HHsearch alignment for GI: 254780595 and conserved domain: PRK12481
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional.
Probab=98.05 E-value=5.3e-05 Score=48.07 Aligned_cols=193 Identities=13% Similarity=0.053 Sum_probs=102.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHCCC--EEEECCCCCCCH---HH---HHHHCCCCEEEE
Q ss_conf 3999888-8889999999998898899996794463--45564498--289806786402---34---654115632787
Q gi|254780595|r 2 HLMIFGA-GYTGKFIADAALKVGVYTCGTTRSVSNL--LTLKHKGI--SPFLFADQKINN---LL---REKLYFTTHIVQ 70 (289)
Q Consensus 2 kIlI~Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~~--~~~~~~~~~~~~---~~---~~~~~~~~~v~~ 70 (289)
T Consensus 10 valVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVN 89 (251)
T PRK12481 10 VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILIN 89 (251)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 89994867689999999999869999997898719999999975994799991279999999999999998199989998
Q ss_pred EECCCCCCC---EEECCC----CCH----------HHH-HHH--CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 612444331---000122----101----------344-320--123343333201025762123453211234311345
Q gi|254780595|r 71 CIKPSSEGD---PCIISM----SKD----------FYK-FMP--HVKWIGYLSSTSIYGNREGQWVDEHSFVHPISCVAT 130 (289)
Q Consensus 71 ~~~~~~~~~---~~~~~~----~~~----------~~~-~~~--~~~~~i~~SS~~VYg~~~g~~i~E~~~~~P~~~y~~ 130 (289)
T Consensus 90 NAG~~~~~~~~~~~~~~w~~~~~vNl~~~~~~~q~~~~~m~~~~~~G~IVnisS~~~~~--~~---------~~~~~Y~a 158 (251)
T PRK12481 90 NAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ--GG---------IRVPSYTA 158 (251)
T ss_pred CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCC--CC---------CCCCHHHH
T ss_conf 99899999903499999999999983779999999999999856993487402133336--88---------98714799
Q ss_pred HHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCCCHH-------HHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHH
Q ss_conf 544555543200123---456764203477778985034-------4431134543222110001024777799999995
Q gi|254780595|r 131 QRFNAEKEWLAITKK---LNIKLAVLRLSGIYGPKRNPF-------IKIRQKNSLRLVKKNQVFNRIRVEDVARCVIFLM 200 (289)
Q Consensus 131 ~k~~~E~~~~~~~~~---~~~~~~ilR~~~iyGp~r~~~-------~~~~~g~~~~~~~~~~~~~~ihv~Dva~~i~~l~ 200 (289)
T Consensus 159 sKaav~~ltr~lA~e~a~~gIrVN~IaPG~i~T~~~~~~~~~~~~~~~~~~~~Pl----~----R~g~pedia~~v~fL~ 230 (251)
T PRK12481 159 SKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA----S----RWGTPDDLAGPAIFLS 230 (251)
T ss_pred HHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHCCCCHHHHHHHHHCCCC----C----CCCCHHHHHHHHHHHH
T ss_conf 9999999999999997030969999952888777521103799999999955999----9----9868999999999993
Q ss_pred CCCC----CCCEECCCC
Q ss_conf 1355----786162684
Q gi|254780595|r 201 THHL----GGIFNLSDD 213 (289)
Q Consensus 201 ~~~~----~~iyni~~~ 213 (289)
T Consensus 231 S~~a~~iTG~~i~VDGG 247 (251)
T PRK12481 231 SSASDYVTGYTLAVDGG 247 (251)
T ss_pred CCHHCCCCCCEEEECCC
T ss_conf 82535904855897846