HHsearch alignment for GI: 254780595 and conserved domain: TIGR02815
>TIGR02815 agaS_fam putative sugar isomerase, AgaS family; InterPro: IPR014180 Some members of this protein family are found in genic regions associated with N-acetyl-galactosamine and galactosamine utilisation and are suggested to be isomerases..
Probab=93.34 E-value=0.15 Score=28.37 Aligned_cols=31 Identities=23% Similarity=0.440 Sum_probs=27.1
Q ss_pred CEEEEECCC---HHHHHHHHHHHH-CCCEEEEEEC
Q ss_conf 939998888---889999999998-8988999967
Q gi|254780595|r 1 MHLMIFGAG---YTGKFIADAALK-VGVYTCGTTR 31 (289)
Q Consensus 1 MkIlI~GaG---~iG~~l~~~L~~-~g~~V~~~~r 31 (289)
T Consensus 45 LRIvLTGAGTSAF~G~~l~P~L~~~~G~~V~A~pT 79 (374)
T TIGR02815 45 LRIVLTGAGTSAFIGDALAPWLAKHLGLRVEAVPT 79 (374)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 75898567754779999999999840981588523