HHsearch alignment for GI: 254780591 and conserved domain: PRK13579
>PRK13579 gcvT glycine cleavage system aminomethyltransferase T; Provisional.
Probab=100.00 E-value=1.5e-41 Score=261.63 Aligned_cols=264 Identities=14% Similarity=0.065 Sum_probs=181.3
Q ss_pred EECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHH
Q ss_conf 76179407999875878786321326731089982689999979998899899997045552000033333456777643
Q gi|254780591|r 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLF 83 (273)
Q Consensus 4 ~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (273)
T Consensus 56 ~D~S~~~ki~I~G~DA~~fL~~l~t~dv~~l~~G~~~Yt~~Ln~~Ggi~~D~~v~rl~d~~~l~~~~~-~~~~~~~~l~~ 134 (371)
T PRK13579 56 FDVSHMGQIEVSGKDAAAALERLVPQDILALKEGRQRYTFFTNDQGGILDDLMVTNLGDHLFLVVNAA-CKDADIAHLRE 134 (371)
T ss_pred EECCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCEEEEEECCC-HHHHHHHHHHH
T ss_conf 95798489999878999999886153777789996899998879997877789998224167641212-28899999997
Q ss_pred HHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC-----------------------CCCCCHHHHHH---------
Q ss_conf 2100012235688436999971854322211123456-----------------------64441012221---------
Q gi|254780591|r 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFIDERF-----------------------SIADVLLHRTW--------- 131 (273)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~--------- 131 (273)
T Consensus 135 ~~~~-~v~v~~~~~-~~~l~lqGP~S~~vL~~l~~~~~~~~~~~~~~~~i~g~~~~i~R~g~tGE~G~Ei~~~~~~a~~l 212 (371)
T PRK13579 135 HLSD-ACEVNPLED-RALLALQGPKAEAVLADLCPPVAALRFMDGAEPRLHGVDCFVSRSGYTGEDGFEISVPADAAEAL 212 (371)
T ss_pred HCCC-CCEEEECCC-HHHHHHHCCHHHHHHHHHCCCHHHCCCCCCEEEEECCEEEEEEECCCCCCCEEEEEECHHHHHHH
T ss_conf 5788-877997865-42676629058999987489867775442149999997999993353689659999659999999
Q ss_pred -----CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE---CCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf -----013555579678888887520133456543221233100111220133---147521331013210012444347
Q gi|254780591|r 132 -----GHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGIS---LTKGCYIGQEVVSRIQHRNIIRKR 203 (273)
Q Consensus 132 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~k~~f~G~e~~~~~~~~~~~~~~ 203 (273)
T Consensus 213 ~~~l~~~~~~~p~G~~A~~~lRlE~G~~---~~G~Dl~~~~~P~EagL~~~v~~~k~~k~dFiGk~al~~~~~~g~~~kl 289 (371)
T PRK13579 213 AEALLADPRVEPIGLGARDSLRLEAGLC---LYGHDIDTTTDPVEAALEWAIQKARREAGGFPGAKAILAALAKGASRRR 289 (371)
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHCCCC---CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 9999974898662246460014432866---6563469999945776421536663555571579999999855976699
Q ss_pred EEEEECCCCCCCCCCEEEEC-CEEEEEEEEEECC------EEEEEEEHHHCCCCCCCCCEEEECCEEEEEECCCCCC
Q ss_conf 88740134566789887246-7796799983478------3368998131036656786488688899997488769
Q gi|254780591|r 204 PMIITGTDDLPPSGSPILTD-DIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 (273)
Q Consensus 204 ~~~~~~~~~~~~~g~~i~~~-g~~VG~vtS~~~~------~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~P~w~~ 273 (273)
T Consensus 290 vgl~~~~~~~~~~g~~v~~~~g~~VG~vTS~~~sp~l~k~Iala~v~~~~~~~G~~v~V~i~g~~~~a~V~~~PF~~ 366 (371)
T PRK13579 290 VGLKPEGRAPVREGADLFDDAGTPIGTVTSGGFGPSLGGPVAMGYVPASLAAPGTAVFAEVRGKRLPVTVHALPFVP 366 (371)
T ss_pred EEEEECCCCCCCCCCEEECCCCCEEEEECEEEEHHHCCEEEEEEEECHHHCCCCCEEEEEECCEEEEEEEECCCCCC
T ss_conf 99998688468999968938992599918151726488089999999778799988999999989999996889889