HHsearch alignment for GI: 254780592 and conserved domain: PRK10866
>PRK10866 outer membrane protein assembly complex subunit YfiO; Provisional.
Probab=99.51 E-value=6.7e-12 Score=90.58 Aligned_cols=197 Identities=10% Similarity=0.052 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHCCCCCC------CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH---HHHHHHHHHHHHHCCHH
Q ss_conf 9999999998540368543------31179999998420199999999999995757879---99999999987410012
Q gi|254780592|r 18 IVFLIPLLLFSSCHLNPRI------SIPDPESLENMNHEQLLEVTSTIGLQYQSHTKNKM---IGIVYADVLRRVGRTAQ 88 (271)
Q Consensus 18 ~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~P~~~~---~~~~~a~~l~~~g~~~~ 88 (271)
T Consensus 8 ~~~~~l~l~l~gCs~~~~~~~~~~~~~~Y~~A~~~~~~~~y~~A~~~fe~l~~~yP~s~~A~qA~L~~ayayy~~~~y~~ 87 (243)
T PRK10866 8 VAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPL 87 (243)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 99999999998768998888899999999999999987899999999999998689976789999999999873077899
Q ss_pred HHHHHHHHHHCCCCCCHH---HHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 446665566327521001---35555321000001125887642211000023356699999997421111100000000
Q gi|254780592|r 89 ALAVMRQVAILYPEDQEV---LAAYGKSLANAGYLDEGLDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERAL 165 (271)
Q Consensus 89 A~~~~~~al~~~p~~~~~---~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~ 165 (271)
T Consensus 88 A~~~~~rFi~lyP~~~~v~Ya~Yl~gl~~~~~~--~~~~~~~~~~---~~~~-----------rD~~~~~~A~~~f~~li 151 (243)
T PRK10866 88 AQAAIDRFMRLNPTHPNIDYVMYMRGLTNMALD--DSALQGFFGV---DRSD-----------RDPQHARAAFSDFSKLV 151 (243)
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC--HHHHHHHHCC---CHHH-----------CCHHHHHHHHHHHHHHH
T ss_conf 999999999867899973899999889877401--3588887432---5643-----------07699999999999999
Q ss_pred CCCCHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHCCCHHHH
Q ss_conf 0000000-----------------124577765433223554359999999538985---47888999999986998999
Q gi|254780592|r 166 ELSPNES-----------------SIVSNIAMSYLLMGDLKTAEEKLRFASQMIGAD---SRIRQNLALVVGLQGRMKEA 225 (271)
Q Consensus 166 ~~~p~~~-----------------~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~La~~~~~~g~~~eA 225 (271)
T Consensus 152 ~~yP~S~Ya~dA~~r~~~lrn~LA~~El~Va~fY~kr~~y~AAi~R~~~vi~~Yp~t~~~~eAL~~l~eaY~~Lgl~~~A 231 (243)
T PRK10866 152 RGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQLNAQA 231 (243)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH
T ss_conf 87899845899999999999999999999999999926569999999999976899963399999999999986997899
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780592|r 226 YSIAS 230 (271)
Q Consensus 226 ~~~~~ 230 (271)
T Consensus 232 ~~~~~ 236 (243)
T PRK10866 232 DKVAK 236 (243)
T ss_pred HHHHH
T ss_conf 99999