HHsearch alignment for GI: 254780594 and conserved domain: TIGR02200
>TIGR02200 GlrX_actino Glutaredoxin-like protein; InterPro: IPR011915 Glutaredoxins , , , also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system . Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond . It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif..
Probab=97.31 E-value=0.0001 Score=46.41 Aligned_cols=62 Identities=10% Similarity=0.059 Sum_probs=53.0
Q ss_pred CCCCCCCCCHHHHHHHHHH-HHCCCCEEEEECCCCCCCHHHH-HHC-CCCCCCHHHHCCHHHHCC
Q ss_conf 5213589986899999999-9869982999888677788999-855-687752011100011101
Q gi|254780594|r 2 SILYHYPLSSSSRFIRLIL-SEYEFTTDMIEEFPWGKRREFL-ELN-PSGTLPVYIDEHMQALCG 63 (230)
Q Consensus 2 ~~LY~~~~sp~~~kvr~~L-~e~gi~y~~~~~~~~~~~~~~~-~ln-P~g~vP~L~~~dg~~l~e 63 (230)
T Consensus 2 ~~vY~~~WCgyC~~l~~~Lk~~~G~~Ye~~di~~d~~AA~~v~svn~Gn~~vPtV~~~DGs~~tn 66 (78)
T TIGR02200 2 VTVYATTWCGYCAQLMRTLKDKDGAAYEVVDIEEDEEAADYVKSVNDGNKTVPTVKFADGSFLTN 66 (78)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCC
T ss_conf 04640699806789987534307995114524548475528665308871301687479944438