HHsearch alignment for GI: 254780592 and conserved domain: PRK02603

>PRK02603 photosystem I assembly protein Ycf3; Provisional.
Probab=99.50  E-value=1.3e-13  Score=101.09  Aligned_cols=120  Identities=22%  Similarity=0.218  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf             112588764221100002--335669999999742111110000000000000001---245777654332235543599
Q gi|254780592|r  120 LDEGLDAINRAQRPDIPD--WQLISAKGSVLAQMGKHSEALIEYERALELSPNESS---IVSNIAMSYLLMGDLKTAEEK  194 (271)
Q Consensus       120 ~~~A~~~~~~a~~~~p~~--~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~---~~~~~~~~~~~~g~~~~A~~~  194 (271)
T Consensus        15 ftv~ad~~~k~~p~~~~~k~A~~Yy~~G~~~q~~G~Y~EAle~Y~kAL~Le~dp~D~s~ilyNiGlIY~~~G~~~kAie~   94 (172)
T PRK02603         15 FTVMADLILKILPINKKAKEAFVYYRDGMSAQNDGDYAEALENYEEALKLEEDPNDRSYILYNMAIIYASNGEHDKALET   94 (172)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             89999999998158863368999997225777457999999999998727789620899997799999986998899999


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHCCC--------------HHHHHHHHHHHCCCCCCC
Q ss_conf             999995389854788899999998699--------------899999999862917286
Q gi|254780592|r  195 LRFASQMIGADSRIRQNLALVVGLQGR--------------MKEAYSIASQELSPEEAT  239 (271)
Q Consensus       195 ~~~al~~~p~~~~~~~~La~~~~~~g~--------------~~eA~~~~~~~L~~~~~~  239 (271)
T Consensus        95 Y~kALeiNP~~~~AlNNlgvIY~k~G~~a~~~~~~~~~~~~fdkAa~yw~kAI~l~P~n  153 (172)
T PRK02603         95 YHQALELNPKQPSALNNIAVIYHKRGRKAEEAGDQDEAEAWFDKAAEYWKQAIRLAPNN  153 (172)
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999868997899999999999985999984587789999999999999988509987