HHsearch alignment for GI: 254780595 and conserved domain: TIGR02823
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family; InterPro: IPR014188 This entry represents a subfamily of the alcohol dehydrogenase, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This entry includes YhdH from Escherichia coli and YhfP from Bacillus subtilis both of which bind NADPH or NAD, but not zinc. Both proteins have been studied crystallographically for insight into function. .
Probab=96.42 E-value=0.0067 Score=36.05 Aligned_cols=165 Identities=16% Similarity=0.190 Sum_probs=87.4
Q ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHCCCEEEECCCCCCCHH-HHHHH--CCCCEEEEEECCCC
Q ss_conf 3999888-8889999999998898899996794463-455644982898067864023-46541--15632787612444
Q gi|254780595|r 2 HLMIFGA-GYTGKFIADAALKVGVYTCGTTRSVSNL-LTLKHKGISPFLFADQKINNL-LREKL--YFTTHIVQCIKPSS 76 (289)
Q Consensus 2 kIlI~Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~v~~~~~~~~ 76 (289)
T Consensus 151 pVlVTGAtGGVGS~Av~~L~~lGY~V~A~tGk~~~~~~yL~~LGA~evi~R-~~l~~~a~~kPL~k~~WAGAvDt----- 224 (330)
T TIGR02823 151 PVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEVEYLKELGASEVIDR-EELSEDAPGKPLEKERWAGAVDT----- 224 (330)
T ss_pred CEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCH-HHCCCCCCCCCCCCCCCCCEEEC-----
T ss_conf 788706778778999999983797699973783778899986581105771-12276878886312222215746-----
Q ss_pred CCCEEECCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 33100012210134432012334333320102576212345321123431134554455554320012345676420347
Q gi|254780595|r 77 EGDPCIISMSKDFYKFMPHVKWIGYLSSTSIYGNREGQWVDEHSFVHPISCVATQRFNAEKEWLAITKKLNIKLAVLRLS 156 (289)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~i~~SS~~VYg~~~g~~i~E~~~~~P~~~y~~~k~~~E~~~~~~~~~~~~~~~ilR~~ 156 (289)
T Consensus 225 -------VGG~~La~~---l~~~~ygG~VA~cGlagG~~L~--tTV~PFILRGV~Ll-------------GID------- 272 (330)
T TIGR02823 225 -------VGGKTLANV---LAQLKYGGAVAACGLAGGADLP--TTVLPFILRGVSLL-------------GID------- 272 (330)
T ss_pred -------CCHHHHHHH---HHHHCCCCEEEEEECCCCCCCC--CEECCHHHCCCEEE-------------EEC-------
T ss_conf -------875799999---9840689789999426798635--01255043285388-------------853-------
Q ss_pred CCCCC--CCCHHH-HHHCCCCCCCCCCCCEEC-CHHHHHHHHHHHHHHCCCCCC
Q ss_conf 77789--850344-431134543222110001-024777799999995135578
Q gi|254780595|r 157 GIYGP--KRNPFI-KIRQKNSLRLVKKNQVFN-RIRVEDVARCVIFLMTHHLGG 206 (289)
Q Consensus 157 ~iyGp--~r~~~~-~~~~g~~~~~~~~~~~~~-~ihv~Dva~~i~~l~~~~~~~ 206 (289)
T Consensus 273 SV~~p~~~R~~~W~RLA~dl~~~~--L~~~~~~ei~L~elp~~~~~~l~G~~~G 324 (330)
T TIGR02823 273 SVYCPMALREAAWQRLATDLKPRN--LESLTTQEITLEELPEAAEQILAGQVRG 324 (330)
T ss_pred HHCCCHHHHHHHHHHHHHHCCHHH--HHHHHCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 001887899999998874159778--8878420015776899999997388300