HHsearch alignment for GI: 254780592 and conserved domain: COG2909
>COG2909 MalT ATP-dependent transcriptional regulator [Transcription].
Probab=96.78 E-value=0.033 Score=31.22 Aligned_cols=154 Identities=20% Similarity=0.132 Sum_probs=67.6
Q ss_pred HHHHCCHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC------CHHHHHHHHHH
Q ss_conf 9842019999999999999575787-----999999999987410012446665566327521------00135555321
Q gi|254780592|r 46 NMNHEQLLEVTSTIGLQYQSHTKNK-----MIGIVYADVLRRVGRTAQALAVMRQVAILYPED------QEVLAAYGKSL 114 (271)
Q Consensus 46 ~~~~~~~~~A~~~~~~al~~~P~~~-----~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~ 114 (271)
T Consensus 468 al~~~~~e~a~~lar~al~~L~~~~~~~r~~~~sv~~~a~~~~G~~~~Al~~~~~a~~~a~~~~~~~l~~~~~~~~s~il 547 (894)
T COG2909 468 ALNRGDPEEAEDLARLALVQLPEAAYRSRIVALSVLGEAAHIRGELTQALALMQQAEQMARQHDVYHLALWSLLQQSEIL 547 (894)
T ss_pred HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 98458778999999999986612254000256540568888734399999988879999998044889999999999999
Q ss_pred HHHCC--HHHHHHHHHHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CHHH---HHHHHHHHH
Q ss_conf 00000--11258876422----11000023356699999997421111100000000000----0000---124577765
Q gi|254780592|r 115 ANAGY--LDEGLDAINRA----QRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELS----PNES---SIVSNIAMS 181 (271)
Q Consensus 115 ~~~g~--~~~A~~~~~~a----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~----p~~~---~~~~~~~~~ 181 (271)
T Consensus 548 ~~qGq~~~a~~~~~~~~~~~q~l~q~~~~~f~~~~r~~ll~~~~r~~~~~~ear~~~~~~~~~~~~~~~~~~~~~~LA~l 627 (894)
T COG2909 548 EAQGQVARAEQEKAFNLIREQHLEQKPRHEFLVRIRAQLLRAWLRLDLAEAEARLGIEVGSVYTPQPLLSRLALSMLAEL 627 (894)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 98307889988888777998876542532157889999999999886666776433004220363236799999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 433223554359999999
Q gi|254780592|r 182 YLLMGDLKTAEEKLRFAS 199 (271)
Q Consensus 182 ~~~~g~~~~A~~~~~~al 199 (271)
T Consensus 628 ~~~~Gdl~~A~~~l~~~~ 645 (894)
T COG2909 628 EFLRGDLDKALAQLDELE 645 (894)
T ss_pred HHHCCCHHHHHHHHHHHH
T ss_conf 875388888998999999