Length = 264 Score = 34.9 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 3 NRYNILLFALFIFLNGCHHSRSLIDKAEHPL--SENLIISMQKKRTSPFHPTVIRIFKNE 60 + +L FAL + L C + + + S+ KK + +F Sbjct: 1 MKKYLLGFALVLALIACGQKGAEPKHNDQEVEDSKKDQKDASKKDLPLVTEDSVSLFNGT 60 Query: 61 NILEIWKRNVDAEYVLLKE 79 I ++N +Y L Sbjct: 61 KIFVCVEKNKAGKYELRAT 79 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.311 0.149 0.486 Lambda K H 0.267 0.0457 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,703,879,584 Number of Sequences: 14124377 Number of extensions: 139362778 Number of successful extensions: 406027 Number of sequences better than 10.0: 1420 Number of HSP's better than 10.0 without gapping: 785 Number of HSP's successfully gapped in prelim test: 635 Number of HSP's that attempted gapping in prelim test: 403068 Number of HSP's gapped (non-prelim): 1526 length of query: 239 length of database: 4,842,793,630 effective HSP length: 135 effective length of query: 104 effective length of database: 2,936,002,735 effective search space: 305344284440 effective search space used: 305344284440 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 79 (34.9 bits)