HHsearch alignment for GI: 254780592 and conserved domain: PRK04841
>PRK04841 transcriptional regulator MalT; Provisional.
Probab=97.63 E-value=0.004 Score=36.78 Aligned_cols=84 Identities=20% Similarity=0.201 Sum_probs=37.0
Q ss_pred HHHCCHHHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC------HHHHHHHHHHH
Q ss_conf 8420199999999999995757879-----999999999874100124466655663275210------01355553210
Q gi|254780592|r 47 MNHEQLLEVTSTIGLQYQSHTKNKM-----IGIVYADVLRRVGRTAQALAVMRQVAILYPEDQ------EVLAAYGKSLA 115 (271)
Q Consensus 47 ~~~~~~~~A~~~~~~al~~~P~~~~-----~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~------~~~~~~~~~~~ 115 (271)
T Consensus 463 ~~~~~~~~a~~~a~~al~~l~~~~~~~~~~~~~~l~~~~~~~G~l~~a~~~~~~a~~~~~~~~~~~~~~~~~~~~a~i~~ 542 (903)
T PRK04841 463 INDGDPEEAERLAKLALAELPLTWYYSRIVATSVLGEVHHCKGELARALAMMQQTEQMARQHDVYHYALWSLLQQSEILF 542 (903)
T ss_pred HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 85899999999999997536763479899999999999997799999999999999999983853579999999999999
Q ss_pred HHCCHHHHHHHHHHH
Q ss_conf 000011258876422
Q gi|254780592|r 116 NAGYLDEGLDAINRA 130 (271)
Q Consensus 116 ~~g~~~~A~~~~~~a 130 (271)
T Consensus 543 ~~G~l~~A~~~~~~a 557 (903)
T PRK04841 543 AQGFLQAAYETQEKA 557 (903)
T ss_pred HCCCHHHHHHHHHHH
T ss_conf 787899999999999