HHsearch alignment for GI: 254780592 and conserved domain: PRK02603
>PRK02603 photosystem I assembly protein Ycf3; Provisional.
Probab=99.50 E-value=1.3e-13 Score=101.09 Aligned_cols=120 Identities=22% Similarity=0.218 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 112588764221100002--335669999999742111110000000000000001---245777654332235543599
Q gi|254780592|r 120 LDEGLDAINRAQRPDIPD--WQLISAKGSVLAQMGKHSEALIEYERALELSPNESS---IVSNIAMSYLLMGDLKTAEEK 194 (271)
Q Consensus 120 ~~~A~~~~~~a~~~~p~~--~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~---~~~~~~~~~~~~g~~~~A~~~ 194 (271)
T Consensus 15 ftv~ad~~~k~~p~~~~~k~A~~Yy~~G~~~q~~G~Y~EAle~Y~kAL~Le~dp~D~s~ilyNiGlIY~~~G~~~kAie~ 94 (172)
T PRK02603 15 FTVMADLILKILPINKKAKEAFVYYRDGMSAQNDGDYAEALENYEEALKLEEDPNDRSYILYNMAIIYASNGEHDKALET 94 (172)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 89999999998158863368999997225777457999999999998727789620899997799999986998899999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHCCCCCCC
Q ss_conf 999995389854788899999998699--------------899999999862917286
Q gi|254780592|r 195 LRFASQMIGADSRIRQNLALVVGLQGR--------------MKEAYSIASQELSPEEAT 239 (271)
Q Consensus 195 ~~~al~~~p~~~~~~~~La~~~~~~g~--------------~~eA~~~~~~~L~~~~~~ 239 (271)
T Consensus 95 Y~kALeiNP~~~~AlNNlgvIY~k~G~~a~~~~~~~~~~~~fdkAa~yw~kAI~l~P~n 153 (172)
T PRK02603 95 YHQALELNPKQPSALNNIAVIYHKRGRKAEEAGDQDEAEAWFDKAAEYWKQAIRLAPNN 153 (172)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999868997899999999999985999984587789999999999999988509987