HHsearch alignment for GI: 254780592 and conserved domain: PRK10049
>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=99.49 E-value=2.3e-11 Score=87.31 Aligned_cols=194 Identities=13% Similarity=0.076 Sum_probs=121.9
Q ss_pred CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 33117999999842019999999999999575787999999999987410012446665566327521001355553210
Q gi|254780592|r 36 ISIPDPESLENMNHEQLLEVTSTIGLQYQSHTKNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLA 115 (271)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 115 (271)
T Consensus 31 ~d~~yd~~Ii~AR~G~~~~al~~L~~~~~~~~~~~~~v~D~l~i~sWag~d~~v~~~~~~~~~~~~lp~~~l~~~Aka~R 110 (818)
T PRK10049 31 ADTAYDALIIEARAGDTAPALSWLQQKSKAGALSNGQVADWLQIALWAGQDQEVITVYERYQSHMQLPARGLAAAARAYR 110 (818)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 25689999999864882368999998753387667889889999853477779999999618888899799999999986
Q ss_pred HHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00001125887642211000023356699999997421111100000000000000012457776543322355435999
Q gi|254780592|r 116 NAGYLDEGLDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKL 195 (271)
Q Consensus 116 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~ 195 (271)
T Consensus 111 n~kq~~~Al~ly~~~~~~~P~n~d~~lGlalt~Ada~~~~~Al~~~~~~~~~~p~~~~-~~~~aY~~~~~~~~~~aL~~~ 189 (818)
T PRK10049 111 NLKQWQNSLTLWQKALSLEPQNKDYQSGQILTLADAGHYDEALVKAKQLVAGAPDVAN-LLALAYIYRLAGRHYDALRAM 189 (818)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHCCCCHHHHHHH
T ss_conf 3554677999999985029999407899999998638869999999998762897678-999999998627429999999
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 99995389854788899999998699899999999
Q gi|254780592|r 196 RFASQMIGADSRIRQNLALVVGLQGRMKEAYSIAS 230 (271)
Q Consensus 196 ~~al~~~p~~~~~~~~La~~~~~~g~~~eA~~~~~ 230 (271)
T Consensus 190 ~~al~~~P~~~~~~~~y~~al~~~~i~~pA~~l~~ 224 (818)
T PRK10049 190 TEALRRAPSSQEVLTEYVQALQRNRIAAPALRLAK 224 (818)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 99997689998999999999986699718999765