HHsearch alignment for GI: 254780595 and conserved domain: cd01065
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.76 E-value=0.044 Score=31.41 Aligned_cols=71 Identities=18% Similarity=0.119 Sum_probs=47.3
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCEEEEEECCC
Q ss_conf 39998888889999999998898-899996794463455644982898067864023465411563278761244
Q gi|254780595|r 2 HLMIFGAGYTGKFIADAALKVGV-YTCGTTRSVSNLLTLKHKGISPFLFADQKINNLLREKLYFTTHIVQCIKPS 75 (289)
Q Consensus 2 kIlI~GaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 75 (289)
T Consensus 21 ~vlIlGaGGaarai~~aL~~~g~~~I~i~nR~~~r~~~l~~~~~~~~~--~~~-~~~~~~~~~~~dliIN~tp~G 92 (155)
T cd01065 21 KVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGI--AIA-YLDLEELLAEADLIINTTPVG 92 (155)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCC--CEE-ECCHHHHHCCCCEEEECCCCC
T ss_conf 999986758999999999971998228860899999999998501366--401-045344315688798767787