HHsearch alignment for GI: 254780592 and conserved domain: pfam09613
>pfam09613 HrpB1_HrpK Bacterial type III secretion protein (HrpB1_HrpK). This family of proteins is encoded by genes found within type III secretion operons in a limited range of species including Xanthomonas, Ralstonia and Burkholderia.
Probab=94.73 E-value=0.13 Score=27.59 Aligned_cols=102 Identities=14% Similarity=0.045 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 42111110000000000000001245777654332235543599999995389854788899999998699899999999
Q gi|254780592|r 151 MGKHSEALIEYERALELSPNESSIVSNIAMSYLLMGDLKTAEEKLRFASQMIGADSRIRQNLALVVGLQGRMKEAYSIAS 230 (271)
Q Consensus 151 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~La~~~~~~g~~~eA~~~~~ 230 (271)
T Consensus 23 ~~~~~D~e~lL~AlRvLRP~~~e~d~~dg~l~i~rg~w~dA~r~lr~v~~~~~~~~~~kAL~A~CL~a~~D~~W-r~~A~ 101 (156)
T pfam09613 23 LADIADAEELLEALRILRPRLAELDLFDGWLYIGRGQWDDAARLLRELEGRASHLPLCKALMAQCLFALQDPAW-REYAD 101 (156)
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHH-HHHHH
T ss_conf 48877899999999985898326658787787760658999999999862677848999999999987479679-99999
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 86291728665999999998321
Q gi|254780592|r 231 QELSPEEATRNIKYIKSILSQRD 253 (271)
Q Consensus 231 ~~L~~~~~~~~~~~l~~~l~~~~ 253 (271)
T Consensus 102 evLe~~~~~~~~~LV~aL~~~~~ 124 (156)
T pfam09613 102 EVLEEGGDPEALTLVKALLARAE 124 (156)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 99861899018999999998899