HHSEARCH alignment of GI: 254780591 and SCOP domain: d1v5va1

Alignment
>d1v5va1 b.44.2.1 (A:313-401) Glycine cleavage system T protein, GcvT {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.07  E-value=2.5e-10  Score=76.71  Aligned_cols=73  Identities=14%  Similarity=0.178  Sum_probs=59.7

Q ss_pred             CEEEEEEECCCCCCCCCCEEEECCEEEEEEEEEECC------EEEEEEEHHHCCCCCCCCCEEEECCEEEEEECCCCCC
Q ss_conf             347887401345667898872467796799983478------3368998131036656786488688899997488769
Q gi|254780591|r  201 RKRPMIITGTDDLPPSGSPILTDDIEIGTLGVVVGK------KALAIARIDKVDHAIKKGMALTVHGVRVKASFPHWYK  273 (273)
Q Consensus       201 ~~~~~~~~~~~~~~~~g~~i~~~g~~VG~vtS~~~~------~gla~i~~~~~~~~~~~~~~l~~~~~~~~i~~P~w~~  273 (273)
                      ++++++....+.+++.|++|+.+|++||.|||+++|      +||||+..++...+....+++..+..++++..+|||+
T Consensus         1 rkLvGl~~~~~~i~~~g~~I~~~g~~VG~vTSg~~Sp~l~~~Iala~v~~~~~~~g~~v~v~i~g~~~~a~v~~~PfyD   79 (89)
T d1v5va1           1 RKLVHFKMIDKGIPREGYKVYANGEMIGEVTSGTLSPLLNVGIGIAFVKEEYAKPGIEIEVEIRGQRKKAVTVTPPFYD   79 (89)
T ss_dssp             EEEEEEEESSSCCCCTTCEEEETTEEEEEEEEEEECTTTCSEEEEEEEEGGGCSTTCEEEEEETTEEEEEEEECSCSSC
T ss_pred             CEEEEEEECCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEECHHHCCCCCEEEEEECCEEEEEEEECCCCCC
T ss_conf             9599999878756899998988999999982576988579549999998889699999999999949989997889948


SCOP domain information

class: All beta proteins
fold: Elongation factor/aminomethyltransferase common domain
superfamily: Aminomethyltransferase beta-barrel domain
family: Aminomethyltransferase beta-barrel domain
domain: Glycine cleavage system T protein, GcvT
species: Pyrococcus horikoshii [TaxId: 53953]