HHsearch alignment for GI: 254780591 and conserved domain: COG0354
>COG0354 Predicted aminomethyltransferase related to GcvT [General function prediction only].
Probab=100.00 E-value=1.8e-36 Score=231.94 Aligned_cols=265 Identities=27% Similarity=0.414 Sum_probs=192.8
Q ss_pred CCEEECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHH
Q ss_conf 94176179407999875878786321326731089982689999979998899899997045552000033333456777
Q gi|254780591|r 1 MSSVYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDK 80 (273)
Q Consensus 1 m~~~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~ 80 (273)
T Consensus 14 ~~l~~l~~~~li~V~G~D~~kfLq~q~T~dv~~l~~g~~~~~a~l~~qGrv~~~~~~~~~~d~~~l~~~~~~~~~~l~~L 93 (305)
T COG0354 14 LTLVLLSDRALIRVSGADAEKFLQGQLTNDVSALAEGQSTLAALLTPQGRVLFDFRLYRRGDGLYLDTDKSVLEALLKRL 93 (305)
T ss_pred CEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEEEEECCEEEEECCHHHCHHHHHHH
T ss_conf 37886587306999877789987677777676445575546668778722889889998688489971600047999998
Q ss_pred HHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC----------CCCCCCC-----HHHHHHCCCCCCCCCHHHHH
Q ss_conf 64321000122356884369999718543222111234----------5664441-----01222101355557967888
Q gi|254780591|r 81 LLFYKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDE----------RFSIADV-----LLHRTWGHNEKIASDIKTYH 145 (273)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 145 (273)
T Consensus 94 ~kY~~~s-kv~i~~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 170 (305)
T COG0354 94 KKYALRS-KVTIAPSD--LVLIGVAGEEAAEALAVDFPALPKQWRAAGRFLLDLPVPRLLQLVPKLALPQALEASLDQWL 170 (305)
T ss_pred HHCEECC-CCEEECCC--CEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 7410000-12574277--42688750332211211353456434556641222451455543212035533335688999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCE
Q ss_conf 88875201334565432212331001112201331475213310132100124443478874013456678988724677
Q gi|254780591|r 146 ELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTKGCYIGQEVVSRIQHRNIIRKRPMIITGTDDLPPSGSPILTDDI 225 (273)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~f~G~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~g~ 225 (273)
T Consensus 171 ~lri~~G~p~~~-~~~~~~~iPqevnl~~~~gISF~KGCYvGQE~VAR~~~rG~~kRrl~~l~~d~~~p~~g~~i~a~~~ 249 (305)
T COG0354 171 ALRIRAGIPGID-DATSEDFIPQEVNLDALGGISFKKGCYVGQETVARAKYRGTNKRRLVLLALDASLPEAGEEILAGGE 249 (305)
T ss_pred HHHHHCCCCCCC-CHHCCCCCHHHHCCCCCCCEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEECCCC
T ss_conf 999980898643-0002566822417110284711586636687766887628775169999817878999874422887
Q ss_pred E--EEEEEEEECCEEEEEEEHHHCCCCCCCCCEEEECCEEEEEECCCCC
Q ss_conf 9--6799983478336899813103665678648868889999748876
Q gi|254780591|r 226 E--IGTLGVVVGKKALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 (273)
Q Consensus 226 ~--VG~vtS~~~~~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~P~w~ 272 (273)
T Consensus 250 ~~~~G~v~s~~~~~~~~l~~l~~~---l~~~~~~~v~~~~~~~~~~~~~ 295 (305)
T COG0354 250 EVGLGTVLSAVGLGPVALIRLKVV---LDNGLAIDVGGRIANLALPPWV 295 (305)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHH---HCCCCHHHHCCCCCCCCCCCCC
T ss_conf 530466886356740257899876---2255312214521246666210