HHsearch alignment for GI: 254780592 and conserved domain: PRK12370
>PRK12370 invasion protein regulator; Provisional.
Probab=99.61 E-value=2.3e-13 Score=99.53 Aligned_cols=189 Identities=12% Similarity=0.014 Sum_probs=169.5
Q ss_pred HHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 842019999999999999575787999999999987410---------01244666556632752100135555321000
Q gi|254780592|r 47 MNHEQLLEVTSTIGLQYQSHTKNKMIGIVYADVLRRVGR---------TAQALAVMRQVAILYPEDQEVLAAYGKSLANA 117 (271)
Q Consensus 47 ~~~~~~~~A~~~~~~al~~~P~~~~~~~~~a~~l~~~g~---------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~ 117 (271)
T Consensus 272 ft~edn~~A~~LF~~Av~~dP~fA~AyA~la~cy~q~a~l~~~d~~~~~~~A~~~AeravEldp~dp~a~~~lg~~~~L~ 351 (553)
T PRK12370 272 YTPYSLQQALKLLTQCVNMSPNSIAPYCALAECYLSMAQMGIFDKQNAMIKAKEHAIKATELDHNNPQALGLLGLINTIH 351 (553)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
T ss_conf 18877999999999987339774466787899999763403688288999999999998743878878889999998723
Q ss_pred CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00112588764221100002335669999999742111110000000000000001245777654332235543599999
Q gi|254780592|r 118 GYLDEGLDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRF 197 (271)
Q Consensus 118 g~~~~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 197 (271)
T Consensus 352 ~d~~~a~~~f~rA~~L~Pnsa~~~Y~~~W~~~maGr~~ea~~~i~~a~~LdP~~~~~~~~~l~~~~~~~~~d~a~~l~~~ 431 (553)
T PRK12370 352 SEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWITYYHTGIDDAIRLGDE 431 (553)
T ss_pred CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 55224479998764259984257999999999758689999999998835986520279999999984231079999998
Q ss_pred HHHCCCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 99538985-4788899999998699899999999862917
Q gi|254780592|r 198 ASQMIGAD-SRIRQNLALVVGLQGRMKEAYSIASQELSPE 236 (271)
Q Consensus 198 al~~~p~~-~~~~~~La~~~~~~g~~~eA~~~~~~~L~~~ 236 (271)
T Consensus 432 ~~~q~~~~~~~~~s~~~m~~~~~g~~~~a~~~~~~-~~~~ 470 (553)
T PRK12370 432 LRSQHLQDNPILLSMQVMFLSLKGKHELARKLTKE-ISTQ 470 (553)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH-CCHH
T ss_conf 62507787836999999999733838999999985-1803