HHsearch alignment for GI: 254780592 and conserved domain: pfam06552

>pfam06552 TOM20_plant Plant specific mitochondrial import receptor subunit TOM20. This family consists of several plant specific mitochondrial import receptor subunit TOM20 (translocase of outer membrane 20 kDa subunit) proteins. Most mitochondrial proteins are encoded by the nuclear genome, and are synthesized in the cytosol. TOM20 is a general import receptor that binds to mitochondrial pre-sequences in the early step of protein import into the mitochondria.
Probab=97.10  E-value=0.0013  Score=39.88  Aligned_cols=104  Identities=17%  Similarity=0.174  Sum_probs=55.9

Q ss_pred             CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             00124466655663275210013555532100000112588764221100002335669999999742111110000000
Q gi|254780592|r   85 RTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEGLDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEALIEYERA  164 (271)
Q Consensus        85 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~~  164 (271)
T Consensus         6 fFE~aRk~AE~~y~~nP~DadnLtRWGGALLELsqFq~~~d------------------------s~~Mi~dAisKlEeA   61 (186)
T pfam06552         6 FFEHARKSAEATYKKNPLDADNLTRWGGALLELSQFQSVPD------------------------AKKMIQDAISKLEEA   61 (186)
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH------------------------HHHHHHHHHHHHHHH
T ss_conf             99999999999885298458889888899999986126447------------------------999999999999998


Q ss_pred             CCCCCHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             00000000124577765433-----------2235543599999995389854788899
Q gi|254780592|r  165 LELSPNESSIVSNIAMSYLL-----------MGDLKTAEEKLRFASQMIGADSRIRQNL  212 (271)
Q Consensus       165 ~~~~p~~~~~~~~~~~~~~~-----------~g~~~~A~~~~~~al~~~p~~~~~~~~L  212 (271)
T Consensus        62 L~InP~khdalWclGNA~TS~~Fl~pD~~~A~~~F~kA~~~Fq~AvdeeP~NelYrKsL  120 (186)
T pfam06552        62 LVINPKKHDALWCIGNAYTSHAFLTPDQTEAKDNFDKATQFFQQAVDEQPDNDLYRKSL  120 (186)
T ss_pred             HCCCCCCCCHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             71398875333300541101513178789999889999999999863498618999999