HHsearch alignment for GI: 254780592 and conserved domain: COG4259
>COG4259 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=95.42 E-value=0.16 Score=27.01 Aligned_cols=94 Identities=14% Similarity=0.152 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCC----CHHHHHHHHHHH-----CCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHH
Q ss_conf 98999999999999985403685433----117999999842-----01999999999999957-578799999999998
Q gi|254780592|r 12 LKKIKCIVFLIPLLLFSSCHLNPRIS----IPDPESLENMNH-----EQLLEVTSTIGLQYQSH-TKNKMIGIVYADVLR 81 (271)
Q Consensus 12 ~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-----~~~~~A~~~~~~al~~~-P~~~~~~~~~a~~l~ 81 (271)
T Consensus 4 ~ktlsr~al~~av~~LagC~~gpKslY~w~gYq~tvyEy~K~~es~e~Q~~~le~~~ek~~ak~~~vpPG~HAhLGlLys 83 (121)
T COG4259 4 LKTLSRLALLLAVAALAGCGGGPKSLYQWEGYQDTVYEYFKGDESKEAQTAALEKYLEKIGAKNGAVPPGYHAHLGLLYS 83 (121)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 48899999999999998805798641013786389999981788788999999999999751489999727888777886
Q ss_pred HHHCCHHHHHHHHHHHHCCCCCCH
Q ss_conf 741001244666556632752100
Q gi|254780592|r 82 RVGRTAQALAVMRQVAILYPEDQE 105 (271)
Q Consensus 82 ~~g~~~~A~~~~~~al~~~p~~~~ 105 (271)
T Consensus 84 ~~G~~e~a~~eFetEKalFPES~~ 107 (121)
T COG4259 84 NSGKDEQAVREFETEKALFPESGV 107 (121)
T ss_pred HCCCHHHHHHHHHHHHHHCCCCHH
T ss_conf 049828999999876640766016