HHsearch alignment for GI: 254780595 and conserved domain: cd01338
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.04 E-value=0.0079 Score=35.67 Aligned_cols=71 Identities=14% Similarity=0.072 Sum_probs=36.9
Q ss_pred CEEEEECC-CHHHHHHHHHHHHC---CC----EEEEEECCHH--HH----HHHHHCCCEEEECCCCCCCHHHHHHHCCCC
Q ss_conf 93999888-88899999999988---98----8999967944--63----455644982898067864023465411563
Q gi|254780595|r 1 MHLMIFGA-GYTGKFIADAALKV---GV----YTCGTTRSVS--NL----LTLKHKGISPFLFADQKINNLLREKLYFTT 66 (289)
Q Consensus 1 MkIlI~Ga-G~iG~~l~~~L~~~---g~----~V~~~~r~~~--~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (289)
T Consensus 3 ~KV~IiGAaG~IG~~la~~la~g~l~g~~~~v~l~L~Di~~~~~~l~G~amDl~~~a~-~~-~~~v~~~~~~~~a~~~aD 80 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAF-PL-LAEIVITDDPNVAFKDAD 80 (322)
T ss_pred EEEEEECCCCHHHHHHHHHHHHCHHCCCCCEEEEEEECCCCCCCCCCEEEEEHHHCCC-CC-CCCEEEECCHHHHHCCCC
T ss_conf 0999989996899999999971113079972699997575756667657744532676-54-587797488789837887
Q ss_pred EEEEEEC
Q ss_conf 2787612
Q gi|254780595|r 67 HIVQCIK 73 (289)
Q Consensus 67 ~v~~~~~ 73 (289)
T Consensus 81 vVvitaG 87 (322)
T cd01338 81 WALLVGA 87 (322)
T ss_pred EEEEECC
T ss_conf 8999368