HHsearch alignment for GI: 254780594 and conserved domain: cd03038
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.71 E-value=3.6e-18 Score=123.61 Aligned_cols=75 Identities=24% Similarity=0.237 Sum_probs=63.2
Q ss_pred CCCCCCC-------CCHHHHHHHHHHHHCCCCEEEEECCCCCCCH--HHHHHCCCCCCCHHHHCCHHHHCCCCHHHHHHH
Q ss_conf 5213589-------9868999999999869982999888677788--999855687752011100011101210356777
Q gi|254780594|r 2 SILYHYP-------LSSSSRFIRLILSEYEFTTDMIEEFPWGKRR--EFLELNPSGTLPVYIDEHMQALCGVFVISEYLD 72 (230)
Q Consensus 2 ~~LY~~~-------~sp~~~kvr~~L~e~gi~y~~~~~~~~~~~~--~~~~lnP~g~vP~L~~~dg~~l~eS~aI~~yL~ 72 (230)
T Consensus 1 i~lyDl~~~~~~~~~SP~~wkvRlaL~~Kgi~y~~~~v~~~~~~~~~~~~~~~~~~~VPvl~d~~g~~i~dS~~Ia~YLe 80 (84)
T cd03038 1 ITLYDLAGKDPVRAFSPNVWKTRLALNHKGLEYKTVPVEFPDIPPILGELTSGGFYTVPVIVDGSGEVIGDSFAIAEYLE 80 (84)
T ss_pred CEEEECCCCCCCCEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCCCCCCEEEEEEECCCCEEECHHHHHHHHH
T ss_conf 98885689999970386269999999827997479887167864210002589854266899299999877999999998
Q ss_pred HHCC
Q ss_conf 5288
Q gi|254780594|r 73 ETYG 76 (230)
Q Consensus 73 ~~~~ 76 (230)
T Consensus 81 e~yP 84 (84)
T cd03038 81 EAYP 84 (84)
T ss_pred HHCC
T ss_conf 5683