Query         gi|254780593|ref|YP_003065006.1| undecaprenyl pyrophosphate phosphatase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 266
No_of_seqs    122 out of 2822
Neff          6.3 
Searched_HMMs 33803
Date          Wed Jun  1 15:47:58 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780593.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >2j16_A SDP-1, tyrosine-protei  76.4     2.3 6.7E-05   21.1   2.9   27  160-186   125-153 (182)
  2 >3f81_A Dual specificity prote  72.7     3.3 9.8E-05   20.1   3.0   27  160-186   123-151 (183)
  3 >1yz4_A DUSP15, dual specifici  72.6     3.4 9.9E-05   20.0   3.0   27  160-186    92-120 (160)
  4 >2nt2_A Protein phosphatase sl  72.3     3.4  0.0001   20.0   3.0   27  160-186    89-117 (145)
  5 >3emu_A Leucine rich repeat an  72.0     3.5  0.0001   19.9   3.0   27  160-186    95-123 (161)
  6 >1wrm_A Dual specificity phosp  71.3     3.7 0.00011   19.7   3.0   27  160-186    91-119 (165)
  7 >2pq5_A Dual specificity prote  70.3       4 0.00012   19.5   3.0   27  160-186   139-167 (205)
  8 >1zzw_A Dual specificity prote  67.6     4.8 0.00014   19.0   2.9   27  160-186    91-119 (149)
  9 >2e0t_A Dual specificity phosp  66.9     5.8 0.00017   18.5   3.2   27  160-186    93-121 (128)
 10 >1xri_A AT1G05000; structural   66.3     5.3 0.00016   18.8   2.9   28  160-187   100-128 (151)
 11 >2hcm_A Dual specificity prote  65.6     6.4 0.00019   18.2   3.2   27  160-186    97-125 (164)
 12 >2esb_A Dual specificity prote  65.5     5.8 0.00017   18.5   3.0   27  160-186   105-133 (188)
 13 >2wgp_A Dual specificity prote  64.7     6.1 0.00018   18.3   3.0   27  160-186   111-139 (147)
 14 >2g6z_A Dual specificity prote  62.7     7.1 0.00021   17.9   3.0   28  160-187    91-120 (211)
 15 >3ezz_A Dual specificity prote  60.9     7.9 0.00023   17.6   3.0   27  160-186    89-117 (144)
 16 >2r0b_A Serine/threonine/tyros  60.1     8.3 0.00024   17.5   3.0   27  160-186    98-126 (154)
 17 >3cm3_A Late protein H1, dual   57.3     6.4 0.00019   18.2   2.1   19  160-178   116-134 (176)
 18 >2i6j_A Ssoptp, sulfolobus sol  57.3      11 0.00033   16.6   3.3   27  160-186    97-125 (161)
 19 >2img_A Dual specificity prote  57.0      10  0.0003   16.9   3.0   27  160-186    97-125 (151)
 20 >2oud_A Dual specificity prote  55.3      11 0.00032   16.8   2.9   27  160-186    95-123 (177)
 21 >1rxd_A Protein tyrosine phosp  53.4      12 0.00034   16.6   2.8   27  160-186   104-131 (159)
 22 >2hxp_A Dual specificity prote  51.4      14 0.00042   16.0   3.0   27  160-186    93-121 (155)
 23 >1vdd_A Recombination protein   47.3      16 0.00048   15.6   4.1   39  151-189     8-46  (66)
 24 >2c46_A MRNA capping enzyme; g  46.4      17  0.0005   15.5   3.3   27  160-186   149-177 (241)
 25 >1yn9_A BVP, polynucleotide 5'  44.2      18 0.00054   15.3   3.3   27  160-186   121-149 (169)
 26 >3f41_A Phytase; tandem repeat  38.8      22 0.00065   14.8   3.2   26  160-185   113-142 (204)
 27 >2q05_A Late protein H1, dual   38.8      20 0.00059   15.0   2.2   20  160-179   133-152 (195)
 28 >1zcl_A Protein tyrosine phosp  36.0      24 0.00072   14.5   3.1   28  159-186   124-152 (180)
 29 >3f41_A Phytase; tandem repeat  32.1      28 0.00083   14.1   3.3   27  160-186   121-150 (212)
 30 >1ohe_A CDC14B, CDC14B2 phosph  30.8      29 0.00087   13.9   3.3   25  161-185   119-145 (189)
 31 >1fpz_A Cyclin-dependent kinas  28.8      32 0.00094   13.7   2.9   27  160-186   141-170 (212)
 32 >2f46_A Hypothetical protein;   24.5      38  0.0011   13.2   3.5   27  160-186   110-136 (156)
 33 >1e3o_C Octamer-binding transc  23.2      40  0.0012   13.1   3.7   43  142-187    22-64  (91)
 34 >1d5r_A Phosphoinositide phosp  21.0      35   0.001   13.5   0.9   21  160-180   119-139 (182)

No 1  
>>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B (A:)
Probab=76.40  E-value=2.3  Score=21.13  Aligned_cols=27  Identities=22%  Similarity=0.249  Sum_probs=23.1

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-++  .|++-++|.++
T Consensus       125 ~~G~~Rs~~v~~ayLm~~~~~~~~~A~~~  153 (182)
T 2j16_A          125 QCGLSRSATLIIAYIMKYHNLSLRHSYDL  153 (182)
T ss_dssp             SSCCSHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             HHHHCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             14444279999999998629999999999


No 2  
>>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} PDB: 1vhr_A* 1j4x_A* (A:)
Probab=72.75  E-value=3.3  Score=20.07  Aligned_cols=27  Identities=30%  Similarity=0.223  Sum_probs=21.3

Q ss_pred             CCHHHHHHHHHHHHH--HHCCCHHHHHHH
Q ss_conf             103568889999999--726888999999
Q gi|254780593|r  160 IPGTSRSGATITGAL--ILGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l--~lG~~r~~A~~f  186 (266)
                      -=|.||||+++.+-+  ..|++.++|.++
T Consensus       123 ~~G~~RS~~vv~aylm~~~~~~~~~A~~~  151 (183)
T 3f81_A          123 REGYSRSPTLVIAYLMMRQKMDVKSALSI  151 (183)
T ss_dssp             SSSSSHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             77777409999999998309899999999


No 3  
>>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} (A:)
Probab=72.58  E-value=3.4  Score=20.03  Aligned_cols=27  Identities=30%  Similarity=0.367  Sum_probs=22.2

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-+.  .|++-++|.++
T Consensus        92 ~~G~~RSgtv~~ayLm~~~~~~~~~A~~~  120 (160)
T 1yz4_A           92 FAGISRSTTIVTAYVMTVTGLGWRDVLEA  120 (160)
T ss_dssp             TTSSSHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             HHCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             31246249999999999849689999999


No 4  
>>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} (A:)
Probab=72.28  E-value=3.4  Score=19.96  Aligned_cols=27  Identities=26%  Similarity=0.347  Sum_probs=22.3

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-+.  .|++.++|.++
T Consensus        89 ~~G~~Rs~~vv~ayLm~~~~~~~~~A~~~  117 (145)
T 2nt2_A           89 KMGVSRSASTVIAYAMKEYGWNLDRAYDY  117 (145)
T ss_dssp             SSSSSHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             10236079999999999819999999999


No 5  
>>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} (A:)
Probab=71.97  E-value=3.5  Score=19.91  Aligned_cols=27  Identities=15%  Similarity=0.050  Sum_probs=22.3

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      --|.||||+.+.+-++  .|++.++|.++
T Consensus        95 ~~G~~RS~~v~~ayLm~~~~~~~~~A~~~  123 (161)
T 3emu_A           95 GTGVNKAPAIVIAFLMYYQRLSFINAFNK  123 (161)
T ss_dssp             SSSSSHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             12242149999999998429999999999


No 6  
>>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} (A:)
Probab=71.33  E-value=3.7  Score=19.73  Aligned_cols=27  Identities=19%  Similarity=0.179  Sum_probs=21.6

Q ss_pred             CCHHHHHHHHHHHHHHH--CCCHHHHHHH
Q ss_conf             10356888999999972--6888999999
Q gi|254780593|r  160 IPGTSRSGATITGALIL--GADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~l--G~~r~~A~~f  186 (266)
                      --|+||||+.+.+-++.  |++-++|.++
T Consensus        91 ~~G~~RS~~v~~ayL~~~~~~~~~~A~~~  119 (165)
T 1wrm_A           91 LAGVSRSVTLVIAYIMTVTDFGWEDALHT  119 (165)
T ss_dssp             SSSSSHHHHHHHHHHHHTSSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             34466259999999999808789999999


No 7  
>>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A (A:)
Probab=70.33  E-value=4  Score=19.51  Aligned_cols=27  Identities=22%  Similarity=0.161  Sum_probs=22.5

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-+.  .|++.++|.++
T Consensus       139 ~~G~~RS~~i~~ayLm~~~~~~~~~A~~~  167 (205)
T 2pq5_A          139 AMGVSRSATLVLAFLMIYENMTLVEAIQT  167 (205)
T ss_dssp             SSSSSHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             56664249999999999749899999999


No 8  
>>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} (A:)
Probab=67.60  E-value=4.8  Score=19.03  Aligned_cols=27  Identities=26%  Similarity=0.325  Sum_probs=21.9

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      --|.||||+.+.+-+.  .|++-++|.++
T Consensus        91 ~~G~~RS~~vv~ayLm~~~~~~~~~A~~~  119 (149)
T 1zzw_A           91 QAGVSRSATIVIAYLMKHTRMTMTDAYKF  119 (149)
T ss_dssp             SSSSSHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             55556359999999999849799999999


No 9  
>>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA; 1.67A {Homo sapiens} (A:1-128)
Probab=66.86  E-value=5.8  Score=18.49  Aligned_cols=27  Identities=22%  Similarity=0.133  Sum_probs=20.9

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-++  .|++-++|.++
T Consensus        93 ~~G~~RS~~i~~ayLm~~~~~s~~~A~~~  121 (128)
T 2e0t_A           93 AVGVSRSATLVLAYLMLYHHLTLVEAIKK  121 (128)
T ss_dssp             SSSSHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             45686089999999998609999999999


No 10 
>>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics, phosphoprotein phosphatase; 3.30A {Arabidopsis thaliana} (A:)
Probab=66.32  E-value=5.3  Score=18.77  Aligned_cols=28  Identities=14%  Similarity=-0.008  Sum_probs=23.5

Q ss_pred             CCHHHHHHHHHHHHH-HHCCCHHHHHHHH
Q ss_conf             103568889999999-7268889999999
Q gi|254780593|r  160 IPGTSRSGATITGAL-ILGADKRSAAEFS  187 (266)
Q Consensus       160 iPGiSRSG~TI~~~l-~lG~~r~~A~~fS  187 (266)
                      -.|.||||..+...+ ..|++.++|.++=
T Consensus       100 ~~G~~RS~~via~~m~~~g~s~~~A~~~v  128 (151)
T 1xri_A          100 KRGKHRTGCLVGCLRKLQKWCLTSIFDEY  128 (151)
T ss_dssp             SSSSSHHHHHHHHHHHHTTBCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             89950789999999999499999999999


No 11 
>>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} (A:)
Probab=65.58  E-value=6.4  Score=18.24  Aligned_cols=27  Identities=33%  Similarity=0.329  Sum_probs=22.0

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-++  .|++-++|.++
T Consensus        97 ~~G~~RS~~v~~~yLm~~~~~~~~eAl~~  125 (164)
T 2hcm_A           97 KNGRSRSAAVCTAYLMRHRGHSLDRAFQM  125 (164)
T ss_dssp             SSSSHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             57786079999999999869699999999


No 12 
>>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} (A:)
Probab=65.55  E-value=5.8  Score=18.50  Aligned_cols=27  Identities=26%  Similarity=0.235  Sum_probs=21.5

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      --|.||||+.+.+-+.  .|++.++|.++
T Consensus       105 ~~G~~RS~~iv~ayLm~~~~~~~~~A~~~  133 (188)
T 2esb_A          105 AAGVSRSAALCLAYLMKYHAMSLLDAHTW  133 (188)
T ss_dssp             SSSSSHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             35444389999999999719999999999


No 13 
>>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specificity phosphatase; 1.88A {Homo sapiens} (A:1-147)
Probab=64.71  E-value=6.1  Score=18.33  Aligned_cols=27  Identities=22%  Similarity=0.158  Sum_probs=21.8

Q ss_pred             CCHHHHHHHHHHHHH--HHCCCHHHHHHH
Q ss_conf             103568889999999--726888999999
Q gi|254780593|r  160 IPGTSRSGATITGAL--ILGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l--~lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-+  ..|++.++|.++
T Consensus       111 ~~G~~RS~~vv~ayLm~~~~~~~~~A~~~  139 (147)
T 2wgp_A          111 AAGVSRSATLCIAYLMKFHNVCLLEAYNW  139 (147)
T ss_dssp             SSSSSHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             76565089999999999839999999999


No 14 
>>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} (A:)
Probab=62.68  E-value=7.1  Score=17.95  Aligned_cols=28  Identities=21%  Similarity=0.185  Sum_probs=21.8

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHHH
Q ss_conf             1035688899999997--268889999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEFS  187 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~fS  187 (266)
                      -=|.||||+.+.+-+.  .|++-++|.++=
T Consensus        91 ~~G~~RS~~~v~aYLm~~~~~~~~~A~~~v  120 (211)
T 2g6z_A           91 EAGISRSPTICMAYLMKTKQFRLKEAFDYI  120 (211)
T ss_dssp             SSSSSHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             887873099999999986299999999999


No 15 
>>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A (A:)
Probab=60.86  E-value=7.9  Score=17.63  Aligned_cols=27  Identities=30%  Similarity=0.220  Sum_probs=21.3

Q ss_pred             CCHHHHHHHHHHHHH--HHCCCHHHHHHH
Q ss_conf             103568889999999--726888999999
Q gi|254780593|r  160 IPGTSRSGATITGAL--ILGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l--~lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-+  ..|++.++|.++
T Consensus        89 ~~G~~RS~~~~~~yL~~~~~~~~~~A~~~  117 (144)
T 3ezz_A           89 QAGISRSATICLAYLMMKKRVRLEEAFEF  117 (144)
T ss_dssp             SSSSSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             01255179999999999839999999999


No 16 
>>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} (A:)
Probab=60.15  E-value=8.3  Score=17.50  Aligned_cols=27  Identities=30%  Similarity=0.447  Sum_probs=21.3

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      --|.||||+.+++-+.  .|++-++|.++
T Consensus        98 ~~G~~RS~~v~~ayLm~~~~~~~~~A~~~  126 (154)
T 2r0b_A           98 NAGISRSAAFVIAYIMETFGMKYRDAFAY  126 (154)
T ss_dssp             SSSSSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             20013489999999998639899999999


No 17 
>>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A (A:)
Probab=57.30  E-value=6.4  Score=18.20  Aligned_cols=19  Identities=37%  Similarity=0.462  Sum_probs=15.6

Q ss_pred             CCHHHHHHHHHHHHHHHCC
Q ss_conf             1035688899999997268
Q gi|254780593|r  160 IPGTSRSGATITGALILGA  178 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~lG~  178 (266)
                      --|+||||+.+.+-++.-.
T Consensus       116 ~~G~~RS~~v~~ayLm~~~  134 (176)
T 3cm3_A          116 AAGVNRSGAMILAYLMSKN  134 (176)
T ss_dssp             SSSSSHHHHHHHHHHHHHC
T ss_pred             CCCCCCCHHHHHHHHHHHC
T ss_conf             9998510999999999983


No 18 
>>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 2i6o_A* 2dxp_A* 2i6p_A* (A:)
Probab=57.28  E-value=11  Score=16.62  Aligned_cols=27  Identities=30%  Similarity=0.457  Sum_probs=20.3

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      --|+||||+.+++-+.  .|++-.+|.++
T Consensus        97 ~~G~gRSg~~~~~yl~~~~~~~~~~a~~~  125 (161)
T 2i6j_A           97 VGGIGRTGTILASYLILTEGLEVESAIDE  125 (161)
T ss_dssp             SSSSHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             ECCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             24767069999999999827999999999


No 19 
>>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} (A:)
Probab=56.99  E-value=10  Score=16.93  Aligned_cols=27  Identities=22%  Similarity=0.262  Sum_probs=21.2

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -=|++|||+.+.+-+.  .+++-++|.+.
T Consensus        97 ~~G~~Rsg~~~~~~Lm~~~~~~~~~a~~~  125 (151)
T 2img_A           97 ALGFGRTGTXLACYLVKERGLAAGDAIAE  125 (151)
T ss_dssp             SSSSSHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             78876479999999998619899999999


No 20 
>>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} (A:)
Probab=55.27  E-value=11  Score=16.75  Aligned_cols=27  Identities=26%  Similarity=0.325  Sum_probs=21.3

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -=|.||||+.+.+-++  .|++-++|.++
T Consensus        95 ~~G~~RS~~~v~ayLm~~~~~~~~~A~~~  123 (177)
T 2oud_A           95 QAGVSRSATIVIAYLMKHTRMTMTDAYKF  123 (177)
T ss_dssp             SSSSSHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             75556069999999999829899999999


No 21 
>>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} (A:)
Probab=53.43  E-value=12  Score=16.57  Aligned_cols=27  Identities=26%  Similarity=0.345  Sum_probs=21.4

Q ss_pred             CCHHHHHHHHHHHHH-HHCCCHHHHHHH
Q ss_conf             103568889999999-726888999999
Q gi|254780593|r  160 IPGTSRSGATITGAL-ILGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l-~lG~~r~~A~~f  186 (266)
                      -=|.+|||+.+++-+ ..|.+.++|.++
T Consensus       104 ~~G~~RSg~~~~aylm~~~~~~~~A~~~  131 (159)
T 1rxd_A          104 VAGLGRAPVLVALALIEGGXKYEDAVQF  131 (159)
T ss_dssp             SSSSTTHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             6998746999999999919799999999


No 22 
>>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 1mkp_A (A:)
Probab=51.43  E-value=14  Score=16.02  Aligned_cols=27  Identities=26%  Similarity=0.263  Sum_probs=21.5

Q ss_pred             CCHHHHHHHHHHHHH--HHCCCHHHHHHH
Q ss_conf             103568889999999--726888999999
Q gi|254780593|r  160 IPGTSRSGATITGAL--ILGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l--~lG~~r~~A~~f  186 (266)
                      -=|.||||+.+++-+  -.|++.++|.++
T Consensus        93 ~~G~~RS~~~v~ayL~~~~~~~~~~A~~~  121 (155)
T 2hxp_A           93 LAGVSRSVTVTVAYLMQKLHLSLNDAYDL  121 (155)
T ss_dssp             SSSSSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             67788179999999999839979999999


No 23 
>>1vdd_A Recombination protein RECR; helix-hairpin-helix, zinc finger, toprim, walker B ATP binding motif; 2.50A {Deinococcus radiodurans} (A:1-66)
Probab=47.27  E-value=16  Score=15.61  Aligned_cols=39  Identities=10%  Similarity=0.215  Sum_probs=33.1

Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             889987442103568889999999726888999999999
Q gi|254780593|r  151 IGLFQCIAMIPGTSRSGATITGALILGADKRSAAEFSFF  189 (266)
Q Consensus       151 IGl~Q~lAliPGiSRSG~TI~~~l~lG~~r~~A~~fSFl  189 (266)
                      --+.|.++-+||+.+-.+.=.+--++..+++++.+++=-
T Consensus         8 ~~LI~~l~~LPGIG~KsA~Rla~~lL~~~~~~~~~l~~~   46 (66)
T 1vdd_A            8 VSLIRELSRLPGIGPKSAQRLAFHLFEQPREDIERLASA   46 (66)
T ss_dssp             HHHHHHHHTSTTCCHHHHHHHHHHHSSSCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             999999967899889999999999972999999999999


No 24 
>>2c46_A MRNA capping enzyme; guanylyltransferase, phosphatase, transferase, alternative splicing, hydrolase, mRNA processing, multifunctional enzyme; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A (A:)
Probab=46.43  E-value=17  Score=15.52  Aligned_cols=27  Identities=22%  Similarity=0.193  Sum_probs=19.7

Q ss_pred             CCHHHHHHHHHHHHHHH--CCCHHHHHHH
Q ss_conf             10356888999999972--6888999999
Q gi|254780593|r  160 IPGTSRSGATITGALIL--GADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~l--G~~r~~A~~f  186 (266)
                      -=|+||||..+++-++.  +++-.+|.+.
T Consensus       149 ~~G~gRSgt~i~aylm~~~~~~~~~ai~~  177 (241)
T 2c46_A          149 THGFNRTGFLICAFLVEKMDWSIEAAVAT  177 (241)
T ss_dssp             SSSSHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             99988509999999999629999999999


No 25 
>>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} (A:)
Probab=44.20  E-value=18  Score=15.31  Aligned_cols=27  Identities=26%  Similarity=0.406  Sum_probs=20.2

Q ss_pred             CCHHHHHHHHHHHHHH--HCCCHHHHHHH
Q ss_conf             1035688899999997--26888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI--LGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~--lG~~r~~A~~f  186 (266)
                      -.|+||||+.+++-+.  .+.+-.+|.+.
T Consensus       121 ~~G~gRSgt~i~a~l~~~~~~~~~~av~~  149 (169)
T 1yn9_A          121 THGINRTGYMVCRYLMHTLGIAPQEAIDR  149 (169)
T ss_dssp             SSSSHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             04778569999999999739999999999


No 26 
>>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} (A:57-120,A:192-331)
Probab=38.84  E-value=22  Score=14.78  Aligned_cols=26  Identities=15%  Similarity=0.105  Sum_probs=17.4

Q ss_pred             CCHHHHHHHHHHHHHHH----CCCHHHHHH
Q ss_conf             10356888999999972----688899999
Q gi|254780593|r  160 IPGTSRSGATITGALIL----GADKRSAAE  185 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~l----G~~r~~A~~  185 (266)
                      --|++|||+.+++-+..    +.+-.++.+
T Consensus       113 ~aG~GRTg~~ia~yli~~~~~~~~a~~~l~  142 (204)
T 3f41_A          113 YAGMGRTTIFMVMHDILKNAKDVSFDDIIQ  142 (204)
T ss_dssp             SSSSHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf             899960648899999860654367799999


No 27 
>>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, PSI-2, protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} (A:)
Probab=38.75  E-value=20  Score=15.03  Aligned_cols=20  Identities=35%  Similarity=0.416  Sum_probs=15.3

Q ss_pred             CCHHHHHHHHHHHHHHHCCC
Q ss_conf             10356888999999972688
Q gi|254780593|r  160 IPGTSRSGATITGALILGAD  179 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~lG~~  179 (266)
                      --|.||||+.+.+-++.-.+
T Consensus       133 ~~G~~RS~~v~~ayLm~~~~  152 (195)
T 2q05_A          133 AAGVNRSGAXILAYLXSKNK  152 (195)
T ss_dssp             SSSSSHHHHHHHHHHHHHCC
T ss_pred             CCCCCCCHHHHHHHHHHHCC
T ss_conf             87775248999999999739


No 28 
>>1zcl_A Protein tyrosine phosphatase 4A1; PRL-1 PTP4A dual specific phosphatase, hydrolase; 2.90A {Rattus norvegicus} PDB: 1x24_A (A:)
Probab=36.02  E-value=24  Score=14.50  Aligned_cols=28  Identities=21%  Similarity=0.293  Sum_probs=20.8

Q ss_pred             HCCHHHHHHHHHHHH-HHHCCCHHHHHHH
Q ss_conf             210356888999999-9726888999999
Q gi|254780593|r  159 MIPGTSRSGATITGA-LILGADKRSAAEF  186 (266)
Q Consensus       159 liPGiSRSG~TI~~~-l~lG~~r~~A~~f  186 (266)
                      .-=|+||||+-+.+- +..|++-.+|.+.
T Consensus       124 C~~G~~RSgt~~~~~l~~~~~~~~~ai~~  152 (180)
T 1zcl_A          124 SVAGLGRAPVLVALALIEGGMKYEDAVQF  152 (180)
T ss_dssp             ESSSSSHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             28998638999999999939799999999


No 29 
>>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} (A:349-420,A:490-629)
Probab=32.05  E-value=28  Score=14.09  Aligned_cols=27  Identities=11%  Similarity=-0.016  Sum_probs=20.3

Q ss_pred             CCHHHHHHHHHHHHHH-H--CCCHHHHHHH
Q ss_conf             1035688899999997-2--6888999999
Q gi|254780593|r  160 IPGTSRSGATITGALI-L--GADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~-l--G~~r~~A~~f  186 (266)
                      --|++|||+.+++-++ .  +.+-++|.+.
T Consensus       121 ~aG~GRTgtvia~yli~~~~~~s~~eai~~  150 (212)
T 3f41_A          121 QAGAGRTTAYMAMYDMMKNPDVSLGDILSR  150 (212)
T ss_dssp             SSSSHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             999878989999999874777127899999


No 30 
>>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} (A:160-348)
Probab=30.77  E-value=29  Score=13.95  Aligned_cols=25  Identities=16%  Similarity=0.255  Sum_probs=18.3

Q ss_pred             CHHHHHHHHHHHHHHH--CCCHHHHHH
Q ss_conf             0356888999999972--688899999
Q gi|254780593|r  161 PGTSRSGATITGALIL--GADKRSAAE  185 (266)
Q Consensus       161 PGiSRSG~TI~~~l~l--G~~r~~A~~  185 (266)
                      =|.||||+.+++-+..  +++-.+|++
T Consensus       119 ~G~gRsgt~~~~~l~~~~~v~v~~~v~  145 (189)
T 1ohe_A          119 AGLGRTGTLIACYIMKHYRMTAAETIA  145 (189)
T ss_dssp             SSSHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             999758999999999971989999999


No 31 
>>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} (A:)
Probab=28.78  E-value=32  Score=13.73  Aligned_cols=27  Identities=19%  Similarity=0.133  Sum_probs=19.0

Q ss_pred             CCHHHHHHHHHHHHHHH---CCCHHHHHHH
Q ss_conf             10356888999999972---6888999999
Q gi|254780593|r  160 IPGTSRSGATITGALIL---GADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~l---G~~r~~A~~f  186 (266)
                      --|+||||..+++-.+.   ..|-.+|.+.
T Consensus       141 ~~G~gRsgtf~~~~~l~~~~~~~v~~~v~~  170 (212)
T 1fpz_A          141 YGGLGRSCLVAACLLLYLSDTISPEQAIDS  170 (212)
T ss_dssp             SSSSSHHHHHHHHHHHHHCSSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf             999966899999999994789999999999


No 32 
>>2f46_A Hypothetical protein; 7380613, DUF442, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.41A {Neisseria meningitidis Z2491} (A:)
Probab=24.54  E-value=38  Score=13.24  Aligned_cols=27  Identities=15%  Similarity=-0.193  Sum_probs=23.9

Q ss_pred             CCHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             103568889999999726888999999
Q gi|254780593|r  160 IPGTSRSGATITGALILGADKRSAAEF  186 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~lG~~r~~A~~f  186 (266)
                      -=|.+||..+....+..|.+.++|.++
T Consensus       110 ~~G~r~s~lv~~yl~~~g~s~~~A~~~  136 (156)
T 2f46_A          110 RTGTRCSLLWGFRRAAEGXPVDEIIRR  136 (156)
T ss_dssp             SSSHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             899839999999999839999999999


No 33 
>>1e3o_C Octamer-binding transcription factor 1; transcription factor, POU domain, dimer, DNA binding; 1.9A {Homo sapiens} (C:1-91)
Probab=23.24  E-value=40  Score=13.09  Aligned_cols=43  Identities=12%  Similarity=0.088  Sum_probs=36.6

Q ss_pred             CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf             2024454778899874421035688899999997268889999999
Q gi|254780593|r  142 NYPIPLAIKIGLFQCIAMIPGTSRSGATITGALILGADKRSAAEFS  187 (266)
Q Consensus       142 ~~~~~~a~~IGl~Q~lAliPGiSRSG~TI~~~l~lG~~r~~A~~fS  187 (266)
                      .+.+.++   -+.|+++.+-|-+.|.+||+---.+.++-+.+-+.-
T Consensus        22 ~LG~TQ~---dVG~al~~l~g~~fSQTtIcRFE~L~LS~knm~kLk   64 (91)
T 1e3o_C           22 KLGFTQG---DVGLAMGKLYGNDFSQTTISRFEALNLSFKNMSKLK   64 (91)
T ss_dssp             HTTCCHH---HHHHHHHHHHSCCCCHHHHHHHHHTCSCHHHHHHHH
T ss_pred             CCCCCHH---HHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
T ss_conf             5477598---999999953467521336417887344612178889


No 34 
>>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} (A:1-182)
Probab=21.03  E-value=35  Score=13.46  Aligned_cols=21  Identities=24%  Similarity=0.335  Sum_probs=16.5

Q ss_pred             CCHHHHHHHHHHHHHHHCCCH
Q ss_conf             103568889999999726888
Q gi|254780593|r  160 IPGTSRSGATITGALILGADK  180 (266)
Q Consensus       160 iPGiSRSG~TI~~~l~lG~~r  180 (266)
                      -.|+||||..+.+-+..-.+.
T Consensus       119 ~~G~gRsg~~~a~~l~~~~~~  139 (182)
T 1d5r_A          119 KAGKGRTGVMICAYLLHRGKF  139 (182)
T ss_dssp             SSSSHHHHHHHHHHHHHHTSC
T ss_pred             CCCCHHHHHHHHHHHHHHCCC
T ss_conf             899605699999999983169


Done!