HHsearch alignment for GI: 254780595 and conserved domain: PRK08643

Probab=98.30  E-value=1.4e-05  Score=51.34  Aligned_cols=200  Identities=13%  Similarity=0.030  Sum_probs=104.2

Q ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHHCCCEE--EECCCCCCCHH------HHHHHCCCCEEE
Q ss_conf             999888-888999999999889889999679446345----56449828--98067864023------465411563278
Q gi|254780595|r    3 LMIFGA-GYTGKFIADAALKVGVYTCGTTRSVSNLLT----LKHKGISP--FLFADQKINNL------LREKLYFTTHIV   69 (289)
Q Consensus         3 IlI~Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~v~   69 (289)
T Consensus         5 alVTGg~~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLV   84 (256)
T PRK08643          5 ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAKAAADKLSSDGGKAIAVKADVSNRDQVFDAVQQVVDTFGDLNVVV   84 (256)
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             99957578899999999998799999996988999999999985399099998058999999999999999829987999


Q ss_pred             EEECCCCCC----------CEEEC-CC------CCHHHHHH-H--CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             761244433----------10001-22------10134432-0--12334333320102576212345321123431134
Q gi|254780595|r   70 QCIKPSSEG----------DPCII-SM------SKDFYKFM-P--HVKWIGYLSSTSIYGNREGQWVDEHSFVHPISCVA  129 (289)
Q Consensus        70 ~~~~~~~~~----------~~~~~-~~------~~~~~~~~-~--~~~~~i~~SS~~VYg~~~g~~i~E~~~~~P~~~y~  129 (289)
T Consensus        85 NnAG~~~~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~~~m~~~~~~G~IVnisS~~~~~~~-----------~~~~~Y~  153 (256)
T PRK08643         85 NNAGLAPTTPIDTITEEQFKKVYGINVGGVIWGIQAAQEQFKKLGHGGKIINATSQAGVEGN-----------PGLSVYG  153 (256)
T ss_pred             ECCCCCCCCCHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHCCCC-----------CCCHHHH
T ss_conf             89988999882559999999999997636899999999999982899279998321013589-----------9848999


Q ss_pred             HHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCC-CHHHHHHCC--CCCCCCC----CCCE-ECCHHHHHHHHHHHH
Q ss_conf             5544555543200123---456764203477778985-034443113--4543222----1100-010247777999999
Q gi|254780595|r  130 TQRFNAEKEWLAITKK---LNIKLAVLRLSGIYGPKR-NPFIKIRQK--NSLRLVK----KNQV-FNRIRVEDVARCVIF  198 (289)
Q Consensus       130 ~~k~~~E~~~~~~~~~---~~~~~~ilR~~~iyGp~r-~~~~~~~~g--~~~~~~~----~~~~-~~~ihv~Dva~~i~~  198 (289)
T Consensus       154 asKaav~~ltkslA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipl~R~g~pedia~~v~f  233 (256)
T PRK08643        154 STKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHEVGENAGKPDEWGMEQFAKDITLKRLSEPEDVANVVSF  233 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf             99999999999999998775918999960668870456677887876289758999999835999998689999999999


Q ss_pred             HHCCCC----CCCEECCCC
Q ss_conf             951355----786162684
Q gi|254780595|r  199 LMTHHL----GGIFNLSDD  213 (289)
Q Consensus       199 l~~~~~----~~iyni~~~  213 (289)
T Consensus       234 L~S~~s~~iTG~~i~VDGG  252 (256)
T PRK08643        234 LAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             HHCCHHCCCCCCEEEECCC
T ss_conf             9593536935875996638