HHsearch alignment for GI: 254780592 and conserved domain: COG2909

>COG2909 MalT ATP-dependent transcriptional regulator [Transcription].
Probab=96.78  E-value=0.033  Score=31.22  Aligned_cols=154  Identities=20%  Similarity=0.132  Sum_probs=67.6

Q ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC------CHHHHHHHHHH
Q ss_conf             9842019999999999999575787-----999999999987410012446665566327521------00135555321
Q gi|254780592|r   46 NMNHEQLLEVTSTIGLQYQSHTKNK-----MIGIVYADVLRRVGRTAQALAVMRQVAILYPED------QEVLAAYGKSL  114 (271)
Q Consensus        46 ~~~~~~~~~A~~~~~~al~~~P~~~-----~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~  114 (271)
T Consensus       468 al~~~~~e~a~~lar~al~~L~~~~~~~r~~~~sv~~~a~~~~G~~~~Al~~~~~a~~~a~~~~~~~l~~~~~~~~s~il  547 (894)
T COG2909         468 ALNRGDPEEAEDLARLALVQLPEAAYRSRIVALSVLGEAAHIRGELTQALALMQQAEQMARQHDVYHLALWSLLQQSEIL  547 (894)
T ss_pred             HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             98458778999999999986612254000256540568888734399999988879999998044889999999999999


Q ss_pred             HHHCC--HHHHHHHHHHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC----CHHH---HHHHHHHHH
Q ss_conf             00000--11258876422----11000023356699999997421111100000000000----0000---124577765
Q gi|254780592|r  115 ANAGY--LDEGLDAINRA----QRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELS----PNES---SIVSNIAMS  181 (271)
Q Consensus       115 ~~~g~--~~~A~~~~~~a----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~----p~~~---~~~~~~~~~  181 (271)
T Consensus       548 ~~qGq~~~a~~~~~~~~~~~q~l~q~~~~~f~~~~r~~ll~~~~r~~~~~~ear~~~~~~~~~~~~~~~~~~~~~~LA~l  627 (894)
T COG2909         548 EAQGQVARAEQEKAFNLIREQHLEQKPRHEFLVRIRAQLLRAWLRLDLAEAEARLGIEVGSVYTPQPLLSRLALSMLAEL  627 (894)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             98307889988888777998876542532157889999999999886666776433004220363236799999999999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             433223554359999999
Q gi|254780592|r  182 YLLMGDLKTAEEKLRFAS  199 (271)
Q Consensus       182 ~~~~g~~~~A~~~~~~al  199 (271)
T Consensus       628 ~~~~Gdl~~A~~~l~~~~  645 (894)
T COG2909         628 EFLRGDLDKALAQLDELE  645 (894)
T ss_pred             HHHCCCHHHHHHHHHHHH
T ss_conf             875388888998999999