HHsearch alignment for GI: 254780592 and conserved domain: PRK10049

>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=99.49  E-value=2.3e-11  Score=87.31  Aligned_cols=194  Identities=13%  Similarity=0.076  Sum_probs=121.9

Q ss_pred             CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             33117999999842019999999999999575787999999999987410012446665566327521001355553210
Q gi|254780592|r   36 ISIPDPESLENMNHEQLLEVTSTIGLQYQSHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLA  115 (271)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~  115 (271)
T Consensus        31 ~d~~yd~~Ii~AR~G~~~~al~~L~~~~~~~~~~~~~v~D~l~i~sWag~d~~v~~~~~~~~~~~~lp~~~l~~~Aka~R  110 (818)
T PRK10049         31 ADTAYDALIIEARAGDTAPALSWLQQKSKAGALSNGQVADWLQIALWAGQDQEVITVYERYQSHMQLPARGLAAAARAYR  110 (818)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf             25689999999864882368999998753387667889889999853477779999999618888899799999999986


Q ss_pred             HHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             00001125887642211000023356699999997421111100000000000000012457776543322355435999
Q gi|254780592|r  116 NAGYLDEGLDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKL  195 (271)
Q Consensus       116 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~  195 (271)
T Consensus       111 n~kq~~~Al~ly~~~~~~~P~n~d~~lGlalt~Ada~~~~~Al~~~~~~~~~~p~~~~-~~~~aY~~~~~~~~~~aL~~~  189 (818)
T PRK10049        111 NLKQWQNSLTLWQKALSLEPQNKDYQSGQILTLADAGHYDEALVKAKQLVAGAPDVAN-LLALAYIYRLAGRHYDALRAM  189 (818)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHCCCCHHHHHHH
T ss_conf             3554677999999985029999407899999998638869999999998762897678-999999998627429999999


Q ss_pred             HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             99995389854788899999998699899999999
Q gi|254780592|r  196 RFASQMIGADSRIRQNLALVVGLQGRMKEAYSIAS  230 (271)
Q Consensus       196 ~~al~~~p~~~~~~~~La~~~~~~g~~~eA~~~~~  230 (271)
T Consensus       190 ~~al~~~P~~~~~~~~y~~al~~~~i~~pA~~l~~  224 (818)
T PRK10049        190 TEALRRAPSSQEVLTEYVQALQRNRIAAPALRLAK  224 (818)
T ss_pred             HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             99997689998999999999986699718999765