HHsearch results for GI: 254780591 and protein with PDBid: 3gir_A

>3gir_A Aminomethyltransferase; glycine cleavage system, aminotransferase, structural genomics; 1.60A {Bartonella henselae}
Probab=100.00  E-value=2.6e-40  Score=253.14  Aligned_cols=265  Identities=15%  Similarity=0.126  Sum_probs=190.7

Q ss_pred             EECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHH
Q ss_conf             76179407999875878786321326731089982689999979998899899997045552000033333456777643
Q gi|254780591|r    4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLF   83 (273)
Q Consensus         4 ~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~~~   83 (273)
                      +=+|+++.|+|+||||.+|||+++|||++++++|+++|++|||++|+|++|++|+|.+++.|+++.++........+...
T Consensus        79 ~D~S~~~~i~V~G~Da~~fL~~l~t~dv~~l~~g~~~y~~~ln~~G~i~~D~~v~~~~~d~~~l~~~~~~~~~~~~~~~~  158 (393)
T 3gir_A           79 FDISHMKLIAVEGPKAVEFLSYALPVDAALLKIGQSRYSYLLNERAGILDDLILTRLAECRFMLVANAGNAQADFAELEK  158 (393)
T ss_dssp             EECTTSEEEEEESTTHHHHHHHHSSSCTTTSCTTBEEEEEEECTTCCEEEEEEEEEEETTEEEEEECGGGHHHHHHHHHH
T ss_pred             EECCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCHHHHHHHHCC
T ss_conf             97898589999899999997233575664356796688768869998899999997266302576411012455554202


Q ss_pred             HHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC--------------------CCCCCCCCHHHH--------------
Q ss_conf             2100012235688436999971854322211123--------------------456644410122--------------
Q gi|254780591|r   84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------------------ERFSIADVLLHR--------------  129 (273)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------------~~~~~~~~~~~~--------------  129 (273)
                      ...  ++.+.+.++++..++++||+++.......                    .+....++..+.              
T Consensus       159 ~~~--~~~~~~~~~~~~~i~l~GP~s~~vl~~~~~~~~~~~~~~~~~~~~~v~i~R~g~tGE~G~Ei~~~~~~~~~l~~~  236 (393)
T 3gir_A          159 RAF--GFECQVIALERVLLALQGPQAAAVLADAGLPGNELLFMQGFEPQQDWFITRSGYTGEDGFEIALPIGCARALAEK  236 (393)
T ss_dssp             HTT--TSSCEEEECCCEEEEEESTTHHHHHHHTTCCCTTCCTTBEECSSTTCEEESCCSSSSSEEEEEECHHHHHHHHHH
T ss_pred             CCC--CCEEEEECCCHHCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHH
T ss_conf             367--876999426411010558378997553278611111000345775389992587887748996088999999999


Q ss_pred             HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE---ECCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             2101355557967888888752013345654322123310011122013---3147521331013210012444347887
Q gi|254780591|r  130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI---SLTKGCYIGQEVVSRIQHRNIIRKRPMI  206 (273)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~k~~f~G~e~~~~~~~~~~~~~~~~~  206 (273)
                      +.........+..+++..+.+.+.+.+..+.....   .+....+.+.+   ...|+||+||+++.+.+..+..++++++
T Consensus       237 L~~~~~~~~~G~~A~~~LRiEaG~~~~g~dl~~~~---tP~eagL~~~v~~~~~~k~~f~Gkeal~~~~~~g~~~~lvg~  313 (393)
T 3gir_A          237 LLGDSRVEWVGLAARDSLRLEAGLCLHGNDITPDT---TPIDAALTWAVPKNVREKAQFYGAKAFLESLQKGPSRCRVGL  313 (393)
T ss_dssp             HHTSTTEEECCHHHHHHHHHHTTCCCBTTTBCTTC---CTTTTTCGGGSCHHHHHHCCSTTHHHHHHHHHHCCSSEEEEE
T ss_pred             HHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC---CHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf             98554875026444233488649865466677878---821344433221353422020068999998752874378998


Q ss_pred             EECCCCCCCCCCEEE-ECCEEEEEEEEEECC------EEEEEEEHHHCCCCCCCCCEEEECCEEEEEECCCCCC
Q ss_conf             401345667898872-467796799983478------3368998131036656786488688899997488769
Q gi|254780591|r  207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK  273 (273)
Q Consensus       207 ~~~~~~~~~~g~~i~-~~g~~VG~vtS~~~~------~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~P~w~~  273 (273)
                      ....+.+++.+..++ .+|+.||+|||+++|      +||||++.++...+.+..+++..+-++++|+++||++
T Consensus       314 ~~~~~~~~~~g~~v~~~~g~~VG~VTS~~~Sp~l~k~Ialayv~~~~a~~G~~v~V~i~g~~~~a~V~~~PF~d  387 (393)
T 3gir_A          314 KPQTRQPIRAGAVLFDNEGNRIGVVTSGGFGPSFDGPVAMGYVPVAWKVEGTEVFTELRGKKIALSVHSLPFVE  387 (393)
T ss_dssp             EESSSSCCCTTCEEECTTSCEEEEEEEEEEETTTTEEEEEEEECGGGCSTTCEEEEEETTEEEEEEEECSCSSC
T ss_pred             EECCCCCCCCCCEEECCCCCEEEEECCEEECHHCCEEEEEEEECHHHCCCCCEEEEEECCEEEEEEEECCCCCC
T ss_conf             74688767899988848991898907076742049189999999778489998999999989999997789889