HHsearch alignment for GI: 254780592 and conserved domain: COG3898
>COG3898 Uncharacterized membrane-bound protein [Function unknown].
Probab=97.80 E-value=0.0022 Score=38.36 Aligned_cols=195 Identities=14% Similarity=0.035 Sum_probs=122.9
Q ss_pred HHCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHCCHHHHH
Q ss_conf 4201999999999999957578--799999999998741001244666556632752100-1355553210000011258
Q gi|254780592|r 48 NHEQLLEVTSTIGLQYQSHTKN--KMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQE-VLAAYGKSLANAGYLDEGL 124 (271)
Q Consensus 48 ~~~~~~~A~~~~~~al~~~P~~--~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~~~~g~~~~A~ 124 (271)
T Consensus 96 gAGda~lARkmt~~~~~llssDqepLIhlLeAQaal~eG~~~~Ar~kfeAM-l~dPEtRllGLRgLyleAqr~GareaAr 174 (531)
T COG3898 96 GAGDASLARKMTARASKLLSSDQEPLIHLLEAQAALLEGDYEDARKKFEAM-LDDPETRLLGLRGLYLEAQRLGAREAAR 174 (531)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 167568999999998765424645899999988988647618799999987-3683887776788999998602189999
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH--------HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8764221100002335669999999742111110000000000000001--------24577765433223554359999
Q gi|254780592|r 125 DAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELSPNESS--------IVSNIAMSYLLMGDLKTAEEKLR 196 (271)
Q Consensus 125 ~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~--------~~~~~~~~~~~~g~~~~A~~~~~ 196 (271)
T Consensus 175 ~yAe~Aa~~Ap~l~WA~~AtLe~r~~~gdWd~AlkLvd~~~~~~vie~~~aeR~rAvLLtAkA~s~l-dadp~~Ar~~A~ 253 (531)
T COG3898 175 HYAERAAEKAPQLPWAARATLEARCAAGDWDGALKLVDAQRAAKVIEKDVAERSRAVLLTAKAMSLL-DADPASARDDAL 253 (531)
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHH
T ss_conf 9999987636677167999999998667868899999988887752611677898999988888772-488677889999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 9995389854788899999998699899999999862917286659999
Q gi|254780592|r 197 FASQMIGADSRIRQNLALVVGLQGRMKEAYSIASQELSPEEATRNIKYI 245 (271)
Q Consensus 197 ~al~~~p~~~~~~~~La~~~~~~g~~~eA~~~~~~~L~~~~~~~~~~~l 245 (271)
T Consensus 254 ~a~KL~pdlvPaav~AAralf~d~~~rKg~~ilE~aWK~eP-HP~ia~l 301 (531)
T COG3898 254 EANKLAPDLVPAAVVAARALFRDGNLRKGSKILETAWKAEP-HPDIALL 301 (531)
T ss_pred HHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC-CHHHHHH
T ss_conf 87503876336999999998742462433248899873499-8489999