>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795).

Probab=99.68 E-value=4.9e-14 Score=103.68 Aligned_cols=197 Identities=15% Similarity=0.053 Sum_probs=146.9 Q ss_pred HHHHHHHHHHHHHHHCCCCCCC----------CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHH Q ss_conf 9999999999985403685433----------117999999842019999999999999575787---999999999987 Q gi|254780592|r 16 KCIVFLIPLLLFSSCHLNPRIS----------IPDPESLENMNHEQLLEVTSTIGLQYQSHTKNK---MIGIVYADVLRR 82 (271) Q Consensus 16 ~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~A~~~~~~al~~~P~~~---~~~~~~a~~l~~ 82 (271) T Consensus 3 ~~~~~~~~~~~l~sCs~~~~~~~~~~~~~~~~~lY~~a~~~~~~~~y~~A~~~fe~l~~~yp~s~~a~~A~l~~a~a~y~ 82 (235) T TIGR03302 3 LLILLLALLLLLAGCSSKKKKEADPVEERPAEELYNEAKEALDSGDYTEAIKYFEALESRYPFSPYAEQAQLDLAYAYYK 82 (235) T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH T ss_conf 99999999999987389976655555578999999999999987899999999999998689931379999999999997 Q ss_pred HHCCHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHH--------CCHHHHHHHHHHHHHHHCHHHHHH---HHHHHHH Q ss_conf 4100124466655663275210---0135555321000--------001125887642211000023356---6999999 Q gi|254780592|r 83 VGRTAQALAVMRQVAILYPEDQ---EVLAAYGKSLANA--------GYLDEGLDAINRAQRPDIPDWQLI---SAKGSVL 148 (271) Q Consensus 83 ~g~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~--------g~~~~A~~~~~~a~~~~p~~~~~~---~~lg~~~ 148 (271) T Consensus 83 ~~~y~~A~~~~~~Fi~~yP~~~~~~ya~y~~a~s~~~~~~~~~rDq~~~~~A~~~f~~~i~~yP~S~ya~dA~~~i~~l~ 162 (235) T TIGR03302 83 SGDYAEAIAAADRFIRLHPNHPDADYAYYLRGLSNYKQIDDSDRDQTAAREAFEAFQELIRRYPNSEYAPDAKKRMDYLR 162 (235) T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH T ss_conf 64399999999999998877434999999987998873665445808999999999999988899657999999999999 Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHCCCHHHH Q ss_conf 974211111000000000000000124577765433223554359999999538985---47888999999986998999 Q gi|254780592|r 149 AQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGAD---SRIRQNLALVVGLQGRMKEA 225 (271) Q Consensus 149 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---~~~~~~La~~~~~~g~~~eA 225 (271) T Consensus 163 ~~LA--------------------~~e~~ia~~Y~k~~~y~aAi~r~~~vl~~Yp~t~~~~eAl~~l~eay~~lg~~~~A 222 (235) T TIGR03302 163 NRLA--------------------GKELYVARFYLKRGAYVAAINRFETVVENYPDTPATEEALARLVEAYLALGLTDLA 222 (235) T ss_pred HHHH--------------------HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH T ss_conf 9999--------------------99999999999841709999999999986899851399999999999986998999 Q ss_pred HHHHHHH Q ss_conf 9999986 Q gi|254780592|r 226 YSIASQE 232 (271) Q Consensus 226 ~~~~~~~ 232 (271) T Consensus 223 ~~~~~~l 229 (235) T TIGR03302 223 QDAAAVL 229 (235) T ss_pred HHHHHHH T ss_conf 9999999

HHsearch alignment for GI: 254780592 and conserved domain: TIGR03302