HHsearch alignment for GI: 254780592 and conserved domain: PRK11906
>PRK11906 transcriptional regulator; Provisional.
Probab=97.76 E-value=8.6e-05 Score=47.01 Aligned_cols=145 Identities=12% Similarity=0.085 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHCCC---CCCHHHHHHHHHHHHH---CCH------HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 124466655663275---2100135555321000---001------1258876422110000233566999999974211
Q gi|254780592|r 87 AQALAVMRQVAILYP---EDQEVLAAYGKSLANA---GYL------DEGLDAINRAQRPDIPDWQLISAKGSVLAQMGKH 154 (271)
Q Consensus 87 ~~A~~~~~~al~~~p---~~~~~~~~~~~~~~~~---g~~------~~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~ 154 (271)
T Consensus 275 ~rAl~if~~~~n~s~~q~~~t~~Yc~LAEChlSlAl~G~se~e~A~~kA~e~~d~a~~i~~~n~qaLgllgLIsgL~~q~ 354 (458)
T PRK11906 275 YRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQA 354 (458)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH
T ss_conf 99999999874167887566665011999999999846227889999999999998836777767889999986134236
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH-HHHCCCHHHHHHHHHH
Q ss_conf 1110000000000000001245777654332235543599999995389854788899999-9986998999999998
Q gi|254780592|r 155 SEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGADSRIRQNLALV-VGLQGRMKEAYSIASQ 231 (271)
Q Consensus 155 ~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~La~~-~~~~g~~~eA~~~~~~ 231 (271)
T Consensus 355 ~Vs~~LFeQA~ll~p~s~di~yy~~~~~F~~g~leea~~~I~ksL~leP~r~~a~i~k~~v~~y~~~p~~n~i~~~~~ 432 (458)
T PRK11906 355 KVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 (458)
T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 698999987414699863312133353563374088999999986149401002456777651269985212678763