HHsearch alignment for GI: 254780595 and conserved domain: TIGR02632
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=97.08 E-value=0.0062 Score=36.26 Aligned_cols=197 Identities=14% Similarity=0.137 Sum_probs=104.4
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-------------------C-CEEEECCCCCCCHHHHH-
Q ss_conf 999888-8889999999998898899996794463455644-------------------9-82898067864023465-
Q gi|254780595|r 3 LMIFGA-GYTGKFIADAALKVGVYTCGTTRSVSNLLTLKHK-------------------G-ISPFLFADQKINNLLRE- 60 (289)
Q Consensus 3 IlI~Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-------------------~-~~~~~~~~~~~~~~~~~- 60 (289)
T Consensus 427 a~VtGGasGIG~~~A~rL~~eGAhvV~aD~d~~~a~~va~~~~~~fG~d~a~AGsdisaCGPaiGl~~-DvT~e~~v~~~ 505 (709)
T TIGR02632 427 AFVTGGASGIGRETARRLVDEGAHVVLADLDAEAAEAVAAEIVDKFGADKAVAGSDISACGPAIGLKL-DVTDEEAVKAA 505 (709)
T ss_pred EEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEECCCCHHCCCCCEEEEE-EECCHHHHHHH
T ss_conf 88973886526899999973697799962365789999999863138881211432000467100276-31758999999
Q ss_pred ------HHCCCCEEEEEEC----CCCCCCE---EECCCCCH------HH-----HHHHC---CCCCCCCCC-EEECCCCC
Q ss_conf ------4115632787612----4443310---00122101------34-----43201---233433332-01025762
Q gi|254780595|r 61 ------KLYFTTHIVQCIK----PSSEGDP---CIISMSKD------FY-----KFMPH---VKWIGYLSS-TSIYGNRE 112 (289)
Q Consensus 61 ------~~~~~~~v~~~~~----~~~~~~~---~~~~~~~~------~~-----~~~~~---~~~~i~~SS-~~VYg~~~ 112 (289)
T Consensus 506 f~~v~~~yGGvD~vv~nAGi~~S~p~~~t~r~~~W~l~~di~atG~FLVareA~r~~~~Q~lGG~~VfiaSkNav~A~k- 584 (709)
T TIGR02632 506 FAEVALAYGGVDIVVNNAGIAVSSPLEETERLEEWDLNLDILATGYFLVAREAARLMRKQGLGGNIVFIASKNAVVAGK- 584 (709)
T ss_pred HHHHHHHHCCEEEEEECCCHHCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECC-
T ss_conf 9999997498478765253010577023221554320120101200358889999997317985567761100011178-
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---CCCCC------CCCCCCCCCCCCCCHHHHHHC-------CCCCC
Q ss_conf 123453211234311345544555543200123---45676------420347777898503444311-------34543
Q gi|254780595|r 113 GQWVDEHSFVHPISCVATQRFNAEKEWLAITKK---LNIKL------AVLRLSGIYGPKRNPFIKIRQ-------KNSLR 176 (289)
Q Consensus 113 g~~i~E~~~~~P~~~y~~~k~~~E~~~~~~~~~---~~~~~------~ilR~~~iyGp~r~~~~~~~~-------g~~~~ 176 (289)
T Consensus 585 -----------n~~AY~aaKA~~~Hl~R~LA~Ela~~GiRVNtV~PdaVl~GS~if~~~W~-~~raA~ygi~ftadePtd 652 (709)
T TIGR02632 585 -----------NASAYSAAKAAEAHLARCLAAELAELGIRVNTVNPDAVLRGSGIFDGEWR-EERAAAYGIPFTADEPTD 652 (709)
T ss_pred -----------CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCCCCCHHHH-HHHHHHHCCCCCCCCCHH
T ss_conf -----------84055589999998999999814788646401065001105521533678-888877077434687235
Q ss_pred CCC---CCCEE--C----CHHHHHHHHHHHHHHCCC----CCCCEECCCC
Q ss_conf 222---11000--1----024777799999995135----5786162684
Q gi|254780595|r 177 LVK---KNQVF--N----RIRVEDVARCVIFLMTHH----LGGIFNLSDD 213 (289)
Q Consensus 177 ~~~---~~~~~--~----~ihv~Dva~~i~~l~~~~----~~~iyni~~~ 213 (289)
T Consensus 653 vl~d~L~~fY~~RslLk~~v~p~d~AeAvf~L~S~~~~~tTG~~i~VDaG 702 (709)
T TIGR02632 653 VLADKLEEFYAKRSLLKREVLPADIAEAVFFLASDKLEKTTGLIITVDAG 702 (709)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCC
T ss_conf 78888988987543237766808899999997345101027866403777