HHsearch alignment for GI: 254780592 and conserved domain: pfam09613

>pfam09613 HrpB1_HrpK Bacterial type III secretion protein (HrpB1_HrpK). This family of proteins is encoded by genes found within type III secretion operons in a limited range of species including Xanthomonas, Ralstonia and Burkholderia.
Probab=94.73  E-value=0.13  Score=27.59  Aligned_cols=102  Identities=14%  Similarity=0.045  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             42111110000000000000001245777654332235543599999995389854788899999998699899999999
Q gi|254780592|r  151 MGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGADSRIRQNLALVVGLQGRMKEAYSIAS  230 (271)
Q Consensus       151 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~La~~~~~~g~~~eA~~~~~  230 (271)
T Consensus        23 ~~~~~D~e~lL~AlRvLRP~~~e~d~~dg~l~i~rg~w~dA~r~lr~v~~~~~~~~~~kAL~A~CL~a~~D~~W-r~~A~  101 (156)
T pfam09613        23 LADIADAEELLEALRILRPRLAELDLFDGWLYIGRGQWDDAARLLRELEGRASHLPLCKALMAQCLFALQDPAW-REYAD  101 (156)
T ss_pred             CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH-HHHHH
T ss_conf             48877899999999985898326658787787760658999999999862677848999999999987479679-99999


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             86291728665999999998321
Q gi|254780592|r  231 QELSPEEATRNIKYIKSILSQRD  253 (271)
Q Consensus       231 ~~L~~~~~~~~~~~l~~~l~~~~  253 (271)
T Consensus       102 evLe~~~~~~~~~LV~aL~~~~~  124 (156)
T pfam09613       102 EVLEEGGDPEALTLVKALLARAE  124 (156)
T ss_pred             HHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             99861899018999999998899