HHsearch alignment for GI: 254780592 and conserved domain: pfam09295
>pfam09295 ChAPs ChAPs (Chs5p-Arf1p-binding proteins). ChAPs (Chs5p-Arf1p-binding proteins) are required for the export of specialized cargo from the Golgi. They physically interact with Chs3, Chs5 and the small GTPase Arf1, and they form also interactions with each other.
Probab=98.60 E-value=4.4e-07 Score=61.07 Aligned_cols=118 Identities=19% Similarity=0.216 Sum_probs=92.2
Q ss_pred HHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99987410012446665566327521001355553210000011258876422110000233566999999974211111
Q gi|254780592|r 78 DVLRRVGRTAQALAVMRQVAILYPEDQEVLAAYGKSLANAGYLDEGLDAINRAQRPDIPDWQLISAKGSVLAQMGKHSEA 157 (271)
Q Consensus 78 ~~l~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~lg~~~~~~~~~~~A 157 (271)
T Consensus 177 ~~~~~t~~~~~~~~~le~L~~~~p~---v~~llakv~~~~~~E~~av~~i~~~L~~~p~d~~LL~~Qa~FLl~K~~yelA 253 (395)
T pfam09295 177 KYVRLTKRYDRALNLLEKLREEEPE---VVSLLARVLLLMDEEIDAVKLMHDALQENPMDYELLCLQAEFLLSKKKDELA 253 (395)
T ss_pred HHHHHCCCHHHHHHHHHHHHHCCCH---HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHH
T ss_conf 9994244389899999998751844---9999999999656089999999999861887678999999999817988999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00000000000000012457776543322355435999999
Q gi|254780592|r 158 LIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFA 198 (271)
Q Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 198 (271)
T Consensus 254 L~~A~~av~~~P~~F~~W~~La~~Yi~l~d~e~ALl~LNS~ 294 (395)
T pfam09295 254 LECAKRAVNSAPSEFKTWALLVKVYIKLEDWENALLTLNSC 294 (395)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999987317866188999999999863299999999568