HHsearch results for GI: 254780591 and protein with PDBid: 3gir_A
>3gir_A Aminomethyltransferase; glycine cleavage system, aminotransferase, structural genomics; 1.60A {Bartonella henselae}
Probab=100.00 E-value=2.6e-40 Score=253.14 Aligned_cols=265 Identities=15% Similarity=0.126 Sum_probs=190.7
Q ss_pred EECCCCEEEEEECCCHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHHH
Q ss_conf 76179407999875878786321326731089982689999979998899899997045552000033333456777643
Q gi|254780591|r 4 VYLSNQSFIKVCGKSAIPFLQAIITADVLTLPYKIARGSAILTPQGKILLYFLISKIEEDTFILEIDRSKRDSLIDKLLF 83 (273)
Q Consensus 4 ~~L~~~~~i~i~G~DA~~fL~~l~t~di~~l~~g~~~yt~~ln~~G~i~~D~~i~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (273)
+=+|+++.|+|+||||.+|||+++|||++++++|+++|++|||++|+|++|++|+|.+++.|+++.++........+...
T Consensus 79 ~D~S~~~~i~V~G~Da~~fL~~l~t~dv~~l~~g~~~y~~~ln~~G~i~~D~~v~~~~~d~~~l~~~~~~~~~~~~~~~~ 158 (393)
T 3gir_A 79 FDISHMKLIAVEGPKAVEFLSYALPVDAALLKIGQSRYSYLLNERAGILDDLILTRLAECRFMLVANAGNAQADFAELEK 158 (393)
T ss_dssp EECTTSEEEEEESTTHHHHHHHHSSSCTTTSCTTBEEEEEEECTTCCEEEEEEEEEEETTEEEEEECGGGHHHHHHHHHH
T ss_pred EECCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCHHHHHHHHCC
T ss_conf 97898589999899999997233575664356796688768869998899999997266302576411012455554202
Q ss_pred HHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC--------------------CCCCCCCCHHHH--------------
Q ss_conf 2100012235688436999971854322211123--------------------456644410122--------------
Q gi|254780591|r 84 YKLRSNVIIEIQPINGVVLSWNQEHTFSNSSFID--------------------ERFSIADVLLHR-------------- 129 (273)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------------~~~~~~~~~~~~-------------- 129 (273)
... ++.+.+.++++..++++||+++....... .+....++..+.
T Consensus 159 ~~~--~~~~~~~~~~~~~i~l~GP~s~~vl~~~~~~~~~~~~~~~~~~~~~v~i~R~g~tGE~G~Ei~~~~~~~~~l~~~ 236 (393)
T 3gir_A 159 RAF--GFECQVIALERVLLALQGPQAAAVLADAGLPGNELLFMQGFEPQQDWFITRSGYTGEDGFEIALPIGCARALAEK 236 (393)
T ss_dssp HTT--TSSCEEEECCCEEEEEESTTHHHHHHHTTCCCTTCCTTBEECSSTTCEEESCCSSSSSEEEEEECHHHHHHHHHH
T ss_pred CCC--CCEEEEECCCHHCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHH
T ss_conf 367--876999426411010558378997553278611111000345775389992587887748996088999999999
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE---ECCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 2101355557967888888752013345654322123310011122013---3147521331013210012444347887
Q gi|254780591|r 130 TWGHNEKIASDIKTYHELRINHGIVDPNTDFLPSTIFPHDALMDLLNGI---SLTKGCYIGQEVVSRIQHRNIIRKRPMI 206 (273)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~k~~f~G~e~~~~~~~~~~~~~~~~~ 206 (273)
+.........+..+++..+.+.+.+.+..+..... .+....+.+.+ ...|+||+||+++.+.+..+..++++++
T Consensus 237 L~~~~~~~~~G~~A~~~LRiEaG~~~~g~dl~~~~---tP~eagL~~~v~~~~~~k~~f~Gkeal~~~~~~g~~~~lvg~ 313 (393)
T 3gir_A 237 LLGDSRVEWVGLAARDSLRLEAGLCLHGNDITPDT---TPIDAALTWAVPKNVREKAQFYGAKAFLESLQKGPSRCRVGL 313 (393)
T ss_dssp HHTSTTEEECCHHHHHHHHHHTTCCCBTTTBCTTC---CTTTTTCGGGSCHHHHHHCCSTTHHHHHHHHHHCCSSEEEEE
T ss_pred HHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC---CHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf 98554875026444233488649865466677878---821344433221353422020068999998752874378998
Q ss_pred EECCCCCCCCCCEEE-ECCEEEEEEEEEECC------EEEEEEEHHHCCCCCCCCCEEEECCEEEEEECCCCCC
Q ss_conf 401345667898872-467796799983478------3368998131036656786488688899997488769
Q gi|254780591|r 207 ITGTDDLPPSGSPIL-TDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK 273 (273)
Q Consensus 207 ~~~~~~~~~~g~~i~-~~g~~VG~vtS~~~~------~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~P~w~~ 273 (273)
....+.+++.+..++ .+|+.||+|||+++| +||||++.++...+.+..+++..+-++++|+++||++
T Consensus 314 ~~~~~~~~~~g~~v~~~~g~~VG~VTS~~~Sp~l~k~Ialayv~~~~a~~G~~v~V~i~g~~~~a~V~~~PF~d 387 (393)
T 3gir_A 314 KPQTRQPIRAGAVLFDNEGNRIGVVTSGGFGPSFDGPVAMGYVPVAWKVEGTEVFTELRGKKIALSVHSLPFVE 387 (393)
T ss_dssp EESSSSCCCTTCEEECTTSCEEEEEEEEEEETTTTEEEEEEEECGGGCSTTCEEEEEETTEEEEEEEECSCSSC
T ss_pred EECCCCCCCCCCEEECCCCCEEEEECCEEECHHCCEEEEEEEECHHHCCCCCEEEEEECCEEEEEEEECCCCCC
T ss_conf 74688767899988848991898907076742049189999999778489998999999989999997789889