RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780593|ref|YP_003065006.1| undecaprenyl pyrophosphate
phosphatase [Candidatus Liberibacter asiaticus str. psy62]
         (266 letters)



>d2o3aa1 c.116.1.8 (A:1-167) Uncharacterized protein AF0751
          {Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 167

 Score = 24.6 bits (54), Expect = 8.6
 Identities = 5/14 (35%), Positives = 8/14 (57%)

Query: 27 TAHLLLVSRLLGAD 40
          + H+ L +R  GA 
Sbjct: 19 STHVALTARAFGAK 32


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.335    0.151    0.445 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,009,526
Number of extensions: 46439
Number of successful extensions: 162
Number of sequences better than 10.0: 1
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 18
Length of query: 266
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 182
Effective length of database: 1,254,276
Effective search space: 228278232
Effective search space used: 228278232
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 52 (24.3 bits)