HHsearch alignment for GI: 254780595 and conserved domain: CHL00194

Probab=99.97  E-value=2.7e-30  Score=192.36  Aligned_cols=213  Identities=16%  Similarity=0.179  Sum_probs=161.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCEEEEEECCCCC-C
Q ss_conf             93999888-888999999999889889999679446345564498289806786402346541156327876124443-3
Q gi|254780595|r    1 MHLMIFGA-GYTGKFIADAALKVGVYTCGTTRSVSNLLTLKHKGISPFLFADQKINNLLREKLYFTTHIVQCIKPSSE-G   78 (289)
Q Consensus         1 MkIlI~Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~   78 (289)
T Consensus         1 M~ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v~gDl-~dpesl~~Al~GvdaVi~~~~~~~~~~   79 (319)
T CHL00194          1 MSLLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELVYGDL-SLPETIPPALEGITAIIDASTSRPSDL   79 (319)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECC-CCHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf             9799989985899999999996889089995786763234215967999427-887789999659967999456677886


Q ss_pred             CEE---ECCCCCHHH--HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             100---012210134--432012334333320102576212345321123431134554455554320012345676420
Q gi|254780595|r   79 DPC---IISMSKDFY--KFMPHVKWIGYLSSTSIYGNREGQWVDEHSFVHPISCVATQRFNAEKEWLAITKKLNIKLAVL  153 (289)
Q Consensus        79 ~~~---~~~~~~~~~--~~~~~~~~~i~~SS~~VYg~~~g~~i~E~~~~~P~~~y~~~k~~~E~~~~~~~~~~~~~~~il  153 (289)
T Consensus        80 ~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga---------~----~~~~~p~~~~K~~~E~~L----~~Sgl~~TIl  142 (319)
T CHL00194         80 NNAYQIDLEGKLALIEAAKAAKVKRFIFFSILNA---------E----QYPQVPLMKIKSDIEEKL----KQSGINYTIF  142 (319)
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC---------C----CCCCCHHHHHHHHHHHHH----HHCCCCEEEE
T ss_conf             2088988988999999999849988999613566---------6----688756778799999999----8679985998


Q ss_pred             CCCCCCCCCCCHHHH----HHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCC--CCCCEECCCCCHHHHHHHHHHHHH
Q ss_conf             347777898503444----31134543222110001024777799999995135--578616268433338999999999
Q gi|254780595|r  154 RLSGIYGPKRNPFIK----IRQKNSLRLVKKNQVFNRIRVEDVARCVIFLMTHH--LGGIFNLSDDEPAPPQNVIMEAAS  227 (289)
Q Consensus       154 R~~~iyGp~r~~~~~----~~~g~~~~~~~~~~~~~~ihv~Dva~~i~~l~~~~--~~~iyni~~~~~~s~~e~~~~i~~  227 (289)
T Consensus       143 RPs~F~q---~l~~~~a~pi~~~~~v~~~~~~~~ia~I~~~DVA~~~a~aL~~~~~~gk~y~L~GP~a~T~~EIa~l~~~  219 (319)
T CHL00194        143 RLAGFFQ---GLISQYAIPILDSQTIWITGESTPIAYIDTQDAAKFALKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQ  219 (319)
T ss_pred             CCHHHHH---HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             4739999---8899876776307857766998752887799999999999589775898999549863899999999999


Q ss_pred             HHCCCCC
Q ss_conf             9557998
Q gi|254780595|r  228 LMKITPP  234 (289)
Q Consensus       228 ~~g~~~~  234 (289)
T Consensus       220 ~~Gk~~~  226 (319)
T CHL00194        220 LSGQKAK  226 (319)
T ss_pred             HHCCCCC
T ss_conf             8599987