HHsearch alignment for GI: 254780594 and conserved domain: cd03181
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.77 E-value=5.3e-18 Score=122.67 Aligned_cols=115 Identities=13% Similarity=0.228 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 99999999999861234257789999887766421221023343999999999999998556545347984266750289
Q gi|254780594|r 91 QRAETRRMIEWFMYQMEQDVTRPLAHERVYKLHMTTEQGGGSPDSKVLRIARNNMREHIKYITWLIKSRSWIAGHHMSYA 170 (230)
Q Consensus 91 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~l~~~~fl~Gd~~s~A 170 (230)
T Consensus 1 EraqV~qWl~~~~~~l~p~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~TlA 70 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLP-LL---------GIAPYNKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLA 70 (123)
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHH-HC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 99899999999967881999999999-82---------788788699999999999999999999823985167876599
Q ss_pred HHHHHHHHHHHHHC--CCCCHHHCHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 99999999999961--8999456768899999997099889841333
Q gi|254780594|r 171 DFAASATISILDYL--GEIDWDTAPIVKEWYQRMKSRPSFRPLLSER 215 (230)
Q Consensus 171 Di~~~~~l~~~~~~--~~~~~~~~p~l~~w~~r~~~rps~~~~l~e~ 215 (230)
T Consensus 71 Di~~~~~l~~~~~~~~~~~~~~~~Pnl~rw~~~i~~rP~~k~~~~~~ 117 (123)
T cd03181 71 DIFVAGALLLGFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAVFGEV 117 (123)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHCCC
T ss_conf 99999999999996278876612779999999998399999996798