HHsearch alignment for GI: 254780592 and conserved domain: COG5010
>COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].
Probab=99.53 E-value=1.2e-12 Score=95.27 Aligned_cols=152 Identities=20% Similarity=0.164 Sum_probs=117.6
Q ss_pred HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 98420199999999999995757879999999999874100124466655663275210013555532100000112588
Q gi|254780592|r 46 NMNHEQLLEVTSTIGLQYQSHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEGLD 125 (271)
Q Consensus 46 ~~~~~~~~~A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~ 125 (271)
T Consensus 76 ~~~~G~a~~~l~~~~~~~~~~~~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~d~~~~~~lgaaldq~Gr~~~Ar~ 155 (257)
T COG5010 76 LYLRGDADSSLAVLQKSAIAYPKDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPTDWEAWNLLGAALDQLGRFDEARR 155 (257)
T ss_pred HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 77405555007887554014745499999999999980456889999999843699974666677899997367567789
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 764221100002335669999999742111110000000000000001245777654332235543599999
Q gi|254780592|r 126 AINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRF 197 (271)
Q Consensus 126 ~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 197 (271)
T Consensus 156 ay~qAl~L~~~~p~~~nNlgms~~L~gd~~~A~~lll~a~l~~~ad~~v~~NLAl~~~~~g~~~~A~~i~~~ 227 (257)
T COG5010 156 AYRQALELAPNEPSIANNLGMSLLLRGDLEDAETLLLPAYLSPAADSRVRQNLALVVGLQGDFREAEDIAVQ 227 (257)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCC
T ss_conf 999999842588446665899999727798999999999867887638999899998404886777762420