HHsearch results for GI: 254780591 and protein with PDBid: 1wsr_A
>1wsr_A Aminomethyltransferase; glycine-cleavage sytem; 2.00A {Homo sapiens} PDB: 1wsv_A*
Probab=100.00 E-value=6e-39 Score=245.16 Aligned_cols=267 Identities=10% Similarity=0.048 Sum_probs=186.9
Q ss_pred EECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHH
Q ss_conf 76179407999875878786321326731089982689999979998899899997045552000033333456777643
Q gi|254780591|r 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLF 83 (273)
Q Consensus 4 ~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (273)
+=+|++++|+|+|+||.+|||+++|||++++++|+++||+|||++|+|++|++|+|++++.|+++.++........++..
T Consensus 51 ~D~S~~~~i~V~G~Da~~fL~~l~t~di~~l~~g~~~y~~~ln~~G~i~~D~~v~r~~~~~~~l~~~~~~~~~~~~~l~~ 130 (375)
T 1wsr_A 51 FDVSHMLQTKILGSDRVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDLALMQD 130 (375)
T ss_dssp EECTTSEEEEEESTTHHHHHHHHBSSCCTTCCTTEEEEEEEECTTCCEEEEEEEEECTTSSEEEEECGGGHHHHHHHHHH
T ss_pred EECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHH
T ss_conf 96798489999858999999886145730047971799665058864898556432365037887130210034666544
Q ss_pred HHHCCCCC---CCCCCCCEEEEEECCCCCCCCCCCCCCC-------------------------CCCCCCHHH-------
Q ss_conf 21000122---3568843699997185432221112345-------------------------664441012-------
Q gi|254780591|r 84 YKLRSNVI---IEIQPINGVVLSWNQEHTFSNSSFIDER-------------------------FSIADVLLH------- 128 (273)
Q Consensus 84 ~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------------~~~~~~~~~------- 128 (273)
........ +.+.+.....++++||+++......... ....++..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~l~l~GP~s~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~r~g~tGe~g~ei~~~~~ 210 (375)
T 1wsr_A 131 KVRELQNQGRDVGLEVLDNALLALQGPTAAQVLQAGVADDLRKLPFMTSAVMEVFGVSGCRVTRCGYTGEDGVEISVPVA 210 (375)
T ss_dssp HHHHHHHTTCCCEEEECCCEEEEEESTTHHHHHHTTCSSCGGGCCTTBEEEEEETTEEEEEEESCCSSSSSEEEEEECHH
T ss_pred HHHHCCCCCCEEEEEECCEEEEEEECCCHHHHHHHCCCCHHHHCCCCEEHEEECCCCCCEEEEEECCCCCCEEEEEECHH
T ss_conf 45412576733667412448997048401355663053223305410000012058854799975257872148851577
Q ss_pred -------HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCC---CCCCCCCCCCCCCCCC
Q ss_conf -------221013555579678888887520133456543221233100111220133147---5213310132100124
Q gi|254780591|r 129 -------RTWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGISLTK---GCYIGQEVVSRIQHRN 198 (273)
Q Consensus 129 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k---~~f~G~e~~~~~~~~~ 198 (273)
...........+..+++..+.+.+.+.+..+..... .+......+.++..+ .+|.|++++.+....+
T Consensus 211 ~~~~~~~~l~~~~~~~~~G~~A~~~lRiEaG~~~~g~d~~~~~---~p~eagL~~~~~~~~~~~~~f~G~~al~~~~~~~ 287 (375)
T 1wsr_A 211 GAVHLATAILKNPEVKLAGLAARDSLRLEAGLCLYGNDIDEHT---TPVEGSLSWTLGKRRRAAMDFPGAKVIVPQLKGR 287 (375)
T ss_dssp HHHHHHHHHHTSTTEEECCHHHHHHHHHHTTCCCBTTTBCTTC---CTTTTTCGGGSCHHHHHHTCSTTHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCC---CHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 8799999998725545455245667888618463165548899---8421764235425746444727999999876259
Q ss_pred CCCEEEEEEECCCCCCCCCCEEEECCEEEEEEEEEECC------EEEEEEEHHHCCCCCCCCCEEEECCEEEEEECCCCC
Q ss_conf 44347887401345667898872467796799983478------336899813103665678648868889999748876
Q gi|254780591|r 199 IIRKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWY 272 (273)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~g~~i~~~g~~VG~vtS~~~~------~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~P~w~ 272 (273)
..++.+++..+..+++..++.++.+|+.||.|||+++| +||||++.++...+....+++..+..+++|..+||+
T Consensus 288 ~~~~~v~l~~~~~~~~~~~~v~~~dg~~VG~VTS~~~Sp~l~k~Iala~v~~~~~~~G~~l~V~~~g~~~~a~V~~~PF~ 367 (375)
T 1wsr_A 288 VQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCPSPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFV 367 (375)
T ss_dssp CSCEEEEEEESSSCCCTTCEEECTTSCEEEEEEEEEEETTTTEEEEEEEECGGGCSTTCEEEEEETTEEEEEEEECSCSS
T ss_pred CCEEEEEEECCCCCCCCCCCEEECCCEEEEEECEEEECHHCCEEEEEEEECHHHCCCCCEEEEEECCEEEEEEEECCCCC
T ss_conf 73489996325775579996694799189891618596552938999999977779998899999998999999489965
Q ss_pred C
Q ss_conf 9
Q gi|254780591|r 273 K 273 (273)
Q Consensus 273 ~ 273 (273)
.
T Consensus 368 p 368 (375)
T 1wsr_A 368 P 368 (375)
T ss_dssp C
T ss_pred C
T ss_conf 9