>TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795).

Probab=98.72 E-value=1.4e-06 Score=58.00 Aligned_cols=166 Identities=11% Similarity=-0.067 Sum_probs=116.2 Q ss_pred CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHH---HHH Q ss_conf 7879999999999874100124466655663275210---0135555321000001125887642211000023---356 Q gi|254780592|r 68 KNKMIGIVYADVLRRVGRTAQALAVMRQVAILYPEDQ---EVLAAYGKSLANAGYLDEGLDAINRAQRPDIPDW---QLI 141 (271) Q Consensus 68 ~~~~~~~~~a~~l~~~g~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~---~~~ 141 (271) T Consensus 31 ~~~~~lY~~a~~~~~~~~y~~A~~~fe~l~~~yp~s~~a~~A~l~~a~a~y~~~~y~~A~~~~~~Fi~~yP~~~~~~ya~ 110 (235) T TIGR03302 31 RPAEELYNEAKEALDSGDYTEAIKYFEALESRYPFSPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYAY 110 (235) T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH T ss_conf 89999999999999878999999999999986899313799999999999976439999999999999887743499999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH------------- Q ss_conf 6999999974211111000000000000000124577765433223554359999999538985478------------- Q gi|254780592|r 142 SAKGSVLAQMGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGADSRI------------- 208 (271) Q Consensus 142 ~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~------------- 208 (271) T Consensus 111 y~~a~s~~~~~~----------------~----------~~rDq~~~~~A~~~f~~~i~~yP~S~ya~dA~~~i~~l~~~ 164 (235) T TIGR03302 111 YLRGLSNYKQID----------------D----------SDRDQTAAREAFEAFQELIRRYPNSEYAPDAKKRMDYLRNR 164 (235) T ss_pred HHHHHHHHHHCC----------------C----------CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH T ss_conf 998799887366----------------5----------44580899999999999998889965799999999999999 Q ss_pred ----HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCH---HHHHHHHHHHHHHHHHHHH Q ss_conf ----88999999986998999999998629172866---5999999998321299999 Q gi|254780592|r 209 ----RQNLALVVGLQGRMKEAYSIASQELSPEEATR---NIKYIKSILSQRDPWKKIA 259 (271) Q Consensus 209 ----~~~La~~~~~~g~~~eA~~~~~~~L~~~~~~~---~~~~l~~~l~~~~~~~~~a 259 (271) T Consensus 165 LA~~e~~ia~~Y~k~~~y~aAi~r~~~vl~~Yp~t~~~~eAl~~l~eay~~lg~~~~A 222 (235) T TIGR03302 165 LAGKELYVARFYLKRGAYVAAINRFETVVENYPDTPATEEALARLVEAYLALGLTDLA 222 (235) T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHH T ss_conf 9999999999999841709999999999986899851399999999999986998999

HHsearch alignment for GI: 254780592 and conserved domain: TIGR03302